>input_sequence_55772
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-----------------------------------------------------------------CTCCAAACGCAGCTG
ATCACCACCAGCGTTTAAATTTC------------------------------------------------CCTCGCAGC
CGCCGTCGCCATGGGCACCCTCGTCGGCCACGTCGCTCCGGGCGCCGGCTTCCTCCTCATCGGCCTGTGGCAGCTGTTCA
ACCACATCCGGCTGTTCGCGCTGCGGCCCGACTCCTACGCCGCGCCGCTCTGGTTCCCC------GCGCGCGGCGTCCGG
CACCTCGAGCTCATCCTCATCATCGCCGGCACGTCGGCGTCCATCCTGATGGAGCTCGTCATCGGCCCCGCGAAGCACCA
GCCGTTCGACGATGACGGCACCATCCCGTCCGACCACCTCCACAACTTCGAGCACGCGTCCGTCTCGCTCGCGCTGCTCG
CCTTCGCCGCGGTCACCATCCACATGGACAGGGTCCGGGCGCCGATGCGGGACGCCGTGTCGCAGCTGGCCGCCGCCGCG
GCGTTCGCGCAGGAGCTGCTCGTCTTCCACCTCCACTCCACGGACCACATGGGCGTGGAGGGGCAGTTCCACTGGCTGCT
GCAGACCGTCGTCGCCGTCACGCTGGCCACCACGCTGCTGGGCATCCCGTGCCCGCGGAGCTTCGTGGTGAGCCTGGTCA
GGTCCGCGAGCCTCGTGCTCCAGGGCGTGTGGCTGATCGTCATGGGCGTCATGCTCTGGACGCCGGGGCTCGTCTCCAAG
GGGTGCTTCCTCAACCACGAGGACGGCCACGACGTGGTCCGGTGCCGCACCGACGAGGCGCTCCACCGCGCCAAGGCGCT
GGTGAACCTGCAGTTCAGCTGGTACCTGACGGGCACCATGGTGTTCGTCGTCGTGCTCTACCTCCAGGTCAGCAGGCTGT
ACCCCGAGGAGCCGCAGTACTTGCCGCTGGTCAAGGGAGGACCCGCCGGCGGCCGGTTCAGCGTCGGGGACGATCACGAG
GAC---------GAGGATGACATGGAGGCCGCGAAAAGTACTTATTACGGGCAGATGGTCAGCGGTGGCACAAAGCCCAT
GGAGGTAGAGAGGTAAAACTGAAGCTGTATACCGT-------ATGAAAGGAGGGAACGGTCAAGATGGAGGGTTGTATAG
TATAACAGTGGGTATATGTTCTGTAATCAGTAGGGTTGGGGTGCTGTAGATTG-----TATAGTTTTTTTTCTTTTCACT
TTTGTGGACTTGGT-TTCACCGAGTGAACTGACCCGTAAATG----------TCGTCGTTGGTCACTTCAATTTGTTTGT
TTAGC--C---CTGGCTTGTTGGTCTGATCATCGGAGTAG---AATGGATTCATGGCTGGCTTGTGGATGGAGA------
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>chr5A_1_TraesCS5A01G231300
GGGGGGAAAGGAGACATAGGTTTCAGCGTGTACCTCTCTTCGCTTAATTGTGTGCGTGCAAGTTTTTTTAAAGCACTTCA
CCCAAATCCCTGGTTTAAGATACCGTCCTAGGCTTACACAAGCAAACACATCAGCATGAATCGGATGGGCCAAAAAATAT
ATTTTTTGTTGAAAAGTATTTCTTTTGTCAGAAACAACAAACGCGGTTGGCGTGGACATCTCGACATCCCTGCCATTGAG
ACGTAAGATTAAGGGGATGTGAGTTCGAGTGTCTAGTGAATTATCCAAGTGCAAGTGCCCTACCAAATGTCTTTTACCTA
GACATCATCTTAGGCTTATCTGTTTAATTATACGTGTGCAAGTATCCTATGAAATGTTTCTTGTCTAGACACCATCCTGA
GCTTACAAGACGTTATGCAACACACAAAAATAGCCGAAGAAGCAAAACAAAAAGATGTTTTTCATTTTAAAAGTAGTAAT
TAATTGATTGCATGCACGAACAATTAAATTGATACTCCT-----------------------------------------
----------------------------------------------------------------------TGCTACAACA
ACCGTGCTGCTACGACAAACAAAAAATAACTATGGAGACCTTAGTGAGAAATGTGTAATATAAGTCAAACTATGGAGACA
ACGGCTTGATTATCAACACTAGTTGAACTAGAAATACTAACGTTAGAGGATCTCATTCTCATC-----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
TATCTTATCTTAACTA--------------------------------ATGTACTCAACAATCTTCAAGAGAATAAATAA
TTAGTCGTATTACACCGCACGCAAATAAAAGAGAAATAAAACCCTCATCTTGGAAGCCCAAGCAAGTAAGCAAAACAGAA
TGA-------G------AAAGGGATTGAAAAAGATAAGCTACCGGAATAACACATCACTGCTGAAGTGCTGCCGAT----
TGAGATTGTCCAAATCCATTTT----TGTAAAATAAGACAACTTTTCAAACCTTGCAAGCCACCGGAACTCTCCAGAGAG
TCGACCATCCAACCTTCTTAAACCCCATGGGCCATGATGGTTCCC------ATCAGCCATTCAAACTCCAAACGCAGCTG
ATCACCACCAGCGTTTAAATTTC------------------------------------------------CCTCGCAGC
CGCCGTCGCCATGGGCACCCTCGTCGGCCACGTCGCTCCGGGCGCCGGCTTCCTCCTCATCGGCCTGTGGCAGCTGTTCA
