>input_sequence_55795
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------ATAGG-----ATAACACGGATCCTCTGGGCATCAACGTGTCCTGCTACTCCACCTCTACCAC
ACCGCCGCTCACCTTGCGGCCTGCGCCGATCGAATCTTAGCTTGGCTGGCGCTGGACAATGGATTCCGGGAGCACGGAGA
TCCTCGTTGAAAACGGCTGCTTCCGACTATACAAGGACGGCCACATCGACCGTCTCGGAGGCACGGACCACGTGCCCGCC
GGCTTCGACGCCGACACCGGCGTCACCTCCAAAGACGTCGTAATCGACGCCGTCACCGGCGTCGCCGTTCGCCTCTACCT
GCCAGACGTCCATGCCGCTGAATCCGACGGCCCCGACATCAGTACAGCCGCAGTCACGAAGCTCCCGGTCGTCGTCTTCT
TCCACGGCGGTTACTTCATCGTCGGATCAGCCGGCTGCCCTAAGCACCACCGCTACGTGAACTCGCTGGCCGCCGACGCC
CGCGCCATCGTCGTCTCCGTCGACTACCGCCTCGCGCCCGAGCACCTGCTCCCGGCGGCCTACGACGACTCCTGGGCCGC
GCTCAACTGGGCGGTGTCCGGCGCC------GACCCGTGGCTGTCCGAGCACGGCGAACTCGGCCGCGTCTTCCTGGCCG
GCGCCAGCGCCGGCGGGAACATAGCCCACAACATGGCCATCGCGGCCGGCGCGAGTGGCCTCTTCGCCGCGGCGACACGC
CTAGAGGGCGCGGTCTTGCTCCACCCGTCGTTCAGCGGCGAGCAGAGGATCGAGACGGAGTCAGAGGAGTACAGGGCGAG
CGTCAAGATGAGGTGCTCCGTGATCTTCCCCGGCGCGAGAGGCGGGCTGGACGACCCGAGGATGAACCCGACGGCCGACG
GCGCGCCGAGCCTGCGGACGCTCCCGTGCGAGAGGATGCTGGTGTGCGCGGCGTCGGAGGACGCGAGGCTGCCGAGGGTG
CGGGCGTACTACGACGCCGTGAAGTCCAGCAGGTGGTCTGGGCAAGTGGAGTGGTTCGAGTCGGAAGGCAAGGGGCACGC
CTTCTTCGTCGACGAGCATGGCTGCCGCGAGGCGGTTGCGCTCATGGAACGAGTGGCTGGTTTCATCGCCGGCCATTGAT
AACTGGGCTCTCAAATGTGAAGTGATGTTTGGCTACCGTCATTCGTTGCTTGAAGAACTGTGCTATCTTATAATTCAGTC
ATAGGAAATGGAAACTGAATGGTGGCAAGTTTTCAATCAGAGCCTTGTATTTTTCAACCGGGACAGTGACAGTGGTGCAC
TATAAAAGCTTGTGGAAAATAAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr5B_1_TraesCS5B01G235400
GTTTTCATAACTTCAATGAGACTTCGCCAAAAACATCCATCTCTTCCTCAGGAGCCATTGTTTTCATAGCTTCGATCGCA
ATTCCCCGAAAACATCCATCTCATCCACATGCCCATCAGTTTCGGACCCAGAGTCTTTAATACTTTTAAGATATGGGAGC
AATAGATTTTTTGAACTCACATAAGAGTAGCATAGACGAGAGT-------------------------------------
-----TGATTATCAATCTTGCCAGAAAACCCCGCCTTAGGATAATCAGCTGACGTCTGGACAATATCAACAAAGTTGATA
ATTGTGCTGTCAAGAAATGAAGTCATAATATCAATAGAAGGATCAGCAGGTTGAGAGGTGCATACCTATCTGAATTTCAG
CAGGACGAAAATCAACAACTCAAGTCTCCACCATACCAAGTTGTTTTCCAATATGAGAACTACTGGATTCCTTCCTGTTA
GCGGTATCTAACAGGAAGCTACCGCTAACAGGAAGCTCCAATAAACGTTTAGCTCCAATGTT-GACCAATATTGCCCACC
CTTTCATGAACGGAAAAA---AAAACAATCATAATCAGCGAACCTTCGCTGGGAGGGATTACGATTGTGAAAATTTGATG
GCAACTATAGTTGCCGTGAGAATGCAAAGATAATAAATTTAGTTTGCAAGCACGGCAATTTTCTGGCGAAAAACAGAACT
GCAGCGGAGTTGCCATGCTGCCTAACTAATTTTGCCATGCTCAGCCAACACAAATTGCCATGAAAATCGTTCGCAAATGT
CATCCCTCTTAGC--ACGTTCGCTGGCTATTGGGTCCAAAAGAAAAGAAAATATAATTTTCAATCGCATTTGCTGTCTGG
ATAGTTGGGGGGAGGGGGAGGGCGGTTGTACATACGAGCGTGACGTGACCAGAGTGCTTGCGTGTAACAAAAAACGAGCA
