>input_sequence_55746
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATGGCCTTTGCCGCGCTCTTTGTTGACTCGCTCTACTGCCCGGAGGAGCAC
CACGACCTGTTCCAGGAGCCGGCCGAGGAGCAGTGGCCGGATCAGCAGCCGCTGG---TGGCTCTTGACGACGAGCTGCC
GGCGCTGTTCGAGGTGTTCAGGGGCAAGGAGGAGGTGCTGCTGCGGGAGGGCGGCGACGGGTACGGCGGCGACGCGAGGA
GGCAGGCGGCCGTGGGGTGGGCGACGCGCGCGGCGGCCAGGCTCGGCTTCTCCGCCCTCACGGCCGCGCTCGCCGCCGCG
TACCTCGACCGCTGCTTCCTCAGCGGCGGCGCGCTGCGGCTCGGGGACCAGCCGTGGATGGCGCGGCTCGCCGCCGTCGC
CTGCGTGGCGCTCGCCGCTAAGGTGGAGGAGACGCGGGTGCCCGTGCTCCTCGACCTCCAGCTCTGCGCCGCCGAGAGCG
CCGGCGACGCCGACGTGTTCGACGCCAAGACGGTGCGCCGGATGGAGCTCCTCGTGCTCTCCGCGCTCGCCTGGCGGATG
CACCCCGTCACGCCATTCTCCTTCCTCCACCCCGTGCTCGCCGCCGCGCGCCTGCGCCAGTGCGAGAGCGTCCTGCTCGC
GGTAATGCCAGGTGGGTTCATGGCTCTTCCCCGTCCATGCATTGCTGTCTCAAGAATAAAAGACTCCATCTTTACGTCAA
GCGTGTTCTCACTTTGCGCGCGTGGCAGACTGGAGCTGGCCACGGTACCGCCCGTCGGCGTGGGCTGCGGCGGCATTGCT
CGCGACGGCCGGCTACGGCAGTGGCGACGGCGACGCCGAGCTCTTGGCGCTCATCAACGCCCCCGAGGTCAGCACCACAA
ACTTGTCGTTAGCGGTTGCCACATTATTACTACCAGCTGTCTTCGTGCACACTCGTGCCAATGCCACTGTTTGTGCTCAA
CTGATGGGCTTGCCAATGCAGGACGAGGTGGCGGAGTGCGTCAAGATCCTCTCCGGGGAGGCGGCGGCGGGATTCATGGG
CTTCGGCGGCGACAATAAGCGCAAGCGCGCGGCAGCGGGGCTGCACTCGCCGCCGCTGAGCCCGAGCGGCGTGATCGGCG
CGGCGGCATACTTCAGCTGCGAGAGCTCGTCCAGCAGCGCGGACTCACGCTCCGGCGCCGCCACCGCCTGGCCGGGGTCA
GTCTCCGTGTCGTCCTCCCCGGAGCCCGCCGGCCGGCCGCTCAAGCGCGCCACCGCCACGGCGATGATGCTTCCACCCGA
CGAGGAGAGCCGCGACGCCTGGCGTTAG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G161000
GGATAGGATTGGGAGGAGGGCGTAAAAAACGAGAAATTTGTGAAGGACTCCTTGGAGGTGCGCTGGTGCTCTCCGGTGAG
AAAAACGAAGAGCGATGGAGGGTAGACGGGAAGGGCTATTTTGCCAAAAGAACAAAGATCAAAGTGAGTGTACGGCTCAA
ATACAGTGAATGAGGA-----------TTTTTTTT-ACGGGAAATGAGGGTATATATCTTTTTTTGCGGGTATATATCTT
TGGAGAGCATGTCATGCCGAAGGCAATTTGAAAACCTACGTATTTG--A--TAAAAAAATCTTGGAAAAAACGTCCTTTC
ACGGAGAATATGCCACTGCATTTGTGGAAATATGATTTTGGCAGGAGGGAAAGCTGGGTCGGCGGCAAGCGTCGGAGCGA
GGAGGCAAGGTCCATCCATCACAAGCGAGCAGAGGCAGGGTGAGA------AAAGACAGCACTGCTCGCCAGCAGCGGCT
CCCGTGTCCTTCCTTCCT-----GGGGAACCCCCGAAAGTTGAACGCCCGGGCGAGGGAAGCC-------------GCGA
AAACCAAAAGCAAACCAACT------CTCGCCTCCCCTCCCCCAATCCCTGTCTCCCT------------CTGCCCGCAG