ACCACATCCGGCTGTTCGCGCTGCGGCCCGACTCCTACGCCGCGCCGCTCTGGTTCCCC------GCGCGCGGCGTCCGG
CACCTCGAGCTCATCCTCATCATCGCCGGCACGTCGGCGTCCATCCTGATGGAGCTCGTCATCGGCCCCGCGAAGCACCA
GCCGTTCGACGATGACGGCACCATCCCGTCCGACCACCTCCACAACTTCGAGCACGCGTCCGTCTCGCTCGCGCTGCTCG
CCTTCGCCGCGGTCACCATCCACATGGACAGGGTCCGGGCGCCGATGCGGGACGCCGTGTCGCAGCTGGCCGCCGCCGCG
GCGTTCGCGCAGGAGCTGCTCGTCTTCCACCTCCACTCCACGGACCACATGGGCGTGGAGGGGCAGTTCCACTGGCTGCT
GCAGACCGTCGTCGCCGTCACGCTGGCCACCACGCTGCTGGGCATCCCGTGCCCGCGGAGCTTCGTGGTGAGCCTGGTCA
GGTCCGCGAGCCTCGTGCTCCAGGGCGTGTGGCTGATCGTCATGGGCGTCATGCTCTGGACGCCGGGGCTCGTCTCCAAG
GGGTGCTTCCTCAACCACGAGGACGGCCACGACGTGGTCCGGTGCCGCACCGACGAGGCGCTCCACCGCGCCAAGGCGCT
GGTGAACCTGCAGTTCAGCTGGTACCTGACGGGCACCATGGTGTTCGTCGTCGTGCTCTACCTCCAGGTCAGCAGGCTGT
ACCCCGAGGAGCCGCAGTACTTGCCGCTGGTCAAGGGAGGACCCGCCGGCGGCCGGTTCAGCGTCGGGGACGATCACGAG
GAC---------GAGGATGACATGGAGGCCGCGAAAAGTACTTATTACGGGCAGATGGTCAGCGGTGGCACAAAGCCCAT
GGAGGTAGAGAGGTAAAACTGAAGCTGTATACCGT-------ATGAAAGGAGGGAACGGTCAAGATGGAGGGTTGTATAG
TATAACAGTGGGTATATGTTCTGTAATCAGTAGGGTTGGGGTGCTGTAGATTG-----TATAGTTTTTTTTCTTTTCACT
TTTGTGGACTTGGT-TTCACCGAGTGAACTGACCCGTAAATG----------TCGTCGTTGGTCACTTCAATTTGTTTGT
TTAGC--C---CTGGCTTGTTGGTCTGATCATCGGAGTAG---AATGGATTCATGGCTGGCTTGTGGATGGAGATTGGAA
TTGCACCTTTTTTTGTGTGTGT-----GTTCTTGATGATTGTACCTTAGAGCTTGCCGTAAATGACTTGCGCTG------
--------------------------------TCTTTTCTCATCAACCTGCGAGTCCAATCCAATGTGTCGCTTTCGATG
TTAG----------------------------------------------------------------------------
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--------------------------------------------------TTGCTAGCATCTTATTTATCCTGGACCGGC
TTATAGCAATTGCTAACGATTTGCAAGGCAATTT----------------------------------------------
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------------------------------------------ATGTTGGCCGGTGCTGGATTTGTCGTGCTTGTAAAC-A
AATTTACCATCTTAGCGACAATATAAATTGCA-ATAAAAAATATTCGATTTGTCATCCCCTCCCAACAAACTTCAGCTGA
ATAACATTACTTATTATCTTTCAGCTGGTTTACGGGAATAATCATCGACTCCATTTCCCTGGAAAAACAACAAAATAGTA
TCATCGCGCCAACGATACATGTATGTATGAGCGTTTGTGTTTATACTGATGTGTTAAAAAAAGAAAATAGTATCACTGTG
CCAACGAACAACTCGAGTGCAGAACATGGCTTGTAC-------------------------GGAAGAGAATTTGTGGCAA
GCAGACGTTGGGACACCAAGTTACTCGCACGTGCCTTTTCTTTTGACTTTCGATTTCTAAACTTTCTTATCTTTTGAATA
CAAAGTCTAAATAAAGTTTTATTTTCATATTCGTGTGTTTCTCATGTCGAGGCTTTCAAATAAGAACCATTTTAAATATG
TTCTAAGAAGCTTCTAAAATAAATGTTAAATTTCAACTCTTAAAACTCAGTACGAGCAACCGACAAATCATGATTATTTT
TCCTTATTGCCGACAAAAAATCTGTTAAAATTTTATCTATTGATAAGAGCGACTGAACGACGGCGGTCGGAATCTCCTTT
GGCGACTAGGAGAATAATAAGCCCAGCAGCCGTAGCAGCGGCCGTGCCTCTGACGGACGAAGAGTTCGTCCATCAGATGG
ACCGACGCCACCATTGTTGGCACGGGTCAAGGAGGAGCCACCATCCCCATCACACTACTGCGGCGGTGTCTAGATTGG
>chr5A_498
GAACATAAAAATGAACA---------------------------------------------------------------
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------------------------------------CCT-----------------------------------------
----------------------------------------------------------------------TGCTAGAATA
ACCATGCCGCTATGACAAAAAGAAAGAACCACCA---ACCTTAATGAGAAATGTGTAATATAAGTCAAACTATGGAGACA
ACAACTTCATTATCAAC--------AACTAG---TACTAACATCAGAGGATCTCATTCTCATC-----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
