>input_sequence_55871
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----------------------------------------------------------------------------CACA
ACATCAGCTGCCCGAAAGACTGGCCGGTGGCGGGGAGACTGCCGCAGTGGGTCTGTTCTTTGCCAGACAGTGCCTTCATC
CCGGCGCCAGGCCGGCCGGAAGCGAGAAGACATGGAGGAGGCGCCCGTGACGGCAGCCACGGGGGTCTTGGGGCCCGTCG
TAGAGAAGCTGGCTGCTCTGCTTGGCAGTGAGTACAAGCTTCGGCGCCAGACTCGACGCGACATCAACTTCATCAGATCC
TATGGGCAATATGGGAGAGCGAGGATCTTGATGTGGCAACCAAGGAGTTGAAGATGGAAGTGTTGTATCTCGCTGATGAT
ATGGACGATGCCATCGACGACTTCATCCACAGCATGGAGAGTTGGAAGAAGGCTAATGGGTGCTCCCGCTCCATAGAGGC
CAACACCCAGACAAGCCCTTTCCAAGATCTGAAGAAAAGAGCCATTGATGTGTCTGAGCAGTTCCACAACAAGTGGAAGA
CCAAAGCTACGTGCAGTTTATTTTCAAGGAAAAATTCCGTCTCAGGCACCAGCAAGCCGAAGCCCCGGGCTCCCTTTGTC
CTCGCCGATAAGTCACAACTTGTTGGTATGGACGTGCCAAGGGATAGGCTCATCAAACACCTGGTAGGAGGAGAGGAGAG
CACACATATCAAAATGGCATCCATTGTTGGAATGGCCGGCATGGGGAAAACAACCCTTGCCCGCCTTGTGTACGAGGCGA
TTGAAAACAAGTTCCAGGCCTGGGCTTTTGTGTCAGTCAATCCAGGAGGTAACATCAAGGATGTTCTCACAAGTATTCTC
CAACAAGTGGGAGCTGTACTGCCCTCTCGCGCCCGTACAGAGAAGTGCCTCATCAACACCATATCAGAGTTCCTCAAGGA
GAAAAGATGAGCAAAGTTTATAGCTTGAAGTTGAAGTTGCTTTTACGTGCACGTGTTGTGTGCATTTTCATTTTTGTGCT
AAATAACAACACTGAAAGATATATGCAAGTGTTTTGCTGTTGCTCCTCCAAAATCTAACTAAACCTCATG-TTTCCTCAT
ATTGCTGAACAATTTTAGCACTAAAAAAAGGTAAATATAAGACTATTTATGGTGTGTGTTCTATAATGTTGAAGTTAAAA
TTTTTACTTAACTAAAATTGTAAACATGGTAATATCTCCACTGCTGCCTGGCCAATTAGTAAAATTTAATGAAATTATAA
TTAAACTAGTCAGCAACCCGTGCGGATGCACGGGCTAGTTTGATATTCAATAACATTTTTATTTTAAA------------
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-------------------------
>chr7D_1_TraesCS7D01G054300
AGCGGCTCGGGCGAGAAGGGTGTTTTTTTCTTCTCCGATTGTTTTGTTCTTGTGTGAGAGAACTGTTCTTTCACGTTTTT
TATACATTTTACTCGGCATTCTCTTCATTTTCTAACTTCTCGACAAAAGGAACTCGGCAAAAAAGTTGGCAGTATGAAAA
TTTGTTTATTCTAGTAGTGATTATGTAGCACTTTTATTTGTTGCAGGGTATATTTGTAGCACTTGTGTATTCAAAATTTC
CAATTGCTTAACCATTGTTCCTCGTGAACTATATATTTGATAATCCAAGGACAAATTGTAATCCTTAATCACTGCGTACA
GCTCAACAGCCAACAACCCGAACTAACATATCATGCATGGACTTTGCAGCCGCCCATCTCCTAATATGCCCACAGCTAAC
GACAGATCTCTACAAATTTGTGGCACAACTTGGCAATTAATACCAGATCCGTGACTTTATGCGAGCTGGACGCCTGGACG
GCTATGGGCGCGCAGATTCCCCTGTTATCTTAAGGTAGGGTGATTGGGTATGGAGTTGGCCATCATTGGCAACTAATCCT
ATCACCAAAACAATTAGTTCCAGACAAGCTGTAATATATGGCTAATGGCCTACGTCCACGGTTCGACGCTCTGGACGCGA
ATAAACCCTCGTGTCCTTTGCCTTCTTTCTGGTGTAACATCTCCGCATAATGAGCCAATAATTGAGAGCTTTGCCTGTCT
TTTATATTGGCTGTACCTAACGAACACTTTACATGTGGGGCGCATATGCGTCCATCCCGCATGCAGTATTATTATTTTTG
CTAACCACAAGGAGTCGAGCAACCCAACGGACAGGACTCCG-------------------------CCACATCATTGTAG
