>input_sequence_55862
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----------------------------------------------------------------AGTTTGCATACCCATT
GTAATCTCAATAAGT----------------------TAATAACCCACTATCACTAGCCATCAAACCGTGTGGGCGCACG
GGGTTTAGTATATACAAGATGTCGTCCCGCTCTACCTCTGCCATTGTCGCCAGGGTGGTGAGCGGGCACCACCTGCTCAA
GATCGACGGGTACTCGCAAACCAAGGTGGTCACCAATGGTAGGCACATCGAGTCTTGCATCTTCCATGTCGGAGGCCACG
CCTGGCGCATCAAGTATTACCCCAACGGCCGAAGCTCAGATAATTCCAATTGCATATC---TGTCTTCATTCAGCTTGCC
AGTGTTAGCATGGACTTGCCCTTCAAGCCTGACA---AGGGCATCTCAGCTCAATGTGTGCTCGGTTTACTGGACCGGGC
TGGGAAGCCTGTGCCATCATATACCTTCACCTTCGACAGAATTTTCACGGCCCCTGAAGGGCAGTGGGGCTTGAACATAT
TCCTCACAAGGTCAGAATTGGAGAACTCAGGTTGCCTCAAGGACGACTGCTTCACTCTCAGGTGCGACATCACTGTCACA
GAGTTGCACGCCGAGGAAACAGAGGATAGTGATTTCACCGATCTCCTGTG---GAAGGAGGGGGCAGATGTGGCCTTCCA
TGTGGGCGGCGAGACAATCGTCGCCCATCAATGGGTGCTGGCTGCCCGGTCTCCAATCTTGAAGGCAGCAGCAGAAGCAG
AGCTCCTTGGCATGTCGGAAAGGGAGAAGAAGAAGACGCCCATGGCCACCATAAGGATCGACGACATGGAGGCAAAAGTG
TTCAAGGCTTTGCTCCACTACATATACACCAATGCATTGCCTGATGAGATGGACAAGGGTGA------------------
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--TGATGCAGCGACAGCAATGGCGCATGGAT-------------------------------------------------
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------------------------------------------------------------------------------TG
CTTGAAGCAGCGGATAGGTACAAGATGGAGAGGCTGAAGATGATCTGCGAAGACATGATGT--------GCAAATATGTC
TCCACGAGCACAGTGATAACCACGCTGGTGTTAGCGGAGCAGCACCACTCCCAGAGGCTCAAGGCGGCATGCATCGACTT
CCTCATCTCCCCGAACAATATGAAAGTCGTCTTGGAAAATGGCGGTTTCAAACATTTACAGAGGAGCTGCCCCTCTGTTC
TCATGGACCTCGTAGAAAGGGCAAAAGCGGCCTGAGACTGGTAGAAGCAAAGGACACGGGGATCATGGTGATTGTGGTAC
CATTCTTCTATTTATCACTGCAGTGTTGGTCAATGTAACAAGTACTACTGGTGACAATCAACTATGGTCCATGCTAATAA
T-------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr4B_1_TraesCS4B01G361600
AAATAGATGACCCGACTTTATACTAAAGTTAGTACAAAGTTGAGTCATCTATTTTGGAGGGAGTATTGGACAATGTATCT
AAAAATAATTCAGAACTTCCCAAAATATCAACACACATGCTTTTCTATTTTATTTCAAAAAACGATTGATGCACAAAATC
CGTTCTCTGTCTAAATGGCCCTACATTGTGAAACAAAGGTAGTAATTGCATTAGTTTGTGCAATGGTATTCTTAGCTTGC
CAATTAAGACTGGAAGCAGCTAGCATCAAAGGTATTCT-------------------TAGCTTGCCAATTAAGATCACTG
GAAGCAGCTAGCATCAAAGGTACAAGCTAAAACCCAGAAACTTAGACATTCTTAGCTTGCCAATTAAGACTGGAAGCAGC
TAGCATCAAAGGAACAAGATAAAGCCCATAAACTTTGATATTGTTCTTTGAT----------------------------
----ATTCTTAGCTTGCCAATTGAACAAGCTAAAGCCAAAAACTATATATGATACTGCCAGCTTGCTAATTAAGGCTGGA
AGCAGCTAGCGTTAGTTTGTGGTATGATATTCTTAACTTGCCAATTATGTCTGG----ATTATGGCCAAAGGCCGCCCTG
CCAATTTTTTCGTGTCGTGAGCAAAACTTGGAT----------------------------------------CCCTGGC
TATTATAGTTTATTTTC----TTGCCAACATTGGCCAAATCATGGACAAGTAAAACCTTGACTGAAGCTCAACAATTTTA
