>input_sequence_55750
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------------------------------------------------------------ATGGCCAGGCGGGACGACGA
CTCCGCTTACACGAATGGATCGGTGTCGGTGAACGATTTCTCCGTGGAGGATGGGAGGAAGGAGAAGGATGTGTCTGCTG
ATTACCACCCTGACCAGGACATGGTCTGTGGCTTCCCCGTCTCTGTTTCTTTTCTTCAGATGGTGAGCCTACTATATCTA
TCTCGGTTGATTCCTATACCTCTCTCGATGGATGTACGTATATGATTGTGTATATTCTGTTTACATCCAAGATCCAACCA
CTGTTTGACTACGCTGGCTTGTGCATGTAGCTCCTCGCCGAGTTATTCTCCACATTCTTCTTGCTGTTCGCCGGCATGGG
CGCCATCGTGGTGAACGAGGAGAAGCAGGGCGCGGTCACGTTCCCGGGCATCACCGTGGTGTGGGGGATGGCCGTCATGG
TCATGGTCTACACCGTCGGCCACATCTCCGGCGCCCACATGAACCCCGCCGTCACGGTCGGCTTCGCCATCGCCCACCGG
TTCCCCTGGAAGCGGGTAAGCGCCACCACCAGATTCGCCCCCTGAGGAGAGTGAACGACCTGCAGATGACATATGTGAAT
ATGTGCGCGCAGGTGCCGGCTTACATGGTGGTGCAGATGGTGGCCGCGCTGATCGCGAGCTTTCTGCTGCGGCTGCTGTT
CGGCGAGAAGCACGAGTTCGCGCCGGTGACGCTGCCCACGGGCTCCAACCTCCAGTCGCTCGTGGTGGAGTTCATCACCA
CTTTCTACCTCGTCTTCGTCATCATGGCCGTGGCTACAGACGACCGAGCGGTAAGCT-AGCTAGGCCGCCATGCATGCAT
GCATGCACCGACGAGAGACATGCACGTGCATGCATACCTGCGCCCTACGTACTTACCATCCATTTCTCGTTTTTGTGCAG
TCGGGGCAGATGGCTGGGCTGGCTGTGGGCGCAACCATCATGCTTAACGCGCTATTCTCTGGGTACGTACGCCTTGCTGC
AC---------TGTTGCTTAACTTTGCGGCATGATCATTGATCTGCCGCTTCATTGATGTTTACGCATGCATATTTACCT
ACGTACGTGCGTGCGTTTGGTCGACCATGACAGGCCGGTGACGGGAGCATCGATGAACCCGGCGAGGAGCATCGGGCCAG
CGCTGGTGTCGGGCAAGTTCAAGTCGCTCTGGGTGTACGTCCTCGGGCCGTTCGCCGGCGGGGCGGCCGGAGCTTGGGCT
TACGGTCTCGTCCGCCACACCAGCAAGCCGCTGCGCGAGATCACCAAGAGCACCGGCCGGGCTTAA--------------
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>chr7A_1_TraesCS7A01G355000
AGTATCGTCCACATATCGTGCATGAATTATCGTCCATATAGCACTGCTCTTTCTGCCACATAGGCTGGTCATGCCATTCA
TCTTGCCAAAGAAGAGTTTATTTCCCGACAAACACAAGGCGATTGTTTGTGCCGTCCAAGATCAGCTTTCTAGGGGATGG
CATTGATGTAGAGCTCCCGGGCTGAGTAATCAGAAATTTTCATGATTTTGTGTAAGATCAAAGTTGATGTCAGTGATGTT
AATTCAATTTGATGATGTGAGGTCCTTATGGTCGGTACCAACCCTAGCATAATTTTCTCACCATTTGGCCCTTCTATCTC
CTCACCATGGTCATATGGACGTCGATCGCCCTGTTGCAGCATCGTCCTTAAATGTTGGTACTCACGAGTTTACGCACAAG
TGCATACAAATTTTCGCCTGGCATTCTGCAGTTCTACCCTGTAATTTAGAAGCACACTCGATCCAAGTAGACGTGCGTTG
GCGTGTACGTCATGCTTGTAATTTGAAATGTTTGGCGCAAGTGGTAATGCTGAGGCACTACGCGCGTCCCCACCAACTAT
CGCGTACACCTG-----CTAAGTGCATAGTTTTGTCTTGTCCGATAGGTCCTTGGAGTTCTCGCTTGCCATTAATCTGTC
CAATGCAGTAGCAAATTATCTAGTATCACCTTCCGCCCTCGATGTCTGG---CGTGAATCTTCCATAATTCCCCTACTCT
TCTTT-----AATACCTATAGTGGCAACGGAACTCTTCTTTAGTATTACCGGTCTCGACAAATCCGAGGGTTGAAGGAGA
AGAGACAGAACATGGTGGAGCTAGCAAAAGAAGTCGATGGTTATAGAACATGGTGGAGTATACCACATGACAAGC-TGTC
CTTGCTGGTGTATATATAGTTCAGTCGACTTGCTCAGTTCTCACTACCCTCACCTGTCATCTCAGTGCTTCCAC------
ATTCTAGTCACCCTAGCTAGTTTTGTCACTTGGAGTGTGTATCAGTAGATCGAGGCAGAAATGGCCAGGCGGGACGACGA
CTCCGCTTACACGAATGGATCGGTGTCGGTGAACGATTTCTCCGTGGAGGATGGGAGGAAGGAGAAGGATGTGTCTGCTG
ATTACCACCCTGACCAGGACATGGTCTGTGGCTTCCCCGTCTCTGTTTCTTTTCTTCAGATGGTGAGCCTACTATATCTA