CGGGAGCTAACTGACAATGAACTGATCGATGCATTTGAGCTGTA----------CTCAAGGCGTCACCACAAATACAAGG
GCACACATACACATAAGCATAGG-----ATAACACGGATCCTCTGGGCATCAACGTGTCCTGCTACTCCACCTCTACCAC
ACCGCCGCTCACCTTGCGGCCTGCGCCGATCGAATCTTAGCTTGGCTGGCGCTGGACAATGGATTCCGGGAGCACGGAGA
TCCTCGTTGAAAACGGCTGCTTCCGACTATACAAGGACGGCCACATCGACCGTCTCGGAGGCACGGACCACGTGCCCGCC
GGCTTCGACGCCGACACCGGCGTCACCTCCAAAGACGTCGTAATCGACGCCGTCACCGGCGTCGCCGTTCGCCTCTACCT
GCCAGACGTCCATGCCGCTGAATCCGACGGCCCCGACATCAGTACAGCCGCAGTCACGAAGCTCCCGGTCGTCGTCTTCT
TCCACGGCGGTTACTTCATCGTCGGATCAGCCGGCTGCCCTAAGCACCACCGCTACGTGAACTCGCTGGCCGCCGACGCC
CGCGCCATCGTCGTCTCCGTCGACTACCGCCTCGCGCCCGAGCACCTGCTCCCGGCGGCCTACGACGACTCCTGGGCCGC
GCTCAACTGGGCGGTGTCCGGCGCC------GACCCGTGGCTGTCCGAGCACGGCGAACTCGGCCGCGTCTTCCTGGCCG
GCGCCAGCGCCGGCGGGAACATAGCCCACAACATGGCCATCGCGGCCGGCGCGAGTGGCCTCTTCGCCGCGGCGACACGC
CTAGAGGGCGCGGTCTTGCTCCACCCGTCGTTCAGCGGCGAGCAGAGGATCGAGACGGAGTCAGAGGAGTACAGGGCGAG
CGTCAAGATGAGGTGCTCCGTGATCTTCCCCGGCGCGAGAGGCGGGCTGGACGACCCGAGGATGAACCCGACGGCCGACG
GCGCGCCGAGCCTGCGGACGCTCCCGTGCGAGAGGATGCTGGTGTGCGCGGCGTCGGAGGACGCGAGGCTGCCGAGGGTG
CGGGCGTACTACGACGCCGTGAAGTCCAGCAGGTGGTCTGGGCAAGTGGAGTGGTTCGAGTCGGAAGGCAAGGGGCACGC
CTTCTTCGTCGACGAGCATGGCTGCCGCGAGGCGGTTGCGCTCATGGAACGAGTGGCTGGTTTCATCGCCGGCCATTGAT
AACTGGGCTCTCAAATGTGAAGTGATGTTTGGCTACCGTCATTCGTTGCTTGAAGAACTGTGCTATCTTATAATTCAGTC
ATAGGAAATGGAAACTGAATGGTGGCAAGTTTTCAATCAGAGCCTTGTATTTTTCAACCGGGACAGTGACAGTGGTGCAC
TATAAAAGCTTGTGGAAAATAAAAGGGCCCCTGAAATTCAAGATTTTCCTCTGGTTGTTGCT---------------GAC
AAAAGAGAACTTGACTAGAAAAGGATGAACAGGAAATGAGCAATGTCAATCTTGCTTTGAGAACGAAACCGCGTAGATCA
TCTTTTGTTTGGGTGCTGGTAAGCTAAATTTATCAGGCAGTTAGTATTGTGTACTTTGTACCTCCGAAGAACTTCTACTG
CTTTTTAATCGCACACGAACACATCACCGTGTACCCTCGACGCCCAGCCGGGAAGCGCGGA---ATGCAAGCGATCCGGC
GGGCGTTTTTGTGGAGCCGAGACACCACATGCCCGAGACGGCCCCCATCAAGGCGCGCGGCGGCTATGGACTGCCCTAGG
TCGACCTGATCGCCCCTAGTGCCTCAAGGTTCGCC---------TGCAAAGAACAAACAAAGAACAAGAAGAAGAACA-A
AGGGAGAAGG--TCAAGGTAAAAAATGATA----------GATTTGTCGATCGTGTGTTGTTCAATCAGCCGTCACATCT
TATCTATTTATGAGATGGTTGGACTACCCGTACAAGAAAAAGACTAAAAATTCCGTCC-AAAACATCAA-AAACCCTAAC
CTAACTCGGACATGAATCTTTGGCAAATTTTCGGATCAACTCAGAGCCACCGAGTGGTTTCCTTCGGTCCCT--------
-------CAACCTTCTGTAATCTTCTGTATCTCACTCGAAATTTCCGAGTGGTTTCACTCAGAATTACCG--AGTCAACT
CGGTCTCACCGAGTCAAATCAACTCGGTCGGTCTGAAATGACTCGGCAACTTCTGTTTCTGACCTTGTTTTGGCTCCACG
GGTTGCATACGGTCTCGGATTGAGACGATTCTCATATCAAAATCAACGGTTTCGACGAGGCACACAACTTTCATCTTGAA
