>input_sequence_55697
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---------------------------------------------------------------------------ATGAG
---CGCCGCGGTGGTGACCAAGTCGACGCCGGTGCTGGTCGTCGGTCCGCCCGGCGGGGACGACGCCACCGTCCATCTCA
CCTCCTCCTTCGACAGGTCCGCAGTCCCTTTCAGGGTCACGGCGCTGCTCCTCTTCGACCGGTCGATCCCCCAGCCGGCG
GAGACCATCAGGACGGCAGTCTCCGAGGCGCTGGCCCACTACCGCCCCGTCGCCGGCCGTCTCGCTGCCGACGCCGACGG
CGATGGCGATC---TCCTGCGCATCGAGGGTGCGGCCGGCGTGCCTTTTGTCGCCGCGTCGGCGCGCTGCGCGCTGGCGG
ACGTCGCGGCGCCGCTGCTCGGCAGCCTCGCCGTGTGGTACCCGGGCGGGCTCTGCCGCCACGCCGACCCGCTGCTCCTG
GTGCAGGTCACCGAGTTCGCCTGCGGTGGGTTCGCCGTCGCGGCGACGTGGAACCACGTGCTGACCGACGGAGAGGGCAT
GGCGCAGTTCCTGGGGGCCGTCGGCGAGCTCGCGCGCGGGGCGTCGCCAGCGCCGTCCGTCCGGCCGCTCCGGGCCGACG
ACGACTCGCTCCCGCGCCTCCCCCAGTCATTGGTCGCGGCGCAGAAGCAGGCACTCAGCTGCGTATTCAACAGGGACTTC
GCGCTCCTCGACTTCACCGTACCCGCCGGCCTGATCGGCCGCGTCAGAGCCGACTTCGACGCCGCGGGCCTCGACGGC--
----GGGAAGCAACCCTGCACGGTATTCGAGGCCGTCTCGGCAGTGCTGTGGCAGTGCCGGACCCGTGCGGCCGTCGTCT
CCGTGTCCGACGAGGCCCCCGTGGCGCTGTCGTTCGCAGCCAACGTGCGCCGGCTCGTCGGCGCCAGGCCCGGGTACTAT
GGCAACTGCGCGGTGGTGCAGTCCGTGACCTCAACGCGCGGCCAGGTGGCGAATGGCGCCGTCGTGGATGTGGCGAGGAT
GATCCGGCGCGCGAAGGAGAGGATCCCGGATCTGCTTGTCCCCA---GTG---------GCACAACAACGGAACAGGGGG
CGATGGCGCTACCGTACCACACGCTGGTGCTGTCGTGCTGGAGGAACCTGGGGTTCGAGACGACGGACTTCGGCGGCGGG
AGGCCGGCGCGGGTGAC------CTGGCA------TGGGGAGGAGACGGTGGTGCCGGGCTGCGTCGTGTGCCCGCCGGG
CAAGGACGGCGACAAGGACGGGGTTAGCGTCATGTCGCTCTGCGTCAGGCCGGAGCATGCCGACGCCTTGCTAGCAGAGC
TCACCACAT--CAGCAGATCTAAAGTTGTAA-------------------------------------------------
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---
>chr3D_1_TraesCS3D01G074200
ACTTATGCCGAGCGCGCGTTTTTTCCGCCACCACCGGAGCGCCCCGAACGGATGCGCGCGCGCAAAAAACCTATTTTTTC
AGCGCGACGCTAATATCGTGCGCCTGTTGGAGATGCTCTAAGATCAAGTTAGCACGAAATTTAAAGACAAATAAGATCCA
ACAATTCTGAACTCAGATGTGAGGTAAGTATTTCACAACCAGATGTGAAATAGCAAACCCGTTTACCGTACACGACGAAG
CTAGCCGCGCAAATGTGCGGGCCACACTGCTTGTTTATACTCTCTTCGTTTCTTTTTAGTCCGCATATAAGGTTTGGTCA