TATCTTATCTTAACTC--------------------------------GTGTACTCAACCATCTTGTAGAGGATAAATAA
TTAGTCGTATCACACCACACGCAAATAAAAGAAAAATAAAACC-TGATCTTGGAAGCCCAACCAAGTAAGCAAAACAGAA
TGA-------G------ACTATCCCTGAGCTCT-----------GAACAACACATCACTGCTGAAGTGCTGCCGATCGCG
CGAGGTTGTCCAAATCCATTTT----TGTAAAATAAGAGAACTTTTCAAACCTTGCAAGCCACCGGAACTTTCCAGAGAG
TCGACCATCCAACCTTCTTAAACCCCATGGTTCCCAATC--TCCC------ATCAACCATTCAAA---------------
----------------------C------------------------------------------------CCTCGCAGC
CGCCGTCGCCATGGGCACCCTCGTCGGCCACGTCGCTCCGGGCGCCGGCTTCCTCCTCATCGGGCTGTGGCAGCTGTTCA
ACCACATCCGGCTGTTCGCGCTGCGGCCCGGCTCCTACGCGGCGCCGCTCTGGTTCCCC------GCGCGCGGCGTCCGC
CACCTCGAGCTCATCCTCATCATCGCCGGCACGTCGGCGTCCATCCTGATGGAGCTCGTCATCGGCCCCGCGAAGCACCA
GCCGTTGGACGACGACGGCACCATCCCGTCCGACCACCTCCACAACTTCGAGCACGCGTCCGTCTCGCTCGCCCTCCTCG
CCTTCGCCGCGGTCACCATCCACATGGACAGGGTCCGGGCGCCGATGCGGGACGCCGTGTCGCAGCTGGCCGCCGCGGCG
GCGTTCGCGCAGGAGCTGCTCGTCTTCCACCTCCACTCCACGGACCACATGGGCGTGGAGGGGCAGTTCCACTGGCTGCT
GCAGACCGTCGTCGCCGTCACGCTGGCCACCACGCTGCTGGGCATTCCGTACCCGCGGAGCTTTGTGGTGAGCCTGGTCA
GGTCGGCGAGCCTCGTGCTCCAGGGCGTGTGGTTGATCGTCATGGGCGTCATGCTCTGGACGCCGGGGCTCGTCCCCAAG
GGGTGCTTCCTGAATCACGAGGACGGCCACGACGTGGTCCGGTGCCGCACCGACGAGGCGCTCCATCGCGCCAAGGCGCT
GGTGAACCTGCAGTTCAGCTGGTACCTGACGGGCACCATGGTGTTCGTCGTCGTGCTCTACCTCCAGGTCAGCAGGCTGT
ACCCCGAGGAGCCGCAGTACTTGCCGCTGGTCAAGGGAGGACCCTCCGGCGGCCGGTTCAGCGTCGGGGACGATGACGAG
GACGATGACGACGAGGATGACCTGGAGGCCGCGGAAAGTACTT---ACGGGCACATGGTCAGC---GGCACAAAGCCCAT
GGAGATAGAGAGGTAAAACT----------------------ATGAAAGGAGGGAACGGTGAAGATGCAGGGTCGTATAT
GT-------------------------------------GGTGCTGTAGATTTGTATATATAGTTGTTT-------CAAT
TTTGTGGATTTGGTGTTCACCGAGTGAACTGACCCGTAAATGCGGGTCAAGTTCAATTT---------------------
--------------GCTTGTTGGTCTGATCATCGGAGTACTACAATGGATTCATGGCTGGCCTGTGGATGGAGAGTGGGC
TTGCACCTTTTGTGTGTCTTCTTGA------TTGATGATTGTACCTTAAAGCTTGCCGTAAATGACTTCTTTTAGGCCCG
GCAGTCGTCCCCGGCGCTTTCATTCCTCGCTCTCTTTTCTCATCAACCTACGAGTCCAATCCATTGTGTCGCCTTCGGTG
TTACTAGATCATAATGGCGCGCGTTGCTGCGCTCGTCCTTTATATTTGTATAATATATAATGAGCATAATATCATAAACA
TCTGAAAACATCAAATATGAAAGTTAAGTTTGCATATCTTTCTCATATTATGCCACTAATTAAAGAGGAGAAATTTATGC
ACAAAAGTAGTAGGATATATGTCAAGACTTTGAGTACTTTCAATTACAGTGCCACGATGTAGATGGCGCGTGGGTTACAT
TTGTTCAGGGCTTTAGGTATACGATCATGAAAATCAACATGCTGGAATGACCCCATTGCACAAAAGGTGATGGGGCAAAG
TCGATTTTGTACTGTTGATGTAACTTAAATTTATTTATCAATTGAGAATTTTTATCCCGCTGCGCGTACAAATAGCACCA
GCCAGATGGTTTAACATGAGGAATCTTTGCTACAGTATGCTGGAATAATTATGTCATTGTTAGATGACAGCTCAAAGAAA
ATTCTTAATCTGAAAACCACTTAAAATTACATGGTAGATCTCTCGATTCCTGAACCTAAAATATCGGATACAAAGATGTA
CTCCCTCTTTTCCTGAATATAAGGCTTTTTAGAGATTTCAATATAGACTACATACGGAGTAAAATGAGTGAACATACACT
CTAAAATGCGTCAATATATATCCGTATGTAGCCCGTATTGAAATCTATAGAAGGTCTTATATTTAGGAATGGAGTGAGTA
GCATGCATGACAAACCGAACTATTTTTTCCGATTATATGCAGCGTTCTTATTTTGCCAGATGAATATCTTGAACATTTTC
TTTAAACCAAATAGGCATTACGCTGAACTCTTTTTTTTCAATTTCTTGGAAAAATGAGTTAAAACATGCAAGGATACTTA
GTGTTGATTTCACGAGGCAAATAGAAACTGCTCGGATCTACTAACCTTTATATAAGCAGCTCATCCAGCCTTAAAATCCA
GCCTTGGAGCAGCAGAAATCAGAGCAGAGCGTTTCACCACCCCACGTAGCAGGCAGGCAATGGAGATGGCTCAGCGAAGG
