>input_sequence_55760
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----------------------------------------ATGCTCGTCCCATGTACTACGGCTGTACCCACCCACACCT
CCAATCCAACCACCGGCCAGCAGGAGCAAGCCATGGCGGAGCAGCAGGTCGTGGACGCCATGAAGGACCAGGCCGCCCTC
TCGATGCGTCTCCTCCGTGGCCTCGGCCTCCGCGGCGAGCAAAACCTCGCCTTCTCGCCCGCGTCTTTCCACGCCACCCT
CTCCCTCCTCGCGGCTGGTACCGCCGGTGCCATTCGGGACCAGATCGTCTCCTTCCTGGGCCCCGCCGGCGCTGAAGCGC
ATGCTGCCCTCGTGTCCCACTTTGGCCAAACACCGAGCCACCAGGAAGAGGACGAGGAAGGATATCCCATGGTCCGGTGC
GCCACGGGGGTGTGGGTCGACTCCTCACTCCGCCTCAAGCCCACCTTCGCGACCATGGCGGCATCCAGGTTCAACGCGGA
GGCGCGAGCCGTCTGCTTTGGGTCAAGCCCCGAGCAGGCCAGGTCCGAGATCAACGAGTGGTTCGAGGGCGAGACAGGCG
GCCGGTGGAAGGAGCTTGTACCTGAGGGTTCCATCAACGCCGCCACGGTCATCGTCCTCGCCAACGCGCTCTATTTCAAA
GG---CTGGTACGACCCCTTCGACCCTGAGCTCACACAAGATGGCGACTTCTACGTCTCGCCCGGGCACGCCGTTCGCAC
GCCCTTCATGGTGGGGGGCTACCTGCACGAGAACATGTGCATCGCCTGCCACCCCGGCTTCAAAGTCCTGCGGATGCCCT
ACTGCGGCCACTACCAGGACTGTCGCTCCTCCATGTGCATCTACCTTCCGGACGATCGCGGCGGCCTGCCGGAGTTGGTG
CGCGCGCTCAGCTCTGACCCGTCCGTGCTATTCGCCGTACCGGAGAAACTGGTGTCCACGGGCGAGCTGAGGATCCCCAA
GTTCGACGTGTCGGTACGTCTCGAGGCCACGCAGATCCTCCGTGATCTCGGGCTGGACCTGCCGTTCCGTCTCACTCCGG
CCGGTGAATCCTTCTCGGAGATGCTGGCCTTGGACGAGCACGATTCCAAGATGCCGATGGCGGTGTCGTCCGTCGTCCAC
CAGTGCTCTGTCAACATCAACGAGCACGGTACCGTGGCCGCCGCAGCCACCGAGATGGAGATTCTGGGGTTTTGCCTGCC
GGAGGAGAAGGTCGTAGACTTCGTGGCCGATCACCCGTTCCTTTTTTTCATCATCAAAGAGGAGGACAACAATGGCGTGA
TTCTTTTCGCCGGCCAAGTAGTCAATCCTCTCTCTTAG------------------------------------------
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>chr2B_1_TraesCS2B01G325800
CCATACTTGCCTGCCGCGAACCAGAAACCGAGCGCACGATCACCATGTTCCAGTTGTCGCCGATGCAGACCACAATCTGC
ATCAGCTCCTGGACTACTTCCCAAGCTCCACCCCAGGCTGGAGCAAACATCGTCGCAACGTCGGAACCCGAGGACACAGG
TCCACCACGAGGATGCCGCCGCCGCTGCACCATCCTTACTTGAACATGCTGCTTTCCAAATCCACCCCAAAAGTGGATCG
CCTCGTTGGGGAAGGATCTGAAGATTTATTAGTCGGCGCCGCCTTCGCCATCACCGAAGCCAAGACAATGAACAACCCAA
AACCCTATGAAACTAATGCCTAAAATAATCCACACGTGTGGAGCCTGCGACCCCCCTCACCACCGACGACCGAGGACGTC
AGCGGGGAGCCGCCAGAGAACAGCGACGAAGGAAGGCGCCCAGACGGCTGGAGGTGAGATCACCTTTCTTTCTTCTCCTG
CAAGAAAGCGATCAATATGGATGTACCCCCTCCGTTCGGAATTACTTGTCACAAAAATGGATAAAAATGAATGTATCTAC
AACTAAAATACATATTCCTTTTTTTCATGGTAATACGTGTCTCATTCATATCATAAAGAACAAAGTACAAGTCACGTAAA
GACCGAAATGACAAAACTGAAAAGACAACAGAACATCTCTGAGCTTGACACCAACGCCCGTCACCTGCCTCCGGCACCAC
CACAGCAGCCACCGAAGAAAAGAATGACGAATCACCTCCTCACCCGAGCTCGACGCGGCTCCATTCGGAATTACTCGTCC
AAAAAATGAATATATCTAGATATATTTTAGTTGTAGATACATTCATTTTTGTGACAAGTAATTCCAAACTGAGGGAGTAC
TAAACATGTCAACATTAAACGTGTCTAGATTCATCGTTTTTTAGACAAATGTAACACAATTAATTCGGGACGCGGAGAAT
ATTTTTTAATGGCATCCCCGTGTCTCGTGTATTAAAGGCTATGCTCGTCCCATGTACTACGGCTGTACCCACCCACACCT
CCAATCCAACCACCGGCCAGCAGGAGCAAGCCATGGCGGAGCAGCAGGTCGTGGACGCCATGAAGGACCAGGCCGCCCTC
TCGATGCGTCTCCTCCGTGGCCTCGGCCTCCGCGGCGAGCAAAACCTCGCCTTCTCGCCCGCGTCTTTCCACGCCACCCT
CTCCCTCCTCGCGGCTGGTACCGCCGGTGCCATTCGGGACCAGATCGTCTCCTTCCTGGGCCCCGCCGGCGCTGAAGCGC
ATGCTGCCCTCGTGTCCCACTTTGGCCAAACACCGAGCCACCAGGAAGAGGACGAGGAAGGATATCCCATGGTCCGGTGC
GCCACGGGGGTGTGGGTCGACTCCTCACTCCGCCTCAAGCCCACCTTCGCGACCATGGCGGCATCCAGGTTCAACGCGGA