ACTAGCTAATTCTTTAGCAGGACAAACTTGAGCTCTAACCAAACGCACCCTAAAGCCCAAAAAAATTTGGCACAAGCCAC
CCACGACACGTAACCTGGCATCTTCTCTGGGATTAGCAGCCAGCAAGTTTACACCAGATGTGCTTACTC-----GAAGCA
AAGCAAAGGATCCGTCGCAGAAACTTGCAAGTCTTATCAGAACATATTACCTTCCTTCCACCTGCGGATCCATAAAATGT
ACTCATTCATTAACTAACTTTGCTTGTATATATTCCCACCATGGATCATCGCTGCTGCTGCCGCAGTTTGCATACCCATT
GTAATCTCAATAAGT----------------------TAATAACCCACTATCACTAGCCATCAAACCGTGTGGGCGCACG
GGGTTTAGTATATACAAGATGTCGTCCCGCTCTACCTCTGCCATTGTCGCCAGGGTGGTGAGCGGGCACCACCTGCTCAA
GATCGACGGGTACTCGCAAACCAAGGTGGTCACCAATGGTAGGCACATCGAGTCTTGCATCTTCCATGTCGGAGGCCACG
CCTGGCGCATCAAGTATTACCCCAACGGCCGAAGCTCAGATAATTCCAATTGCATATC---TGTCTTCATTCAGCTTGCC
AGTGTTAGCATGGACTTGCCCTTCAAGCCTGACA---AGGGCATCTCAGCTCAATGTGTGCTCGGTTTACTGGACCGGGC
TGGGAAGCCTGTGCCATCATATACCTTCACCTTCGACAGAATTTTCACGGCCCCTGAAGGGCAGTGGGGCTTGAACATAT
TCCTCACAAGGTCAGAATTGGAGAACTCAGGTTGCCTCAAGGACGACTGCTTCACTCTCAGGTGCGACATCACTGTCACA
GAGTTGCACGCCGAGGAAACAGAGGATAGTGATTTCACCGATCTCCTGTG---GAAGGAGGGGGCAGATGTGGCCTTCCA
TGTGGGCGGCGAGACAATCGTCGCCCATCAATGGGTGCTGGCTGCCCGGTCTCCAATCTTGAAGGCAGCAGCAGAAGCAG
AGCTCCTTGGCATGTCGGAAAGGGAGAAGAAGAAGACGCCCATGGCCACCATAAGGATCGACGACATGGAGGCAAAAGTG
TTCAAGGCTTTGCTCCACTACATATACACCAATGCATTGCCTGATGAGATGGACAAGGGTGA------------------
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--TGATGCAGCGACAGCAATGGCGCATGGAT-------------------------------------------------
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------------------------------------------------------------------------------TG
CTTGAAGCAGCGGATAGGTACAAGATGGAGAGGCTGAAGATGATCTGCGAAGACATGATGT--------GCAAATATGTC
TCCACGAGCACAGTGATAACCACGCTGGTGTTAGCGGAGCAGCACCACTCCCAGAGGCTCAAGGCGGCATGCATCGACTT
CCTCATCTCCCCGAACAATATGAAAGTCGTCTTGGAAAATGGCGGTTTCAAACATTTACAGAGGAGCTGCCCCTCTGTTC
TCATGGACCTCGTAGAAAGGGCAAAAGCGGCCTGAGACTGGTAGAAGCAAAGGACACGGGGATCATGGTGATTGTGGTAC
CATTCTTCTATTTATCACTGCAGTGTTGGTCAATGTAACAAGTACTACTGGTGACAATCAACTATGGTCCATGCTAATAA
TACACTAATGTGCATTCGTTTATGTTTGGAGTTG-------------------------ATGCTTATGATTTCTTTTAAT
GTCTATGCCAACACTTAGAAGACTGCCGGGTGGAAAGCCTAGCTAGCTCTAGCCTCCGTGGCGGCACCCTCCAGCGCCGC
CATGGAAGCCCACGGCTCTTCTTCCTCGCCCTCTTCCAGCACCCTCTCCGACAGCACAACACCCACCACCCCCAGACGAC
CTCCTATTCCATGCCAAGCTTTTCATCATCTTCCAGCTTTGCCTAGGCAAGGCGGGGCCTCGATTTCTAAAACTTTGTTC
AGCGCAACCTTCACTTGATGGTCTCCATCCAACCTCATCCCAAACAATCACTGCCATATCTTTATCTTCTTCCACTCAAA
CTCTCTCATCTCGACTACACCTTACTGGCTGCGCTGGTGAAGTTCCGCTTCGGTGGTCATGCTACTAGCTTGAGCTAATG
AATACACCAGCTCAATCATGAAGATGACACCTGATGCTTGTCTTGGATCCTTCAACTCTTTAATTAAGTAAATAGCAGTA
GTAATCCTCCAGATCATGTCATGATAAAATATATTCATACCAGACTCGATGATATCCCACAAAAGCAATAAGTAATTTTC
