>input_sequence_55738
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-------------------------------------------------------------------ATGGGTACTGCCA
GCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCCAGCGTCTCCAGCTCCAGTGGGCAGCTGCAGGTGGGGTTCTAC
TCCAAGTCGTGCCCCAGCGCCGAGTCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCGCCGCCGACTCCACCATCCTCCC
CGCCCTCCTCCGGCTCCAGTTCCACGACTGCTTCGTCAGGGTACGCGCGCGCGCTCTCCCTCGGCAGTTCGTCGGGGTAA
AGTAATTTGTACCGTGTTGACGTAATGACGTGGGAATTCTCTGTGACGCCTTC-------TCTCAGGGGTGCGACGCGTC
GGTGCTGATCAAGGGCGGGAACAACAACGCGGAGGTGGACAACAACAAGCACCAGGGGCTCCGCGGGATGGACGTCATCG
AAAACGCCAAGGCGCAGCTCGAGTCCGAGTGCCCCGGCGTCGTCTCGTGCGCCGACATCGTCGTCCTCGCCGCGCGCGAC
GCCGTCGCATTCGTG-----AGTAACATCCTCGCGCGCGCTGCGCATATCGGCATATGCATTTGCATGCGTGGAAAGCGG
GAACTGATCGTTTTCGTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACGGGGCGCCGCGACGGGAAGGTGTCCA
ACGTGCGGGACGGCGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTCCAAGTTCCGCGCCAGCGGCCTC
GACGACAAGGACCTCGTCCTCCTCAGCTGTAAGCAAGCAAACCAACCCACCTCTTTCCTTGCGTTCCCTCGATCGATCAT
GGAGGACCCATGTCCCTACCTAACCCGTCGACGGCCGCATGCACGCAGCGGCGCACACGGTGGGCACAACGGCGTGCTTC
TTCATCCAGGACCGGCTCTACAAGTTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGATCCGTCGATCCCGGACGGCTTCCT
GTCGGAGCTCAAGTCCCGGTGCGCGCCGGGGGACTCCAACTCGCGCGTCTCCCTGGACCGCGGCAGCGAGCGCGTGTTCG
ACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCGGTGATCGCCTCCGACGCCGCGCTCTACAACGACACCAGCACC
GTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCCGGCAGGACTTCGCGGACTCCAT
GGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTCTGCTCCAAGTTCAACTGA----
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>chr4A_1_TraesCS4A01G201700
GTTCAGCTCTAACCGAAAAAACAGTCCATGCCGGCCCTA-TGCATGCCTGGACAACGAACATGGTTTCCAAACCCATGAT
GCAAAGCGTCTCCCTGCACGTAATTGCTCTGTCATAAAGTCCAGAAACCCCAAAACCAGGTGAGAACTCGCACACTTTCG
TAGTTGAGGGCTTGAGGCGGCAATCCGGCTGCGACCATCTCATGGCATGCATGCA-----AAGCTGCCATGCCGCAGCAG
CAAATCTCTACTCGCTCGCTGGCAACTTGCCGCATGCCCTTTTGCCGTGACAACTGGGCCATAAATCGTGGCACGCTGGA
GCCGCGCGCATCAATACCGGCCGGTGGCCCGCGCACATGGACGCATGGCCGGCCAGGCTCACCATGGTCCAGGAGAAACT
TCTCTCCCCGGCTATTCCCGGAACCGTGCATGGCATTCATGGCCGTGTCCCCGCAAAGATTGAATTGGGAGATCAACTTC
TGGGGCTAGGTGGTAGATTCATCAGCTTCGCCGTACTCGACATTTTCTTTCACGTTATAAATCCGAAAGGACGCATGAAG
AATCTATCTATGCGACGCATTTCGATCCGATCTCCCACCAGAATCCTCCTCGTAAAATCCTCACTTGGGCTTTCGTGCAT
GTCTTCAGTAGTACTGCGGTAAATACTGGTCTACGTTGTTGTTCGTGAAATTACGTATTGCTACCTGA--------CACC
TGTACTCCAAATATGACAAACTTTCACCTCGGCAAGACCCTCCTACAGCCAAGAGTTCATGCTGCTGC------------
-TGCTTCAGTATGCGGTTTTGTACCACTAAATGCTTGGCACCTACTCTTTGCGGTGAGGTCAAATCATCCATGTGTTGGC
TGGCCTACGGTTCTACTTCTCCACCGGACGAGAGCTTATAAAACCCCATTAACGCAGCGCAGAGGACCTTGATCCTAGCT
CTCTCCTCAGGCCTTTTCTTTCTCTCTCTCTCTCGCGAGCTCCTCGCTCTCTAGATTCTTTTCTAGGATGGGTACTGCCA
GCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCCAGCGTCTCCAGCTCCAGTGGGCAGCTGCAGGTGGGGTTCTAC