A----GAGGAGCATATTTGATGGGTTAGATGGCAAGAAACGGAGATAAGTTAATCTCAATAAC---CTGGCCGGTCTGTT
TATGATTATCATCCCAAGTTATCATTTCGAAGTCCACACCCGAGCTCCACCCACCCAC----ACCTCGACACAGCTCACA
ACATCAGCTGCCCGAAAGACTGGCCGGTGGCGGGGAGACTGCCGCAGTGGGTCTGTTCTTTGCCAGACAGTGCCTTCATC
CCGGCGCCAGGCCGGCCGGAAGCGAGAAGACATGGAGGAGGCGCCCGTGACGGCAGCCACGGGGGTCTTGGGGCCCGTCG
TAGAGAAGCTGGCTGCTCTGCTTGGCAGTGAGTACAAGCTTCGGCGCCAGACTCGACGCGACATCAACTTCATCAGATCC
TATGGGCAATATGGGAGAGCGAGGATCTTGATGTGGCAACCAAGGAGTTGAAGATGGAAGTGTTGTATCTCGCTGATGAT
ATGGACGATGCCATCGACGACTTCATCCACAGCATGGAGAGTTGGAAGAAGGCTAATGGGTGCTCCCGCTCCATAGAGGC
CAACACCCAGACAAGCCCTTTCCAAGATCTGAAGAAAAGAGCCATTGATGTGTCTGAGCAGTTCCACAACAAGTGGAAGA
CCAAAGCTACGTGCAGTTTATTTTCAAGGAAAAATTCCGTCTCAGGCACCAGCAAGCCGAAGCCCCGGGCTCCCTTTGTC
CTCGCCGATAAGTCACAACTTGTTGGTATGGACGTGCCAAGGGATAGGCTCATCAAACACCTGGTAGGAGGAGAGGAGAG
CACACATATCAAAATGGCATCCATTGTTGGAATGGCCGGCATGGGGAAAACAACCCTTGCCCGCCTTGTGTACGAGGCGA
TTGAAAACAAGTTCCAGGCCTGGGCTTTTGTGTCAGTCAATCCAGGAGGTAACATCAAGGATGTTCTCACAAGTATTCTC
CAACAAGTGGGAGCTGTACTGCCCTCTCGCGCCCGTACAGAGAAGTGCCTCATCAACACCATATCAGAGTTCCTCAAGGA
GAAAAGATGAGCAAAGTTTATAGCTTGAAGTTGAAGTTGCTTTTACGTGCACGTGTTGTGTGCATTTTCATTTTTGTGCT
AAATAACAACACTGAAAGATATATGCAAGTGTTTTGCTGTTGCTCCTCCAAAATCTAACTAAACCTCATG-TTTCCTCAT
ATTGCTGAACAATTTTAGCACTAAAAAAAGGTAAATATAAGACTATTTATGGTGTGTGTTCTATAATGTTGAAGTTAAAA
TTTTTACTTAACTAAAATTGTAAACATGGTAATATCTCCACTGCTGCCTGGCCAATTAGTAAAATTTAATGAAATTATAA
TTAAACTAGTCAGCAACCCGTGCGGATGCACGGGCTAGTTTGATATTCAATAACATTTTTATTTTAAATGTTTTATGACT
TTATTGCCAAGTGAGAATATAATTTATAGTTACCTTTTCAAAAAGATGTAATTGTTTTCTCATTGATATTCGAACAACAA
CAAAAGAAGTAAAATTCATGTCCACGTGTTTTTGCTTTATAGCT--TAAAGGAATGAAAATTGTGACAGTATATGCACAT
GTGCTCTGCCCGGCCAGCGTTACCTTGAAGTGATACATTCTGGAGTGAACCATATACAAACCAACTTAACTAATTAACAC
AA-------ATTTGATATGGGCAAGTGTAAGTTCC-TTTTTT-TAACTTAACTTCCTTGTCCAAGTTAATTGAGTTGGGA
AACTATTTTGCCTGGTATAGATGGTA--------TAGGAGTTTTTTGCCTGATATGTTTTCACTGATTTTTATGCCAAGG
ACCAGGTTCGAATTTAA------------------------GCGCACAAAATTTCAAGAACCATTGAACTTTGTAGTATT
TGGTGACA-TGTATAAGATGAAACCCTTGATCACATGAAAAGGATTACACCACGTAGTCTAATCTATGTTATAAGAATTT
AAAGTACAACACATTTCCCAACTGGATGTATCATTCGACACAGTA----ATAAGAAAATATGATTGACAATCGACGTGCT
AGCTTCCTGTCCATTGTTTTATATCAGTTAG---TTTTTTACAATAATATCTATTCAGGCCAGATAAG------------
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-----------------------------------------------------------------------------ACA
AAAGCTGATCACCACGTA----------CATGTAACCTGCTGCAATGATCGATTTCTTCGGACCAAGTAAATAAATATGT
TGTCAGTTT-GTCCTCAGCAGCAAATTGAGTTTTTCTTTGCAGCAGACAAAGTGATCTACAATCATAAAAAAGCCGCCAA
