>input_sequence_55897
--------------------------------------------------------------------------------
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------------------------------------------------TGGGGGTGAGAGGCGTGGTCCACCTGCCCAGC
CGGGCGCCAACTCA----------GG----AGCGGTTGGTATATCTATGAGTGGTGGCCGAGG-------------TCGC
ATCGCATTGCCTCCT-TCCTCCTCCTCCTCCTCCTCCTGCTTCACACGCACGGAAGGCAGAGCGAGAGAGGCGACCCAAC
CGCCCCCTCCGCTGCTTCAGTTCCTCCGCTCCATCCACCCCGTTTCTATTCCCAGTGGACGCCAACACACGCAGGCGCAT
CGCTG----GCTATATTTAGCCATAGCTGAAGAGAGTCTGATTTACGTAGAAGATAGGAGGAGCAGATCTTTGAGGAGAG
AGAGAGAGCATGCCGACGGGAACCATGAGGAGGATGTTCGTCGAGTCG---TCGTCCTCGTCCTCGTCCTCCGGGAGCGG
CAGGCAGGCGGAGGCGACGGTGGTGCTGTGCGCGCCCCGGCCGCGCAGGGTGCACGCCCAGCCATGCAGCGCCGACCTCA
TCCTCGGCCCCCCACCCTTCCTCCTCGACGCCTCCTCCGGCAGCAACAGCAGAAAGGTACCGTCCGTCCTCCCAATCCTC
AACCAGTTCTTGCAAGAAAATTTCCATGTTCTTTTGTTTCTTGGCCTTGATTTTTTTGG--------TGTATGGATATTT
GTCTTACAAGAACCTGTTCTTTGTTATTGCAGCAGAGAGAAGGGAAGAGCAAAACGCGGGAGGTCGACGACGAGTCGGAG
GAGGAGGGGGAGGGGGGCTGGGCGCTGTTCGGCGGCTCGCCGCCGGCGCGCGCGGACAACCCGCTCGTCCACGACCCCCA
CTTCCTGCTCAACCAGCGCCACCACGCCGCCGCCGACTTCAACCTCGCGGCGGTTTTTGACCACCACCTCCACCACCACA
GCCGCACCCACCACCACCACGTCCCA---ACATATAGCAATAGCAGTAGTAACCACAGTTTTGCCCCGTCGTACACGCAC
GCCGCGCCGGCGGTGAGGATCCAGGGGTTCGACGTCGCGGCCTGCCGGGGCTCCCACGGCAGCAACGGCGGAGGCCGCGT
GCTCTCCGCCCGCGCCTGAGCCCCA-GCCCCAGCCCGAGCCGAGCAGAGCCGACCCGCAAGGGGGAAGCCACCCACCGCC
GTCGTCCTCACCGACCTTGTACAGTTTTCCGCCGGCCGCCGCGTATGTACGTACGTACCTACGTCTAGCGTACTACTAGC
AGTATCACCATATGCTACGTGTGTTCCTTGTGGTATATACATACATACATACATACATACATACGGGTTTACGTGATGAA
TTAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr3A_1_TraesCS3A01G446500
GGTCCCGGTAGGACTGCGCCCGACCGACGGCGTGACATGTCCAGCATGAGTCCATTGCGTCGGGCATCGGACGCTCGAAT
CCTCGTGCGTTGGATCATTGCGGTTCTCCCGGAAGCCTTCCAATCTTCCTTTCCCCATCACCGGTCCATTAGAGCATGAG
TGCTACCGGGACCGGTGTGCCTGCCGTGGGAAGGAGAGGATGAGAGTGGCTGAGGCCTGTCTCGCTGCCGATCGACATGG
ACGCGGCTGCACGTGCTGATGGCATATCCTGATTCAGTAGCCGAACAGTGTGCATTGCGTCGTTTACGTAGTTGCATGCT
TTATACTATGGATTTAAGGTATGCTAATTTAAGTGTCCGGCCGTGAGAAGAGAAATTAGAGGTGTGATCAGTCTCCGGAG
TTCGAGGGACCGGATTTGCCAAGTACGGGTGCAGATGCTCTAAGCCGTTTTAGATCACTTAAAATTTTCAGTTGTGAAGT
GAAAAAAAAACCGATCCAGCAAGAAAATCCATGAAAAGTTTTGTTAAAAAAGAATCCATGAAACTTATCTATTACTCCTA
TAGACACAATAACACGCAGAGTCAACTGGTATCATATCATCAATCCCCTAAAAACACTGGTATCATATCATCACGTACAT
ATTTCGTGATGTTAACACACACACACACACACAAATCAAA-CAGGAGAAGTCGCACGCCCGTGATAACGATTTGATGCCC
CCGGCATTTGTTCGAAGCAA---------------------AAAAAATCGGGCTGGGCTGGGTTGGGTTGGGTTCCGCGG
GGAACAATCTGGAGACACGGCACAAGTTGCGTTGGCGCGGCGCACGTGATCGGCCAGGCACCTCATGTGCGC--------
