>input_sequence_55700
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-ATGTGGCAACCAAAATACCTCATCCTCGTCGCGGTCTCGC------TCTCTGTCCTTGCATGCGCGGTGGTGGGAGACG
GTGGCGGCAGGCCACTGGTGACGGCCGTCACCAAGGACGCGGCCACCTCCCT-------CTACACCATCCCCGTCAAGTC
CGGCCGCCC------GCTGGTCCTCGACCTCTCCGGCCCCATCGTCTGGTCCACGTGCGCCGATGGCGCCCCCCATGACA
CGCTCGAGTGCAACAACATCGACTGCATGCGCGCGCACCGCTTCCACCCGCCCGGCTGCCCGCACACCGGCTACGGCATG
CCCGACGTCCACAACCCCTTCCGGTGCAAGTGCACGGCGCACCCGCACAACCCCGTCTCCGGCGACACCGCGTCGGGGAA
CATGACGCGCGTGGCGCTCTCCGCCAACGCCACCGACGGCATGAACCCGTTGGGCCCGGTGTCGTTCACCGCCGTGACGT
CCTGCGCGCCGAACACCCTGCTACAGGGGCTGCCGGCGGGGGCCGTGGGCGTGGTGGGGCTCGCG---------CGCTTC
AGCCTCGCGTTCCCAGCGCAGGTCGCGGGCACGCAGGGCGTCGCTAACTCGTTCGCGCTCTGCCTCCCTAGCAACCCAG-
--GCAACGGCGTCG---------CCATCTTCGGCGGTGGCCCGCTCTTCGTCCTG---GGGCAGCC------CATCTCGG
AGATGCTGGGCGGCAGCACCCCCCTCCGCAAGCACGGGGACTCCCCCGGCTACTACATCAGGGCCAGCAAGGGCATCACC
GTGGACGGACTGCGGATACTGCCGGGCGATCA------CGCACCGCTCACCATCGGCCTCTCCACGACGAC-------CC
CCTACACGGAGCTACGCAGCGACGTGTACCGCCTGTTCATCAACGCGTTCGACCAGGCGATGGAGCGCTGGGGTGCTGCC
GCTTT------GA---------------GGGTCCCCTCCCCGGCCGAGTCGCCGTTCGAGCTGTGCTACAACAATTCGAA
GCTGTCGCAGACGCGGTTCGGCTTCTTCGTGCCGAGGATCACCCTGATGCTGGACGGCGGCACGAGCTGGCAGGTGTTCG
GCATGAACTCCATTGTGCGGCTGAAC---CGCGCCACGGCGTGCTTAGCTTTCGTCGAGATGAAGGCGGGGAACAAGGCT
GGGT---ATGGCGGCGGTGCGGCGCCGGCGGTGGTCATCGGAGGGTTCCAGATGGAGAACATGCTGCTGGTGTTCGACGA
GGAGAAGCAGACGCTCGGATTCACCACCGGGCGGCACCTCATCACGGGGCTCTCCTGCGGCCACTTCAATTTTACGATGC
CCGCCTAG------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G467100
TGTGCTACACAACTAAGTCACC---ACATGTAATTTTCTTTTCTTTTTCTGTTTCTTCAAAACAAAACAACATACGAGCT
TCAAACTTTGCAGGACAACAAAACATTCTTACTACAATGTGGGTAAAAACTTTCATATTTTTTTGTCCGACATAAATATA
C--------ACAAAACATACGAACTTCAATCTGAAAGTTTTTTCCCACATTCTAGTTAGAATGTTTTGTTGTCCTGCAAA
GTTTCAAGTTCATATGTTGTTTTATTTGAAAGAAGCAAAAAAGACAAAAGTTCTTGCATGAATCTTGATGAAGAAATGGA
TGGCTAGATAAGGGGGTGTTCCAAAGCCTATGCTTTCTCAAATGTTAACCGGAAATGGGGGCGGCTAGGGTGTCCCTTGT
CATCCATCTTAAATAGCCGGATTTGGCCCCTCGGACGGCATGCCAAAGAGGCGACGTGAATGCTTCCTCACTAAACCATT
GAGCTCCCCCGCAAACCGCTGAGTTTTCGCATGAGCCTATCGTTCAGTCCGATGTGGCGAACATGTCCGGG-----CTAT
ATCTCCCCGTGTA-TGAGCTTAATATGAGAGGGGTCGGACAGCCTAGATGCTTGGTCGGATTTGTGACGTTTTTTATGGA
GGCGTTGCCTGGGCTA-TCGCCCGGACGTTCAGGCAAAAGTAAGGTCAGGTTGTAGATGCTCCAAAGTCGCGCAATTAGT
ATGCGCGGAGTGATCTGGATCCAAACAGAGTT------------------------------------------------
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---TATTCTATTCTATAGATTGATCGACCGTTTGACAAACGATAGCCGCGCGCGTCGGTACGTGCCGCACTATCAGCTAG
CTAGATCCGCTATGTGCG-------GAGCAGTAAACTAGA--------------GCAGACTCATCGTTCATGGC--TGGC
TCCGTCGTGAAGCGGCCATCAACGAGAATCCCGGCACGCTCATCGGATTCGGGTCTA-----------------------
------------------------------------------------------------------CTCTGCTCGCCGTA
TATAACCAGCAAGCAATGGCACCTC---GATGCA-------C-----CACA-----GGTCCACAGCACTGGCCAGTCCAA
AATGTGGCAACCAAAATACCTCATCCTCGTCGCGGTCTCGC------TCTCTGTCCTTGCATGCGCGGTGGTGGGAGACG
GTGGCGGCAGGCCACTGGTGACGGCCGTCACCAAGGACGCGGCCACCTCCCT-------CTACACCATCCCCGTCAAGTC
CGGCCGCCC------GCTGGTCCTCGACCTCTCCGGCCCCATCGTCTGGTCCACGTGCGCCGATGGCGCCCCCCATGACA
CGCTCGAGTGCAACAACATCGACTGCATGCGCGCGCACCGCTTCCACCCGCCCGGCTGCCCGCACACCGGCTACGGCATG
CCCGACGTCCACAACCCCTTCCGGTGCAAGTGCACGGCGCACCCGCACAACCCCGTCTCCGGCGACACCGCGTCGGGGAA
CATGACGCGCGTGGCGCTCTCCGCCAACGCCACCGACGGCATGAACCCGTTGGGCCCGGTGTCGTTCACCGCCGTGACGT
CCTGCGCGCCGAACACCCTGCTACAGGGGCTGCCGGCGGGGGCCGTGGGCGTGGTGGGGCTCGCG---------CGCTTC
AGCCTCGCGTTCCCAGCGCAGGTCGCGGGCACGCAGGGCGTCGCTAACTCGTTCGCGCTCTGCCTCCCTAGCAACCCAG-
--GCAACGGCGTCG---------CCATCTTCGGCGGTGGCCCGCTCTTCGTCCTG---GGGCAGCC------CATCTCGG
AGATGCTGGGCGGCAGCACCCCCCTCCGCAAGCACGGGGACTCCCCCGGCTACTACATCAGGGCCAGCAAGGGCATCACC
GTGGACGGACTGCGGATACTGCCGGGCGATCA------CGCACCGCTCACCATCGGCCTCTCCACGACGAC-------CC