TAATTTGCGATGAAAATAAAAATAATTAAGCAGTTGAATCCTTCATATTTTACACATTGAATTACAATAATGTAAGAGTA
TAGCTATTGTACTACTAGCTTAAACTCTTCCATGTTGGTTCCACAAACAAGACGAAGAACAACATTTATCAACAGTTATA
GTGGACTTTGCATGTAATCATGTAAATACCCATGTAAATGGTGGGTGATCTGAGTAACCATATGAACAAATAACGTTCAC
CCTCCCGGTCAACTGAGAAACAGGTATACTGGATGAAGAAACACATGGCATCACATAATCGATTGGTTAAATCGGAATTA
TCATAGTGAGGCTTACAGGTGAGGTGGCTTTTTCTTCCAGGAAATGGTCAGACTCACAATATTTGC
>chr4D_63
--------------------------------------------------------------GTATTGGACAATGTATGT
AAAAATAATTCAGAACCTCCCAAAATATCAACACACATGCTTTTCTATTTTATTTCAAAAAA-GATTGATGCACAAAATC
CGTTCTCTGTCTAAATGGCCCTACATTGTGAAATAAAGGTAGTAATTGCATTAGTTTGTGCAATGGTATTCTTAGCTTGC
CAATTAAGACTGGAAGCAGCTAGCATCAAAGGTATTCT-------------------TAGCTTGCCAATTAAGATCACTG
GAAGCAGCTAGCATCAAAGGTACAAGCTAAAACCCAGAAACTTAGACATTCTTAGCTTGCCAATTAAGACTGGAAGCAGC
TAGCAACAAAGGAACAAGATAAAGCCCAAAAACTTTGATATTGTTAGCTTGCCAATTGGACAAGTTAAAGCCAAAAACTT
TGAGATTCTTAGCTTGCCAATTGAACAAGTTAAAGCCAAAAACTTC----GATATTGTTAGCTTGCCAATTAAGACTAGA
AGCGGCTAGCATTAGTTTGTGGTATGATATTCTTAACTTGCCAATTATGTTTGG----ATTATGGCTAAAGGTCGCCCTA
CAATTTTGT---TGTCGTGAGCAAAACTTTA------ATCCTTGTTTGGATGGCTACCAATTTTTATGGCATGCCCTGGC
TATTATAGTTTCTTTTC----TTACCAACATTGGCCAAATCATGGACAAGTAAAACCTTGACTGAAGCTTAACAATTTTA
ACTAGCTAATTCTTTAGCAGGACAAACTTGAGCTCTAACCAAACACACCCTAAAGCCCCAAAAAACTTTGGCACA-----
--ACGGCACGTAACCTGGCATCTTCTCTGGGATTAGCAGCCAGCAAGTTTACACCAGATGTGCTTAATC-----GAAGCA
AAGCAAAGGATCCGTCACAGAAACTTGCAAGTCTTATCAGAACATATTACCTTCCTTCCACCTGCGGATCCATAAAATAT
----ATTCATTAACTAACTTTGCTTGTATATATTCCCACCATGGATCATCGCTGCCGTTGCTGCAGTTTGCATACCCATC
GTAT--TCAATAAGT----------------------TAATAACCCACTGTCACTACCCATCAAACCGTGTGGACGCACG
GGGTTTAGTATACACAAGATGTCGTCACGCTCTACCTCCGCCATCATCGCCAGAGCGGTGAGCGGGCACCACTTGCTCAA
GATCGACGGCTACTCGCAAACCAAGGTGGTCACCGTTGCTAGCTACATCCAATCCTGCACTTTTGATGTCGGAGGCCACA
GCTGGCGTATCAACTATTACCCCAACGGCTTCCGCTCAGATAGTACCGATTACATATC---TGTCTTCATTCAGCTTGTC
AGTGTTAGCAGGGACTTGCCGGTCGTGCCAATCTTGCAGGGCATCTCAGCACAAGGCTCGCTCAGTTTACTGGACCGGGA
TGGGAAACCAGTGCCATCATATACCCACACCTTCAATAGAAGTTTCAAGACCTCTGAAGGAAGCTGGGGCTGGTACAGTT
ACATCACAAGGTCGGCGCTGGAGAACTCAGGTTACCTCAAGGACGATAACTTCACTCTCAGGTGCGACATCACCGTCACG
GAGCTGCGCGTAGAGGAAACAGAGGATTGCGATTTCGCCGATCTCCTGTGGAAGAAGGAGGGGGCAGATGTGGCCTTCGA
GGTTGATGGTGAGACACTCACCGCCCATCGATGGGTGCTGGCTGCCCGGTCACCGATCTTGAAGGCAGCAGTGAGAGCAG
AACTCCTTGGCGAGCTGGAAAGGGAGAGGAAC---ACGCCCATAGCCACCGTGAGGATCGACAACATGGAGGCAAAAGTG
TTCAAGGCTTTGCTCCACTACATATACACCGACACATTGCCTGATGAGATGGACAAGGGAGA------------------
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--TGAGGCTGCGACAGCAATGGCGCACGGAT-------------------------------------------------