TCTCGGTTGATTCCTATACCTCTCTCGATGGATGTACGTATATGATTGTGTATATTCTGTTTACATCCAAGATCCAACCA
CTGTTTGACTACGCTGGCTTGTGCATGTAGCTCCTCGCCGAGTTATTCTCCACATTCTTCTTGCTGTTCGCCGGCATGGG
CGCCATCGTGGTGAACGAGGAGAAGCAGGGCGCGGTCACGTTCCCGGGCATCACCGTGGTGTGGGGGATGGCCGTCATGG
TCATGGTCTACACCGTCGGCCACATCTCCGGCGCCCACATGAACCCCGCCGTCACGGTCGGCTTCGCCATCGCCCACCGG
TTCCCCTGGAAGCGGGTAAGCGCCACCACCAGATTCGCCCCCTGAGGAGAGTGAACGACCTGCAGATGACATATGTGAAT
ATGTGCGCGCAGGTGCCGGCTTACATGGTGGTGCAGATGGTGGCCGCGCTGATCGCGAGCTTTCTGCTGCGGCTGCTGTT
CGGCGAGAAGCACGAGTTCGCGCCGGTGACGCTGCCCACGGGCTCCAACCTCCAGTCGCTCGTGGTGGAGTTCATCACCA
CTTTCTACCTCGTCTTCGTCATCATGGCCGTGGCTACAGACGACCGAGCGGTAAGCT-AGCTAGGCCGCCATGCATGCAT
GCATGCACCGACGAGAGACATGCACGTGCATGCATACCTGCGCCCTACGTACTTACCATCCATTTCTCGTTTTTGTGCAG
TCGGGGCAGATGGCTGGGCTGGCTGTGGGCGCAACCATCATGCTTAACGCGCTATTCTCTGGGTACGTACGCCTTGCTGC
AC---------TGTTGCTTAACTTTGCGGCATGATCATTGATCTGCCGCTTCATTGATGTTTACGCATGCATATTTACCT
ACGTACGTGCGTGCGTTTGGTCGACCATGACAGGCCGGTGACGGGAGCATCGATGAACCCGGCGAGGAGCATCGGGCCAG
CGCTGGTGTCGGGCAAGTTCAAGTCGCTCTGGGTGTACGTCCTCGGGCCGTTCGCCGGCGGGGCGGCCGGAGCTTGGGCT
TACGGTCTCGTCCGCCACACCAGCAAGCCGCTGCGCGAGATCACCAAGAGCACCGGCCGGGCTTAATAAATGAACTCGTA
CTAAATTAAGAACCGTGCG----GTATACATGTTCGGACCGATCGACACGCCCAAGAGAGGACCAATAATTGGAGCTAC-
------GAGTGTATGGTGTGGTTACTGTCTGAAAAACGATGCATTCCTAGCTAGTCTAGCATAGCGTGTATCGATCTATT
TACAGAGGACGACGGATATACGAGCGAATAAATAGGCATGTGCTTTTACTTGTTGCCTGGTTGGTATGTATGTGTAGTGA
TTATTGGCGAGGCGATAATCGATATGTGTGTATCTTACTTTCATATATGTGCACGTCCTTTTTCTTTTTATTGTTGGCTT
TAAGATCTTTGCCGATTCAATAACTAGAACAGAGATTTGTAACCCATCTAAAAAACAGTTTGCTACAAGAGGTAAAAGCA
GTCGAACAGAGTTGACTTTCTTTCCGGGCGCCTTTTACACAAATGTAATATCGCATCAAGAGAATATAAGCATTACGAGC
ACATATTCAGCTCTACATGCATTAAAATTACACAAATGCACACACACAAAGAACGCGGATAAAACAATGAATGTCCGATC
AAGCCAATTCAAACATGCAGCATGAACCATCAACATCAATAACCCCCTATGATAGCATCCAGACAGAAAAAATTGCTTTA
ACAATGACGCCTCCAAAAAAGAAATGGCACACAAGTGTTGCCATCATGGATCAATCCATGGAGGCATGATCTTTGGTTTC
ACCTCAAAGAGGACGTCCAAGCAAATTTCTAGACAATGCCTCCAGCAAAGGATGATGTGGTCACTACCATTGCGAAGTAC
AACCAATGAAGACCAGGCCTAGACTTTTCACTCCGGAGCTCGAGACTATGTACTCAAGAGCACCATCAAATTTTAAGGGA
GCCGCTAGAAATTAGACGTCTGATTTTTAGCATCCCATCAAACTAGTCATGCATCGTACGGTTTGTTTGATCTCATACGT
TCCAGAAAAGGGGGTCGGGCTCTCCTACTGGGTTCCC
>chr7D_426
CTGCCA--------------------------------------------------------------------------
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------------------------------GTTCTACCCTGTAATTTAGAAGCACACTCGATCCGAGTAGATGTGCGTTG
GCGTGTACGTCATGCTTGTAATTTGAAATGCT---------TGGTAATGTTGAGGCAGTACGCGCGTCCCCGTCAACCAT
CGCGTAAACCTAAGGGCCTAAGTGCACGCTTTTGTCTTGTTTGGTGAGTCCTTGGAGTTCTCGCTTGCTGTTAATCTGTC
CAATGCAGCACCAAATTATCTA---TCGCCTTCCGCCCTCGATGTCCGG---GGTGAATCTACCACAAATTTTCTAGTTG
GTTTGAACTAAACACCTAGAGTAGCAACGGAACTCTTCTTTAATATTTCCAGTCTCGACAAATCCGAGGGTTGAAGGAGA