TCCAAGTCGTGCCCCAGCGCCGAGTCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCGCCGCCGACTCCACCATCCTCCC
CGCCCTCCTCCGGCTCCAGTTCCACGACTGCTTCGTCAGGGTACGCGCGCGCGCTCTCCCTCGGCAGTTCGTCGGGGTAA
AGTAATTTGTACCGTGTTGACGTAATGACGTGGGAATTCTCTGTGACGCCTTC-------TCTCAGGGGTGCGACGCGTC
GGTGCTGATCAAGGGCGGGAACAACAACGCGGAGGTGGACAACAACAAGCACCAGGGGCTCCGCGGGATGGACGTCATCG
AAAACGCCAAGGCGCAGCTCGAGTCCGAGTGCCCCGGCGTCGTCTCGTGCGCCGACATCGTCGTCCTCGCCGCGCGCGAC
GCCGTCGCATTCGTG-----AGTAACATCCTCGCGCGCGCTGCGCATATCGGCATATGCATTTGCATGCGTGGAAAGCGG
GAACTGATCGTTTTCGTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACGGGGCGCCGCGACGGGAAGGTGTCCA
ACGTGCGGGACGGCGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTCCAAGTTCCGCGCCAGCGGCCTC
GACGACAAGGACCTCGTCCTCCTCAGCTGTAAGCAAGCAAACCAACCCACCTCTTTCCTTGCGTTCCCTCGATCGATCAT
GGAGGACCCATGTCCCTACCTAACCCGTCGACGGCCGCATGCACGCAGCGGCGCACACGGTGGGCACAACGGCGTGCTTC
TTCATCCAGGACCGGCTCTACAAGTTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGATCCGTCGATCCCGGACGGCTTCCT
GTCGGAGCTCAAGTCCCGGTGCGCGCCGGGGGACTCCAACTCGCGCGTCTCCCTGGACCGCGGCAGCGAGCGCGTGTTCG
ACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCGGTGATCGCCTCCGACGCCGCGCTCTACAACGACACCAGCACC
GTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCCGGCAGGACTTCGCGGACTCCAT
GGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTCTGCTCCAAGTTCAACTGAGAGA
GACCCATCCATGGATCCAGATTCCATTCATTGCGCTGCCGGCCGGAGTACTGGTACTGGTT-GGCTAGCTGGAGATGAAA
AGCACTAGCTAGCCCATGCGGACATGCATCTCGTGGGTGCATGGCCCGGTCTCGTGGCGCTTTCATGGC-TTTTCTTCTT
CTTCAATTTATTGTGTACATGTTATTGAAAAGAGAGAGGGGAAATTTAGTGGATTCATGTGATTCTGGCGCCAAGGTCTA
GTACGTACGGCCAAGGATCTGTGCAGTTTTCTCTTTTGCAGCGGCTGGAAGCGAGATTAAATTCATATAGCTAGGGTATA
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-----TATAAGATGTGCTTCTGTATGCTTGTATGTACACTACACACACCATATGTGCAATTAAGTGGAGGTGTAATTTAT
GGTCTTGTCTTGGGTAA---------TTATCTGTGCCAACAGCAATTGGAAAGAAGTGTCAAATGTTGCAAAAACAAAAT
CTTCTTCTGGCATATAGGAGTACTACGTACAATCTTTGTACCACAGTCAAGTGTCGAGGCCGTAGCAGAGATTGTCGTCG
TTGCACCATGATATATTGATAGCTCTAGACGACGCGCGAGATCAAAAAAAAAAAATCAGCCACTCAGGGACCTGGGGATT
GTCGAGGACCAAATCTCGTTGAAAGAGATCCCAAGGAAATCTTTAC-TTTCGGGAGGTGCATGGAACTGTAAGGAAGACC
TCAGTTAATGCGTTTCTCCTGGGTTTACCAAATTGGCCTAGCTCCTGCTAAGTCACCGCGAAGAAAGAAAACTCCTGTGC
ATATTCATGTGGTAGAATCCAAGCTGC-GGGTGCTGAATGTGTCAGATGGAGGATGCAAATGGGTGGCTGAAACACAT-A
TTGAGTAAAAGTGTACTGCCCTGTTGAATGTTGATGGAACGGCCTTTGCTTCTATGCTCTGTTCGGGTAGTTGGCGGAGT
AGGAAGTAGGCAGTGTTAGCTGGGTTTGTCTTTATTGGGGACGAGAACTTTTTTT
>chr4B_7
------CTCTAACAGAAAAAACAGTCCATTACCGGCCTTGTGCATGCCTGGACAACGAACATGGTTTCCAAACCCATGAT
GC-AAGCGTTTCCCTGCACGGAATTGCTCTGTCATAAAGCCCCAAAACCCCAAAATCAGGGGAGAACTCGCACACTTTCG
TAGTTGA-----------GGCAATCCGGCTGCGACCATCTCATGGCATGGCATGGCATGCAAGCTGCAATGCCGCAGCAG
CAAATCTTTACTCACTCGCCGGCAACTTGCCGCATGCCCTTTTGCCGTGACAACTGGGCCATAAATTGTGGCACGCTGGA