GGCGCGAGCCGTCTGCTTTGGGTCAAGCCCCGAGCAGGCCAGGTCCGAGATCAACGAGTGGTTCGAGGGCGAGACAGGCG
GCCGGTGGAAGGAGCTTGTACCTGAGGGTTCCATCAACGCCGCCACGGTCATCGTCCTCGCCAACGCGCTCTATTTCAAA
GG---CTGGTACGACCCCTTCGACCCTGAGCTCACACAAGATGGCGACTTCTACGTCTCGCCCGGGCACGCCGTTCGCAC
GCCCTTCATGGTGGGGGGCTACCTGCACGAGAACATGTGCATCGCCTGCCACCCCGGCTTCAAAGTCCTGCGGATGCCCT
ACTGCGGCCACTACCAGGACTGTCGCTCCTCCATGTGCATCTACCTTCCGGACGATCGCGGCGGCCTGCCGGAGTTGGTG
CGCGCGCTCAGCTCTGACCCGTCCGTGCTATTCGCCGTACCGGAGAAACTGGTGTCCACGGGCGAGCTGAGGATCCCCAA
GTTCGACGTGTCGGTACGTCTCGAGGCCACGCAGATCCTCCGTGATCTCGGGCTGGACCTGCCGTTCCGTCTCACTCCGG
CCGGTGAATCCTTCTCGGAGATGCTGGCCTTGGACGAGCACGATTCCAAGATGCCGATGGCGGTGTCGTCCGTCGTCCAC
CAGTGCTCTGTCAACATCAACGAGCACGGTACCGTGGCCGCCGCAGCCACCGAGATGGAGATTCTGGGGTTTTGCCTGCC
GGAGGAGAAGGTCGTAGACTTCGTGGCCGATCACCCGTTCCTTTTTTTCATCATCAAAGAGGAGGACAACAATGGCGTGA
TTCTTTTCGCCGGCCAAGTAGTCAATCCTCTCTCTTAGAGCAATTAATATGATGAATTTGTTGCAATAAGTATTGTGAGG
CGTTACTCGTTATGAATCTTTGTACTAGTACTTCAATCCAAAATCGACTGTTTAGTGTCACTGTCAGCCCATGCACGGGC
TTGTGATATTTTCCTTCATTTTCTTGTTTACCTTATAGTACATCATTCTTCATTTCAATCCCGACTATGAAAAACATAAG
TACGATCATTTTGATCTAGCCAGCTAATACTCCTAGTTTAAAGCTGCGACACTTATTATAAATCGGAGGAAGTATTTTTT
TTTTAATCTAATTTGACAACAGTCTAGATTGCGGACAAATGTTACTGGATCTCCTAATCGTAGTTATTCTCTCTTAAGTA
CTTACTATTTTTATTTTGTAATATGCGACATATACAGGTCTATGGTCTTAATTTTGTTTAGTTTTATTTTTTATGAAATT
TGTGTTCTTGGTGATGTGCATTCAACCACAAATTTTAGGAGAGTAACCAAAAGTTGAGTAGTGCAAAAATCTACAAATTG
ACGATCAACATTCGAGAGCTTGTAAAGGAAGTGTCCCAATTTAATAGGCGAGCAATAGAGTTGCACATATGCACTCCATA
AATTGATGATCAACATTGGAGAGCTTGTGAAAGAGTGGGCTTTGGCGCTGGTCTCAGCCGTTCTCCCAGTCCAGATTCAA
TTGAGTCCAGGAGTTTGTCTCACTCGCCAGCTCAGAGCAAGGGCAAGGCTGTGGTGGTTGAAGAGGGAGAGGGCTCCAGC
AGGCCTAGCTCTTCCCCGCACGGCTGGCGCTTGCTTCTATCGCGGTTGCTCCTAGTTTGGTGTCCAGTGGCACAGCTCTT
GATGCTGATAGTGACTTAGTGAGGGCCCGGAGTGGCAGATGGTGAGGAATCATCGTCGTCGTAGATCAGCTAGTCTTGCC
TTGAAGAAACGGGGCTCGGAAGGTGCACGGCGGCCTGTTACAGCAAACCTTCATGGATTGTGCTTCAATTTCTTGAAC
>chr2D_1062
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---------------------AGGAGCAAGCCATGGAGGAGCAGCAGGTCGTGGACGCCATGAAGGACCAGGCCGCCCTC
TCGATGCGCCTCCTCCGTGGCCTCGGCCTCCGCGGCGAGCAAAACCTCGCCTTCTCGCCGGCGTCTTTCCACGCCATCCT
GTCCCTCCTCGCGGCTGGTACCACCGGTGCCATTCGGGACCAGATCGTCTCCTTCCTGGGCCCCGCCGGCGCTGAAGCGC
ATGCTGCCCTCGTGTCCCACTTTGGCCAAACACCGAGCCACCAGGAAGAGGACGAGGAAGGACATCCCATGGTCCGGTGC
GCCACTGGGGTGTGGGTCGACTCCTCTCTCCACCTCAAGCCCACCTTCGCGACCATGGCGGCATCCAGGTTCAACGCGGA
GGCGCGAGCCGTCTGCTTTGGGTCAAACCCCGAGCAGGCCAGGTCCGAGATCAACGAGTGGTTCGAGGGCGAGACAGGCG
GCCGGTGGAAGGAGCTTGTACCTGAGGGTTCCATCAACGCCGCCACGGTCGTCGTCCTCGCCAACGCGCTCTATTTCAGA
GGCTACTGGTACGACCCCTTCGACCCTGAGCTCACACAAGACGGCGACTTCTACGTCTCGCCCGGGCACGCCGTTCGCAC
GCCCTTCATGGTGGGGGGCTACCTGCACGAGAACATGTGCATCGCCTGCCACCCCGGCTTCAAAGTCCTGTGGATGCCCT
ACTGCGGCCACTACCAGGACTGTCGCTCCTCCATGTGCATCTACCTTCCTGACGATCGCGGCGGGCTGCCGGAGTTGGTG
CGCGCGCTCAGCTCTGACCCATCCGTGCTATTCGCCGTGCCGGAGAAACTGGTCCCCACGGCCGAGCTGAGGATCCCCAA
GTTCGACGTGTCGCAACGGCTCGAGGCCTCGCACCTCCTCCGTGATCTCGGGCTGGACCTGCCGTTCCGTCTCAATCCAG
CCGGTCAGTCCTTCTCGGAGATGCTGGCCTTGGACGAGCACGATTCCAAGATGCCGATGGCGGTGTCGTCCGTCGTCCAC