AAGTCAAGCTTTGTAGAGTTTGACTAACTTTATATTAAAAAATATAAACATTCACAATATGAAATCAGTATTATCATATG
CACCATCGAATGTATTTTCATACTATAAGTTTTAGTATTGTAGATGTTCATATCGTTTTATATAAATTTACTGTGTAGTT
TGACTTTGACTAAATCTTATGTGTGGAGTAAAAAGAAATGGAATGAGTACAATACAATGAATACAGAGGTGAACAGTTCT
ATACGCCCACGGTCCAGCCTCGCCCGCCCGAATCCCCTCGACAGCCCAACGACCTCGATAACGGTCTACTTGTCACCCGA
TCGAGAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CTAAAACGCCAAACTCCCCCGAGGTATTTGCTCTCAAAACTTGAGTTGAC
GACGCCAATAGTACATGGAGGAATTTTGGACCAGTTCCACCCAGGAACATGTTAGCCTCGTTAGCTGCGCCCAACTTGAC
CAGTTTAGTAAGCATGCAGTAGCTGTTGTAGACGTGTAGTCGTGTAGAGGCAGGCGAATCTT-ACAAGTTGACACATATC
ACAGCACTAGGATTCTCTTTCTCACAAGCTAGCGCTGCACTTTGGCGCCACATCCCACATGCAACAAGGAAAGGC----T
TATATACACCTCCGTCACCGGCCGGCAACTTCAGCTCAGCGATCCATCCAT-------CTCTGCGGTATCCAACGATGAG
---CGCCGCGGTGGTGACCAAGTCGACGCCGGTGCTGGTCGTCGGTCCGCCCGGCGGGGACGACGCCACCGTCCATCTCA
CCTCCTCCTTCGACAGGTCCGCAGTCCCTTTCAGGGTCACGGCGCTGCTCCTCTTCGACCGGTCGATCCCCCAGCCGGCG
GAGACCATCAGGACGGCAGTCTCCGAGGCGCTGGCCCACTACCGCCCCGTCGCCGGCCGTCTCGCTGCCGACGCCGACGG
CGATGGCGATC---TCCTGCGCATCGAGGGTGCGGCCGGCGTGCCTTTTGTCGCCGCGTCGGCGCGCTGCGCGCTGGCGG
ACGTCGCGGCGCCGCTGCTCGGCAGCCTCGCCGTGTGGTACCCGGGCGGGCTCTGCCGCCACGCCGACCCGCTGCTCCTG
GTGCAGGTCACCGAGTTCGCCTGCGGTGGGTTCGCCGTCGCGGCGACGTGGAACCACGTGCTGACCGACGGAGAGGGCAT
GGCGCAGTTCCTGGGGGCCGTCGGCGAGCTCGCGCGCGGGGCGTCGCCAGCGCCGTCCGTCCGGCCGCTCCGGGCCGACG
ACGACTCGCTCCCGCGCCTCCCCCAGTCATTGGTCGCGGCGCAGAAGCAGGCACTCAGCTGCGTATTCAACAGGGACTTC
GCGCTCCTCGACTTCACCGTACCCGCCGGCCTGATCGGCCGCGTCAGAGCCGACTTCGACGCCGCGGGCCTCGACGGC--
----GGGAAGCAACCCTGCACGGTATTCGAGGCCGTCTCGGCAGTGCTGTGGCAGTGCCGGACCCGTGCGGCCGTCGTCT
CCGTGTCCGACGAGGCCCCCGTGGCGCTGTCGTTCGCAGCCAACGTGCGCCGGCTCGTCGGCGCCAGGCCCGGGTACTAT
GGCAACTGCGCGGTGGTGCAGTCCGTGACCTCAACGCGCGGCCAGGTGGCGAATGGCGCCGTCGTGGATGTGGCGAGGAT
GATCCGGCGCGCGAAGGAGAGGATCCCGGATCTGCTTGTCCCCA---GTG---------GCACAACAACGGAACAGGGGG
CGATGGCGCTACCGTACCACACGCTGGTGCTGTCGTGCTGGAGGAACCTGGGGTTCGAGACGACGGACTTCGGCGGCGGG
AGGCCGGCGCGGGTGAC------CTGGCA------TGGGGAGGAGACGGTGGTGCCGGGCTGCGTCGTGTGCCCGCCGGG