GTAAATCTATTTTTGTTACCAGTTTTGCCATCGGCAGCAAATGGAG-----CTTGCAGCAGACAAAGTCGTATGAGATCT
GAAAAATAGAACCAATTATCTATTGCTGAACATAACTTTAATTTGGATTGCTTACAGACAAAA-AAAATTGAGAACTGAA
AAACAGAAGGAAAATCACATTATTT
>chrUn_275
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----------------------------------ATTTGGTAATCCAAGGACAAATTGTAATCCTTAATCACTTCATACA
GCTCAACAGCCAACAACCCGAACTAACATATGATGCATGTACTTTGCAGCCGCCCATCTCCTAATATGTCCGCAGCTAAC
GACAGATCTCTGCAAATT-GTGGCACAGCTTGGCAATTAATAGCAGATCCGTGACTTTATGCTAG--------CTGGACA
GCAATGCGCGTGCAGATTCCCCTGTTATCTTAAGGTAGGGTGGTTGGATATTGAGTTGGCAACTA-------------CT
GTCACCAAAACAAGTAGCTCCAGACAAGCTGTAATATATGGCTTATGGCCTACGTCCAAGGTTGGACGCTCTGGACGCGA
ATAAACCCTCGTGTCCTTTGCCTTCTTTCTAGTATAACATCTCCGCAAACTGAGCCAATAATTGGGCGCTTTGCTTGTTT
TTTATATGAGCTGTACCTAACGAACACTTTACAAGAAGTAGGTGGGG----------CGCATGCAGTATTATTATTTTTG
CTAATCACAAGGAGTCGAGCAACCCGACGGACTGGACTCTAGCGCTTATTCTTCTGCCGTCCTCCACCACATCATTGTAG
ATCGAGAGGAGCATATTTGATGGGTTAGATGGCAAGAAACGCAGATAAGTTGATCTCAATAACCAGCTGGCCGGTCTGTT
TATGATTATCATCCCAGATTACCATTTCGAAGTCCACACCCGAGCTCCACCCACCCACCCATACCCCGACACAGCTCACA
ACATCCGCTGCCCGAGAGA-------------------------------------------------------------
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-------------------------
>chrUn_275
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----------------------------------ATTTGGTAATCCAAGGACAAATTGTAATCCTTAATCACTTCATACA
GCTCAACAGCCAACAACCCGAACTAACATATGATGCATGTACTTTGCAGCCGCCCATCTCCTAATATGTCCGCAGCTAAC
GACAGATCTCTGCAAATT-GTGGCACAGCTTGGCAATTAATAGCAGATCCGTGACTTTATGCTAG--------CTGGACA
GCAATGCGCGTGCAGATTCCCCTGTTATCTTAAGGTAGGGTGGTTGGATATTGAGTTGGCAACTA-------------CT
GTCACCAAAACAAGTAGCTCCAGACAAGCTGTAATATATGGCTTATGGCCTACGTCCAAGGTTGGACGCTCTGGACGCGA
ATAAACCCTCGTGTCCTTTGCCTTCTTTCTAGTATAACATCTCCGCAAACTGAGCCAATAATTGGGCGCTTTGCTTGTTT
TTTATATGAGCTGTACCTAACGAACACTTTACAAGAAGTAGGTGGGG----------CGCATGCAGTATTATTATTTTTG
CTAATCACAAGGAGTCGAGCAACCCGACGGACTGGACTCTAGCGCTTATTCTTCTGCCGTCCTCCACCACATCATTGTAG
ATCGAGAGGAGCATATTTGATGGGTTAGATGGCAAGAAACGCAGATAAGTTGATCTCAATAACCAGCTGGCCGGTCTGTT
TATGATTATCATCCCAGATTACCATTTCGAAGTCCACACCCGAGCTCCACCCACCCACCCATACCCCGACACAGCTCACA
ACATCCGCTGCCCGAGAGA-------------------------------------------------------------
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-------------------------
>chrUn_1369
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--------------------------------------------GAAGAACATTACTGGGCGCTCCCGATCAATACAGGT
GAACAACCAGACAAGCCCTTTCCAAGATCTGAAGAAAAGTGCCAGTGATGTGTCTGAGCAGTTCCGTAACAACTGGAAGA