ACATTTTC--CATCCGATGCCATCTTAATTGAGTTTCAT---GCCATTCATTAATCTGATGTCAACATGAGCATCTCTGA
ACTTGTCATAACTTTTGCATCCGAACTCCGTTTTAGACCATCTTTGT
>chr5D_174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AACTCACATAAGAGTAGCATAGACGAGAGTAAGAGCAACCCCTCCAAGATAGGACTATGCATATGAA
CATGTTGATTATCAATCTTGCCAAAAAAACCA-CCTTAGGATAATCAGCTAACATCTGGACAATATCAACAAAGTTGATA
ATTGTGTTGTCAATAAATGAAGTCATAACATCAATAGAAGGATCAGCAGGTTGAGAGGTGCATACCTATCTGAATTT-AG
CAGGACGAAAATCAACAACTGGAGTCTCCACCATACCAAGTTGTTTTCCAATCTGAGAACTAC-GGATTCCTTCCTGTTA
GCGGTATCTAACAGA-----------------AAGCTCCAATAAACGTTTAGCTCCAATGTTTGACCAATATTGCCCACC
CTTTCACGAATGGAAAAAGAAAAAACAACCATAATAGGCGAACGTTTGGTGGGAAGGATTACAATTGTGAAAATTTGATG
GCAACTTTAGTTGCCGTGAGGATGCAAAGATAATAAATTTAGTTTGCAAGCACGGCAATTTTCTGACAAAAAACAGAACT
GCAGCGGAGTTGCCATGCTGGCTAACTATTTTTGCCATGCTCAGCCAACACAAATTGCCGTGAAAATCGTTCGCAAATGT
CATCCATCTGAGGGAACGTTCGCTGGCTATTGGGTCCAAAAGAAAAGGAAATATAATTTTCAATCACATTTGCTGGCTGA
ATAGTTAG-----GGGGGAGGGCGGTTGTACGTACGAGCGTGACGTGACCAGAGTGCTTGCGTCTAACAAAAAACGAGCA
CAGTAGCTAAGTGACAGTGAACTGATCGATGCATTTGAGCTGTAGTACTTTGTCCTCAAGGCGTCACCACAAATACAAGG
GCACACATACACATAAGCATAGGATAACATAACACGGATCCTCTGGGCATCAACGTGTCCTGCTACTCCACCTCTACCAC
ACCGCCGCTCCCCTTGCGGCCTGCGCCCATCGAATCTTAGCTTGGCTGGCGCTGGACAATGGATTCCGGGAGCACGGAGA
TCCTCGTTGAAAACGGCTGCTTCCGACTATACAAGGACGGCCACATCGACCGTGTCGGAGGCACGGACAACGTGTCCGCC
GGCTTCGACGCCGACACCGGCGTCACCTCCAGAGACGTCGTGATCGACGCCGTCACCGGCGTCGCCGTTCGCCTCTACCT
GCCAGACATCCATGCCGCTGAATCCGACGGCACCGACATCTGCACCGCCGCGGTCACGAAGCTCCCGATCGTCGTCTTCT
TCCACGGCGGTTACTTCATCGTCGGATCTGCCGGCTGCCCTAAGCACCACCGCTACGTGAACTCGCTGGCCGCCGACGCC
CGCGCCATCGTCGTCTCCGTCGACTACCGCCTCGCGCCCGAGCACCTGCTCCCGGCGGCCTACGACGACTCCTGGGCCGC
GCTCAACTGGGCGGTGTCCGGCGCC------GACGCGTGGCTGTCCGAGCACGGCGACCTCGGCCGCGTCTTCTTGGCCG
GCGCCAGCGCCGGCGGGAACATAGCCCACAACATGGCCATCGCGGCCGGCGCGAGCAGCCTCTTCGCCGCGGCGACACGC
CTAGAGGGCGCGGTCTTGCTCCACCCTTCCTTCAGCGGCGAGCAGAGGATCGAGGCGGAGTCAGAGGAGTACAGGGCGAG
CGTCAAGATGCGGTGCTCCGTGATCTTCCCCGGCGCGAGGGGCGGGCTGGACGACCCGAGGATGAACCCGACGGCCGACA
GCGCGCCGAGCCTGCGGACGCTGCCGTGCGGGAGGATGCTGGTGTGCGCGGCGTCGGAGGACGCGAGGCTGCCGAGGGTG
CGGGCGTACTACGACGCCGTGAAGTCCAGCGGGTGGTCTGGGCAAGTGGAGTGGTTCGAGTCGGAAGGCAAGGAGCACGC
CTTCTTCGTCGACGAGCATGGCTGCCGCGAGGCGGTTGCGCTCATGGAACGAGTGGCTGGTTTCATCGCCGGCCATTAAT
AACCGGGCTCTCAAATGTTAAGTGATTTTCCGAAAAATAAATGTGAAGTTATTTTGACTTCACTCAGTATCTTAGTTAGT
ATATGAAATGGAAACTGAATGGTGGAAAGTTTTCTCTCAGAGCCTTGTATTTACAACTCAGGGCAGCGACAGTGGTGCAC
TATAAAAGCTTGTGGAAAATAAAAGCGCCTCT-AAATTCAAGATTTTCCTCTGATTGCTCCTGAAGAATAGCATCCCGAC