CCTACACGGAGCTACGCAGCGACGTGTACCGCCTGTTCATCAACGCGTTCGACCAGGCGATGGAGCGCTGGGGTGCTGCC
GCTTT------GA---------------GGGTCCCCTCCCCGGCCGAGTCGCCGTTCGAGCTGTGCTACAACAATTCGAA
GCTGTCGCAGACGCGGTTCGGCTTCTTCGTGCCGAGGATCACCCTGATGCTGGACGGCGGCACGAGCTGGCAGGTGTTCG
GCATGAACTCCATTGTGCGGCTGAAC---CGCGCCACGGCGTGCTTAGCTTTCGTCGAGATGAAGGCGGGGAACAAGGCT
GGGT---ATGGCGGCGGTGCGGCGCCGGCGGTGGTCATCGGAGGGTTCCAGATGGAGAACATGCTGCTGGTGTTCGACGA
GGAGAAGCAGACGCTCGGATTCACCACCGGGCGGCACCTCATCACGGGGCTCTCCTGCGGCCACTTCAATTTTACGATGC
CCGCCTAGCCTACTGTTGCTTGGTCTAATTAGTGCGG------------TGTCATTTTGTTGCTTGGATTTCG--AATTT
CCGTGCGTCTATTTGACTAGTTTTTTCCCCTCA----TTTCCTGCAAACAACATTAACCCCA-GCACCAAAGTAAATTAC
ACACATCCAAGAACGTCGAGATCTGAGAAGTCAGAAGCCCACACAAAATTATTCCGTTGTACTTGGCTATTTGACTATTT
CCCATCCTATATAGAAGGGGAACTTTCGCTCTATGGGGACATATACACCCTATATGGGGAAAAAATTAGTAATTCAACAA
AAAGTCAAACAATTCTGAAAATATTTTTAAAATAAACTTGACCTTACATTGTACTTGTGAGAAAATTTTCACAAAAAGAA
AATTCCCCTTTGACTTCTTCTCAAAAAAGACAAAATTTTGGTCAAAATAGTGTGAATTGTGACCTATAATAGCAAATAAA
TTTTGTCTTTTCTGCTGTGAAGTCAACGTTGGTTTTTTTGGAAATTTATATACTAGTGCAAAAGTAAGTCCACTTTATTC
TAAAAAAACTTCTAAACTATTTTTGACTTCTTGTTTAATTATTAAAAAATATCCCCATATAGGGTGTATATACAACCAGG
AACCGAAGTGTATCTCCCATCCTGTATAGCACTATCAAACGGCCATGTAGGTTCCATAACCTTTCGTCGAAGAGGGTGTT
CGCAAAGTGTGTGTATGAATATCCCGATCAAAAAAAAGGTGTGTGTATGAATATGATATCCTCTCTCTTCTATGTCCCAT
CCCATAGAAAAGAAAAGGGAGATGGTACTCTACGTCAATGTACGGATTAAACTTACTGCCTCCTCATTTCCAATTAAATG
GTGCCAAATCAATTATCAAAGTGTTGTCCTGAAATTTCAAGACTA------------------------TTATACAGTTG
GATAGGGTTCGAGATGTTCTTTCGGCTGAAGCTCTGGCTCTGAAACATGTTTTGCTCTTAGGAGAATCCATGGGTTGCAA
TAGAGTTGTTG
>chr3B_1
TGTGGTACACAATTAACTCACTACTACATGGAATTTTCTCTTTTTTGTTTCTT----------AAAAAAACATACGAGTT
TTGAACTTTGCAGGACAACAAAACATTCGTACTACTATGTGGGTAAAAACTTTCAGATTTTTTCGTCCGACATAAATATA
CCCAAAGTGACAAAACATACGAACTTCAATCTGTAAGTTTTTTCCCACATTCTAGTTAGAATGTTATGTTGTCCTGCAAA
GTTTCAAGTTCATGTGTTGTTTTATTTGAAAGAAACAAAAAAGGCAAACGTTCTTGCACGAATCTTGATGAAGAAATGGA
TGGCTAGATAAGGGGGTGTTCCAAAGCCTGTGCTTTCTCAAAAGTTAACCGGAAATGGGGGCGGCTAGGGTATCCCTTGT
CATCCATCTTAAATAGCCGGATTTGGCCCTCAGATCGCAATG-CGAAGAGGCGACATGAATGCGTCCTCACTAAACCGTT
GAACTCCCCCGCAAACCGCTGAGTTTTTGCATGAGCCTATCCTTCAGTTCGATGTGGCGAACATGTCGGTACGATCCTAT
GTCTGCCCCATGTGTGAGCTTAATATGAGAGGGGCCGGACAACCTAGATACTTGGTCGTATTTGTGACGTTCTTGATGCA
GGCGTTGGCTGGGCTTTTCGCCCGGACGTTTAGGCAAAAATAAGGTCAGGTTGTAGATGCTTTAAAGTCGGGCAATTA-T
ATGCGCGGAGAGATCTGGATCCAAAAAGAGTT------------------------------------------------
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---TATTCTA-----TAGATTGATCGACCGTTTGACAAACGATAGCCGCGCGCGTC------TGCCACATTATCAGCTAG
CTAGATCCGCTATGTACG-------GAGCAGTAAACTAG----------CTAGCGCAGACTCATCGTTCATGCC--TGGC
TCCGTCGTGAAGCGGCCGCCAACGAGAATCCCGGCACGCTCATCGGATTCGGGTCTA-----------------------
------------------------------------------------------------------CTCTGCTCGCCGTA
TATAACGAGCAAGCAATGGCACCTC---GATGCACCACAGCC-----CACA-----GGTCCACAGCACTGGCCAGTCCAA
AATGTGGCAACCAAAATACCTCATCCTCGTCGCGGTCTCGC------TCTCTGTGCTTGCATGCACGGTGGTGGGCGACG
GCGGCGGCAGGCCACTGGTGACGGCCGTCACCAAGGACACGGCCACCTCCCT-------CTACGCCATCCCCGTCAAGTC
GGGCCGTCC------GCTGGTCCTCGACCTCTCTGACCCCATCGTCTGGTCCACCTGCGACGACGGCGCCGTCCATGACA
CGCTCGAGTGCAACAACATCGACTGCATGCGCGTGCACCGCTTCCACCCGCCCAGCTGCCCGCACACCGGCTACGGCATG
CCCGACGTCCAAAACCC---CCGCTGCAAGTGCACAGCGCACCCGCACAACCCCGTCTCCGGCGACACAGCATCGGGGGA
CATGACCCGAGTAGCGCTCTCAGCCAACGCCACCGACGGCATGAACCCGTAGGGCCCGGTGTCGTTCACTGCCGTGACAT
CCTGTGCGCCGGATACCCTGCTACAGGGTCTGCCGGCTGGGGCCGTGGGAGTGGCGGGGCTCGCG---------CGGTCG
AGCCTCGCATTCCCGGCGCAGGTCGCGGGCACGCAGGGAGTCGCTAACTCGTTCGCGCTCTGCCTCTCGAGCGGCCCTG-
--GCAGCGGCGTCG---------CCATCTTCGGCGGCGGCCCGCTCTTCGTCCTG---GGGCAGCC------CATCTCGG
AGATGCTGGGCGGCAGCACACCCCTCCGCAAGTACAAGGACTCCCCTGGCTACTACATCATCGCCAGCAAGGGCATCGCC