--GCGG------------CTTCCACCT------------------------------------CCACTGCCGCTCGACAC
CGATCGTG------AAGCAACCGCGCCAGCGTCGCCACCACTACTGGCCTACCGCCAGCGTCTCGCGCCTAC--------
----------CCTCCAAAAAATAAAAAATAAAAATA--------------------------------------------
--------------------AAAATGGAGGCAGAGAAAAATAATGCGCTGGGGGTGAGAGGCGTGGTCCACCTGCCCAGC
CGGGCGCCAACTCA----------GG----AGCGGTTGGTATATCTATGAGTGGTGGCCGAGG-------------TCGC
ATCGCATTGCCTCCT-TCCTCCTCCTCCTCCTCCTCCTGCTTCACACGCACGGAAGGCAGAGCGAGAGAGGCGACCCAAC
CGCCCCCTCCGCTGCTTCAGTTCCTCCGCTCCATCCACCCCGTTTCTATTCCCAGTGGACGCCAACACACGCAGGCGCAT
CGCTG----GCTATATTTAGCCATAGCTGAAGAGAGTCTGATTTACGTAGAAGATAGGAGGAGCAGATCTTTGAGGAGAG
AGAGAGAGCATGCCGACGGGAACCATGAGGAGGATGTTCGTCGAGTCG---TCGTCCTCGTCCTCGTCCTCCGGGAGCGG
CAGGCAGGCGGAGGCGACGGTGGTGCTGTGCGCGCCCCGGCCGCGCAGGGTGCACGCCCAGCCATGCAGCGCCGACCTCA
TCCTCGGCCCCCCACCCTTCCTCCTCGACGCCTCCTCCGGCAGCAACAGCAGAAAGGTACCGTCCGTCCTCCCAATCCTC
AACCAGTTCTTGCAAGAAAATTTCCATGTTCTTTTGTTTCTTGGCCTTGATTTTTTTGG--------TGTATGGATATTT
GTCTTACAAGAACCTGTTCTTTGTTATTGCAGCAGAGAGAAGGGAAGAGCAAAACGCGGGAGGTCGACGACGAGTCGGAG
GAGGAGGGGGAGGGGGGCTGGGCGCTGTTCGGCGGCTCGCCGCCGGCGCGCGCGGACAACCCGCTCGTCCACGACCCCCA
CTTCCTGCTCAACCAGCGCCACCACGCCGCCGCCGACTTCAACCTCGCGGCGGTTTTTGACCACCACCTCCACCACCACA
GCCGCACCCACCACCACCACGTCCCA---ACATATAGCAATAGCAGTAGTAACCACAGTTTTGCCCCGTCGTACACGCAC
GCCGCGCCGGCGGTGAGGATCCAGGGGTTCGACGTCGCGGCCTGCCGGGGCTCCCACGGCAGCAACGGCGGAGGCCGCGT
GCTCTCCGCCCGCGCCTGAGCCCCA-GCCCCAGCCCGAGCCGAGCAGAGCCGACCCGCAAGGGGGAAGCCACCCACCGCC
GTCGTCCTCACCGACCTTGTACAGTTTTCCGCCGGCCGCCGCGTATGTACGTACGTACCTACGTCTAGCGTACTACTAGC
AGTATCACCATATGCTACGTGTGTTCCTTGTGGTATATACATACATACATACATACATACATACGGGTTTACGTGATGAA
TTAACATGAGATGGGTAGCCAGGGTCGTCTAAAGACTAAGTAAGGTTAATTAAGAGTAGTAGAAGAAGAATGATCATCAT
CAGCAGCATACACAAAGAGGATCGATCTTATCAAAGAGAGGATTTCTATTTGTACCTTTTTTTCG--AGTTAGTTTTGTC
AGGAGGTGATGTGTAGATATCATGAGTGTTAATCTTGTTCTAAGAAGGGTCTTT----------CCGGATGAAGATGG-A
GATGGCCCTTGCAGTTGTGCCGGGCCATCGTCGTGTTCATCTCACCACCGCCATGTAACCATGGTTGTACTTGTAAAAAA
GAG----GATGGAAGGAAGGATGAAGAAAGTGTGTACATACATAAACTTGTTGGTTATGCAGCTGTACCATGTAATCGAA
TTGCAT-AAGTTGATTCAATAACCTCTCCCGAGT--TTTGCCCCCTTGTTTCATATTCAGATATTTCTTCCTGTCGCCTT
TGGTGTGTGTGTGTGTGTGTGTTGGGAACCTCGGATGCA-----AGAGAGAGGCCTTTTGTTTTCTTTGCCGTTGCCAAA
GTTTGTGGCGGTGGTTGT--------------------------------------------------------------
------GTAGTACAGTGAGATGAGATCGGATCAAATCCCAGGAT---TCCATCCCGTCCTGGCC-----CCCGGTTGTGG
ACGGGGTGAGCTGTTGGC--------CCCCGATTTTCCCCGGGCAGAGGCAGA----------------TGCACATGCGA