GCCGCAGCAGCAGCAGCACGCACACCACCCCCGCAATAAAGAAGCTGCTGCCCC-TGCCGTTGCGTTGCGTCGCGTGGCG
GGTGGCGCTCCCCTCTCCCCCT----------CTCTCTCTCTCTTCGTCTTCCTCCCGAACCCCAATAAAACCTCCCCGC
CCTTTCCCTCCTATCCCATTTGTGCTGCGTGCTGCGCTCATCACTGCCCCCCACCACGCCTCCCACTGCTCGAGGCCAGC
TAAAGCAGCCAGCCAACCAGCCGTAGCCGCAGTTAAAGCCAACCGGCTACCTCGCCCCGCCTCGCCTCGCCATGGGAGGG
GAGCCGCTCTCCTCTTCCGCTCCCGCCGCGCCCTGAGCAGGACCGAGCACCACTGGACTTGTCCCCCGTTACGTCACTGT
ATCTGTACCCACGGGAGCACGTTGTGGCCATGGCCTTTGCCGCGCTCTTTGTTGACTCGCTCTACTGCCCGGAGGAGCAC
CACGACCTGTTCCAGGAGCCGGCCGAGGAGCAGTGGCCGGATCAGCAGCCGCTGG---TGGCTCTTGACGACGAGCTGCC
GGCGCTGTTCGAGGTGTTCAGGGGCAAGGAGGAGGTGCTGCTGCGGGAGGGCGGCGACGGGTACGGCGGCGACGCGAGGA
GGCAGGCGGCCGTGGGGTGGGCGACGCGCGCGGCGGCCAGGCTCGGCTTCTCCGCCCTCACGGCCGCGCTCGCCGCCGCG
TACCTCGACCGCTGCTTCCTCAGCGGCGGCGCGCTGCGGCTCGGGGACCAGCCGTGGATGGCGCGGCTCGCCGCCGTCGC
CTGCGTGGCGCTCGCCGCTAAGGTGGAGGAGACGCGGGTGCCCGTGCTCCTCGACCTCCAGCTCTGCGCCGCCGAGAGCG
CCGGCGACGCCGACGTGTTCGACGCCAAGACGGTGCGCCGGATGGAGCTCCTCGTGCTCTCCGCGCTCGCCTGGCGGATG
CACCCCGTCACGCCATTCTCCTTCCTCCACCCCGTGCTCGCCGCCGCGCGCCTGCGCCAGTGCGAGAGCGTCCTGCTCGC
GGTAATGCCAGGTGGGTTCATGGCTCTTCCCCGTCCATGCATTGCTGTCTCAAGAATAAAAGACTCCATCTTTACGTCAA
GCGTGTTCTCACTTTGCGCGCGTGGCAGACTGGAGCTGGCCACGGTACCGCCCGTCGGCGTGGGCTGCGGCGGCATTGCT
CGCGACGGCCGGCTACGGCAGTGGCGACGGCGACGCCGAGCTCTTGGCGCTCATCAACGCCCCCGAGGTCAGCACCACAA
ACTTGTCGTTAGCGGTTGCCACATTATTACTACCAGCTGTCTTCGTGCACACTCGTGCCAATGCCACTGTTTGTGCTCAA
CTGATGGGCTTGCCAATGCAGGACGAGGTGGCGGAGTGCGTCAAGATCCTCTCCGGGGAGGCGGCGGCGGGATTCATGGG
CTTCGGCGGCGACAATAAGCGCAAGCGCGCGGCAGCGGGGCTGCACTCGCCGCCGCTGAGCCCGAGCGGCGTGATCGGCG
CGGCGGCATACTTCAGCTGCGAGAGCTCGTCCAGCAGCGCGGACTCACGCTCCGGCGCCGCCACCGCCTGGCCGGGGTCA
GTCTCCGTGTCGTCCTCCCCGGAGCCCGCCGGCCGGCCGCTCAAGCGCGCCACCGCCACGGCGATGATGCTTCCACCCGA
CGAGGAGAGCCGCGACGCCTGGCGTTAGATGCCAACCCCGCCCCGCGGCGCCGGACTAGCTACTACCTATAGCTCGCCGT
AGAACAACAGCCGGCGATCAGGGAAGGCCGTAATGAGAAGCCGGCCTGGGGGGAGAAGTAAAAAACGTGTAATTTTGCAA
TGCGGCTGGA-AAAGACGGGTCCTGTAGGGGGGAGGAGGCAGGGAGATTAGCCATTGATGGCTCTTGGAGTAGCACT-CT
CATGGAGGAGGGGAGGGACAAGGTAGGCGGCAGGGCAAGTTTGCTCCATCTCCGGCTTGCTCCCTCCCTACGACGGCGCC
ATGAATGCAATTCCCCACTTCCCATGAGCTCTATCTACATCTGCATTGATTAATGCCCCCCTTGCTGGCTTCTCATTTTA