GCCGCGCGCATCAATACCGGCCGGTGGCCTGCGCACATGGACGCATGGCCGGCCAGGCTTACCATGGTCCAGGAGGAACT
TCTCTCCCCGGCTATTCCCGGAACCGTGTATGGCATTCATGGCCGTGTCCCCGCAAAGATTGAATTGGGAGATCAACTTC
TGGGGCTAGGTGGTAGATTCATCAGCTTCGCCGTACTCGACATTTTCTTTCACGTTATAAATTCGAAAGGACGCACGAAG
AATCTATGCGGCA----CATTTCGATCAGATCTCCCACCAGAATCCTCCTCGTGAAATCCTCACTTGGGCTTTCATGCAT
GTCTTCAGTACTACA---GTAAATACTGGTCCAGATTGTTGTTCGTGAAATTATGTATTGCTACCTGACACGGTGACACC
TGTACTCCAAATATGACAAACTTTCACCTCGGCAAGGTTATACTATCTTGTTCTAGGAGTATGCCTGCCTGCATGCCTGC
ATGCTGCAGTATGCAGTTTTTTACCACTAAATGCTTGGCACCTACTCTTTGCGGTGAGGTCAAATCATCCATGTGTTGGC
TGGCCTACGGTTCTACTTCTTCACCGGACGAGAGCTTATAAAACCCCATTAACGCAGCGCAGAGGACCTTGATCCTAGCT
C--TCCTCGGGCCTTTTCTTTCTCTCTTTCTCTCGCGAGCTCCTCGCTCTCTAGATTCTTTTCTAAGATGGGTACTGCCA
GCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCCTGCGTCTCCAGCTCCAGTGGGCAGCTGCAGGTGGGGTTCTAC
TCCAAGTCGTGCCCCAGCGCCGAATCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCGCCGCCGACTCCACCATCCTCCC
CGCCCTCCTCCGTCTCCAGTTCCACGACTGCTTCGTCAGGGTACGCACGCGCGCTCTCCCTCGGCAATTCGCCAGGGTAA
AGGCAGTAATTCGTCGTGTGTT---TGACGTGGGAATTCGGCTGGTTCTGCGCCTCTCGATCTCAGGGGTGCGACGCGTC
GGTGCTGATCAAGGGCGGGAGCAACAACGCGGAGGTGGACAACAACAAGCACCAGGGGCTCCGCGGGATGGACGTCATCG
AGAACGCCAAGGCGCAGCTCGAGTCGGAGTGCCCCGGCGTCGTCTCGTGCGCCGACGTCGTCGTCCTGGCCGCGCGCGAC
GCCGTCGCATTCGTAAGTACAGTAACATTCTCGTGCGCGCTGCGCATATGCCTGCATGGATGGC-----------AGTGG
GAATTGATCGGTTTCTTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACAGGGCGCCGCGACGGGAAGGTGTCCA
ACGTGCGGGACGCTGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTCCAAGTTCCGAGCCAGCGGCCTC
GACGACAAGGACCTCGTCCTCCTCAGCTGTAACCAAGCAAACCAACCCACCTCTTTCCTTGCGCTCCCTCGGTCGATCAT
GAACCCCTGTC-------CCTAACCCGTCGATGGCGGCATGCATGCAGCGGCGCACACGGTGGGCACGACGGCGTGCTTC
TTCATCCAGCAGCGGCTCTACAGCTTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGACCCGTCGATCCCGGACGGCTTCCT
GTCAGAGCTCAAGTCCCGGTGCGCGCCGGGAGACTCCAACTCGCGCGTCTCCCTGGACCGCGGCAGCGAGAGCGTCTTCG
ACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCGGTCATCGCCTCCGACGCGGCGCTCTACAACGACACCAGCACC
GTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCCGCCAGGACTTCGCGGACTCCAT
GGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTCTGCTCCAAGTTCAACTGAGAGA
GACCCGTCCATGGATCCAGATTCCATTCATTGCGCTGCCGGCCGGA------GTACTGGTT-GGCTAGCTGGAGATGAAA
AGCACTAGCTAGCCCATGCGGACATGCATCTCGTGGGTGCATGGCCCGGTCTCGTGGCGCTTTCATGGC-TTTTCTTCTT
CTTCAATTTATTGTATACATGTTATTGAAAAGAGAGAGGGGAAATTTAGTGGGTTCATGTGATTCTGGCGCCAAGGTCTA
GTACGTACAGCCAAGGATCTGTGCAGTTTTCTCTTTTGCAGCGGCCGGAAGCGAGATTAAATTCATA--GCTAGGGTATA
AGATGTATGGCGCGGAGTGTTGGCCGACTAAAAGATGACATGTTCAACAGTTAGGTGTGGCGAAGATGCGTATGTTGAGA
TGGATGTGTGGCCACACGAGGAAGGATCGAGTCCGGAATGATGATATACGAGATAGAGTTGGGGTAGCACCAATTGAGGA
GAAGCTTGTCCAACATCGTTTGAGATGGTTTGGGCATATTCAGCGCAGGCCTCCAGAAGCTCCAGTGCATAGCGGACGGC
TAAAGCGTGCGGAGAATGTCAAGAGAGGGCGGAGTCGACCGATTTTGACATGGGAGGAGTCCGTTAAGAGAGACCTGAAG