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------------------------------------------------------------------------------TG
CTTGAAGCGGCGGATAGGTACAAGGTGGAGAGGCTGAAGCTGATCTGCGAGGACATGCTGT--------GCAAACGTGTC
TCCACAGGCACGGCGATAACCACGCTGGTGTTAGCGGAGCAGCACCACTGCCAGAGACTCAAGATAACGTGCATCGACTT
CCTCGTGTCTCCCAAGAATATGGAAGTCGTCTTGGAAAATGGTGGTTTCAAGCATTTACAGAGGAGCTGCCCCTCTGTTC
TCATGGACCTCATAGAAAGGGCGAAAGTGGCCTGAGGGAAGC--AAGGAAAGGATACAGTC-TAAGGGTGATCGTGCCAC
GGCTCTTCTATTGTAAA-TGCAGTATTGGCCGATGTA-------------------------------------------
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------------------------------------------------------------------
>chr5A_152
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CACAAAAGT
TGTTCTCCGTCTAAATGACCCTATATTGCGATGTAGAATTAGTAACTACATTAGTTTGTGCAATGATTTTCTTAGCTTGC
CAATTAAGACTGGAAGCAGCTAGCATCGAAGGAATAAGCCAAAAACTTAGATATCGATAGCTTGCCAATTAAGG---CTA
GAAGCAGCTAGCATCAAAGGTACAAGTTAAAGCCAA-AAACTCTGATGTTGTTAACTTGACAATTAGGACTGGAAGCGAT
TAGCACCAAAGGAAGAAGCTAAAGCCCAAAAGCTTTGATATTCTTAGAC-------------------------------
---------------------------------------------------------------TGTCAATTAAGACTGGA
AGCAGCTAGCATTAGTTTGCGCAATGATATTCTTAGCTTGCCAATTATGCTTGTACTAATTATGGCCAAAGGGTACCCTA
CAACTTTCT---TTTGTCATGATGATCAGAAACTTAGATTCTTGTCTTGATGGTTGCCAATTCTTTTGGCATGCACATGC
TCCTTTGGCTATTCATTCTTATTGCCAACATTGGCCAAATAATGGGCAAGTGAAACCTTGACAGAAATTTTAGCTAGACA
CTTTTCTGCTACAGT--------AAACTTGAGCTCAAACCGAACGAAAGACATCCTAA--------------------AC
CCACGGCACGCAACTCGGTATCAGCTCTGGGATTAGCAGCCAGCAAGTTATACCAGGATGTGCTTAATTGAAGTGAAGCA
AAGCAAAGGATCTGTCATGGAAACTTGCAAGTCTTGTCCAAACATATTGCCCTCCTTCCACCGCAAGATCCATACCCATT
GACTAA------------TTTGATTGTATATA----------------------CCGCTGCCGCAGTTTCCATACACATT
GTAT--TCTCATAGGCTCCCCTTCTCTGAGCTAGCCGTAATAACCTACTATCACTAGCCATCAAACCGTGCAGACGCATA
GG--TTAGTATATCTAAGATGTCGTCACGCTCTACCTCCGTCATCGTCGCCAGAGCAGTGAGCGGGCACCATTTGCTCAA
GATCGATGGGTACTCGCAAACCAAGGTGGTCACCCATGGTAGAGGCATCAAATCCTACACTTTTAAGGTCGGAGGCCACA
GTTGGCTTCTCCAGTATTACCCCAATGGCGAGCCCTCGGGTCCTGACACTTACATAGATGATGTCTTCATTCAGCTTGTC
AGTGTAAGCAGGGACATGCCGGTCAAGCCTGACA---AGGGCATCTCAGCTCAAGGCTCGCTCAGTTTACTGGACAGGGC
TGGGAAGCCAGTGCCATCATATACCAGCACCTTCAATAGAAGTTTCACAACCACT---GGGATCTTGGTCTGGTACACCT
------CAAGGACGACCCTAGAGAACTCAGGTTATCTCAAGGACGATTGCTTCACTCTCAGGTGCGACATCACCGTCACG
GAGCTGCGTGCCGAGAAAACAGAGGATTGCGATTTCGCCTATCTCCTGTGGAAG---GAGGGGGCAGATGTGGCCTTCCA
TGTGGGAGGTGAGACAACCGCCGCCCATCAATGGGTGCTGGCTGCCCGGTCTCCGATCTTGAAGGCAGCAGCCGAAGCAG
AGCTCCTTGGCGTGCCAGAAAGGGAGAAGAA--AGACGCCCACGGCCACCGTAAGGATTGACGACATGGAGGCAAAAGTG
TTCAAGGCTTTGATCCACTACATATATATTGATGCATTGCCTGATGAGATAGACAAGGGCTGAGACTGGGAGAAGCAAGG