GTGGACGGAGTGCGGATCCTGCCGGGCGAGCA------CGCACCGCTCACCATCGGCCTCTCCACGACGACGGACGACCC
CCTACACGGAGCTGTGCAGTGACGTGTACCGCCCGTTCATCAACGCGTTCGACCAGGCCATGGAGCGCTGGGGTGCTGCC
GCTTT------GA---------------GGGTCCCCTCGCCGGCCGCGCCGCCGTTCGAGCTGTGCTACAACAATTCGAA
GCTGCCGCAGACGCGGTTCGGCTTCTTCGTGCCGAGGATCAGCCTGATTCTCGACGGCGGCACGAGCTGGCCGGTGTTCG
GCATGAACTCTGTGGTGCGGTTGAAC---CGCGCCACGGCGCGCTTGGCTTTCGTCGAGATGAAGGCCGGGAACAAGGCT
GGGTATTATGGCGACGGTGCGGCGCCGGCGGTGGTCATCGGAGGGTTGCAGATGGAGAACATGCTGCTGGTGTTCGACGA
GGAGAAGCAGACGCTCGGATTCACCGCCGGGCAGCACCTCATCAATGGGCTCTCCTGCGGCCACTTCAATTTTACGATGC
CCGCCTAGCCTACTGTTG--------------CGTGGTCTAATTAATATTGTCATTGTGTTGCATGGATTTCGAAAATTT
CCGTGCGTCTATTTGACTAGTTTTTTCCCCTCGTTTTTTTCCTGCAAACAACGTCAACCCCATGCACCAAAATAAATTAC
ACACACCCAAGCACGTCGAGATCTGACAAGTCAGAAGCTCACACAAAATTATTCCGTTGTACTTGGGTATTTGACTATTT
CGCATCCTGTATA-------------------------------------------------------------------
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----------------------------GCACTGTCAAACCACCATGTAGATTCCATCACCTTTCGTCAGAGAGAGTGTT
CGCAAGGTGTGTGTATGAC--------------------------------TATGATATTCTCTCTCTTCTATGTCCCAT
CCCATAAAAAAGAAAAGGGAGGTGGTACCCGACGTCAATGTACGGATTAAACTTACTGCCTCCTCATTTCCAATTAAATG
GTGCCAAATCAACTATCCAAGTGTTGTCCTGAAACTTCAAGACTACTCCCTCCGTCCCATAATGTAAGATTATACAGTTG
CGTAGGGTTCGAGATGTTCTTTCGGCTGATGCTGTGGCTCCAAAACATGGTTTGCTCTTAGGAGAATTCATGGGTTGCAA
TAGAGTTGTTG
>chr3A_428
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--------------------------------------CATGCCGAAGAGGCGACATGAATGCGTCCTCACTAAACCGTT
GAACTCCCCCACAAACCGTTGAGTTTTCGCATGAGCCTATTCTTCAGTCCGATGTGGCGAACATGTTCGGACAATCCTAT
ATCTACCCCATGATTGAGCGAAATATGAGATGTGCGGGACAACCTAGATGCTTGGTCGGATTCGTGACGTTTTTTATGCA
GGCGTTGCCTGGGCTTTTCGCTCGGACGTTCAGGCAAAAGTAAGGTCAGGTTGTAGATGCTCTAAAGTTGGGCAATTA-T
ATGCGCGGAGAGATCTGGATCCAAAAGGAGTTAAATACATCTACGGTACACCAACTTGCAATGCGGGAACAATTTCATAC
AACAACTTGAATTGAGACAAATGGGTCACTAAACTTGCACTGCCGAATCAATTTCATACAAAATACTAGAGAGCCACGCC
GCACGCCACGTTGGCAGGGGAGCACGCCCCGGTGGGCTGGTTAGTTTGCACGAAACCCCCTGAGTAATGAAAACACTAAA
CCCGCAGTCCTGGTTACGAATGGGGAGGGAGAAAAGTTTGTGGCGAACAATATAGTTATGCGAACAGTCACATTGACACC
GGTAACCCTCCCCAAACCCGTTCGTCTCTTCATCTTCGCCGTCGCATGTTCGTTTTCTCTGTTGGACACAGAACAGACAG
AGGGATTGCATCGCCCTCGTCGTGGTGATCTACACTGGATGGATCCACGTCCTCGCGGCATCGGCGAATTTCCTCCGGAT
TACGGTACGAATTTCGCTCTCTCTGTTCCCTTGTCTGGTCGTGTTCTGCTAGGGTTTTCATGGGTTGTGATCGGTGTTAT
TTGCGCCTGCTGGATAGATGAAAGAGTGGGCATTTGGGGGGCGTATGCTTCAGATTCGATTTTTGATTAGATTAGACATA
GATGTACTGTGTTGTCATGCATTGTGGTGTCGCTTGCTTTGTTCAAAAAATTTGTTTCCTGCAATATTAAGCATGGGATT
CAGATTGATGCAGTTAAATAGGCTGTAGGTAAGACGAATTGATGCAGTTTAATCTGTTCAAATCAGTTTCAGAATGTGAA
TTATTGTACTGTAGTTTGATATATGTTCAGAATTGAGTTACAGAGCATACTATAGTGTACTACTGATATATGTTCAGAAT
TGAGTGACAGAACATACTGTAGCGTACTTACTGATATATGTTCAGAATTGAGTGGTTTAAATTACCTTTTTTTAGAACGA
TTTAAATTACCTTTGATGTAGTTTGTTAGGAACAATGCTTGATATATGCTTGGGTGCAGATTTGGAAGTGCTGTATTACT
GATATATGCTTGATATATTTGTGTACTTCTACTTGCAGGAGAAAATTCCAATTTCTTTACATCAGTGTTTGAACATAATG
GTATATTTTGTGGGCTGGATGATAGAAGGACATTTTGGGGAAGCACTCAAGAAGAATATGACTATTGTGATGCCAACACA
TGGTCAAGAGATGTAATTAATTACATATTGCAGCATTTGGGATATGACATTACTAGTCCTGAGCTACAAGTTTATTGGTG
CTTGCCTGGGAAGGACATCCTGGATGGCATGATCTGTTTAGATAATGAACAAGCAATAGCTTCAATGGCAATGGCAGGCA
GAGAGAACAGAAGCTTGCATGTTTTAGTAGATGAGAGAAATCATGTGAAATCAGCAAAATATGCATATACAGAGGTTACC
CTGAGCTTCCAAGGGTAATGGTCCATCTAGAACATGAAGAGGAAGAGCAGGAAGAGGATGCCTGCGATCATAGGGGCACA
ATACAATGCCTATGAGAGACAAGGATCACTGGGAACAAGTCAATGGAACTGTCATTCATCCACCAGTTTACAAGAAAAAG
ATGCGAAGGCCACCAAAGAATAGGAAGAAAACACCTGAAGAAAAGCTTCAGAAGGATGGCAACATTGCACTGAACAAGAA
AGGTGTGAGCATGCACTGCTCAATTTGTGGAAAAGCATATCACAACAAGAAAGGCCATCAGAAATTCATGGAGAGGGAGA
TGGAGAGGGAAGCAACTGACATGGAAGAAGAAATAGAAGATCCTTCCATTTTAAATGTAAGACATTTAATTTCTAGTTGC
AATACACGTTAGTCCATTTTCACACCATCTTATATTGCAGGACATCAGGACACACATGGAGGACATGAGGCTGGATCCTA