GATGCGACTTTTCGACGCGAGCTGCCGCTGCCCCGTTGCTTCCCCGGACGGCAAAGGCCGGGCAAGT-------------
--AGACAGGCCGCGTCATTGACCTCACCT--------CACCTCTCGAGTGGGGGTATCGTGGCGTGGCGGCCTCTTTCCC
ACCATCGAC---------CGTCCATCCGTTGGTTCCACGGGCGCGGACCGCGACCCCGTCCGGCCCGTGCGTGCGTGCGA
GCGACGGGCACGCAACCACGTAGCCGCCTTCGCCCCC-TGGCCTCTGCCGTCCGCCTTTTTTTTCTACTCCCTCCCGAAC
AAATTCACCCATCACGGGGCCCGCGCCCTCGCGTTCGCCGAC
>chr3D_616
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------ACTAGTATCATATCATCACAAGCAT
ATTTCTTTCTTGATGCTA----ACACACGCACAAATCAAAACAGGAGAGGTCGCACCCCCGCGATAACGATTTGATGCCC
CTGGCCAAATATCATCACAAGCATAGCATATTGCTGGAAGGAAGAAATCGGGG-----TGGGCTGGGTTGGGTTCCGCGG
GGAACAATCTGGAGACACGGCGCACGT--------------------GAACGGCCAGGCACATCATGTGCGTGCGGTGCG
GTGCGGGACGGCTTCCAGCTCCATTGCCGCTAGAAAAAAAATAATTATTTTTCGATTTGAGTACCACTGGTGCTGGACAC
CGATCGCCAACGCCAAGCAACCGCGCCAACGTCGCCACCACTACTGGCCTACCGCCAACGTTTCGCGCCTAGGGTAGCCA
GCAGGAAGGCGGTGCGCAATAAATAAATTTATTATACGAACGGGCCCCCTTTCGCAAAAATAAAAAATAA----------
--------------------AAAATGGAGGCAGAGAAAAATAATGCGATGGGGGCGAGAGACGTGGTCCACCTGCCCAGC
CGGGCGCCAACTCA----------GGCGGGAGCGGTTGGTATATC----AGTGGTGGCCGAGGCGGTCAGCACCGCTCGC
ATCGCATTGCCGCGCCTTCCCTTCATTCCCACCCGCCTACTTCACGCGCA-------------------------CCAAC
CACCCCCTCCGCTGCTTCAGTTCGTCCGCTCCATCCATCCCGTTTCTATTCCGAGTGGACGCCAGGCGCATAGGTATATT
TG-----------------------GCTGTAGAGAGCCTGATT----TAGAAGATAGGAGGAGCACATCTTTGAGAGGGA
G----GAGCATGCCGACGGGAACCATGAGGAGGATGTTCGTCGAG---------TCGTCCTCGTCCTCCTCCGGGAGCGG
CAGGGAGGCGGAGCCGGCGGTGGTGCTGTGCGCGCCCCGGCCCCGCAGGGTCCACGCCCAGCCCTGCAGCGCCGACCTCA
TCCTCGGCCCCCCGCCCTTCCTGCTCAACGCCTCCTCCGGCAGCAT------AAAGGTACCGTCCGTCCTCCCGATTCCC
AACCACTTCTTGGAAGAAAATTTCCATGCTCTTTTGTTTCTTGGCAGAGATCTGCTCTCGA-------------ATTTTT
GTCTTACAAGAATCT---CTTTCTTATTGCAGCAGAGACAAGGGAAGAGCAAAACGCG------------------GGAG
GAGGAGGGGGAGGGGGGCTGGGCGCTGTTCGGCGGCTCGCCGCCGGCGCGCGCGGACAACCCGCTCGTCCACGACCCCCA
CTTCCTGCTCAACCAGCGCCACCACGCCGCCGCGGAATTCAACCTCGCGGCGGTTTTTGACCACCACCTCCACCACCACA
GCCGCA---ACCACCACCACGCCCCAACCACATATAGCAATAGCGGCAATAGCCACAGTTTTGCCCCGTCGTACACGCAC
GCCGCGCCGGCGGTGAGGATCCAGGGGTTCGACGTCGCCGCCTGCCGGGGCTCCCACGCCAGCAACGGCGGAGGCCGCGT
GCTCTCCGCCCGCGCATGAGCCTGA-GCCCTGCGGAATTGCAT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CATGTTGGTTATGCAGCTGTACCATGTAATGGAA
TTGCATCAAGTTGATTCAATAATTTCTCCTGAGT--TTTGCACCCTTGTTTCAGA-TCAGAAACTCCTTCATGTTGCCTT
TGGTGTGTGTGTGTTGTGGGGAACCT--CCTCAGATGCA-----AGGGAAA--CCTTTTGTTTTGCTTGTTGTTGCCAAG
GTTTCGGGCGATGGATTCGAGCAAACAGGCAGCAATCAGGGCGGGGAGGTGCGGTCCTGCCGGCGGTGGTTGCGAGTA--
------GTAGTACAGTGAGATGAGATGGGATGAAATCCCATGAT---TCCATCTCGTCCTTGGCCTGGTCCCGGGCACGG