ATAGCTCATGCGATTCTACCTCGTCGGTGTCCTCAATGGTTGACTTTAACTCCCCGTCTCCTCACGGTCGAGGCCCACGC
GCCCAGCTTCAGGCGCGGAACATCGGAGGCCGTACTACGCTAACCTAGCATCCAAGGTACATCCAGGGAAGGACGCCGGC
GGCGCGTGCCACCATGGCCACCATGGAAGAACGCAACATACAATAGGAGATTGAAAAGATGGGACACAGTGACGCACCTG
TAGTCCTCTGCATGGAGGGTAGAGGACACGTACGTCGATGCACATCTGTAGTAGCATCTCGCAACCGGGAGGCATGACGA
CGACAGCGGGCGCCGCCGCCGCCGCGACTCGGCTCGCCTATTAGGGATGGAATTTTTCGGGGAAGACAGAAGAGGCATTT
TTAGGAATGGATAGGCAGGGAACACGCCGAGTTTGTGCACTTTCGAGCGGGCCTCCGTGGTCCATCGACTGGGACGGCCC
GATTAACGACAGCAGGTCCAACACGTTCTGCAGAGCAGCTGCCCAATCATTTTGGGCCGAGTGGGCCGCGCCGGGGACAA
GTAAATAATTTCCACAGACTACAGTGGGATGGCTGAGCTGATCCAGGACATTAGTGAAGGAGATCCGACGGCTCTGGGGT
TCAAATCGTTGTGGAGGGGCGTAGGTGGGCTGAGTTATACTGTTTAGTAATTGCTAGCATCTTATTTATCCTGGACCGGC
TCATAGCATTTGCTAACGATTTGCAAGGCAATTTTTCTTTCGGAAAAACTTCCAATATATTCATCTTTAATCATGGTAGT
ACAACGAATATTAAAAATAATAAAAAATCGAAAACACTAACGCCCACACGTATGGGTGTTTGCATCCCGCCCACACTCGT
GGATCCACGTCCGTTTGTGATGGTGGCGGAGGCAGAACTTTTGTGGAGCTTGGGCAAGTTGAGCCTAAGTGTATAATCTA
GAAATCAAAAATCGGGTATTTGGATACACATCATGTAATATATCACCAAACTTCTGAATGACAAATCCACATTAATAACG
AAGTGAAAACATAAATATGATAGTCACACAAAATGTAATTTAAAGTGAAATTAATATATCATATATCAATATCTATTTCA
TAGACCAAATAAAGTTGAGACTTCACAACAAAAGATAAATAACTAGCCTTGCACAGAGGCAAACTCGCAATGTTGTCAAC
AAAAGTAAAGCTATCCATACCTAGATGTCATCAGGTGTGATCTTGCAACTTCTTCCACCACAGTCAAAAGAATCTCTCAT
TTGTTCATTTTTGCCAAACAAAGACATACAATCACCCTTCCATAGAGGCAAACCCGCCATGTTGCCAAAGTCCTAGGAGG
CACTACAAGATAGAAAATGGATTTGTAATTAAGTTGTGAGATGTGAATATATTAAATCTTGAAAGCTTGCAAGAATAGAG
ATGGCCAGATGGAACATACGGACAGTGCACTAAAGAAAATCACGGGGCAAATACCCTTTCCGAGACCTCATTGCAGTAAA
TGTTTGAATAATATTTTTATCATCAACTGAGTTGAATAACTCCTGTTTGGTCTAACATATCATCAAGGTCATTGAACCAT
TCATTATTTCCGGTTGGCAATGTTAGGCGGTGGTTGTGCCTCAACTTTTATTTCCGGTTGCACACCATTCACATTTTCAG
TGCTTGCTCTATTCACCAAAAACCTCCTCATCTTTGAAATTTAATGAAAAAATTTGAAGTTAGTTGTCACACAAGTAAAT
AAAAAAATCAGCTACAATAAGTAAAAACAGTACAATCTTTAGGAAAAAAAGTAACAATACTACATAACTACTTACACATA
AACTACATGTATTGTATCAAAATTCCTTAAAGCCGTCAACGAAGCATTACCTAAATTTAAGCCCCAAATCTATTGGTTCA
TTGCAGATTGCCAAATGGCTTTTCTGATTTAAAGAAATCAACAAACACATTAAATCAGAACTATTTCTGGAGGCATGTAG
TAGTACTGTAGAACTAATTAACACTTTAACTAACATCATAGCATAGAGGAGCGCAGAGCTGCTGCTGTTTTGAGATTCTA
CAGGAGGTCTTGGTTGTGCTTCAATCCCTAGTCTTGACCAGTTACTCAGAGATGACTAGATGAGGGATCCCTAGCACCTA
GCCCTAATTTCCATGGAGAATTCTTAGCCAAGGAACTGTGCCAAGGATGAGATCATGAGAGGAAGGAGTAGCCTTGCCTG
GGCGCAGGACGTCCGCTCGCCGCGGCCCCGTCTCGCCGTCTAGGGCAGTAGGGCTCTAGGCTAACCGCCGCCCCCGTCGC
CCAGTGCCCTGCGCTCGGCGCTGTGAGAAACGAAGAGACAGGAGCGATCGATCCAACCACGCGTACTTTTTGTTTAGAAC
AAACCACACTGTACATACGTTTTTTTAGACAGACACCGTGCGTACGTGTATTCCCTCGGGTCGTGAACTGTTGGTTGGGC
TGCGGACTCTCTCCTACGGCTGCCTGTTGGGCTGTGAACCATTGAGAAACGAAGGCCCAAATTATTTTTGCCCAGATAAA
GCAAGCTACCAACAGCATTCGGCCTTTGTTAATCCATTGAGCGCTACTGTCGGGGAGCCAGCGAGCCCGGACAAGTGTCC
AGGGTCGCCGGGCGGTGCCTCCGCCACCGGTTTGTGGGTACACAAATCTTGACTTGTTTATGGTGTCACGTAGGACTGAG
CTGGTGTGTGGGCATTCATTCGGTCTTCCATACGTCCGTTTCATCACTAGGAGGGGCCGGTGTGTGGGTGTTTAGCAGTT
CGCCCACACGCCAGTTTTCACTTACGCACAAGGGCTGGTGTGTGGGCATTTGCCATCTCGCCCACACGCCCGTCTTCTTT
CCCACACCCAAGCTGCCAGTCGCCATGCGCTTTGCAGTGTATTTGGCAACTGCCCTAATGTGCTTGTAAGCATATGGCAA
TTCTTTCTTTTTTTACCCGAACATGTTAGTTGCCATATGTTTTGCAGGGTACACGGCAACTGCCCTAGTGTGCTTGTAAG