TGCACGTGCCTTTCAGCATGGTACATAGAATGAGGCAAGAGGTGACAAATAGTTGTATACTGTTTCCTATGATTTCATAT
CCATGTAATTACTTTTAGTGACTTATGAATGCTTTGTCTACATATTGATCAGGAGAGAGTCCATGTTTCAAATGTTAGGA
CACCTGGTCCTCTGCCAGATATATCTAGATTTGTAGCCGATGCAAGGGACTCCATTCCTGAGAGAAGAACAAATACTACT
GCTACAGCCAGGGGAAGGAACAGGGGAAAAGGCAAAGAAACTGCAGTAGATGGCGGAGAAACTAGTGGTGCTGCAAGCAA
GAGACATAAAAGAGGTGGAGGAAATGCTAGTGCAAGAGGGGGAGGAAAGGCTGCTAGAGGTGGAGGAAGTGGTGGTGCAA
GAGGGGAAGGAAATGTTGCAAGAGGTGGAGGAAGTGGTGGTGCTAGAGGGGGAGCAAGTGCTGCTGCAAGAGGTGGTAGA
AATGCTGGAAGAAGGGGAGCAAGTGTTGCTGGAAGATGGGGAGCAAATGCTGGAAGAGGGGGAGCAAATGGCTGGAACTT
TCTTTTCTTTGGAGCAGATGGTGACAACTGACAAGAGAGATGCATCTATTCCAGACCTAAATGCAAATCCTGAAGAGATC
ATTGTGACCATGCGCCAACTCGTTAATCATGCATGTTTTAAGTGCTATCTTAGCAAAGTTCGTCGATGAACAAGCTACAC
ATGTCGTAGTTCATGTGTGAACTTTGAAGGCTACTTATTTTGTAATCTTCTAAACCCTGAATGTTGCTGAGTTGGTACTA
CTATGTTCTGAACCTGCTATGTTATGAATGCATACATGCTATTCTTAACCAGTTCCAAATGTTCTGAATATTCTGAACCT
GCTATGTTATGAATGCATATATATACTTCATCCTTTATTATCCTTAGGAGGACTGCCTCCTCTCTCTCTCTCGCCCAAGT
GCGGAAGAGCACGACGCCGCCGTCCGTACGCTGGATCGGCCACCGTGTTCCCGTCCAGTGCGCATGACACTGAGGCAAGC
GGTGCACCCGATGTGGTCAACGAGTAGGTGGCTGTGGTCGTCCATGCTCTTTTTTATTATCTTCTCCTTTTGCTGTCAGT
TAAGCAATCTTAGATTCAATTTCGGTTTCAGTTAAGAAATTTGTATGCGTTTAGTTATTCTAACATATCAGGAGACTTTT
GTGCAAATAATCAGGACTGCGGGTTTAGTGTTTTCATTACTCAGGGGGTTTCGTGCAAACTAACCAGCCCACCGGGGCGT
GCTCCCCTGCCAACGTGGCGTGCGACGTGGCTGTCTCGGAGTATTTTGTATGAAATTGATTCCGCATTACAACTTTAGTG
ACCCATTTGTCTCAATTTTCAAGTTATTGTATGAATTTGTTCCCGCAGTGCAAGTTAGTGTACTGTAGGTGTATTTAACT
CTTTATTCTA-----TAGATTGATCGACCGTTTGACAAACGATAGCCGCGC------------GCCACATTATCAGCTAG
CTAGATCCGCTATGTACG-------GAGCAGTAAACTAG----------C----GCAGACTCATCGTTCATGGC--TGGC
TCCGTCGTGAAGCGGCCATCAACGAGAATCCCGGCACGCTCATCGGATTCGGGTCTA-----------------------
------------------------------------------------------------------CTCTGCTCGACGTA
TATAACGAGCAAGCAATGGCACCTC---GATCCA-------C-----CACA-----GGTCCACGGCCCTGGCCAGTCCAA
AATGTGGCAACCAAAATGCCTCATCCTCGTCGCGGTCTCTC------TCTCTGTGCTTGCATGCACGGCGGCGGGCGACG
GCGGCGGCAGGTCACTGGTGACGGCCGTCACCAAGGACGCGACCACCTCCCT-------CTACACCATCCCCGTCAAGTC
CGGCCGCCC------GCTGGTCCTCGACCTCTCCGGCCCCATCGTCTGGTCCACCTGCGACGACGGCGCCCCCCACGACA
CGCTCGAGTGCAACAACATCGACTGCATGTGCGCGCACCGCTTCCACCCGCCCAGCTGCCCGCACACCGGCTACGGCATG
CCCGACGTCCACAACCCCTACCGCTGCAAGTGCACCCCGCACCCGCACAACTCCGTCTCCGGCGACACCGCCTCGGGGGA
CATGACGCGCGTGGCGCTCTCCGCCAACGCCACCGACGGCATGAACCCGTTGGGCCCGGTGTCGTTCACCGCCGTGACGT
CCTGCGCGCCCGACACCCTGCTACAGGGTCTGCCGGTGGGGGCCGTAGGCGTGGCGGGGCTCGCG---------CGCTCC
AGCTTCGCGTT---------------------------------------------------------------------
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>chr3D_702
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ATGCGCGGAGAGATCTGGATCCAAGCAGAGTT------------------------------------------------
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---TCTTCTATAGTTTGA--TGATCGATCATTTGACCATAATTATCACTATGGCATGGA--GTGCCACACCATCAGTTAG
CTAGATCCACTATGTACGCCACCCGGATCAATAAACTAGTGCATATCATC----GCGGACTCATCGCTCTAGCTCATGGC
TCCGTCGTGTGGCAGCCATCAACGAGAATCCCGGCACGCTCATCGGGTCTACTCTCTAA-CTTCCACTTCCAGCGAAAAA
CTTGGTTAGAAAACCAGCAAACATTA---TCTCTCACGTACACACTA--TCGATCTAGTCACCGTGCTCTGCGCGCGGTA
TATAACAAGCTAACAATGGCACCTC---GATCGA-------C-----CACAACACAGCACTGCCCAGTCCAAAT-TTCAA
AATGTGGCAAACGAAAGACCTCATCCTCGTCGCCGTCTCGC------TCTGTGTGCTTGCGAGCACGGTGGCGGGCGACG
GCGGCGGCAGGCCCCTGGTGACGGCCGTCACAAGGGACGCCGCCACCTCCCT-------CTACACCATCCCCGTCAAGTC
CGGCAGCCC------GCTGGTCCTCGACCTCTCCGGCCCCATGGTCTGGTCCACCTGCGACGACGGCGCCTCCCACGACA
CGCTCGAGTGCAACAGCATCGACTGCATGCGCGCGCACCGCTTCCACCCGCCCAACTGCCAGCATACCGGCTACGGCATG
CCCGACCCCGGCAACCCCTACCGCTGCAAGTGCACCGCGCACCCGCACAACCCCGTCTCGGGCGGCACCGCGTCAGCGGA
CATGACGCGCGTCACGCTCTCCGCCAACGCCACCGACGGCAGGAACCCTTTGGGCCCGGTGTCGTTCACCGCCGTGACGT