AGCGACATAACATGGTGGAGCTAGCAAAACAAGCCGGTGGTTATAATATG------------CCACATGACAAAGTTCTC
CTTGCTGGTGTATATATAGTTGAGTCGACTTGCTCAGTTCTCACTGCCCTCTCCTGTCATCCCAGTGCTTCCAC------
ATTCTGGTCACCCTAGCTAGTTTTGTCACTTGGAGTGTGTACCAGCAGATCGAGGCAGAAATGGCCAGGCGGGACGACGA
CTCTGCTTACACGAATGGATCGGTGTCGGTGAACGATTTCTCCGTGGAGGACGGGAGGAAGGAGAAGGAGGTGTCTGCTG
ATTACCACCTGGACCAGGACATGGTCTGTGGCTTCCCCGTGTCTGTTTCTTTTCTTCAGATGGTGAGCCTACT-------
--------------------TCTCTCGATGGATGTACGTATATGCTTGTGTACATTCTGTTTTC-------ATCCAACCT
CTGTTTGGCTACGCTGGCATGTGCATGTAGCTCCTCGCCGAGCTGTTCTCCACATTCTTCTTGCTGTTCGCCGGCATGGG
CGCCATCGTCGTGAACGGGGAGAAGCAGGGCGCGGTCACGTTCCCGGGCATCACCGTGGTGTGGGGGATGGCCGTCATGG
TCATGGTCTACACCGTCGGCCACATCTCCGGTGCGCACATGAACCCCGCCGTCACCGTCGGCTTCGCCATCGCCTGCCGG
TTCCCCTGGAGGCGGGTAAGCGTCGCCGCCAGATTCGCCCCGTGACGGGAGTGAGCAACCTGCAGATGACATGTGTGCAT
ATGCGCATGCAGGTGCCGGCGTACATGGCGGTGCAGATGGTGGCCGCGATGATCGCGAGCTTTCTGCTGCGGCTGATGTT
CCACGGGAAGCACGAGTTCGCGCCGGTGACGCAGCCCACGGGCTCCAACCTCCAGTCGCTGGTGATGGAGTTCATCACCA
CTTTCTACCTCGTCTTCGTCATCATGGCCGTGGCTACAGACGACCGAGCGGTAAGCT-AGCTAGGCGGC----CATGCAT
GCATGCACCGACGAGAGACATGCACGTCCATGCATACCTGCGCCCTACGTACTTACCATCCATTTCTCGTATTTGTGCAG
TCGGGGCAGATGGCTGGGCTGGCTGTGGGCGCGACCATCATGCTTAACGCGCTATTCTCTGGGTACGTACGC-----TCT
CCTACGCTGTTTGTTGTTTAACTTTACTGCATGATCATTGAT--------------------------------------
--GTACGTACGCACGTTTGGTCGACGATGACAGGCCGGTGACGGGAGCATCGATGAATCCGGCGAGGAGCATCGGGCCAG
CGCTGGTGGCGGGCAAGTTCAAGTCACTCTGGGTGTACATCCTCGGGCCGTTCGCCGGCGGGGCGGCCGGAGCTTGGGCT
TACGGCCTCGTCCGCCACACCGGCAAGCCACTGCGCGAGATCACCAAGAGCGCCGACCGGGCTTAATGAATGAACTCGTA
GTAAATTAAGAACCGTGCG----GTACACATGTTCGGACCGGTCGACACGCCCAAGAGAGGAGCAATAATTGGAGCTACT
ACGCATGAGTGTATGGTGTGATTACTATCTC--AAACGATGCATTCCTAACTAGTCTAGCATAGCGTGTATCGATCTACT
TACAGAGGACGGAGGATATATGAACGAATAAATATCCATGTGCTTTTACTTGTTGCCTGGTTGGTATATACGTGTAGTGA
TTATTGGCGAGGCGATAATTGATATGTGTGTATCTTACTCTC--ATATGTGCACGTCCATTTTCTTT--ATTGTTGGTTT
TAAGATCTTTGCTGATTCATTAAGTAGAACAGAGTTTAGTTACCCATCTAAAAAACAGTTTGATACATGAGGCAAAAGCA
GTCGAACA------------------------------------------------------------------------
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>chr7B_431
GTTTA---------------------------------------------------------------------------
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------------------------------------CCCTGTAACTTAGAAGCACACTCAATCCGAGTAGATGTACGTTG
GCCTGTACGTCATGCTTGTAATTTGAAATGTTTGGCACGAGTGGTAATGCTGAGGCATTACGCGCGTCCCCGTCAACTAT
CGCGTAAACCTAAGGGCTG-AGTGCATGCTTTTGTCTTGTCTGGTGTGTCCTTGGGGTTCTCGCTTGCTGTTAATCTGTC
CAATGCAGCACCAAATTATCTA---TCACCTTCCGGCCTCGATGTCTGGGGTGGTGAATCTTCTGCAAATTTTCTAGTTG
GTTTGAACTAAACACCTAGAGTAGCAACGGAACTCTTCTTTAATATTTCCAGTCTCGACAAATCCGAGGGATGAAGGAGA
AGCGACATAACATGGTGGAGCTAGCAAAACAAGCCGATGGTTATAATATG----------TACCACATGACAAGC-TCTC