AAAATATAACTTGACTAGAAAAGGATGGACAAGAAATGAGCAATGTCAATTTTGCTTTGAGGATGAAA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr5B_1355
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GAAGCTCCCGGTCCTCGTCTACT
TCCACGGCGGCGCCTTCCTCATCGGGTCGGCCGACGACGCCACGTACCACAGCTACGTCAACTCCCTCGCGGCCTCGGCC
TGCGTCCTCGTGGTGTCCGCCGACTACCGCCTCGCCCCGGAGCACCCGCTGCCCACGGCCTACGACGACTGCTGGGCCGC
GCTCCAGTGGGCGGTGGCGCCGTCGACGCAGGACGAGTGGATCTCCGGGCACGGGGACACGGCCCGCCTCTTCCTGGCGG
GCGACAGCGCCGGCGCCAACATCGTGCACGAGATGCTCGTGAGGGCGGCGGTGAACTCCCACCCGAGGA-----------
-TGGAGGGCGCGGTGCTTTTGCACCCGTGGTTCAGCGGGAGCGAGGCGATCGAGGGGGAGCCTCCGGCGGTGCCCATGTT
CAACGGGATGATCTGGTCGTACACGTGCCCGGGCGCGGTGGGCGGCGCGGACGACCCGAGGATCAACCCGCTGGCGCCCG
GCGCGTCGTCGCTGGAGCTGCTGGCGTGCGAGAGGATGCTGGTGTGCGCGGCGGAGAAGGACGTGCTGGCGAGGAGGATC
CGCGCGTACTACGACGGCGTG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr5D_2527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------GGAAGCGCGGT---ACGCAAGCAATCCGGC
GGGTGCTTTTGAGGACCCAAAACCCCACGCGCTCAGGAGGGACCCTGTCTGGACCCGCGGCGGCTATGGGATTCCCTAGG
TCGGTTCGCCCGCTCCTAGAGCCTCGAGGATCGCTGCCCTTCAAGACGAAGAACGAACGATGAACGAGAGAGAAAGAACA
AGGGCGAGATGTAAAAACTAGGGTAAAAAGTAGTATAT-TCATTTGTCGATTGTGTGTTGTTCAATCGGCTGTCACCTCT
CATCTATTTATGAGATGACTAGACTCACCGTACAAGAAAAGTACTAAAATTTCCGTCC-AAAATATAAA-AAACACTAAC
CTAACTCGGGCAGGAATCTTTGGCAATTTTCCGGGTCAACTCGGAGCCACCGAATGGTTTGCTTTGGTCCCACCGAGTGA
ACGTGGCCAACCTTCTGTAATCTTCTGTATCTCGCTCAGAATTTCCGAGTGGTTTCACTCGGAATTACCT--AGTGAACT
CGGTCTCACCGAGTCAAATCAACTCGGTCGGTCCGAAATAACTCTGCAACTTTTGTTTCTGACTTTGTTTTGCCTCCATA
GCTTGCATACGACCTTGGATTAAAATGATTTTTATATCAAAATCAACATTATTTACGAGACGCACAACTTTCATGTTGAA
ACGTTTTC--CATCAGCGGCCATATTAATTGAGTTTCAT---GTCATTCTTTAATCTAGTGTCAACATGAGCATCTCTGA
ACTTGTCATAACTTTTGCATCCGAACTCCGTTTTAGACCATCTT---
>chr2D_2529
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------AAGCGCGGTACGACGCAAGCAATCCGGT
GGGTGCTTTTGAGAACCCGAAACCCCACGCGCCCAGGAGGGACCCCGTCTAGACGCGCGGCGGCTATGGGCTGCCATAGG
TCGGTTCGCCCACCCCTAGAGCCTCGAGAATCGCTGCCCGTCAATACGAAGAACGAACGAAAAACGAGAGAGAAAGAACA
AGGGAGAGATGTAAAAACTAGG-TAAAAGGTAGTATAT-TGATTTGTCGATTGTGTGTTGTTCAATCGACCGTCACCTCT
CATCTATTTATGAGGCGGCTGGACTTCCTGTATAAGAAAAGTAATAACACTTCCGTCC-AAAACATCAA-AAACCCTAAC
CTAACTCGGACAGAAATCTTTGGCAATTTTCCGGATCAACTCGGAGCCACCGAGTGGTTTGCTTCGGTTTCACCGAGTGA
ACGTGGCCAACGTTCTGTAAGCTTCTGTATCTCACTCGGAATTTCTGGTTCGTTTCACTCGGAATTACCG--AGTCAACT
CGGCCTCGCCGAGTCAAATCAACTCGGTTGGTTCGAAATGACTCTGCAACTTCTGTTTCTAACCTTGTTTTGCTTCCACG