CCTGCGCGCCGGACTCCCTGTTAGCGGGGCTGCCGGCGGGGGCCGTCGGCGTCGCGGGGCTCGCA---------CGCTCC
GGCCTCGCGTTCCCCGCTCAGGTCGCGCGTACGCAGGGCGTCGCCAACTCGTTCGCGCTCTGCCTCGGGAACCGCGAAC-
--GCGACGGCGTCG---------CCATCTTCGGCGGGGGCCCGCTCTTCGCGGCGAACGGGCGGTC------CATCACGG
AGATGCTGGGCGGCGACACCCCGCTCCGCAAGCACGGGGAATCCCCCGGCTACTACGTCTCGGCCAGCCGGGGCGTCTTC
GTCGACGGAGTGAAGGTGCCCCTGGACACGTA------CGCACCGCTCACCATTGGCTTCTCCACGACGAC-------CC
CGTACGCGCTGGTACGCCGCGACGTGTACCGCCCGCTCATCGACGCGTTCGACCAGGCCATGGAACGCGACGGTGCGATT
ACCGCCGGAGCGA---------------GGGTCCCCTCCCCGGCCGGGTCGCCGTTCGAGCTGTGCTACAACTCTTCGAG
GCTGTCACTGACGCGGTTCGGCTACTTCGTGCCGACGGTTGGCTTTGGGCTGGAGGGCGGCTCGGGCTGGGCGGTGCAGG
GCATCAACTCCATGGCGCTGGTGATCGGACGCCCGACGGCGTGCTTCGGTTTCGTGGAGATGAAGGAGGGGGACAAGGCC
GGCTAT---GGCGGCGGTCCGGCGCCGGCGGTGGTGCTCGGAGGGTTGCAGATGGAGGAGAACCTTGTGGTGTTCAACGA
GGAGAAGCAGACGATGGCCTTCACCGGGCAGATCAACGGCAG---AGGGCTCTTCTGCAGCAACTTCAATTTTACCGTGC
CCGCCTAG------------------------------------------------------------------------
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>chr3B_882
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-------------GGCCATCAACGAGAATCCCGGCACGCTCATCGGGTCTACTCTCTACTCTTCCACTTCCTGCCAAAAA
CTTGGTTAGAAAACCAGCAAACATCATCGTCTCTCACGTACACACACTGTCGATCTAGCCACAGTGCTCCGCGCGCGGTA
TATAAGGAGCTAGCAATGGCACCTGCTGGATCGA-------CCACAGCACA-----GCACAGGCCAGTCCAAAT-TCCAA
AATGTGGCAACCAAAGGACCTCGTCCTCGTCGCCATCTCGC------TCTGTGTGCTTGCATGCACGGTGGCGGGCGACG
GCGGCGGCAGGCCGCTCGTGACGGCCGTCACAAGGGATGCCG-CACCTCCCT-------CTACACCATCCCCGTCAAGTC
CAGCCGCCCGCTGCCGCTGGTCCTCGACCTCTCCGGCCCCATCGTCTGGTCCACCTGCGACGGCGGCGCCTCCCACGACA
CGCTCGAGTGCAACAACATGGACTGCATGCGCGCGCACCGCTTCCATCCGCCCAACTGCCAGCATACCGGCTACGGCATG
CCGGACGCCCACAACCCCTACCGCTGCAAGTGCACCGCGCACCCGCACAACCCCGTCTCCGGCGACACCGCGTCAGGGGA
CATGACGCGCGTCACGCTCTCCGCCAACGCCACCGACGGAAGGAACCCGTTGGGCCCGGTGTCGTTCACCGCCGTGACGT
CCTGCGCGCTGGACTCCTTGTTAGCGGGGCTGCCGGTGGGGGCCGTCGGCGTCGCGGGGCTCGCG---------CGCTCC
GGCCTCGCCTTCCCCGCTCAGGTCTCGCGCACGCAGGGCGTCGCTAACTCGTTCGCGCTCTGCCTCCCAAGCGGCCAAG-
--GAAACGGCGTCG---------CCATCTTCGGCGGTGGCCCGCTCTTCGCGGCGAATGGGCGGTC------CATCACGG
AGTTGCTTGGCAGCAGGACCCCGCTCCGCAAGCACGGGGAATCCCCCGGCTACTACATCTCGGCCAGCAGGGGCATCGCC
GTGGACGGAGCGCGGGTGCCGCTGGACTCGTA------CGCACCTCTCACCATTGGCTTCTCCACGACGAT-------CC
CGTACGCGGAGCTCCGCCACGACGTGTACCGCCCGCTCATCAACGCGTTCGACCAGGCCATGGAACGCCAGGGTGCGATT
ACTACCGGTGCGA---------------GGGTCCCCTCACCGGCTGCGGCGCCGTTCGAGCTGTGCTACAACTCGTCCAG
GCTTTCGCCGACGCGGTTCGGCTACTTTGTGCCAACGGTCGAGCTGATGCTGGAAGGCGGCAGGAACTGGACGGTGTTCG
GCATCAACTCCATGGCGCAGGTGAAC---CGCGCCACGGCGTGCTTCGCTTTCGTCGAGATGAAGGCGGGGGACAAGTCC
TGGTAT---GGCGGCGTTGCCGCGCCGGCCGTGGTGCTCGGAGGGTTTCAGATGCAGCAGAACCTGCTAATGTTCGACGA
GGAGAAGCAGACGCTCGGGTTCACCGGGCAGCTGACTGGCAG---GGGGCTCTCGTGCGGCCATTTCAATTTTACGATGC
CCGCGTAACCTGGTGTTGCAAGTTCAAA------TGC------------TGTGGTCGTGTTGCCTGGATTTCG--AATTT
CCTCGCGTCTACCTAACACGTTTTTTCCACTCCTTTTCCCGCGAACAAAAT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>chr3B_926
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------CTCCGCGCGCCATA
TATAACGAGCTAGCAATGGCATCTC---GATCGA-------C-----CACA-----GCATTGGCCTGTCCAAAT-TTCAA
AATGTGGCAACCAAAAGACCTCCTCCTCATCGTCGTCTCGCTG------TGTATCCTGGCGTGCACGGTGGCGGGCGACG
GCGGCGGCAGGCCGCTGGTGACGGCCGTCAGAAGGGACGCGGCCACCTCCCT-------CTACAGCATCCCCGTCAATTC
CGGCCGCCC------GCTGGTCCTCGACCTCTCCGGCCCCATCGTCTGGTCCACCTGCGACGACTGCGCCTCCCACGACA
CGCTCGAGTACAACGACATCAACTGCATGCGCGCTCACCGCTTCCACCCGCCCAACTGCCAGCATAACGGCTACGGCATG
CCCGACGCGCACAACCCCTACCGCTGCAAGTGCACCGCGCACCCGCACAACCCCGTCTCCGGCGACACCGCGTCGGGGGA
CATGACCCGCGTGGTGCTCTCTGCCAACGCCACCGATGGCAGAAACCCTTTGGGCCCGGTGTCGTTCACCGCCGTGACGT
CCTGCGCGCCGGATTCCCTGTTAGCGGGGCTGCCGGCGGGGGCCGTCGGCGTCGCGGGGCTCGCG---------CGCTCC