CAGATGTCAACTCACTCTTTTACCCGAACATATTGTTTTGTCATGTCTCTTTGTTGCGCTACACGGCAACTGCCTAGTGT
TAGTAGGTGGCAACTCCTAAGGTTTTCAAATTACGACAACTGCAGTAAACCAGACCATACATGGTAACTGCTTAGTGTTA
GTAGGTGGCAACCTCTAAAGTTTTCAAATCATGGCAACTATAGTAAACCAGATTAGACATGGCAACAACTGATGTTGTCC
AAAATGGCATCTGACACTTGACCTGAGATGGCAACTACAGTTGAGCAACCATGGCAACTGTAGTTGTCTGACATGGCAAC
TGTAGTTCAGCGACATGGCAACTGCAGGTAAATGGACATTGAAGAGGGTCCGGACCATGGCAACTGTGGGGACGCGTGTT
GACTGTCACACTGGGCGTGCGGGACCATGAGGTAGGTGGCTGAGAGAGGTCGTGTGGGCGTTATGCATTTTGCCCATACA
TAGGCGTGTGAGAGGGACCGCTAGGGAAAAAAGAGGCGTGTGGGCGCTAGTTGTTTTGCCTACACATAGGGGTGTGGGCT
AGTCTTCTTAGACACCACACAAAACGTGTGGGCAGACCCCTTAACGCCCACACGTGTGGCAGTTATCGTCGTCCTAAAAA
TTACAAGATCCGAAGACCACCTAGAGACGACTACAAGCACTAAAGCGAGCCGAAGGCGCGCTGCCGTCATCACTTTTCCA
TCGCCAGAGTCGGACACAACTTGTTGTAGTAGACAGTCGGAAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCGCACCAG
GACAGCAACCGCCGCCGATGAAGAATAACGTAGGTTGGAAGAATTCAACCGGAAGACACACGAACGTAGACGAACAACGA
AGAGATCCGAGCAAATCCACCAAAAATAAATCAGCCGGAGACACACCTCCACACGCCCACCAACGATGCTAGATGCACTG
CCGGAACGGGGGCTAGGCGGGAAGACATTTATTCCATCTCCAGAGAGCCGCCGCCGTCTCGCCTTCCTGAGCAGGACACA
AACCCTAACAAATCAGGAAAAAAACGACTGAAAACGAAGCCCTCCCGCCGGCCCTTGGCAGTATCCACCGCACCCATAAC
CCTAGGGCCATCGGAGACGAGGCGGACCTGCGACGGCGCTGGTGAGAGGCAGAAACCCTAGCTTTCTTTCTTGAAGGAGG
AGGAGCGAAGAGTTAAGCGAAAAACGATTTGCAAGGCAATTTATGTTTGCCATGGCTGGATTTGTCATGCTTGCAAACTA
AATTTATCATCTTAGCAACAATATAAAATTACCATAAAAAATGTTCGATTTGTCATCCCCTCCCAACGAACTTTAGCTGA
ATTGCATTACTGTTTATCTTTCAGCTGGTTTACGGGAATGATCATTGACTCCATTTCTCAGCAAAAACAACAAAG-----
-------------------------------------------------------------------TAGTATCACCGCG
CCAACGAACAACCTGAGTGCAGAACATGACGGAAACTAAATATATTTGCTAAATCAAGAATGGAAGAGAATTTGTGGCAC
GCTGGTGCTGGGACACCGAGTTCCACGCACATGCTTTTTCTTTTGGCTTTCAATTTTTAAACTTTCTTATCTTTTGAATA
AAACGTTCAAATTAAGTTTTATTTTCATATTCGTGTGTTTCCCATGTGGACGCTTTCAAATAAGATCCATCTTTTCTCGC
---------------AAAAATAATAAATAAGATCAACTCTTCAAACTTAGTT------ACCGATAAATCATGATTTTTTT
CCTATTACTGACAGAATGCT----TTAAAATATTATCTATTGATAAGAGCGACTGAGCGA--------------------
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------------------------------------------------------------------------------
>chr5D_514
AGAAAAAAAATACTCGTATCACACTGCACGCAAAAAAAAGAAAAATAAAGCCTTGGTCTTGGAAGCTCAACCAAGTAAGC
AAAACAGAATGAGAAAGGGACTATCCATGAGCTTTGAACACATCAGTGCTGAAGTGCAGCCGATCGAGGTTGTCCAAATC
CATTGTAAAATAAGAAAACTTTTCAAACCTTGCAAGCCACCGGAACTCTCTCCAGAGTCGACCATCCAACCTTCTTAACG
TGCTTAACATATTTGACTCCCAAGAAGCAAAGAGTAAGATATTTGGAAAAGCAAGATGTGTTAATATTGACAAAAACGCC
CAGCATGGTTCTCGTGGACATATGAAAATCCCTATCATGGACAATTAGGAAAGAGGAGACGAGAGTTTCAATATGTACAG
TCAATTTAGGTATATGCGTGCAACAATCCTACGAAATGTCCCTCGTCTAGACACCATCTTGGGCTTACACGAGGTTATGC
AAGCAAACAAAAATACTTGAGAAGCAAAACAAAAATATATTTTCCTTTGAAAAGTAATTAATAGAAAATTGATCCTGTCA
AAAACATCCAGTAACGCACGCATGCACAACTAAATTGATGTTGTATGCGGAGAATATAAAAAAAACACCATGCTAGATTA
ACCATGCCGCTACGACAAAAAGAAAGAACTG-CA---ACCTTAGTGAGAAATGTGTAATATAAGTCAAACTATGGAGACA
ACGGCTTGATTATCAACACTAGTTGAACTAG---TACTAACGTCAGAGGATCTCATTCTCATC-----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AC
TATCTTATCTTAACTA--------------------------------ATGTACTCAACAATCTTCAAGAGAATAAATAA