CCAAAGCTGCATGCAGCTTATTTTCAAGAAAAAATGGCGTCTCCAGCACTAGCAAGCCGAAGCCCCGGGCACCCTTTGTC
CTCGCCAATAAGTCACAGCTCGTTGGTATGGACGGGCCAAGGGATATGCTCATCAAGCACCTGGTAGGAGGAGAGGAGAG
CGCACAGATCAAAATGGCATCCATTGTTGGAATGGCCGGCATGGGGAAAACAACCCTTGCCCGCCTTGTGTATGACGCGA
TTGGAAACAAGTTCCAGGCCCGGGCTTTTGTGTCAGTCAATCCAGGAGGTAACATAAAGGACGTTCTCACAAGTATTCTC
CAACAAATAGGAGCTGTACTGCCCTCTCGCGCAAGTACAGAGAAGTGCCTCATCAACACCATATCAGAGTTCCTCAAGGA
GAAAAGGTGAGCAAAATTTATAGCTTGAAGTTGAACTTCCTTTTACGTGTACGTGTTGTGTGCATTTTAATTTTTGTGTT
ACAAAACAACACTGAGAGATATATGCAAGTGTTTTGCTGTTGCTCCTCCAAAATCTAACTAAACCTCTTGTTTTCCTCAT
ATTGCTGAATAATTTTAACACCAAAAAAAGGTAAATGTAAGACTATTTAT-GTGTGGGTTCTATAATGTTCAAGTT----
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-------------------------
>chr1B_2196
AATTATATC-----------------------------------------------------------------------
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---AACTAGTCAGCAACCCGTGCATCCGCACGGGCTAGTTTGGTTTTCAATAACATTTTTATTTTAAAGGTTTTATGACT
TTATTGCCAAGTGAGAATATAATTTAGAGTTAGCTTTTCTAAAACATGTAATTGTTTTCTCATTGATATTTGAACAACAA
CAAAAGAAGTAAAATTCATGTGCACGTGTTTTTGCTTTATAGTT--TAAAGAAATGAAAATTGTGACAGTGTATGTACAT
GTGTTCTGCCCGGCTAGCGTTCCCTTGAAGTGATACATTCTGGAGTGAACCATATACAAACCAACTTAACTAATTAACAC
AG-------ATTTGATACCGGCAAGTGTAAGTTCCTTTTTTT-TAACTTAACTTCCTTGTCCAAGTTAATTGAGTTGTGC
AACTATTTTGCCTGGTATAGATGGTA--------TATGAGTTTTTTGCCTGAAATGTTTTCACTGATTTTTATGCTAAGG
ACCAGGTTCGAATTTAA------------------------GCGCACAAAATTTCAAGAACCATTGAACTTTGTAGTATT
TGGTGATA-TGTATAAGACGAAACCCTTGATCACATGAAAAGGATTACATCACGTAGTCTAATCTATGTTATAAGAATTT
AAAGTACAACATATTTCCCAGCTGGATGTACCACTCGACACAGTA----ATAAGAAAATATGATTGG-AATCGACGTGCT
AGCTTCCTGTCCATTGTTTTACATCAGTTAG--TTTTTTATAATAAATATCCATTCAGGCCAGATAAG------------
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-----------------------------------------------------------------------------ACA
AAAGCTGATCACCACGTA----------CATGTAACCTGCTGCAATGGTCGATTTCTTCGGACCAAGTAAATAAATATGT
TGTCAGTTTTGTCCTCAGCAGCAAATTGAGTTTTTCTTTGCAGCAGACAAAGTGATCTACAATCTTAAAAAAGTCGCCAA
GTAAATCTAT--TTGTTACCAGTTTTGCCAT-GGCAGCAAATGGAG-----CTTGCAGCAGACAAAGTCGTTTGAGATCT
GAAAAATTGAACCAATTATCTATTGCTGAATATAACTTTAATTTGGATTGCTAACTGACAAAA-CAATTTGAGAACTGAA
AAACAGAAGGAAGATCACTATTA--
>chr7A_2201
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-----------------------------------------------------------------------------TAA
TTTAACTAGTTAGCAACCCGTGCATCCGCACGGGCTAGTTTGATTTTGAATAACATTTTTATTTTAAAGGTTTTAAGACT
TTATTGCCAAGTGAGACTATAATTTTTAGTTACCTTTTCTAAAACATGTAATTGTTTTCTCATTGATATTCGAACAACAA