GATTGGAGTATCGACAAAGAGCTAGCTATGGACAGGGGTGCGTGGAAGCTTGCTATCCATGTGCCAGAGCCATGAGTTGG
TTGCGAGATCTTATGGGTTTCACCTCTAGCCTACCCCAACTTGTTTCGGACTAAAGGCTTTGTTGTTGTTGTTGTTGTTG
TAGGGTATAAGATGTGCTTCTGTATGCTTGTATGTACACTACACACACCATATGTGCAATTAAGTGGAGGTGTAATTTAC
GGTCTTGTCTTGGATTTTTGGGGTATTTATCTGTGCCAACTGCAATTGGAAAGAAGTGTCAAATGTTGC-AAAACAAAAT
CTTCTTCTGGTATATAGGAGTACTATGTACAATCTTTGTACTACAATCAAGTGTCGAGGCCGTAGCAGAGCTCGTCGTCG
TTGCT--------------------------------------------------------ACTCAGGGACCT-GGGATT
GTCGAGGACAAAATCTCGTCGAAAGAGCTCCCAATGGAATCTTTAC-TTTCACGAGGTGCATGGAACTGTAAGGAAGACC
TCAGTTAATGCGTTTCTCCTGGGTTTACCAAATTGG----------------TCACCGCGAAGAAAGAAAACTCCTGTGC
ATATTCATGTGGTAGAATCCAAGCTGC-GAGCGCTGAATGTGTCAGCTGGAGGAGGCAAATGGGTAGCTGCAACATATCA
TTGAGTGAAAGTGTACTGCCCTGTTGA-------TGGAATGGCCTTTGCTTCTATGCTCTGTTCGGGTAGTTGGCGGAGT
AGGAAGTAGGCAGTGTTAGCTGGGTTTGTCTTTATTGGGGACGAGAACTTTTTTT
>chr4D_74
--------------------------------------------------------------------------CATGAT
GCAAAGCGTCTCCCTGCACGGAATTGCTCTGTCATAAAGCCCAGAAACCCCAAAATCAGGGGAGAACTCGCACACTTTCG
TAGTTGA-----------GCCAATCCGGCTGCGGCCATCTCATGGCAT------GCATGCAAGCTGCCATGCCGCGGCAG
CAAATCTTTACTCACTCGCCGGCAACTTGCCGCATGCCCTTTTGCCGTGACAACTGGGCCATAAATCGTGGCACGCTGGA
GCCGCGCGCATCAACACCGACCGGTGGCCCGCGCACATGGACGCATGGCCGGCCAGGCTCACCATGGTCCAGGAGAAACT
TCTCTCCCCGGCTATTCCCGGAACCGTGTATGGCATTCATGGCCGTGTCCCCGCAAAGATTGAATTGGGAGATCAACTTC
TGGGACTAGGTGGTAGATTCATCAGCTTCGCCGTACTCGACATTTTCTTTCACGTTATAAATCCGAAAGGACGCATGAAG
AATCTA-CTATGCGACGCATTTGGATCCGATCTCCCACCAGAATCCTCCTCGTAAAATCCTCACTTGGGCTTTCATGCAT
GTCTTCAGTACTACA---GTAAATACTGGTCCAGATTGTTGTTTGTGAAATTACGTATTGC------------TGACACC
TGTACTCCAAATATGACAAACTT-CACCTCGGCAAGACCCTCCTACAGCGAAGAGTTCATGCTGCTGC------------
-TGCTGCAGTATGCAGTTTTGTACCACTAAATGCTTGACACCTACTCTTTGCGGTGAGGTCAAATCATCCATGTGTTGGC
TGGCCTACGGCTCTACTTCTCCACCGGACGAGAGCTTATAAAACCCCATTAACGCCACCCAGAGGACCTTGATCCTAGCT
C--TCCTCGGGCCTTTTCTTTCTCTCTTTCTCTCGCAAGCTCCTCGCTCTCTAGATTCTTTTCTAGGATGGGTACTGCCA
GCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCAAGCGTCGCCAGCTCCAGTGGGCAGCTGCAGGTGGGGTTCTAC
TCCAAGTCGTGCCCCAGCGCCGAGTCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCGCCGCCGACTCCACCATCCTCCC
CGCCCTCCTCCGCCTCCAGTTCCACGACTGCTTCGTCAGGGTACGTACGCGCGCTCTCCCTCGGCAATTCGCCAGGGTAA
AGGAAGTAATTCGTAGTGTGTT---TGACGTGGGAATTCGCCTGGTTCTGCGCCTCTCGATCTCAGGGGTGCGACGCGTC
GGTGCTGATCAAGGGCGGGAGCAACAACGCGGAGGTGGACAACAACAAGCACCAGGGGCTCCGCGGGATGGACGTGATCG
AGAACGCCAAGGCGCAGCTCGAGTCCGAGTGCCCCGGCGTCGTCTCGTGCGCCGACATCGTCGTCCTCGCCGCGCGCGAC
GCCGTCGCATTCGTAAGTA--GTAACATCCTCATGCACGCTGCACATATGCCTGCATGGATGG-----------AAGTGG
GAATTGATCGGTTTCTTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACAGGGCGCCGCGACGGGAAGGTGTCCA
ACGTGCGGGACGGTGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTCCAAGTTCCGCGCCAGCGGCCTC
GACGACAAGGACCTCGTCCTCCTCAGCTGTAACCAAGCAAACCAACCCATCTGTTTCCTTGCGTTCCCTCGATCGACCAC