TCTAAATAAATGTGGATAAACCTTGATCACTTGTTCTCTCTGATGATGGTGCCTTGATTGTGTGCTGCATG---CTACTG
CCTTGGCATTAAAACTGATGGAATGTC--TGTTCATGTGCCATGACTAATAATGAGATGGGGGTCGAGCACTACGGGAGG
AAATGTTCCGATGTAGTAGGGCAAAATA-----GAAAACTACGAAGAATATTTTTAGAGGGTGCTTTTTTTGAAATATTT
TAGAGGGTGCTTTTTTTGAAATATTTTAGAGGGTGCTCATATTGAAAGAAAATTAGTTATTTGACCACAGACGAGAAAAT
AGGGCTGCACAACCCTACAAACAAGGTTCTTCAAAATCAACGTATCAAGGGAAGACACGACATTGAGGAAGACACGACAT
TGCCATATCTTCACCCCATAGAGCATGTATTAGCAAACTCCAAAACGACGATATTGCCATATCTTTCACCCCAAAACAAT
GTCTTCAACAAAGACGCCGTGCGTAAACACCGTCCTAGCAAGATGCGACCATCAAATGTCGGACCATGGTTTTTCACCCT
TGAGTTCGACACCCCCCTGAGTACCACCAAGCCAAAGTTATCTTTGGCATGGAGGGGCAAACACACCATGGTCATGGAAA
>chr5B_4
---TAGGATCAGGAGGAGGGCGAAAAAG-CGAGAAATTTGTGGTGGACTCCTTGGAGGTGCGCTGGTGCTCTCCGGTGAA
AGAAACGAAGAGAAATGGCGGGTAAATGGGAAGGGCTATTTTGCAAAAAGACCAAAGATCAAAGTAAGTATACGACTCAA
ACACAGTGAGTGAGGGTGTATATCTTTTTGTTTTG-GCGGGAAATGAGGGTATAT----------------------CTT
TGGAGAGCATGTCATGCCGAAGACAATTTGAAAACCTACGTATTTTTTGATTAAAAAAATCTTTGAAAAATCC-CCTTTC
ACAGAGAATATGCCACGGCATTTGTGGAAATATGATTTTGGCAGCAGGGAAAGCCGGCTCGGCGGCAAGCGTCCCAGCGA
GGAGGCAAGGTCCATCCATCACAAGCGAGCAGAGCA------AGA------AAAGACAGCACTGCTCGCCAGCAGCGGCT
CTCGTGTC----CTTCCT-----GGGGAACCCCCGAAAGTTGAACGCCCGGGCGAGGGAAGCCGCGAAAACCCCCCGCAA
AAACCAAAAGCAAACAACAA-CTCACCTCTCCTCCCCTCCCCCAATCTCTCTCTGTCTCCCTGTGCCCGCCTGCCCGCAG
GCC---GCAGCACCAGCACGCACAATACCCCCGCAATAAAGAAGCTGCTGCC-C-TGCCGTTGCGTTGCGTCGCGTGGCG
GGTGGCGCTCCCCT-------TCTCCCTCTCCCTCTCTCTCTCTTCGTCTTCCTCCCGAACCCCAATAAAACCTCCCCGC
CCTTTCCCTCCTATCCCATTTGTGCTGTGTGCTGCGCTCATCACTGCCCCCCACCACGCCTCCCACTGCTCGAGGCCAGC
TAAAGCAGCCA----ACCAGCCGTAGCCGCAGTTAAAGCCAACCGGCTACCTCGC-----CTCGCCTCGCCATGGAAGGG
GAGCCGCTCTCCTCTTCCGTTCCCGCCGCGCCCTGAGCAGGACCAAGCACCACTTA-----TCCCCCGTTACGTCACTGA
ATCTGTACCCACGAGAGCACGTTGTAGCCATGGCCTTTGCCGCGCTCTTTGTTGACTCGCTGTACTGCCCAGAGGAGCAC
CACGACCTGTTCCAGGAGCCGGCCGAGGAGCAGTGGCCGGAGCAGCAGCCACCGG---TGGCTCTTGACGACGACCTGCC
GGCGCTGTTCGAGGTGTTCAGGGGCAAGGAGGAGGTGCTGCTGCAGGAGGGAGGCGACGGGTACGGCGGCGACGCGAGGA
GGCAGGCAGCGGTGGGGTGGGCGACGCGCGCGGCGGCCAGGCTGGGCTTCTCCGCCCTCACGGCCGCGCTCGCCGCCGCG
TACCTCGACCGTTGCTTCCTCAGCGGCGGTGTGCTGCGGCTCGGGGACCAGCCGTGGATGGCGCGGCTCGCCGCCGTGGC