TTAGTCGTATTACACCGCACGCAAATAAA-GAGAAATAAAACCCTCGTCTTGGAAGCCCAAGCAAGTAAGCAAAACAGAG
ATGAGAAAGGG------ACTATCCCTGAGCTTT-----------GAACAACACATCACTGCTGAAGTGCTGCCGAT----
GGAGGTTGTCCAAATCCA--TTTGTATGTAAAATAAGAGAACTTTTCAAACCTTGCAAGCCACCGGAACTCTCCAGAGAG
TCGACCATCCAACCTTCTTAAACCCCATGGGCC---ATGGTTCCC------ATCAACCATTCAAACTCCAAACGCAGCT-
-------CCAGCATTTAAATTTCCCA------CCTCCCCGCACTCTGCATCCCCGATTGCCCGTCGCAGCTCCTCGCAGC
CGCCGTCGCCATGGGCACCCTCATCGGCCACGTCGCGCCGGGCGCCGGCTTCCTCCTCATCGGCCTGTGGCAGCTGTTCA
ATCACATCCGGCTGTTCGTGCTGCGGCCCAGCTACTACGCCGCGCCGCTCTGGTTCCCC------GCGCGCGGCGTCCGC
CACCTCGAGCTCATCCTCATCATCGTCGGCACGTCGGCGTCCATCCTGATGGAGCTCGTCATCGGCCCCGCGAAGCACCA
GCCGTTCGACGACGACGGCACCATCCCGTCCGACCACCTCCACAACTTCGAGCACGCGTCCGTCTCGCTCGCGCTGCTCG
CGTTCGCCGCGGTCACCATCCACATGGACAGGGTCCGGGCGCCCATGCGGGACGCCGTGTCGCAGCTGGCCGCCGCCGCG
GCTTTCGCGCAGGAGCTGCTCGTCTTCCACCTCCACTCCACGGACCACATGGGCGTGGAGGGGCAGTTCCACTGGCTGCT
GCAGACCGTCATCGCCGTCACGCTGGCCACCACGCTGCTGGGCATCCCGTACCCGCGGAGCTTCGTGGTGAGCCTGGTCA
GGTCGGCGAGCCTCGTGCTCCAGGGCGTGTGGTTGATCGTCATGGGCGTCATGCTCTGGACGCCGGGGCTCGTCTCCAAG
GGGTGCTTCCTCAATCACGAGGACGGCCACGACGTGGTCCAGTGCCGCACCGACGAGGCGCTCCACCGCGCCAAGGCGCT
GGTCAACCTGCAGTTCAGCTGGTACCTGACGGGCACCATGGTGTTCGTCGTCGTGCTCTACCTCCAGGTCAGCAGGCTGT
ACCCCGAGGAGCCGCAGTACTTGCCGCTGGTCAAGGGGAGACACGCCGGCGGCCGGTTCAGCATCGGGGACGATCGCGAG
GACGATGACGACGAGGAGGACCTGGAGGCCACGAAGCGTGGC---TACGGGCACGTGGTCAGCGGTGGCACAAAACCCAT
GGAGGTAGAGAGGTAAAACTGAAGCCGTATGCCGTGTGAACGATGAACGGAGGGAACGGTCAAGATGCAGTGTCGTATGT
T---ACAGTGGGTATATGT-------TCAGTAGGATTGGTGTGCTGTAGATTG-----TATTTTTTTTT-------CACT
TTTGTGGATTTGGT-TTCACCGAGTGAACTGACCCGTAAATGCGGGTGAAGTTCGTGGTTGGTCACTTTGATTTGTTTAT
TATTTAAC---CTAGCTTGTTGTTCTGATCATCAGAGTAC---AATGGATTCAGGGTTGGCCTGTGGATGGAGAGTGGAC
TTGCACCTTCTTTTTTTTTCTTTTTGCGTTCTTGATGATTGTACCTTAAAGCTTGCCGTAAATGACTT------------
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>chr5B_570
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----------------------------------------TTAGTGAGAAATGTGTAATGT-AGTCAAACTATAGAGACA
ATGGCTTGATTATCAACACTAGTTGAACTAG---TACCAACGTCAGAGGATCTCATTCTCATTCAGTAGCGGATCTAGCC
CATTGGGTCAGGGTGGGCCAACAAGAGAGTTGTTCATATAAAATATTTTTTCTTAATATTTTTTTACCTTTTTTCCTATA
CTATAAAGCTATTCAAAAAATCCCAGGGTGGGTCCTGGCCCACCCTGTCCACCCTCTGCCTCCGCCACTATTCTCATTAC
TATCTTATCTTAACTCATGTACTTTATCGCAAAAAAAAAAAAACCCTCATGTACTCAACAATCTTCAAGAGAATAAATAA
TTAGTCGCATTACACCGCACGCAAATAAAAGAGAAATAAAACCCTGATCTTGGAAGCCCAAGCAAGTAAGCAAAACAGAA
TGA-------GAAAGGGACTATCCCTGAGCTTT-----------GAACAACACATCACTGCTGAAGTGCTGCCGAT----
CGAGGTTGTCCAAATCCA--TT----TGTAAAATAAGAGAACTTTTCAAACCTTGCAAGCCAACGGAACTCTCCAGAGAG
TCGACCATCCAACCTTCTTAAACCCCATGGGCC---ATGGTTCCCATCAAGATCAACCATTCAAACTCCAAACGCAGCTG
ATCACCACCAGCATTTAAATTTCCCTCCTCGTCCTCGCCGCACTCTGTATCCCCGATTGTCCGTCGCAGCTCCTCGCAGC
CGCCGTAGCCATGGGCACCCTCGTCGGCCACGTCGCGCCGGGCGCCGGCTTCCTCCTCATCGGCCTGTGGCAGCTGTTCA
ACCACATCCGGCTCTTCGTGCTGCGGCCCGGCTCCTACGTCGCGCCGCTCTGGTTCCCC------GCGCGCGGCGTCCGC
CACCTCGAGCTCATCCTCATCATCGCCGGCACGGTGGCGTCCATCCTGATGGAGCTCGTCATCGGCCCCGCGAGGCACCA
GCCGTTCGACGACGACGGCACCATCCCGTCCGACCACCTCCACAACTTCGAGCACGCGTCCATCTCGCTCGCCCTGCTCG