CAGTGCTCTGTCAACATCAACGAGCAAGGTACCGTGGCCGCCGCAGCCACCGACATGGAGATTCTGGGGTGTTGCCTGCC
ATCGGAGAAGGTCGTAGACTTCGTCGCCGATCACCCATTCCTTTTTTTCATCATCAAAGAGGAGGACAACAATGGCGTAA
TTCTTTTCGCCGGCCAAGTTGTCAATCCTCTCTCTTAGAGCAATTAATATTATGAATTTGTTGCAACAAGTATTGCGAGG
CGTTACTCGCTATGAATCTTTGTA---GTACTTCAATCCAAAATTGACTGTTTAGTGTCACTGTCAGCCCATACACGGGC
TTGTGATATTTTCCTTCGTTTTGTTGT-----------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS---------------S-------------------------------------------
--------S--------------------------------------------------S----------------S---
S---------------------S---------------------------------------------------------
--------------------------------------------------------------S-----------------
-----S--------------------S----S------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------S---------------------------S-
-----------------------------------------S--------------------------------------
----------------------------------------------------------------------S---------
-------------------------------------------------S--------------S---------------
--------------------S-----------------S--------------SS------S------------------
-------------SS---S---------S----SS---------------------------------------S---S-
-----S-S------------------------------------------------------------------------
--------------------------S--------------------------S----------------S---------
SSS---------------------S-----------S-----------------------------------------S-
-------------------S------------------------------S---------------S--------S----
---------S--------------SSS-----------------S---------------------------S-------
-----------------S----S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_64
--------------------------------------------ATGTTCCAGTTGTCGCCGAT----------------
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>reverse_1003
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------------------------------------------GCTCGTCCCATGTACTACGG------------------
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>forward_436
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----------------AGAACAGCGACGAAGGAAGG--------------------------------------------
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>reverse_2239
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------------------------------------------------------------------------------GA
TTCTTTTCGCCGGCCAAG--------------------------------------------------------------
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>forward_1022
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------------------------------------------GCTCGTCCCATGTACTACGG------------------
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>reverse_2970
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---------GGAGTTTGTCTCACTCGCCA---------------------------------------------------
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