ATACCATGATCACGGTCATGGTGGCCATTTCTATTTGTCAATGCTGTGTTGGTCAATGTAAGAAGTACTACTGGTGACAA
TCAACTATGCTCCATACTAATAATATGCTGATGTACATTCGTTTATGTTTGGGGATTGTAGTTGTATTTGCTATACAATT
ATAATGCTTATGATTTCTTTTAATGTGTTATATCAACACTTAGAAGACTGCCAGATGAAAAGCCTAGCTCTAGCCTCCAT
GGTGGCGCCCTCCAGCGCCTCTAGCTCTGGAGTGATGATTGTGTAGTGATTGTTTGCAATGTTTGTGCTTCTCTATGAAC
CCTACTGATCAGTGTGTGTTGCATGCTTGTGTGTTCCTACCTCTGAATGTGTTCCTCATTCTGTCATGGACTATGATATG
CATGTATCGTGTTTCATGCTCACAATGTATACCTATAAAAGAAATTGACAAAATTTTCCAAACCAGGTTTACGTCTGCCA
CGAAAAAGGGGCTGCCGATGGCGGTAGGCCCACCAGCACCCCTGCCCGTTCCGTTGCACTGACGCAAACGTGTTATCGTC
AAGCTGCTACCGTGCGCTGTGGCGGCAGGCTCTGCCGCCGCCGGCTGTGGCAGCAGGTGCCACGTGTCGGCTGCCCGACC
TACCGCCATGGTAGCTCTGTCAATACGGTGCGGACGTGGTCCTTTTTGTCAATACGAAAGCATAGCTGGTCTTTTCAGAC
AAAAAATTGAAATATGAACCTATAAATTTTGGTCAAAAAATATGTCCATTTTGAGGGTTGTGCACAGTTATGGGCTCTAG
TTTAGACCGTCCTCTCCCATGTTTCTTTTTCTTTTCTGTATAACCCACAAAAGGACATATTTATGGGCCAGAAGTTGAAG
TCTTGAAGATTCACACTATCGGACAATGTACATGTAAAACAATTCAAAATATCAACGTGCATGCTTTTCTATTTCTTTTT
AAAAAAGGGCACAAAATCCGTTCTCTGTCTAAATGACCCTATATTCCAAAATAGAGCTAGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTAGTGATTGAATTAGTTTGTGTGATGATATTGATAGCATTGATGCTGGAAGCAACTACCATCAAGGGAAA
GCCCCAAAAACTTTGATATTCTTAGCTTGCTAATTAAGTCTGGAAGCAGCTACCATCAAGGGAACAAGCTAAAGGCCAAA
AACTTTCATATTGGTAGCTTGCCAATTAAAACTGGAAGCAGGTACCATCGAAGGAACAAGCTAAAGCCCGAAAACTTTGA
TATTGGTAGCTTGCCAATTAAGACCCGAAGCAACTAGCATTAGTTTGCGCAGTTCTATTCTTAGCTTGCCAATTGTGTTT
GGATTAATTATGGCTAAAGATTATCTTACCAATTTTTGGTCATGACCAAAAAAATTATCCTTGTTTGGATGGTTGCCAAA
AAAATTGGCATGCCCATGCCCCCTTTTGGCCATCTAGCTCATTTTTCTTGTCATTGGCCAAATCATGAGCAAGTAAAACC
TTCAATAAAAGCTAGCCAATTTTTTAGTGCGGTGAACTTCAGTTCAAACAAAGCACACCCTAAACCCGCAAAAACTTCAG
CACAGGCCACCCACGCACTACGGCACGCAACCTCATATCAGTTATGGGACTGGATGTGCTTAATCAAAGCAAAGCGAAGG
ATCTGTCATAAAAATTTGCAAGTCTGGGTCTACCCTCCTTTTCAGAAAGAAAAAGAAGAAATTTGCAAGTCTTATCCAAA
CATATTACGTGCTTAATCAAAGCAAAGCAAAGGATCCATCATAGAAGCTTGCAAGTCTTATCAGAACATATTACCTTCCT
TCAACTGGAGGATCCATAAAATATATTCATTCATTACCTAATTTTGCTTGTATATATATATATTCGCACCATGGATTGTC
ATTGCTGCAGCCACAGCTGCAATTTCCATCCCATTGTTATTCCCATATGCTCCCCCTCTCTGAGCTAGCCATAATAATCT
ACTATTACTAGCCGTCAAACCGTCGGCAACCGTGCAGACTTAGTGCATCTAAGATGTCGTCACGCTCTACCTCCGCCATC
ATCGCCAGGGCGGTGAGCGGGCACCACTTGCTCAAGATCGACGGGCACTCGCAAACCAATAGTAGCGACATCAAATCCTG
CACTTTCCATGTTGGAGGCCACGCCTGGCGCATCAAGTACTACCCCAACGGCCAAGGTTCAGATAATGCCAATTGCATAT
CTGTCTTCATTCAGCTTGCCAGTGTTAGCATGGACTTGCCGTTCAAGCCTGACAAGGGCATCTCAGCTCAATGTGTGCTC
GGTTTACTGTGCCATCATATACCTTCACCTTCGATAGAAGTTTCACAACCCCTCAAGGAGAGTGGGGCTGGTACAAATTC
ATCACAAGGTCGGAATTAGAGAACTCAGGTTGCCTCAAGGACGACTGCTTCACTCTCAGGTGCGACATCACTGTCACAGA
GCTGCGCGCCAGGGAAACAGAGGATCGTGATTTCACCGATCTCCTGTGGAAGGAGGGGGCAGATGTGGCCTTCCATGTGG