GGACTCATGTC-------CCTAACCCATCGATGGCGGCATGCATGCAGCGGCGCACACGGTGGGCACCACGGCATGCTTC
TTCATCCAGGACCGGCTCTACAAATTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGACCCGTCGATCCCAGACGGCTTCCT
GTCGGAGCTCAAGTCCCGGTGCGCGCCGGGAGACTCCAACTCGCGCGTCTCCCTGGACCGCGGCAGCGAGCGCGTCTTCG
ACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCCGTGATCGCCTCCGACGCCGCGCTCTACAACGACACCAGCACC
GTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCCGCCAGGACTTCGCGGACTCCAT
GGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTCTGCTCCAAGTTCAACTGAGAGA
GACACATCCGTGGATCCAGATTCCATTCATTGCGCTGCCGGCCGGA------GTACTGGTTTGGCTAGCTGGAGATGAAA
ATCACTAGCTAGCCCATGCGGACATGCATCTCGTGGGTGCATGGCCCGGTCTCGTGGCGCTTTCATGGCTTTTTCTTCTT
CTTCAATTTATTGTGTACATGTTATTGAAAAGAGAGAGGGGAAATTTAGTGGATTCATGTGATTCTGGCGCCAAGGTCTA
GTACGTACGGCCAAGGATCTGTGCAGTTTTCTCTTTTGCAGCGGCTGGAAGCGAGATTAAATTCATA--GC---------
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TAGGGTATAAGATGTGCTTCTGTATGCTTGTATGTACACTACACACACCATATGTGCAATTAAGTGGAGGTGTAATTTAT
GGTCTTGTCTTGGATTTTTGGGGTATTTATCTGTGCCAACTGCAATTGGAAAGAAGTGTCAAATGTTGC-AAAACAAAAT
CTTCTTCTGGTATATAGGAGTACTATGTACAATCTTTGTACCACAATCAAGTGTCGAGGCCGTAGCAGAGCTCGTCGTCG
TTGCACCATGATAT--TGATAGGTCTAGACAACGCACAAGATCAAAAAAAT----TCAGCCACTCAGGGACCT--GGATT
GTCGAGGACCAAATCTCGTTGAAAGAGCTCCCAAGGAAATCTTTACTTTTCACGAGGTGCATGGAACTGTAAGGAAGACC
TCAGTTAATGCGTTTCTCCTGGGTTTACCAAATTGGCCTAGCTCCTGCTAAGTCACCGCGGTGAAAGAAAACTCCTGTGC
ATATTCATGTGGTAGAATCCAAGCTGCAGAGCGCTGAATGTGTCAGCTGGAGGATGCAATTGGGTAGCTGAGACACATCA
TTGAGTAAAAGTGTACTGCCCTGTTGA-------TGCAATGGCCTTTGCTTCCATGCTTTGTTTTGGTAGTTGGGAGAGC
AGGAAGTTGGCAGCGTTAGCTGGGTTTGTCTTTATTGGGGACGAGAACTTTTTTT
>SNPs
SSSSSS-------S---------------SS-S-S---S-----------------------------------------
--------------------S------------------S---------------S----S-------------------
-------SSSSSSSSSSS-------------------------------SSSSSS-------------------------
-------S-----S-----S------------------------------------------------------------
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----------------------------S---------------------------------------------------
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--------------------------------------------------------------------------S-----
----------S---SSSS-------------S-SS---------------------------------------------
-------------------------------------------------S------------------------------
-----S--------S-----------------------------------------------------------------
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-SS-----S------------------S----------------------------------------------------
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------------S---------------------------------S-------------------S----S-S------
--S--S-SS-S-SSS--SSSSSSSS--------------S-SSS-SSSSSSS----------------------------