CTTGCTGGTGTATATATAGTTCAGTCGACTTGCTCAGAGCTCGGTACCCTCTTCTGTCATCTCAGTGTTTCCACTTCCAC
ATTCTGGTCGCC----CTAGTTTTGTCACTTGGAGTGTGTACCAGGAGATCGAGGCAAAAATGGCCAGGCGGGACGACGA
CTCTGCTTACACGAATGGATCGGTGTCGGTGAACGATTTCTCCGTGGAGGACGGGAGGAAGGAGAAGGAGGTGTCTGCTG
ATTACCACCTTGACCAGGACATGGTCTGTGGCTTCCCCGTCTCTGTTTCTTTTCTTCAGATGGTGAGCCTACT-------
--------------------TCTCTTGATGGATGTACGTATATGCTTGTGTACATTCTGTTTTC-------ATCCAACCT
CTGTTTGGCTACGCTGGCATGTACATGTAGCTCCTCGCCGAGTTATTCTCCACATTCTTCTTGCTGTTCGCCGGCATGGG
CGCCATCGTCGTGAACGGGGAGAAGCAGGGCGCGGTCACGTTCCCGGGCATCACCGTGGTGTGGGGGATGGCCGTCATGG
TCATGGTCTACACCGTCGGCCACATCTCCGGCGCGCACATGAACCCCGCCGTCACCGTCGGCTTCGCCATCGCTCGCCGG
TTCCCCTGGAGGCGGGTAAGCGTCGCCGCCAGACTCGCCCCGTGACGAGAGTTAGCAACCAGCAGATGACATGTGTGCAT
ATGCGCATGCAGGTGCCGGCGTACATGGCGGTGCAGATGGTGGCCGCGATGATCGCGAGCTTTCTGCTGCGGCTGATGTT
CGGCGGGAAGCACGAGTTCGCGCCGGTGACGCTGCCCACGGGCTCCAACCTCCAGTCGCTGGTGATGGAGTTCATCACCA
CTTTCTACCTCGTCTTCGTCATCATGGCCGTGGCTACAGACGACCGAGCAGTAAGCTAAGCTAGGCGGC----CATGCAT
GCATGCACCGACGAGAGACTGCGCCGTACGTACT---------CCTACGTACTTACCATCCATTTCTCGTATTTGTGCAG
TCAGGGCAGATGGCTGGGCTGGCTGTGGGCGCGACCATCATGCTTAACGCGCTATTCTCTGGGTACGTTCGCTTCCCTCT
CCTACGCTGTTTGTTGTTTAACTTTACGGCATGATCTTTAAT--------------------------------------
--GTACGTACGCACGTTTGGTCAACGATGACAGGCCGGTGACGGGAGCATCGATGAACCCGGCGAGGAGCATCGGGCCAG
CGCTGGTGGCGGGCAAGTTCAAGTCGCTCTGGGTGTACATCCTCGGGCCGTTCGCCGGCGGGGCGGCCGGAGCTTGGGCT
TACGGCCTCGTCCGCCACACCGGCAAGCCACTGCGCGAGATCACCAAGAGCGCCGACCGGGCTTG----ATGAACTCCTA
GTAAATTAAGAACCGTGCGCGCGGTACACATGTTCGGAGCGATCGACACGCCCAAGAGAGGAGCAATAATTGGAGCTAT-
--GCATGAGTGTATGGTGTGATTACTATCTT--AAACGATGCATTCCTAGCTAGTCTAGCATAGCGTGTATCGATCTACT
TACAGAGGACGGAGGATATACGAACGAATAAATATCCATGTGCTTTTACTTGTTGCCTGGTTGGTATATACGTGAAGTGA
TTATTGGCGAGGCGATAATCGATATGTGCGTATCTTACTGTC--ATATGTGCACGTCCAATTTTTTATTTTTTATTTTTG
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------S------S--------
------------------------------------S-S------------------S-------------SS-------
------S----S---------------SS------------S-S-SS---------------------SS----------
--------S-S-----------SSS---------------------------S------------S--S-SSS---S-SS
SS--S-------S-----S---S-------------------S----S--S-----------------------------
--S----S---------------------S---S-----------SS-SSSSSSSSSSSS-----------------S--
---------------------------------------------------S----------------------------
-----S-----------------------------------S---S----------------------------------
---S-----------------------------------------------S-----------------S----------
---------S---------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------S-------S---------S-SSSSSSS--------S
-------S----------S-------------------------------------------------------------