CTGCGTGGCGCTCGCCGCCAAGGTGGAGGAGACGCGGGTGCCCGTGCTCCTCGACCTCCAGCTCTGCGCCGCCGAGAGCG
CCGGCGACGCCGACGTGTTCGATGCCAAGACGGTGCGCCGGATGGAGCTCCTCGTGCTCTCAGCGCTCGCTTGGCGGATG
CACCCCGTCACGCCCTTCTCCTTCCTCCACCCCGTCCTAGCCGCCGCGCGCCTGCGCCAGTGCGAGAGCGTCCTGCTCGC
GGTAATGCCAGGTGGGTTCATGGCTCTTCCCCGTCCATGCATTGCTGTCTCAAGAATAAAAGACTCGATCTTTACGTCAA
GCGCGTTCTCACTTTGCGCGCGTGGCAGATTGGAGCTGGCCACGGTACCGCCCGTCGGCGTGGGCTGCGGCGGCATTGCT
CGCGACGGCCGGCTACGGCAGTGGCGACGGCGACGCAGAGCTCTTGGCGCTCATCAACGCCCCCGAGGTCAGCACCATAA
ACTTGTCGTTAGCGGTTGCCACATTATTAC---CAGCTGTCTTCGTGCACACTCGTGCCAGTGCCACTGTTTGTGCTCAA
CTGATGGGCTTACCAATGCAGGATGAGGTGGCGGAGTGCGTCAAGATCCTCTCCGGGGAGGCGGCGGCGGGCTTCATGGG
CTTCGGCGGCGACAATAAGCGCAAGCGCGCGGCAGCGGGGCTGCACTCGCCGCCGCTGAGCCCGATCGGCGTGATCGGCG
CGGCGGCATACTTCAGCTGCGAGAGCTCGTCCAGCAGCGCGGACTCACGGTCCGGCGCCGCCGCTGCGTGGCCGGGGTCA
GTCTCCGTGTCCTCCTCCCCAGAGCCCCCCGGCCGGCCGCTCAAGCGCGCCACCGCCACGGCGTTGATGCTTCCGCCGGA
CGAGGAGAGCCGCGACGCCTGGCGTTAGATGCCAACTCCGCGCCACGGCGCCGGACTAGCTACTACCTATAGCTCGCCGT
AGAACAACAGCCGGCGATCAGGGAAGGCCGTAATGAGAAGCCGGCCAGGGGGGAGAAGTAAACAAGGTGTCATTTTGCAA
TGCGGCTGGA-AAAGACGGTTCCTGTAGGGGGGGGGAGGTAGGGA-ATTAGCCATTGATGGCTCTTGGAGTAGCATT-CT
CATGGAG-----GAGGGACAAGGTAGGCGGCAGGGCAAGTTTGCTCCATCTCCGGCTTGCTCCCTCTCTACGACGGCGCC
ATGAATGCAATTCCCCACTTCCCATGAGCTCTATCTACATCTGCATTGATTAATG------TTGCTGGCTTCTCATTTTA
TCTAAATAAATGTGGATAAACCTTGATCACTTGTTCTCTCTGATGATGGTGCCTTGATTGTGTGCTGCA------TACTG
CGTTGGCATTAAAACTGATGGAATGTCTGTGTTCATGTGCCATGACTAATAATGAGACGGGGGTCGAGCACTACGGGAGG
AAATGTTCTGATGTAGA---GCAAAATA-----GAAAACTATGAAGAATATTTTTAGAGGGTGCTT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr5D_5
----AGGATCTGGAGGAGGGTGTAAAAA-CAAGAAATTTGTGGTGGACTCCTTGGAGGTGCGGTGGTGCTCTCCGGTGAG
AAA--CGAAGAGAGATGGAGGGTAGACCGGAAGGGCTATTTTGCAAAAAGATCGAACATCAAAGTAAGTATACGGCTCAG
ACACAGTGAGTGAGG--GTATATCTTTTTGTTTTTTGCGGGAAATGAGGATATAT----------------------CTC
TGGAGAGCATGTCATGCCGAAGGCAATTTGAAAACCCACGTATTTGATA--TAAAACAATCTTGGAAAGAACCTCCTTTC
ACAGAGAATATGCCACTGCATTTGTGGAAATATGATTTTGGCAGGAGGGAAAGCTGGCTCGGCGGCAAGCGTCCCAGCGG
GGAGGCAAGGTCCATCCATCACAAGCGAGCAGAGCG------AGAGCGAGAAAAGACAGCACTGCTCGCCAGCAGCGGCT