CCAGGGTGAGCTGTTGGTTGGTTCGACCCCGATTTTCCCCGGGCAG--GCAGA----------------TGCACATGCGA
GATGCGACTTTTGGACGCGAGCTGCCGCTGCCCCGTTGCTTCCCCGGACGGCAAAGGGTGGGAAACGCCGTAGCAAGTAG
ACAGAGAGGCCGCGTCATTGACCGCCTCCCTCTCGCCCACCTCTCAAGTGGGGGCATCGTGGCGTGGCGGCCTCTTTCCT
CGCGTCGTTCCCATCCATCGTCCATCCGTTCGTTCCACGGGCGCGGACCGCGACCCGTTCGTTCGCTCGCCCGTCTC---
-------GCACGCAACCACGTAGCCGCCTTGGTCCACTTGGCCTCTGCCGTCCGC-------------------------
------------------------------------------
>chr3B_758
GGGTTCGGTTTGATTC----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CCACGG
GGAACAATCTGGAGACACGGCACAAGTTGCGTTGGCGCGGC----------------GCACCTCATGTGCGC--------
--GCGGGACGGCCTCCGGCTCCCACCT------------------------------------CCACTGGCGCTGGACAC
CGATCGTG------AAGCAACCGCGCCAGCGTCGCCACCACTACTGGCCTACCGCCAACGTTTCGCGCCTAG--------
----------GGTGCGCAATAAATAAATTTATTATGCGAGTGGCCCACTCGTCAGAAGAAAAATAATAGCGCCCCGTACT
AATAATAATCCCGGCAAAAGAAAATGGGGCCAGAGAAAAATAATGCGATGGGGACGAGAGACGTGGTCCACCTGCCCAGC
CGGGCGCCAACTCAGGGGCCGAGGGGCGGGAGCGGTTGGTATATC----AGTGGTGGCCGAGGCGGTCA---------GC
ACCGCATTGCCGCGCCTCCT--------TCCTCCTCCTACTTCACACGCACGGAAGGCA----GAGAGAGGCGACCCAAC
CGCCCCCTCCGCTGCTTCAGTTCGTCCGCTCCATC----CCGTGTCTATTCCGAGTGGACGCCAACACACACAGGCGCAT
ATATAGGTAGCTTTATTTAGCTACGGCTGAAGAGAGCCTGATT----TACAAGATAGGAGGAGCAGATCTTTGAGGAG--
G----GAGCATGCCGACGGGAACCATGAGGAGGATGTTCGTCGAGTCGTCCTCGTCCTCGTCCTCGTCGTCCGGGAGCGG
CAGGGAGGCGGAGCCGGCGGTGGTGCTGTGCGCGCCTCGCCCGCGCAGGGTCCACGCCCAGCCCTGCAGCGCCGACCTCA
TCCTCGGCCCTCCCCCCTTCCTCCTCAACGCCTCCTCCGCCAACAACAGAAAGGTACACACCGGCCGTCTCCCGACTCTC
AACCAGTTCTTGGAAGAAAATTTTCATGTTCTTCTATTTCTTGGCAAACAAATATCTTCTTGAATTTTGTATGGATCTTT
GTCTTACAAGAATCTGTTCTTTCTTATTGCAGCAGAGAGAAGGGAAGAGCAAAACGCGGGAGGAG---GACGAGTCGGAG
GAGGAGGGGGAGGGGGGCTGGGCGCTGTTCGGCGGCTCGCCGCCGGCGCGCGCGGACAACCCGCTCGTCCACGACCCCCA
CTTCCTGCTCAACCAGCGAAACCACGCCGCCGCCGACTTCAACCTCGCGGCGGTTTTTGACCACCACCTCCACCACCACA
GCCGCGCCCACCACCACCACATCCCCACCACATATAGCAATAGC---AATAGCCACAGTTTTGCCCCGTCGTACACGCAC
GCCGCGCCGGCGGTGAGGATCCAGGGGTTCGACGTCGCCGCCTGCCGGGGCTCCCACGGCAGCAACGGCGGAGGCCGCGT
GCTCTCCGCCCGCGCCTGAAGCCTGGGCCTCAGCCTGAGCCGAGCAGAGCCCACCCGCAAGGGAGAAGCCACCCACCGCC
GTCGTCCTCACCAACCTTGTACAGTTTTCCGCCGGCCGCCGCGTATGTACGTACGTAC-TACGTCTAGTGTACTGGT---
AGTATCACGATATGCTACGTGTGTTCCTTGTGGTATATAC----------------ATACATACGGGTTTACGTGATGAA
TTAACATGAGATGGGTAGCGAGGGTCGTCTAAAGACTAAGTAAGTTTAATTAAGAGTAGTAGAAGAAGAATGATCATCAG
CAGCAGCATACACAAAGAGGATCGATCA----AAGGAGAGGATTTCTATTTTTACTTCTTTTTCCCCAGTTAGTTTTGTC
AGGAAGTGTTCTGTAGATATCATGAGTGTTAATCTT-TTCTAAGAAGGGTCGGTCTTTTCTTCCCCGGATGAAGACGAAA