GGCCTCGCGTTTCCCGCTCAGGTCGCGCGCACGCAGGGCGTGGCTAACTCGTTCGCGCTCTGCCTCGGGAACGGCGAAC-
--GCGACGGCGTCGCCATCTGGCCCATCTTCGGCGGGGGCCCGCTCTTCGCGGCGAACGGGCGGTC------CATCACGG
ACATGCTGCGCGGCGACACCCCGCTACGCAAGCACGGGGAATACCCCGGCTACTACGTCTCGGCCAGCAGGGGCGTCTTC
GTCGACGGAGCGAAGGTGCCGCTGGACACGTA------CGCACCGCTCACCATTGGCTTCTCCACGACGAC-------CC
CGTACGCGCTGGTGCGCCGCGACGTGTACCGCCCGCTCATCGACGCGTTCGACCAGGCCATGGAACGCGACGGTGC----
-----------GATTACCGCCGGGGCGAGGCTCTCCTCCCCGGCTGGGTCGCCGTTCGAGCTGTGCTACAACTCTTCGAG
GCTGTCACTGACGCGGTTCGGCTACTTCGTGCCGACGGTCGGCTTTGGGCTGGAGGGTGGCACGGGCTGGGCAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>chr3A_926
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------CTCTGTGCGCGGTA
TATAACGAGCTACCAATGGCACCTC---GATCAA-------CCACAGCACA-----GCACTGGCCTGTCCAAAT-TCCAA
AATGTGGCAAACAGAAGACCTCATCCTCGTCGCCGTCTCGCTCTCTGTCTCTGTCCTGGCGTGCACGGTGGCGGGCGACG
GCGGTGGCAGGCCGCTGGTGACGGCCGTCACAAGGGACGCGGCCACCTCCCT-------CTACACCATCCCCGTCAAGTC
CGGCAGCCCG------CTGGTCGTCGACCTCTCCGGCCCCATCGTCTGGTCCACCTGCGACGACGCCGCCTCCCACGACA
CGCTCGAGTGCAACAGCATCGACTGCATGCGCGCGCACCGCTTCCACCCGCCCAACTGCCAGCATACCGGCTACGGCATG
CCCGACCCCGGCAACCCCTACCGCTGCAAATGCACCACGCACCCGCACAACCCCGTCTCCGGCGACACTGCGTCGGGGGA
CATGACCCGCGTGGTGCTCTCCGCCAACGCCACCGACGGCAGGAACCCGTTGGGCCCGGTGTCGTTCACCGCCGTGACGT
CCTGCGCGCCGGACTCCCTGTTAGCGGGGCTGCCGGCGGGGGCCGTCGGAGTCGCGGGGCTCGCG---------CGCTCG
GGCCTCTCGTTCCCCGCTCAGGTCGCGCGCACGCAAGGCGTC-CTAACTCGTTCGCGCTCTGCCTCCCAAGCGGCCCAG-
--GAAACGGCGTCG---------CCATCTTCGGCGGTGGCCCGCTCATCGCGGCGAATGGGCGGCC------ACTGACGG
AGATGCTGGTCGGCGAGACCCCCCTTCGCAAGCACAAGGAATCCCCCGGCTACTACATCTCGGCGAGCAAGGGCATCGCC
GTGGACGGAGCGCAGGTGCCGGTGGGCCAGTA------CGCACCGCTCACCATCGGCCTTTCCACGACTAT-------CC
CCTACGCGGAGCTGCGCCGGGACGTGTATCGTCCGCTCATCAACGCGTTCGACCAGGCGATGGAACGCCAGGGTGG----
-----------GA---------------GGGTCCCCTCCCCGGCTGCGGCGCCGTTCGAGCTGTGGTACAACTCGTCCAG
GCTTTCGCCGACGCGGTTCGGCTACTTCGTGCCAACGGTCGATCTGATGCTGGAAGGGGGCAGGAACTGGACGGTGTTCG
GCATCAACTCCATGGCACAGGTGAAC---CGCGCCACAGCGTGCTTCGCTTTCGTCGAGATGAAGACGGGGGACAAGTCC
GAGTAT---GGCGGCCTTGCGCCGCCGGCGGTGGTACTCGGAGGGTTCCAGATGCAGCAGAACCTGCTGGTGTTCGACGA
GGAGAAGCAGACTCTCGGATTCACCTCGCAGCTCACCGGAAG---GGGGCTCTCGTGCGGCCAATTCAATTTTACGATGT
CTGCCTAACCTGGTGTTGCAAGTTCAAA------TGC------------TGTGGTCGTGTTGCCTGGATTTCG--AATTT
CCGTGCGTCTATCTAACTAGTTTTTTCC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>chr3A_926
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CTCCGCGCGCCATA
TATAACGAGCTAGCAATGGCATCTC---GATCGA-------C-----CACA-----GCACTGGCCTGTCCAAAT-TTCAA
AATGTGGCAACCAAAAGACCTCCTCCTCATCGCCGTCTCGCTG------TGTATCCTGGCGTGCACGGTGGCGGGCGACG
GCGGCGGCAGGCCGCTGGTGACGGCCGTCACAAGGGACGCGGCCACCTCCCTGCTCCCTCTACACCATCCCCTTCATGTC
CGGCAGCCCG------CTGGTCCTCGACCTCTCCGGCCCCATCGTCTGGTCCACCTGCGACGGCGGCGCCTCCCACGACA
CGCTCGAGTGCAACGACATCGACTGCATGCGCGCGCACCGCTTCCACCCGCCCAACTGCCCGCACACCGGCTACGGCATG
CCGGACGCCGACAACCCTTATCGCTGCAAGTGCACCGCACACCCGCACAACCCCGTCTCCGAGGACACCGCGTCGGGGGA
CATGACCCGCGTGGCGCTCTCCGCCAACGCCACCGACGGCAGGAACCCGTTGGGCCCGGTATCGTTCACCGCCGTGGCGT
CTTGCGCGCCGGACTCCCTGTTAGCGGGGCTGCCGGCGGGGGCTGTCGGCGTCGCGGGGCTCGCG---------CACTCA
GGCCTCGCGTTCCTCGCTCAGGCCGCGCGCACGCAGGGCGTCGCTAACTCGTTCGCGCTCTGCCTCGGGAGCCGCGGCC-
--GTGGCGGCGTCG---------CCATCTTCGGCGGGGGCCCGCTCTTCGCGGCGAACGGGCGGTC------CATCACGG
ACATGCTGGGCGGCGACACCCCGCTCCGCAAGCACGGGGATTCCCCCGGCTACTACGTCTCGGCCAGCAGGGGCGTCTTC
GTTGACGGAGCGCAGGTGCCGCTGGACACGTA------CGCACCGCTCACCATCGGCTTCTCCACGACGAC-------CC
CGTACGCGCAGGTGCGCCACGACGTGTACCGCCCGCTCATCGACGCGTTCGACCGGGCCATGGAACGCGAGGGTGCGATA
ACCGCCGGTGCGA---------------GGGTCCCCTCCCCGGCCGGGTCGCCGTTCGAGCTGTGCTACAACTCTTCGAG
GCTGTCACTGACGCGGTTCGGCTACTTCGTGCCGACGGTCGGCTTTGGGCTGGAGGGCGGCTCGGGCTGGGCGGTGCAGG
GCATCAACTCCATGGCGCTGGTGATCGGACGCCCCACGGCGTGCTTCGGTTTCGTGGAGATGAAGGAGGGAGACAATGCC