--------------------S-----------------------------------------------------------
-S------------------------------------------------------------------------------
--------------S------------------S---------------SSSSSS---S--SSSSSSSSSSSSS---S--
---S------S----S--------------------------------------S-------------------------
-------------S------------------------------------------------------------------
--------------------------------S-----------------------------------------------
---SSS-SSSSSSSSSSS-------------S---S-------S-----------------------S------------
-----------------------S--------------------------------S-----------------------
------------------------------S--------------------------------------------S----
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-----------------------------------------------------------S--------------------
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----------------------------------------------SSSSSS----------------------------
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-------------------------------------------------------------------SS-----------
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-------------S-SS-----------------------S----------------------------S----------
----------S--------------S-------------------S------------------------S-S-------
--------------SS------S-------S----S-S------------SSSSS------------------S------
---------------------------S-----------------------SS---------------------------
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-----------------------------S-S--------------S------------------S--------------
---------------------------SSSSSSS-----S----------------------------------------
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>forward_178
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------------------------------------------------------------------------------CG
TAGTTGAGGGCTTGAGGC--------------------------------------------------------------
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>reverse_2076
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---------------------------------------------------------------------------GTTCG
ACACCTCCATCCTCC-----------------------------------------------------------------
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>forward_1330
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------------------------------TGGGAATTCTCTGTGACGCC------------------------------
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>reverse_2372
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---------------------------------------------------GGTACTGGTTGGCTAGCTGG---------
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