CCCGTGTC----CTTCCTTCCTGGGGGAACCCCCGAAAGTTGAACGCCCGGGCGAGGGAAGCC-------------GCGA
AAACCAAAAGCAAACCAAGTCCTCTCCCCTCCTCCCCTCCCCCAATCTCTGTCTCCCT------------CTGCCCGCAG
GCC---GCAGCAGCAGCACGCACACTACCCCCGCAATAAAGAAGCTGCTGCC-CCTGCCGTTGCGTTGCGTCGCGTGGCG
GGTGGCGCTCCCCT-------T----------CTCTCTCTCTCTTCGTCTTCCTCCCGAACCCCAATAAAACCTCCCCGC
CCTTTCCCTCCTATCCCATTTGTGCTGTGTGCTGCGCTCATCACTGCCCCCCACCACGCCTCCCACTGCTCGAGGCCAGC
TAAAGCAGCCA----ACCAGCCGTAGCCGCAGTTAAAGCCAACCGGCTAGCTCG-----CCTCGCCTCGCCATGGAAGGG
GAGCCGCTCTCCTCTTCCGTTCCCGCCGCGCCCTGAGCAGGACCAAGCACCACTTA-----TCCCCCGTTACGTCACTGT
ATCTGTACCCACGAGAATACGTTGTAGCCATGGCCTTTGCCGCGCTCTTTGTTGACTCGCTGTACTGCCCGGAGGAGCAC
CACGACCTGTTCCAGGAGCCGGCCGAGGAGCAGTGGCCGGAGCAGCAGCCACTGCCGTTGGCTCTTGACGACGAGCTGCC
GGCGCTGTTCGAGGTGTTCAGGGGCAAGGAGGAGGTGCTGATGCGGGAGGGCGGCGACGGGTACGGCGGCGACGCGAGGC
GGCAGGCGGCGGTGGGGTGGGCGACGCGCGCGGCGGCCAGGCTGGGCTTCTCCGCCCTCACGGCCGCGCTCGCCGCAGCG
TACCTCGACCGCTGCTTCCTCAGCGGCGGCGCGCTGCGGCTCGGGGACCAGCCGTGGATGGCGCGGCTCGCCGCCGTCGC
CTGCGTGGCGCTCGCGGCCAAGGTGGAGGAGACGCGGGTGCCCGTGCTCCTCGACCTCCAGCTCTGCGCCGCCGAGAGCG
CCGGCGACGCCGACGTGTTCGATGCCAAGACGGTGCGCCGGATGGAGCTCCTCGTGCTCTCGGCCCTCGCTTGGCGGATG
CACCCCGTCACGCCCTTCTCCTTCCTCCACCCCGTCCTCGCCGCCGCGCGCCTGCGCCAGTGCGAGAGCGTCCTGCTCGC
GGTAATGCCAGGTGGGTTCATGGCTCTTCCCCGTCCATGCATTCCTCTCTGAAGAATAAAAGGCTCGATCTTTACGTCAA
GCGTGTTCTCACTTTGCGCGCGTGGCAGATTGGAGCTGGCCACGGTACCGCCCGTCGGCGTGGGCTGCGGCGGCATTGCT
CGCGACGGCCGGCTACGGCAGTGGCGACGGCGACGCCGAGCTCTTGGCGCTCATCAACGCCCCCGAGGTCAGCACCACAA
ACTTGTCGTTAGCGGTTGCCACATTATTGC---CAGCTGTCTTCGCGCACACTCGTGCCAATGCCACTGTTTGTGTTCAG
CTGATGGGCTTGCCAATGCAGGACGAGGTGGCGGAGTGCGTCAAGATCCTCTCCGGGGAGGTCGCGGCGGGCTTCATTGG
CTTCGGCGGCGACAATAAGCGCAAGCGCGCGGCAGCGGGGCTGCACTCGCCGCCGCTGAGCCCGAGCGGCGTGATCGGCG
CGGCGGCATACTTCAGCTGCGAGAGCTCGTCCAGCAGCGCGGACTCACGCTCCGGCGCCGCCACTGCGTGGCCGGGGTCA
GTCTCCGTGTCGTCCTCCCCAGAGCCCCCCGGCCGGCCGCTCAAGCGCGCCACCGCCACGGCGATG---CTTCCACCAGA
CGAGGAGAGCCGCGACGCCTGGCGTTAGATGCCAACTCCGCCCCGCGGCGCCGGACTAGCTACTACCTATAGCTCGCCGT
AGAACAATAGCCGGCGATCAGGGAAGGCCGTAATGAGAAGCCGGCCAGGGGGGAGAAGTAGAAAAGGTGTAATTTTGCAA
TGCGGCTGGAGAAAGACGGTTCCTGTAGGGGGGAGGAGGTAGGGAGATTAGCCATTGATGGTTCTTGGAGTAGCATTTCT