GGTTGCATACAACCTCGGATTAAGATTATTTTTATATCAAAATCAACCGATTCGAAGAGACACACAACTTTCATGTTGAA
ACATTTTT--CATCAAAGGCCATGTTAATTGGGTCTCAT---GACATTCTTTAATCTGGTGTCAACATGAGCATCTCTGA
ACTTGTCATAACTTTTGCATCCGAGCTCCGTTTTAGACCATCTT---
>chr7B_2561
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------TTTGAAGACCCG-AACACCACACACCCTCGAGGGACCCTGTAAGAGAGTGCGGCGGCTATGGGATGCCCCAGG
TCGGTCCAACCGCCCCTAGAGCCTCGGGATTCGCAGCTCTCCAACACAAAGAAC-AACAAAGAACGAGTAAGCAAGAACA
AGGGAGAGAC--AAAACGTGGATGAAAAC-TAGTAGATGTGTTTTGTG--------ATTGTTCAATTGGCCGTCACTTCT
CATGTATTTATGAGGCAGCTGGACTTTCCGTACAAGAAAAGGACTAAAAATTCTGCCC-AAAACATC-A-AAACCCTAAC
CTAACTCAGACAGGAATCTTTGGCAATTGTCCGGATCAACTCGGAGCCACCAAGTGGGTTTTTTCGGTCTCACCGAGTGA
ACGTGGCTAACCTTCTGTAATCTTCTGTATCTCACTCGGAATTTCCAAGTGGTTTTATTCGGAATTCCTCCAAGTCAACT
CGGTCTCACCGAGTCAAATCAACTCGGTCGGTCCGAAATGACTCTGCAACTTCTGTTTCTGACCTTGTTTTAGATCCACA
GGTTGGATACGATCTAGGATTAAGACGATCTTTATATCAAAATCAACAGTTTCGATGAGACGCACAACTTTCATGTTGGA
ACTTTTTC--CATTCACGCAGAGCTTAATTGAGTTTTTTCTGGCCATTTTATAATTTGATGTCAACACGAGCATCTATGA
GATTGTCATAACTTTTGCATCTAACCTCCATTTTGGACCATCTT---
>chr4D_2613
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------GCGGTTATGGGCTGCCCTAGG
CCGGCCGAACCGCCCCTAGAGCCTCGGGATAAGCAGCTCTCCAACACGAAG-----------AACAAGGAAGCAAGAACG
AAG--GAGAC--AAAACGTAGATGAAAAAGTAGTAGATGTGTTTTTGTGATTGTGTATTATTCAATCGGCCGTCACGTCT
CATCTATTTATGAGGCGGTTGGACTTCCCGTA-------AGGACTAAAAATTCCGCTC-AAAACATCAA-AAACCCTAAC
CTAGCTTGGATAGGAATCTTTGACAATTTTCCAGATCAACTCGGAGCCACCGAGTGGTTTGCTTCGGTCCCACCGAGTGA
ACGTGGCCAACCTTTTGTAATCTTCTGTATCTCACTCGGAATTTCCAAGTGGTTTCACTCATAATTACCG--AGTCAACT
CGGTCTCACCGAGTCAAATAAACTCGGTCGGTCCGAAATGACTCTGCGGCTTCTGTTTCTAACCTTGTTTTAGCTCCACT
GGTTGCATACAACCTTGGGTTAAGACGATTTTTATATCAAA-TCGACCGTTTCAACGAG--ACACAACTTTCATGTTGAA
ACTTTTTC--CATCAGAGGCCACCTTAATTGAGTTTTTG---ACCATTTTATAATCTGATGTCAACACAAGCATTTCTGA
AATTGTCACAACATTTGCATCTGAGCTCCGTTTTAGATCTTCTTCGT
>chr7D_2673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AAGAACGGACAACGAACGAGAAGAAATATACA
AGGCAGAAGG--TAAAAGTAAAGATAAAAGTCGTAGAT-TGATTGTTTGATTGTGTGTTGTTCAATCGGCCGTCACCTCT
CATCTATTTATGAGGCGGTTGGACTTCCCGTACAAGAAAAGGACTAAAACTTCTGTCC-AAAACATC-AAAAAACCTAAC
CTAACTCGGATATGAATCTTT-GCAATTTTTCAGATCAACTCGGAGCCTCCAAGCGGTTTCGCTCGGTCTCACCGAGTGG
ACGTGGCCAAGTTTCTGTAATCTTGTGTATCTAACTCCGAATGTCTGAGTGGTTTCACTCGAAATTTATG--AGTCAACT
CGGTCTCACCTAATCAAATCAGCTCGTCAT-TTCGAAATGACTCTGCAGTTTTTGTTTCTGACCTTGTTTTGACTCCACA
GGTTGCACACAACCTCGGACTAAGACCTTT-TTATATCAAACTCAACCGTTTCAACGAGACACACAACTTTCATGTTGAA