CAAAAGAAGTAAAATTCATGTGCACGTGTTTTTGCTTTATAGCT--TAAAGGAATGAAAACAGTGACAGTGTATGCACAC
GTGTTCTGCCCGGCCAGCGTTACCTTGAAGTGATAAATTCTGGAGTGAACCATATACAAACCAACATAACTAATTAACAC
AG-------AATTGATACCGGCAAGTGTAAGTTCC-TTTTTT-TAACTTAACTTCCTTGTCCAAGTTAACT---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------TCTTTGTTATTCATGCAT
TTACCATC------------------------------------------------------------------------
--------------------ACATAAGTTAG--TTTTTTTATAATAATGTCCATTCAGGCCAGATAAGACAAAAGCTGAT
CGAAACCACGGTAGGTGGCACAAGTTGAGACCTTGGCTCTGCTCTCTCCCCCGCTACAGTAGGAGAGGCGATTTTTTCCC
CTTCCCCGTTCGATCTAGTTCGCCGGCGGCGGCTCGCTGGTTTCCCCCCCTCTGCCGGCCGCTTCGGCGGCGGGAGGGTG
GGGAAACCTCGGTGGAGACACTTCGGGAGGCGCTGTCGGGTTGGTGGTTTGTGGCGGCGGTGATCTTCTCCCGTGGCGGG
GTTCTGCGGAATCCGACCACTTCCCCGCCTCCTTCCTGGTGCTCGTAACTCGGCGGAGTTGCCGTGCGCCTTCTTCCCGT
GCCGGAGTCCGTAGGCGGCGGCTCCAGTTGTTGAAAGTTTGGAAGATGCAGGTGATGAGGTCCAGATCGAAGGCGATGGC
GACGATGCAAGGTGGAGGCCCTTTGGGTTCGAGGTCCGTTGACTTCCTGACCGCCATGGGACTCCGTCCGATCCAAGGTT
GTAGAGGAGGAGCGGCGGCGGCGTGCCAGCGGCACGTCTTCATCGACGGCGGCGTCTTCCTTATCCTTAAGGACTTGTTT
GTAATTGTCTTATCTTTTGAGGACTGTTCTGTAAGGGTACTGGATTAATATCACTTGGTCTTTCCCGCAAAAAAAAGACA
AAAGCTGATCACCACGTA----------CATGTAACCTGCTGCAATGGTGGATTTCTTCGGACCAAGTAAATAAATATGT
TGTCAGTTTTGTCCTAAGCAGCAAATTGAGTTTTTCCTTGTAGCAGACAAAGTGATCTACAATCTTAAAAAAGTCGCCAA
GTAAATCTAT--TTGTTACCAGTTTTGCCATCGGCAGCAAATGGAG-----CTTGCAGCAGACAAAGTCGTTTGAGATCT
AAAAAATTGAACCAATTATCTATTGCTCAATATAACTTTAATTTGGATTGCTAACAGACAAAA-CAATTTGAGAACTGAA
AAACAGAAGGAAATTCACTATTA--
>chr4A_2206
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--AAACTAGTCAGCAACACGTGCATCCGCACGGGCTAGTTTGATATTCAATAACATTTTTATTTTAAATGTTTTATGACT
TTATTGCCAAGTGAGAATATAATTTGTAGTTACCTTTTCTAAAAGATGTAATTGTTTTCTCATTGATATTCGAACAACAA
CGAAAGAAGTAAAATTCATGTCCACGTGTTTTTGCTTTATAGCT--TAAAGGAATGAAAATTGTGACAGTATATGCACAT
GTGCTCTGCTCGGCCAGCGTTACCTTGAAGTGTTACATTCTGGAGTGAACCATATACAAACCAACTTAACTAACTAACAT
AA-------ATTTGATACCGGCAAGTGTAAGTTCC-TTTTTT-TAACTTAACTTCCTTGTCCAAGTTGATTGAGTTGGGA
AACTATTTTGCCTGGTATAGATGGTA--------TAGGAGTTTTTTGCCTGATATGTTTTCACTGATTTTTAAGCCAAGG
ACCAGGTTCGAATTTAA------------------------GCGCACAAAATTTCATGAACCATTGAACTTTGTAGTATT
TGGTGACA-TGTATAAGATGAAACCCTTGATCACATGAAAAGGATTACATCACATAGTCTTATCTATGTTATAATAATTT
AAAGTACAACATATTTCCCAACTGGATGTATCATTCGACACAGTA----ATAAGAAAATATGATTGGCAATCGACGTGCT
AGCTTCCTGTCCATTGTTTTATATTAGTTAG---TTTTTTACAATAATATCCATTTAGGCCAGATAAG------------
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-----------------------------------------------------------------------------ACA