CGTTCGCCGCGGTCACCATCCACATGGACAGGGTCCGCGCGCCCATGCGGGACGCCGTGTCGCAGCTGGTCGCCGCGGCG
GCGTTCGCGCAGGAGCTGCTCGTCTTCCACCTCCACTCCACGGACCACATGGGCGTGGAGGGGCAGTTCCACTGGCTGCT
GCAGACCGTCATCGCCGTCACGCTGGCCACCACGCTGCTGGGCATCCCGTACCCGCGGAGCTTCGTGGTGAGCCTGGTCA
GGTCGGCGAGCCTCGTGCTCCAGGGCGTGTGGCTCATCGTCATGGGCGTCATGCTCTGGACGCCGGGGCTTGTCTCCAAG
GGGTGCTTCCTCAATCACGAGGACGGCCACGACGTGGTCCGGTGCCGCACCGACGAGGCGCTCCACCGCGCCAAGGCGCT
GGTCAACCTGCAGTTCAGCTGGTACCTGACGGGCACCATGGTGTTCGTCGTCGTGCTCTACCTCCAGGTCAGCAGGCTGT
ATCCCGAGGAGCCGCAGTACTTGCCGCTGGTCAAGGGAGGACACGCCGGCGGCCGGTTCAGCATCGGGGACGATCACGAG
GACGATGACGACGAGGATGACCTGGAGGCCACGAAGCGTGGC---TACGGGCACGTGGTCAGCGGTGGCACAAAACCCAT
GGAGTATGATTA--------------------------------GAACGAAGGGAACGGTAAAGATGCATGGTCGTATAT
T---GCAGTGGAGATATGT-------TCAGTAGAATTGGTGTGCTGTAGATTG-----TATAGTTTTTT-------CACT
TTTGTGGATTTGGT-TTCACCGAGTGAACTGACCCGTAAATGCGGGTGAAGTTCGTGTTTGGTCACTTCAATTTGTTTGT
TTAGC--CTGGCTGGCTTGTTGGTCTCATCATCGGAATACTACAATGGATTCGTGGCTGGCTTGTGGATGGAGAGTGGAC
TTGCACCTTTCTTTTGTGTGT------GTTCTTGATGATTGTACCTTAAAGCTTGCCGTAAATGACTT------------
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>chr3A_1055
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-------GCCATGGGGTCCCTCATCGGCCATGTTGCGCCGGGAGCCGGTTTCCTCCTCATCGGCCTGTGGCATCTCTTCA
ACCACATCCGTCTGCTGGCGCTGAGTCCCAGCTCCTACGTCGCGCCGGTCTGGTTCCCGTTCCCGGCGCGGGGCCTCCGG
CACCTCGAGCTCATCCTCATCATCGTCGGGTCGTCGGCGTCCATCTTCATGGAGCTCTTCGGCAGCCCCAGGAAGCACCA
ACCGTTCGACGACGACGGCACCATCCCCTCCGTGCACCTCCACAACCTGGAGCACGCGTCCATCTCGCTCGCGCTGCTCC
TCTTCGCCGCGGCCACCCTCCACATGGACAGGGTCCGGGCGCCCATGCGGGACGCCGTCTCGCAGCTGGTCGCCGCCGCG
GCGCTCGCGCAGGAGCTGCTCATGTTCCACCTCCACTCCACGGACCACATGGGCGTGGAGGGGCAGTTCCACTGGCTGCT
GCAGGCCGTCATCGCGGTCACGCTCGCCGCCACGCTGCTGTGGTTCGCCTGCCCTGGGAGCTTCGCCGTGAGCCTGGTGC
GGTCCGCGAGCATCGTTTTGCAGGGCGTCTGGTTCATCGTCATGGGCGTCATGCTCTGGACGCCGGGGCTCATCTCCAAG
GGATGCTTCATCAACCTCGAGGAAGGCCACAACGTTGTCCGCTGCCGCACCGACGAGGCGCTCCACCGCGCAAAGTCCCT
CGTCAACCTGCAGTTCAGCTGGTACCTCACCGCCACCGTGCTGTTCGTCGTCGTGTTGTACCTCCAGCTCACCAAGCTGT
ACCACGAGGAGCCGCGCTACCTTCCGCTGGTGAAGACAAGCCACGCCGACGGCAGGTCCGGATC---------TGTCGAG
GACGATGACGGCGACGATGACGAC--------------------------------------------------------
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------------------------------------------------------------------------------
>SNPs
--SSSS---SS----S--SSSSS-S--SS-S-SSSSSSSSSSSSSS-SS-SS-SS--SSSS-SSSS-SS-SSSSSSSSSS
SSS-S-SSSSSS-SSSSS--SSSSSSSSS--SS--SS---SSSS-SSS-SSS--SSSSSSSSSSSSS--SSSSSS--SSS
SS--S-SSSSS--S-SS-S--S-SSSSS-SSSS-SSS--SSS-SSS-SSSSSSS--SSSSS-S-SSSSS-SSS-S-SSS-
SSS-S-SSS--SSS-SS-SSS-SSSS-SSSSSSSSSS--SS-S-SS--SS-----SSSSS-SSSS-S--S-SSSS--SSS
S-SSSSSSS-SSS-SSS-SS-S-SS--S-SSSSS-SSSSS-SS--SSSSSS-S-S-SSS-SS-SS-SSSS-SSSSSSSSS
S-SSSSS--SSS-SSSSSSS--SSS-SSSSSS-SSSSSSSSSSSSSSS-S-S-SSSSS--SSSS--SS-SS--SSSSSSS
S-SSSS-SSSS-SSSSSSS-S--SS---SSS-S-S---------------------------------------------
---------------------------------------------------------------------------S--S-
---S---S-----------S-S---SS-S-SSSSSSS-------------------------------------------