ACTTTTTTTCCAGCCGAGGCCATCTTAATTGAGTATCAT---GCCATTTTATAATCTGATGTCAACATGAGCATCTCTGA
AATTGTCACAACTTTTGCATCCGAACTCCGTTTTGGACCATCTT---
>chr6B_2740
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GATTGTGTGTTGTTCAATCGACCATCGCCTCT
CATCTATTTATGAGGTACCTGGACTTTCCGTAGACGAGAAGGACTAAAAATTCCATCCAAAAACATA-AAAAACTGTAAC
CTAACTC--ACACAAATCTTTGGCAATTTTCCGGATCAACTCGGACCTACCTAGTGGTTTGCTTCGGTCCCACCGAGTGA
ACATGTCCAACCTTCTATAATCTTCTGTATCTCACTTAGAATTTCCGAGTGGTTTCACTCGAAATTACCG--AGTCAACT
CGGTCTCACCGAGTCAAATCAACTCAGTCGGTCCGAAATGACTTTGCAGCTTCTGTTTTTGACCTTGTTTTGGCTCCATA
AGTTGCATACAACCTCAGATTAAGACATTTGTTATACCAAAATCAACTGTTTCCATGAGACACACAACTTTCATGTTGAA
ACGTTTTC--CATCGAAGGCGACACTAATTGATTTTATA---CCCATTTTATAATATGATGTCAACACGAGCATCTCTGA
AATTGTCATAACTTTTGCATCTGAGCTCCATTTTGGACCATATTCGT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-------------------------------------------------------------------
-----------------------S----S--SS-----------------S--S--------------------------
------S------S--------------S------------------------------------------------S--
--------------------SS------------------------------S----------S----------------
--------------SSSSSSSSSSSSSSSSSS------------------------------------------------
------S---S-----------------S------SS------S--S-S-----S-------S-----------------
------S-------------S--------------------------------------------S-S------------
--------------------S-------S------------------------------S--------------------
-----S---S--S----------------------------------S-----------------S---------S---S
------S-SSSSS------------------S-------------------------------S----------------
-S-S------S-----S---------------------------------------------------------------
--------------------------------------------------------------------------------
----------S----------------S----------------------------------------------------
-----------------------------------------------------S--------------S-----S-----
-------------------------------S---------S--------------------------------------
-------S-----------------------S--------S-S--S-----S----------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S----------------------S----------------------
-------------------------------------------------------SS-----------------------
------------------------------------------------------S-------------------------