GATGGCCTGTGCAGTTGTGCTGGGCCATCGTCGTGTTCATCG---CACCGCCATGTAACCATGGTTGTATTTGTAAAGAA
GAGAATGGAAGGAAGGAAGAAAGAAGAAAGTGTGTACATACATAAACATGTTTGTTATGGAGCTGTACCATGTAATGGAA
TTGCATCAAGTTGATTCAAACAGTCTCTCATCTGCGTTTGCCCCCTTGTT------TCAGAAACTCTTTCCTGTTGCCTT
CGGTGTGTGTGTGTGTGTGTGTGTTGGGCAGTTGAGATCAAGGGAGGGAAT--CCGTTTGGTCTCATTGTTGTAACAATT
TTTTTTGGCGAAGGGTTCGAGCAAATAGGCTGCAATCAGGCCGGGGAG-------------GGCGGTGGTTGCGAGAGAG
CAGTACGTAGTACAGTGAGATGAGATCGGATCAAATCCCATGATGATTCCATCTTGTCCTTCTCCTGGTCCCGG--ACGG
CCAGGGTGAGCTGTTAGTTGGTTCGGCCCCGATTTTCCCCGGGCAG--GCACGCAGATGCACATGCACTTGCACATGCGA
GATGCGACTTTTCGACGCGACCTGCCGCTGCCCCGTTGCTTCCCCGGACGGCAAAGGCCGAGCAAGT-------------
--AGACAGGCCGCGTCATTGACC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
--SSS----SS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---------------SSS---
-----S-SS-SSSSS-SSSSSS------S-------------------S-------S----S------------------
-S---SSSSSS--SSSS--------------------------S--------SSSSSS----S-----------------
-----------------------------------------SSSSSS--S------------------------------
--------------------S------------------------------------------------S----S-----
---------------------------------------------------------S---S---------S--------
----------SS-S-SS--S-S-S---S-S-SS-----------------------------------------------
-----------------------------------------------S------S-----S-------------------
---------------------------------------------SSSS-------------------------------
-----------S-SS------S--S-S-----------S--------------------SSSS-----------------
-----------------------S-------------S--------------S-----------------S---------
S-S-S-------S--------S-SS-----------S------SSSS-------------------------------SS
SSSSS---------------------------------------------------------------------------
----S--------S--S----------------------------------S-----------S----------------
-------------S------------S----------------------S-S---------------------S--S---
------------S--------------------------------SSS---S-S---SS-----------------S---
------------S---------S----------------------------------------SSSSS------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-S-S--S----------------------------
--------------------------------------S-----------------------------------------
-----------------------S-----------S---------------S-----------S----------------
------------S---------------------------------------------S---------S-----SS-SSS