GGGTAT---GGCGGCGGTGCGGCGCCAGCGGTGGTGCTCGGAGGGTTGCAGATGGAGGAGAACCTGGTGGTGTTCAACGA
AGAGAAGCAGACCATGGCCTTCACCGGGCAGATCAACGGGAG---GGGGCTCTTCTGCAGCAACTTCAATTTTACCGTGC
CCGCCTAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>chr3D_1063
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------GGCGGCAGGCG
GCGGCGGCATGCCGCTGGTCACCGCGATCACCAAGGACGCGGCCACCTCGCT-------CTACACCGCGCCGCTCAGGGA
CAACCGCCC------GCTCGTCCTCGACCTCTCCGGCCCCATCGTCTGGACCACCTGCGACGGGC---CCTCCCATGACA
CGCTCGACTGCAGCAGCCACGCCTGCATGCGCGCGCACCGGTTCCAGCCGCCCAACTGCCCGCAGACCGGCTACGGCGAG
CCCGACGCCCGCA------ACCGCTGCAAGTGCACCGCGCACCCGCACAACCCCGTCTCCGGCGACACTGCGTCGGGGGA
CGTGACGCGCGTCACGCTCTCCGCCAACGCCACCGACGGGAAGAACCCTCTGTATGAGGTGTCCTTCACCGCCGTGGCAT
CCTGCGCGCCGGGCTCGCTCCTTGCGAAGCTGCCGGCGGGGGCGGCCGGCGTCGCGGGGCTCGCG---------CGCTCG
GACCTCGCGCTCCAGGCGCAGGTCGCGGACACGCAGAAGGTCGGTAGCAAGTTCGCGCTCTGCCTCCCGAGCGCCGGCTC
CGGCGCCGGCGTGG---------CCATCTTCGGCGGGGGCCCGCTCTTCCTCCTCCCGCCGGGCCGGACAGACGTCAACG
CGACCCTGGCAGGGTACACGCCGCTGCGCAAGCACGGCGAGTCCCCCGGGTACTACATCTCGGCCGACAAGGGCATCGCC
GTGAACCAGGCCCGGCTGCAGCTCGACGACGGGTACGGCGCGCCGTTGGTTCTCGGGCTGTGCTCCACGAT-------CC
CGTACACGGCGCTCCGGCCAGACGTGTACCGTGCGTTCATCAAGGCGTTCGATGCGACCACGGCGGAGA-----------
----------------------GGGCGAGGATCA---CGCCGGCGGTGGCACCGTTCGAGCTGTGCTACAACTCGACGCA
GCTGGGGTCGACGCGGCTGGGCTACGCCGTGCCGCAGATCGACCTGATGCTGGAGGGCGGCAGGAACTGGACGGTGTTCG
GCGGCAACTCCATGGTGCAGGTGAGCGA---CGACACGGCGTGCCTCGCCTTCGTGGAGATGAAGCAGGGGGAGGCGGAC
AAGCAGGGCGAGT---------CGCCGGCGGCGGTGATCGGAGGGTTCCAGATGGAGAACAACCTGGTGGTGTTCGACGA
GGAGAAGCAGCGGCTCGGCTTCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>chr3A_1063
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------GGCGGGAGACG
GTGGCAGCATGCCGCTGGTCACCGCGATCACCAAGGACGCGGCCACCTCCCT-------CTACACCGCGCCGCTCAAGGA
CACTCAGCCC------CTCGTCCTCGACCTCTCCGGCCCCATCGTCTGGACCACCTGCGACGGGC---CCTCCCATGACA
CGCTCGACTGCAGCAGCGACGCCTGCATGCGCGCGCACCGGTTCCAGCCGCCCAACTGCCCGCAGACCGGCTACGGCGAG
CCCGACGCCCGCAGCCGCAACCGCTGCAAGTGCACCACGCACCCGCACAACCCCGTCTCCGGCGACACCGCGTCGGGGGA
CGTGACGCGCGTCACGCTCTCCGCCAACGCCACCGACGGGAAGAATCCTCTGTATCAGGTGTCGTTCACCGCCGTGGCGT
CCTGCGCGCCGGGCTCGCTCCTGGCGAAGCTGCCGGCGGGGGCGGCCGGCGTCGCGGGCCTCGCGGGCCTCGCGCGCTCG
GGCCTCGCGCTCCCGGAGCAGGTCGCGGACACGCAGAGGGTCGGTAACAAGTTCGCGCTCTGCCTTCCCAGCGCCGGCTC
CGGCGCCGGCGTGG---------CCATCTTCGGCGGGGGCCCGCTCTTCCTCCTGCCGCCGGGCCGGCCAGACATCAACG
CGACCCTGGCCGGGTACACGCCGCTGCGCAAGCACGTCGAGTCCCCCGGGTACTACATCTCGGCCGACAAGGGCATCGCC
GTGAACCAGGCCCGGCTGCAGCTCGACGACGGGTACGGCGCGCCGTTGGTTCTCGGGCTGTGCTCCACGAT-------CC
CGTACACGGCGCTCCGGCCCGACGTATACCGTGCGTTCATCAAGGCGTTCAACACGGCCACGGCGGGGA-----------
----------------------GGGCGAGGATCA---CGCCGGCGGTGGCGCCGTTCGAGCTGTGCTACAACTCGACGGA
GCTGGGGTCGACGCGGCTGGGCTACGCCGTGCCGCAGATCGACCTGATGCTGGAGGGCGGCAAGAACTGGACGTTGTTCG
GCGGCAACTCGATGGTGCAGGTGAACGA---CAACACGGCGTGCCTCGCATTCGTGGAGATGAAGCAGGAGGAGGTGGAC
AAGCATGGCGGGT---------CGCCGGCGGCGGTGATCGGAGGGTTCCAGATGGAGAACAACCTGCTAGTGTTCGACGA
GGAGAAGCAGCGGCTCGGTTTCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>chr3A_1538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------GCGTTCCCCGCGCAGGTCGCGGGCACTCAGGGCGTGGCTAACTCGTTTGCGCTCTGCCTCTCGAGCAGCCCTG-
--GCAACGGCGTCG---------CCATCTTCGGAGGCGGCCCGCTCTTTGTCCTG---GGGCAGCC------CATCTCGG
AGATGCTGGGCAGCAACACCCACCTCCGCAAGTACAAGGACTCCCCCGGCTACTACATCATGGCCAGCAAGGGCATCACC
ATGGACGGAGTGCAGATCCTGCCGGGCGAGCA------CGCGCCGCTCACCATCGGCCTCTCCACGACGAC-------CC
CCTACACGGAGCTGCGCAGTGACGTGTACCGCCCATTCATCAACGTGTTCGACCAGGCTATGGAGTGCTGGGGTGCTGCC
GCTTT------GA---------------GGGTCCCCTTCCCGGCCGCGTCGCCGTTCGAGCTGTGCTACAACAATTCGAA
GCTGCCGCAGAAGCGGTTCGGCTTCTTCGTGCTGAGGATCAGCCTGATGCTGGATGGCGGCACAAGCTGGCCGGTGTTTG
GCATGAACTCTGTGGTGCGGTTGAAC---CGCGGCACGCCGTGCTTGGCTTTCGTCGAGATGAAGGCGGGGAACAAGGCC