GCGGCGAGACAATCGTCGCCCATCGATGGGTGCTGGCTGCCCGGTCTCCAATCTTGAAGGCAGCAGCAGAAGCAGAGCTC
CTTGGCATGTCGGAAAGGGAGAAGAAGAAGAAGACGCCCATGGCCACCATAAGGATCGACGACATGGAGGCAAAAGTGTT
TCCACAAGCACAGCGATAACCACGCTGGTGTTAGCGGAGCAGCACCACTCCCAGCGGCTCAAGGCGGCATGCATCGACTT
CCTCATCTCTCCGAACAATATGAAAGTCGTCTTGGAAAATGGCGGTTTCAAACATTTACAGAGGAGCTGCCCCTCTGTTC
TCATGGACCTTGTAGAAAGGACAAAAGCGGCCTGAGACTGGTAGAAGCAAAGGACACGGGGATCATGGTGATTGTGGTAC
CATTCTTCTATTTATCACTGCAGTGTTGGTCAATGTAACAAGTACTACTGGTGACAATCAAGTATGGCTCATGCTAATAA
TACACTAATGTGCATTCGTTTATGTTTGGAGTTGTAGCTGTATTTGCTATACAAGTATAATACTTATGATTTCTTTTAAT
GTCTATGCCAACACTTAGAAGACTGCCGGGTGGAAAGCCTAGC----TCTAGCCTCCGTGGTGGCACCCTCCAGCGCCGC
CATGGAAGCCCATGGCTCTTCTTCCTCGCCCTCTTCCGGCACCATCTCCGACAGCACAACACCCACCACCCCCAGAC---
CTCCTATTCCATGCCAAGCTTTTCATCATCTTCCAGCTTTGCCTAGGCAAGGCGGGGCTT-GATTTCTAAAATTTTGTCC
AGCGCAACCTTCACTTGATGGTCTCCATCCAATCTCATCCCAAACAATCACTGCCATATCTTCATCTTCTTCCACTCAAA
CTCTCTCATCTCGACTACACCTTAGTGGCTGCGCTGGTGAAGCTTCGCTTCGGTGGTCATGCTACTAGCTTGAGCTAATG
AATACACCAGCTCAATCATGAAGCTGACACCTGATGCTTGTCTTAGATCCTTCAGCTCTTTAATTAAGTAAATAGCAGTA
GTAATCCTCCAGATCACGTCATGATAAAATATATTCATACCGGACTCGATGATATCCCACAAAAGCAATAAGTAATTTTC
CGATTTGCGATGAAAATGAAAATAATTAAGCAGTTGACACCTTCATATTTTACAAATTGAATTACAATAATGTAAGAGTA
TAGCTATTGTACTACTAGCTTAAACTCTTCCATGTTGGTTCCACAAACAAGACGAAGAACAACATTTATCAACAGTTAAA
GTGAACTTTGCATGTAATCATGTAAATACCCATGTAAATGGTGGGTGATCTGAGTAACCATATGAACAAATAACGTTCAC
CCTCCCGATGAACTGAGAAACTGGTATACTGGATGAAGAAACACATGGCATCGCATAATTGATTGGTTAAATCGGAATTA
TCATAGTGAGGCTTACAGGTGAGGTGGCTTTTTCTTCCAGGAAATGGTCC--CTCACAATATTTGC
>chr4D_1289
TATG----------------------------------------------------------------------------
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-------------------------------------------------------------TGTCTTCATTCAGCTTGTC
AGTGTAAGCAGGGACTTGCCAGTGGTGCCTGACA---AGGGCATCTCAGCTCAAGGTTCGCTCGGTTTACTGAACCGGAC
TGGGAAACCAGTGCCGTTAGATACCTACACCTTCAGCAGGCGTTTCACGACCAACGAAGA------GGGCTGGTACAAAT
TCTTCACAAGATCGACGCTAGAGAGC------TACCTCAAGGATGACTGCTTCACTCTCAGTTGCGACATTACTGTTACA
AAGCTGCGAGCCGAGGAAACGGAAGATTGTGATTTTGTCGATCTCCTGTGGA---AGGAGGGGGCAGATGTGACCTTCAA
AGTGGGTGGTGAGACAATTGCCGCCCATCGATGGGTGCTGGCTGCCAGATCTCTGATCTTGAAGGCAGCAGCAGAAGCAG
AGCTCCTTGGCGTGCCAGAAAGGGAGAAAAAGACGACGCCCATGGCCACCGTAAGGATCGACGACATGGAGGCAAAAGTG
TTCAAGGCTTTGCTCCACTACATATACACCGACACATTGCCTGATGAAATGGACAAGGGAGA------------------
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--TGAGGCGGTGACAGCAATGGCGCACCGAT-------------------------------------------------
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------------------------------------------------------------------------------TG