--------S-------------------------------SSSSSSSSSSSSSSSS------------------------
-------------------S------------------------S----------------------------------S
---------------------------SSSSS--S----------------S---S-S------S---------------
----S---S-S-------------------------S--------------SS----------------------S-S--
-------SS-----------S--------------------SSSS------------------------S-------S--
---------S---------S-S-------------------------S----------------------------S---
----------------------SS-----S-----------------------S-S-----S-S-S--------S-----
----------------------SSS-SS----S-------------S--S-SS------------S---SS--------S
----S-----S---S-SS--------------------------------------------------------------
----------------------------------------S------------S------S-S-----------SSSS--
S-S--------------S----------------------------SS--------------------------------
--------------------------------------------------------------------------------
-----------------------S-SS-S----------------S--------S------------------------S
SS-S---SS---------------------S-------------------------SS--SSS-S-SS--SS-SS-SSSS
SSSSSSS-----------------------S-S--S-------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_425
--------------------------------------------------------------------------------
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-----GGGACCGGATTTGCCAAGTA-------------------------------------------------------
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>reverse_1730
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------CAGAAAGGTACCGTCCGTCC-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------
>forward_440
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AAGTACGGGTGCAGATGCTC----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_1732
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------GAAAGGTACCGTCCGTCCTC---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>forward_444
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ACGGGTGCAGATGCTCTAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>reverse_2129
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------GTAACCACAGTTTTGCCCCG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_590
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------AACACGCAGAGTCAACTGGT--------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2718
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GAG
ATGGCCCTTGCAGTTGT---------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