AAAGCTGATCACCACGTA----------CATGTAACCTGCTGCAATGATCGATTTCTTCGAACCAAGTAAATAAATATGT
TGTCAGTTT-GTCCTCAGCGGCAAATTGAGTTTTTCTTTGCAGCAGACAAAGTGATCTACAATCTTAAAAAAGCCGCCAA
GTAAATCTAT--TTTTTACCAGTTTTGCCATCGGCAGCAAATGGAG-----CTTGCAGCAGACAAAGTCGTATGAGATCT
GAAAAATAGAACCAATTATCTATTGCTGAATATAACTTTAATTTGGATTGCTTACAGCC-AAA-AAAATTGAGAACTGAA
AAACAGAAGGAAAATCA--------
>chr5A_2206
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--AAACTAGTCAGCAACCCATGCATCCGCACGAGCTAGTTTGATTTTGAATAACATTTTTATTTTAAAGGTTTTATGACT
TTATTGCCAAGTGAGAATATAATTTAGAGTTACCTTTTCTAAAACATGTTAATGTTTTCTGATTGATATTCGAACAACAA
AAAAAGAAGTAAAATTCATGGGACGTGTTGTTTGCTTTATAGCTGATAAAGGAACGAAAATTGTGACAGTGTGTGCACAT
GTGTTCTGCCCATGTAGCGTTACCTTGAAGTGATACATTCTGGAGTGACCCATATACAAACCAACTTAACTAATTAACAT
AG-------ATTTGATACCGGCAAGTGTAAGTTCC-TTTTTTCTAACTTAACTTCCTTGTCCAAGTTAATTGAGTTGTGA
ACCTATTTTGCCTGATATAGATGGTA--------TTGGAGTTTTT-GCCTGATATGTTTTCACTATTTTTTATGCTAAGG
ACCAGGTTCGAATTTAA------------------------GCGCACAAAATTTCAAGAACCATTGAACTTTGTAGTACT
TGGTGACA-TGTATAAGATGAAACCCTTGATCACATGAAAAGGATTACATCACGTAGTCTAATCTATGTTATAAGAATTT
AAAGTACAACATATTTCCCAACATGATGTATCATTCGACGCAGTA----ATAAGAAAATATGATTGGCAATCGACGTGCT
AGCTTCCTATCCATTGTTTTACATCAGTTAGTTTTTTTTTATAATAATATCCATTCTGGCCAGATATG------------
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-----------------------------------------------------------------------------ACA
AAAGATGGTCACCACGTA----------CATGTAACCTGCTGCAATGGTCGATTTCTTCGGACCAAGTAAAT-AATATGT
TGTCAGTTTTGTCCTCAGCAACAAACTGAGTTTTTCCTTGCAGCACACAAAGTGATCTACAATCTTAAAAAAGTCGCCAA
GTAACTCTAT--TTGTTACCAGTTTTGCCATTGGTAGCAAATGGAT-----CTTGCAGCAGAC--AGTCGTTTGAGATCT
GAAAAATTGAT-CAATTATCTGTTGCTGAATATAACTTTAATTTGGATTGCTAACAGACAAAA-CAATTTTGGAACTGAA
ATATAGAAGAAAAATCACTATTA--
>chr7D_2208
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----ACTAGTCATCAACCCGTGTAACTTCACGGGCTAGTTTGATTTTCAATAACATAGTTGTTTTAAAGGTTCTAGAACT
TTATTGTCAACTGAGAATATAATTTCAAGTTACTTTTTCCAAAACATGTAATTATTTCCTCATGGATATTCATACAA---
---AAAAGGTAAAATTCAGGTACATGTGTTTTAGCATTATAGCT--TAAATAAATATATAGTGGGACACTATATGCACAT
TTGTTCTATCCGGGCGACGTTATATTGAA-TGATACAGTTTGGAGTGAACCATATACAAACCAACTTAACGAACTAACAT
CTACATAATATTTGATACCGGAACATGTAAGTTTC-TTGTTTGGAACTTAACTTCGATGTCCAAGTTAATTGAGTAATGT
TGTGAAATTATCTGTTACATATAAACATATATGGTAAGAGTTTTTTTA---ATATGTTTTAATTGATTTTTATGCTAACC
ACCA-GGTTTCCTTATAATTCAACTTCAGAAAACACTATGTGCGTACAAAATTTCGAGAACCCTGGAAGTTAGTAGTATT
TGATGAAACTGTATAACATGATATACTTTATCATATGGAAAGGACTACATCACAGAACTTAATCTATGTTATAAGAACTC
AAAGTAGAACATTTTCGACTTTTTTATAACGAACATCCATCCAGGCCAGATAAGAAAATATGATTGGCAATTGACGTGCT