CTTGGAGCGGCTGATAGGTACAAGGTGGAGAGACTGAAGCTGATCTGCGAGGATATGTTGT--------GCAAACGTGTC
TCCACAAGCACGGTCATAACCACGTTGGTGTTAGCGGAGCAGCACCACTCCCAGAGGCTCAAGGCGGCATGCATCGACTT
CCTCATCTCCCCAAACAATATGAAAGTCGTCTTGGAAAATGGCGGTTTCAAACATTTACAGAGCAGCTGCCCCTCTGTTC
TCATGGACCTCATAGAAAGGGCAAAAGTGGCCTGAGACTGGTAGAAGCAAAGGACACGGTGATCATGGTGATTTTGGTAC
CATTCTTCTATTTATCACTGCAGTGTTGGTCAATGTAAGAAGTACTACTGGTGACAATCAACTATGGTCCATGCTAATAA
TACACTAATGTGCATTCGTTTATGTTTGGAGTTGTAGTTGTATTTGCTATACAAGTATAATGCTTATGATTTCTTTTAAT
GTGTATGCCAACACTTAGAAGACTGTCGGGTGGAAAGCCTAGC----TCTAGCCTCCGTGGTGGCACCCTCGAGCGCCGC
CATGGAAGCCCACGGCTCTTCTTCCTCGCCCTCTTCCAGCACCCTCTCCGACAGCACAACACCCACCACCCCCAGACGGC
CTCCTATTCCATGCCAAGCTTTTCATCATCTTCCAGCTTTGCCTAGG-----CGGGGCCTCGATTTCTAAAACCTTGTCC
AGCGCAACCTTCACCTGATGGTCTCCATCCAATCTCATCCCAAACAATCACTGCCATATCTTTATCTTCTTCCACTCAAA
CTCTCTCATCTCGACTACACCTTACTGGCTGCACTGGTGAAGTTTCGCTTCGGTGGTCATGCTACTAGCTTGAGCTAATG
AATACGCCAGCTCAATCGTGAAGCTGACACCTGATGCTTGTCTTGGATCCTTTAGTTCTTTAATTAAGTAAATAACAGTA
GTAATCCTCCAGATCATGTCATGATAAAATATATTCATACCGGACTCGA-GATATCCCACAAAAGCAATAAGTAATTTTC
CGATTTGCGATGAAAATAAAAATAATTAAGCAGTTGACCCCTTCATATTTTACAAATTGAATTACAATAATGTAAGAGTA
TAGCTATTGTACTACTAGCTTAAACTCTTCCATGTTGGTTCCACAAACAAGACGAAGAACAACATTTATCAACAGTTAAA
GTGGACTTTGCATGTAATCATGTAAATACCCATGTAAATGGTGGGTGATCTGAGTAACCATATGAACAAATAACGTTCAC
CCTCCCGGTCAACTGAGAAACAGGTATACTGGATGAAGAAACACATGGCATCACATAATCAATTGGTTAAATCGGAATTA
TCATAGTGAGGCTTACAGGTGAGGTGGCTTTTTCTTCCAGGAAATGGTCAGACTCGCAATATTTGC
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S-
----------------S---------------------------------------------S-----------------
---------------------------------S----------------------------------------------
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-----S----------------------S----------------SSS-SSS----------------------------
-----------------------------S--------------SSSSSS----S--SS-------S-------S-----
----------S---------------------------------------S---------------------S------S
-S-S---S-SSS-----------------SS-S-----------------------------------------------
-----------S---------------------------------------------------------S----------
----------------------------------------------------------S------S--S-SSSS-SSS--
-----S------------------------------------------------------------S-------------
----------------S-------------------------------------------------------------S-
SSSS---------------------------------------------------S------------------------
---SSS-------------------------------------------------------------------S------