---------S-------S--------------------------------------------------------------
----------------------------------S--------------------S-------------------S----
----------S-----------S-S--S-------------S---S--------S-S---------------S----S--
---S--SS------------S-------S-------------------S--------------------------S----
-----S------------------------------------------------------S---S---------------
------------------------------------------------------------------S--SSSS-------
---------------------------S------------------------------------------S---------
--------------------------------S---------------------------------------S-SS--SS
S---------------S--------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS------S--SS------------S------------------------------------------------------
--------S-----------------------------S-----------------------------------------
-----S---------------S-------S---------------------S---S-----------S------------
S-------------------------S-----------------------------------S-----------------
--------------------S-----S---SSS---------------------------------------------S-
-----------SS----------S----------SS-------------------------------S--S---------
---------------------------------------S--SS--------------S------------------S--
------------S------S---S----------S--S--S---------------------S----S----S-------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_194
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--------------TCCCGGGCTGAGTAATCAGA----------------------------------------------
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>reverse_1593
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------------------------------------------------------------------------ATGTGAAT
ATGTGCGCGCAG--------------------------------------------------------------------
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>forward_429
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---------ATTTTCGCCTGGCATTCTGC---------------------------------------------------
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>reverse_2292
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---------------------------------------------------ACCGGCCGGGCTTAATAAAT---------
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>forward_1996
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--------------------------------------------------------CTCTGGGTACGTACGCCTTG----
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>reverse_3143
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----------------------ACTTTTCACTCCGGAGCTCG--------------------------------------
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