ATCTTCTCATCAATTGTTTTACATCTGTTCA---TTTTTTATAACAACATCCATCCAAGGCAGATAAG------------
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-----------------------------------------------------------------------------ACT
TAAGCTGATCACCACGTACTTCGTATTGCATGTAAGCTGCTGCAATATTCGATTTGTTCCCACCAAGTAAATGAATCTGT
TGTCAGTTTTGTCCTCAGCGACAAACTTTGTTTTTCCTTGCAGCAGACAAAGTGGTCTACAATCTTAAAAAAGTTGTCAA
GTAAATCAAT--TTGTTACCAGTTTTGTCATCGGCAGCAAATGGAGTTTTCCTTGACGGAGACAAAGTTGTTTGAGATTT
GAAAATTTGAACCAATTATCAATTGCTGAATATAACTTTAATTTGCATTCTGAACAAACTT-AACGATTTGAGATCTAAA
AAACAGAACAAAAATCACTATTA--
>chr5A_2208
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----ACTAGTCAGCAACCCGTGCATCCGCACGGGCTAGTTTGATTTTGAATAACATTTTTATTTTAAAGGTTTTATGACT
TTATTGCCAAGTGAGAATATAATTTAGAGTTACCTTTTCTAAAACATGTTATTGTTTTCTGATTAATATTCGAACAACAA
CAAAAGAAGTAAAATTCGTGGGACGTGTTGTTTGCTTTATAGATTATAAAGGAACAAAAATTGTTACAGTGTGTGCACAT
GTGTTCTGCCCGTGCAGCGTTACCTTGAAGTGATACATTCTGGAGTGAACCATATACAAACCAACTTAACTAATCAACAT
AG-------ATTTGATACCGGCAAGTGTAAGTTCC-TTTTTTCTAACTTAACTTCCTTGTCCAAGTTAATTGAGTTGTGA
ACCTATTTTGCCTGATATAGATGGTA--------TTGGAGTATTT-GCCTGATATGTTTTCACTATTTTTTATGCTAAGG
ACCA-GTTCGAATTTAA------------------------GCGCACAAAATTTCAAGAACCATTGAACTTTGTAGTACT
TGGTGACA-TGTATAAGATGAAACCCTTGATCACATGAAAAGGATTACATCACGTAGTCTAATCTATGTTATAAGAATTT
AGAGTACAACATATTTGCCAACATGATGTATCATTCGACGCAGTA----ATAAGAAAATATGATTGGCAATCGTCGTGCT
AGCTTCATGTCCATTGTTTTACATCAGTTAG--TTTTTTTATAATAATATCCATTCTGGCCAGATATG------------
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-----------------------------------------------------------------------------ACA
AAAGATGGTCACCACGTA----------CATGTAATCTGCTGCAATGGTCGATTTCTTCGGACCAAGTAAATAA-TATCT
TGTTAGTTTTGTCCTCAGCAGCAAATTGAGTTTTTCCTTGCAGCACACAAAGTGATCTACAATCTTAAAAAAGTCGCCAA
GTAACTCTAT--TTGTTACCAGTTTTGCCATCGGTAGCAAATGGAT-----CTTGCAGCAGAC--AGTCGTTTGAGATCT
GAAAAATTGAACCAATTATCTGTTGCTGAATATAACTTTAATTTGGATTGCTAACAGAC-AAAACAATTTGGGAACTGAA
ATATAGAAGAAAAATCACTATTA--
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---------------------------------S-S----
-------------------------------S-------S----------------------------S--S--------
-----------S------S--------S--------------S-------------------S--SSSSSSSS------S
--S---S---S-------------------------------S----S---S--------S-SS-SSSSSSSSSSSSS--
S------------S---S-------------------------S--------------S----S----------------
------------------------------S--S-------------S-S--------------S-S-------S---S-
-------SS------------------------S-SS-SSS-SSSSSSSSSSSSSSS-----------------------