--------------------------S-----------S-----S--------S-S----------------S-------
----------------------------------S-------SS-----S-S--S----SS--SS--------------S
S------S---------------------SSSS---------S-S------S--------------------------S-
----------S---------SS--------------------------------S--SS---------------------
---------S----------------S-------S------S-------S--S--------SSS-------S-S---S--
--S----------S-SSS---------------S----------------------------------------------
---S---S-------------------S--------S-------------------------------------------
------S--S----------S---------------------------------S-------------------------
-----------S--S-----------------------------------S-----------------------------
------------------------------S----------------------------S--------------------
--------------------------------------------------------------------------------
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--------------------------S-----------------------------------------------------
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--------S------------------------------------------------S----------------SS----
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------SSSS--------------S------------------
------------------------------------------------------------------------------S-
------------------------------------------------------------------------------S-
--------------------------------S-----------------------------------------------
--------------------------------------------S-----------------------------------
-----------------------S------------------------------S-------------------------
-----------------------------------------S--------------------------------------
SS-----------------------------------SS---------------S-------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_977
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GCA
AAGCAAAGGATCCGTCG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_5196
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------ATGTC
TCCACGAGCACAGTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_1391
--------------------------------------------------------------------------------
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-----------AAGTATTACCCCAACGGCCG-------------------------------------------------
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>reverse_5839
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------------------------------------------------------------------------------TC
AGCGCAACCTTCACTTGA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