CATGGAG-----GAGGGACAAGGTAGGCGGCAGGGCAAGTTTGCTCCATCTTCAGCTTGCTCCCTCTCTACGACGGCGCC
ATGAATGCAATTCCCCACTTCCCATGAGCTCTATCTACATCTGCATTGATTAATGCCCCCCTTGCTGGCTTCTCATTTTA
TCTAAATAAATGTGGATAAACCTTGATCACTTGTTCTCTCTGATGATGGTGCCTTGATTGTGTGCTGCATACTACTACTG
CGTTGGCATTAAAACTGATGGAATGTCTGTGTTCATGTGCCATGACTAATAATGAGGTTGGGGTCGAGCACTACGGGAGG
AAATGTTCCGACGTTGG---GCAAAATACAGTAGAAAACTATGACGAAGAATGT--------------------------
-----------------------TTTTAGAGGGTGCTCAGATTGAAAGAAAATTAGTTATTTGCCCCCAGACGAGAAAAT
AGGGCTGCACAACTCTACAACTAAGGTTCTTCAAAAGCAACGCATCAAGGAAA------------------------CAT
TGCCATATCTTCACCCCATCGAGCACGTCTGAGCAAACT-------------------------------CCAAAACAAT
GTCTTCAGCAAAGACACCATGAGTAAACACCGTCCTGGCAAGGTGCGACCATCGAATGTCGGACCATGGGTTTTCACCTC
GAAGTTCAACACCCC------TACCACCAAGCCAAAGTTATCTTTGGCATGGAGGGGCAAATACACCATGGTCATGGAAA
>SNPs
SSS------SS-----------------S-------------SS------------------------------------
------------S-------------------------------S------S-------------S---S----------
-S-------S-----S-------------S------S------------------SSSSSSSSSSSSSSSSSSSSSS---
------------------------------------------------------------------------S-------
--S------------------------------------------------------S---------------SS-----
----------------------------------SSSSSSSS--------------------------------------
--------SSSS--------------------------------------------------------------------
------------------S----------S-----------------S--------------------------------
---SSS-------------------S--------------------------S---------------------------
--------------SSSSSSS-----------------------------------------------------------
---------------------------S----------------------------------------------------
-----------SSSS----------------------------------------SSSS----------------S----
-------------------S------------------------S---------SSSSSSS-------------------
-------------S-----------S-----------------------------------S------------------
-----------------------------------------S--------S-----------------------------
--------------------------------------------------------------------------------
----------S--------------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
----------------------S--------------------------------------S--------S---------
--------------S--------------------S--------------------------------------------
------------------------------------------------------------------S-------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------SSS-----------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
----------------------------------------------------------------S--S------------
--------------------S------S-------------------------------------------------S--
------------------------------------S-------------------------------------------
----------------------------------------------S------------------S--------------
-------------------S-------------------S-----------------------------------S----
-------SSSSS------------------------------------------------------S-------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-S------------------------------------------------------------------------------
----------------SSSS---------------------S------------------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS----------------S-----------------------S--S-------------
-------------S------SS--------------S-----S-------S--SSSSSSSSSSSSSSSSSSSSSSSS---
-------------------S-----S--S-S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
-------S-------S--S--S--------------S-----S----------S---------------S--------SS
SS-----S-------SSSSSS----------------------------------------S------------------
>forward_435
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CCATCACAAGCGAGCAGAGG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_1951
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TACCAGCTGTCTTCGTGCAC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_1102
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CGCTCTTTGTTGACTCGCTC------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_3106
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AGGAAGACACGACAT
TGCCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