----S--------------------S------S------SS---------------------------------------
-----------------------------------------S---------S----------------------------
----------------SS---S-------------------------------------------S--------------
-----S---------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------SSS--S----S-------S--S---S---S
S----S---------------------------------S----S--------------------SS-----S-------
--------S-S-----S-----------S------SS------SS----S--------------------S---------
------S----------S--S-------------S-----------S---------S-----------------------
-S----S-----------------------------------------------------------------S--S----
---S----------------S----------------------------------S-----S------------------
------S-S-----------------------SS----------------------------------------------
------S--------S-------------------S--S----------S------------------S---------S-
-S-S-----------S---------------------------------------------------S------------
---------S-------S---S--------------S-------------S-----S-------------S-----SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
-----------------------SSS------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------SS-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-----------S------------------------------------------------------S-------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
----------SS--------------------------------------------------------------------
------------------------------S-------------------------------------------------
------------------SS-SSSS
>forward_139
--------------------------------------------------------------------------------
---------------------------------------TCGACAAAAGGAACTCGGCA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_1292
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TGGGAGAGCGAGGATCTTGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_1270
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACTCGACGCGACATCAACTT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_2264
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GGATGCACGGGCTAGTTTGA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_1311
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TGGGAGAGCGAGGATCTTGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_2947
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACAATCGACGTGCT
AGCTTC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