-------------------------------SSS---------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SSSSSSS---SSSSSSSSSSSSSSSS---S--------------------------------
S---S---------------------------------S-----------------------------------------
---------------------------------SSS-------------------S------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S---------------------SS--------S--------------------------
-------------------------S----S------------------------------------S-----S-----S
-SSS---------------SSSSSSS--------S----------------------------------SSSSSSS----
--------S-----------------------------------------------S-----------------------
---------------------------------------S----------------------------------S----S
--------------S-S-S-S---------------------------S-------------------SSSS-S------
-------------------------------------------------S-------------S--------S----S--
---S----------------------------------------------------------------------------
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-S------S-----------------------------------------------------------------------
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-----------------------------------------------S---SSS------------S------S------
------S---------S----------S-SSS----------S------------------------S-----S------
--SS-------SS--------------------------S-----S-----------S-S-S------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-S-
------------SS--------------S-SSSS---------------------------------------------S
--S-SS-S---------S----S-S-----S---S----------S-----S----S-----------------------
S--S--SS----S----------------------------S-----S--S--------------S----S--SSS-SSS
SSSSSSSSSSSSSSS----SS---SSSS--SS---------S-----S---SSSSSSS-----S-----------S----
S-SS-SSSSSSS-S--SSSSSSSS-------S------------------------S---SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_243
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---------------------------------------------------------------ACATCCCTGCCATTGAG
ACG-----------------------------------------------------------------------------
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>reverse_2364
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-------------------------------------------ATTACGGGCAGATGGTCAGC-----------------
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>forward_307
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-----------------------------------------------AGTGCAAGTGCCCTACCAAA-------------
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>reverse_2505
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------------------------AATCAGTAGGGTTGGGGTGC------------------------------------
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>forward_2468
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------------------------------------------------GGAGGGAACGGTCAAGATGG------------
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>reverse_8972
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-----------CATTGTTGGCACGGGTCAAG-----------------------------------------------