GGGTAT---GGCGATGGTGCGGCGCCGGCGGTGGTGATCGGAAGTTTTCAGATGGAGAACATGCTGCTGGTTATCGACGA
GGAGAAGCAGACGCTCGGATTCACCACCGGGCAGCACCTCAACAATGGGCTCTCGTGCGGCCACTTCAATTTTACGATGC
CAGCCTAGCCTAGTGTTG--------------TGTGG------------TGTCATTGTGTTGCTTGGATTTCG--AATTT
CCGTGCTTCAATTTGACTGTTTTTTCCGTCATT----TTTTCCGCAGA------CAACCCTATGCGCCAAAATAAATTAC
ACACATCCAAGCACATCGAGATTTGAGAAGTCAGAAGCCTACACAAAATTATTCGGTTGTACTTGGCTATTTGACTATTT
CTCATCCTGTATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>SNPs
----S-------S---S----S--------S--------S--S---S-S-S--SSSSSSSSSS----S----------S-
-SS-------------------------S------S-------------------S-------S----------------
---------------------------------S-------------------------------S--------------
-------------S--------------------S--------S----S---------S---------------------
-----------------------------S------------S----------------------------S--------
-----------------------------SSS-SS--S------S----------S-------S-------------S--
--S--------------------------------------S----------------------------S---------
----S---SSSS----------------------S------S------------------------------------S-
---------------S----------------------------------------------S-------S-------S-
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------SS-S-------------------------------------------SSS-----S-------------
---------------S-----------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
------------------------------------------------------S----S---S----------------
-----------------------------------------------------S--------------------------
-------------------S---S-----------S------------------------------------------S-
--------------------------------------------------------------------------------
-----------S------------------------------------------S-----------------------S-
--------------S-----------------------------------------------------S----S------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---------S-------S-----------S--------------------------------------------------
---------------------------------S----------------------------------------------
----------------------------------------------S---------------------------------
-----------------------------------------S-----------------------------S--------
-------------S------S-------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------S-----------------------------------
-------------------SS-S--S--SSSS--S---------------------S-----------------------
--------------------------------S-------------------S-S----------------S--------
-----------S--------------------------------------------------------------------
-S------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------SS--------S------S----------SS----S-----
-----S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--------------------
------S--------------S------S-S-------------------------------------------------
------------S----S----------------S---------------------------------------------
SS---------------------------S---S------SS-------S-----------------S------------
-----------
>forward_464
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAAGAGGCGACGTGAATGCT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_5394
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TGTTCATCAACGCGTTCGAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_5261
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TCCCCCGGCTACTACATCAG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_6555
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GGTGTT
CGCAAAGTGTGTGT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