---------------------------------------S----------------------------------------
----------------------S---------------------------------------------------------
------------------------------S------------------------------------------S------
-----------------------------------------------------------------------------S--
---S--------------S-------S--SS-SS-SSSSS--SS-SS-S-SSSSSS---SSS--SSS-SSSSSSSSSSSS
---S---------------------S--------SS----------------SSS-SS-S--S---S-------------
-------------------------S---S--S--------------------S---S-S--------------------
----S-S--------------------S---S------------------S----------S-S----SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S----S------S-------
---S-S-----S---S----S--------S----SS--S--S----S----------------------S----------
---S--S--S---------S-----S--------S----------S--------S------------------S--S---
-------------S--S-----S--SS-SS---------------------S---------------S--------S---
S------------------------S--------------S---------------------------------------
--------------------------S---------------S----------------------------S--------
--------------------------------------S-----------------------------------------
---------------------------------S----------S-----------------------------------
-----------S---------S--------S-S--------------S-----------S--------------S-----
-----------------S-------------------------------S------------------------------
--------------------------------------------S--
>forward_90
----------------------------------------------------------------------TTCGATCGCA
ATTCCCCGAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------
>reverse_1403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TACAGCCGCAGTCACGAAG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>forward_891
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GCTGTCTGG
ATAGTTGGGGG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>reverse_2293
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTCAACCGGGACAGTGACAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_2164
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATCGCCGGCCATTGAT
AACT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_3248
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------GGTTTCGACGAGGCACACAA-------------
--------------------------------------------------------------------------------
-----------------------------------------------