CAAGGACGGCGACAAGGACGGGGTTAGCGTCATGTCGCTCTGCGTCAGGCCGGAGCATGCCGACGCCTTGCTAGCAGAGC
TCACCACAT--CAGCAGATCTAAAGTTGTAAACTT------GTAAGTTGTAACAGTGGAAGTTCCATGGACCTGGGTTCG
ACCGAATGAGCAGCAATGCTTCCTTTTTGTGTGCAAACAGAGCACGTTTGTATTTCCGCACATTCTGAATGATTCAGTGA
TATGTCTGCGAAAGACTGTAGTATAATGATTTACAAAGTTGAATTTG---------------------------------
------TTTACCCACCACAAAGAGCAGGGCCGTCTCTAGAAATTCGAGGTCCCGGTGCGAAATTCAAATGGGGCCCTAAA
ATCTAAAAGTTCCTTACAACGAAAGCATCATCTCCCACTTAAATTATATAAATTTCATTATGTGTTATT-TGTACTATAT
TCCTAAAGACAAGGGCAACTATCTTCCTCAAACAATTCGACCCTAGAG------------------CTACTTCCTCTGTA
CTCCATGTTCAGTATTTATAAGACTAAGTTACAGTGGTTCTATTAATTAACCAAAGAATTGGTGCATATGTACACTATAC
TCACTAAATTACTGAACATGGAATGTATCCTAAAGTAAATTTGCTTTTGCTTGCGCACCTGATGGCCATTGACTGGCTGG
GGATGCCTAAATTAAAGCTCCTGATCATAGCGGCTGCCTTTTGCTCTGCTTTGCGGCATGTTCGCCCTTGCTGGCTTGGC
TGTTGCTGAATTTTGATTGAATTCATGGCGCGGCCGCCTGCCCTGTCCTTGCTATTGCGCCGCCGCCAAGAAGATCTGAT
CGAGTCGAGGAACATGCGAAGATTGGAAACGAAGCGAGGAGGTAACTTATTTTTTTTTGAGAGAGATAGCGAGGTAACTG
ATTAGCCCTAATCGGGGACAGAGTTCAACACGGCCCTTGCGAT--------------------------CAGACCAGGCC
GGTAGGCCCAAATCCATGCAAACAAAGGAAAATAAAAATCATAATAGTAAATATAGCCTTGGCCCAAAACTAGGT--CCC
TAAAATTTTTGGGCCCTGTGCAGTCGCACAGCCCGCACATGGCATTGGACCCCTGACAAAGAGGATATCGTGACTATCAA
TTA
>chr3B_83
--------------------------------------------------------------------------------
--CGCGGCGCTAATATCGCGTGCGTGTTGGAGATGCTCTAAGATCAAGTTAGCACGAAATTTAAAGACAAATAAGATCCA
ACAATTCTAAGCTCAGATGTGAGGTTACT-------------------------AAACCCGTTTACCATACACAACGAAG
CTAGCCGCGCAAATGTGCGGGCCACACTGCTTGTTTATAC----------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------AATGAACACAGTGGTGAACAGCTCT
ATACATCCACCGTCCAGCCCCGCCCGCCCGAATCCCCACGACAGCCCAACGACCTCGATAACGGTCTACTTGTCACCCGA
TCGAGAGCTAAGGCTTGTCGTAGTGGGAGTAACTTAGCTAGTAACATAGCGTACTCCAAAAATTTTTTGTTTATGTGGCA
AGTATTTAATGTGAGGTGGTAACATAATATGTTACTGTGACAACGCTTTTCAAGACAAGATGAGTCTACAAGCTAATAAA
TGAAGCCATCTATGACACTACTATTATGTTACTTTACATTATGAAGATAGTAACTTAGACTAGTATCATGCATATGACAC
TAGTCTAAGTTACTCCCCACTGTAACCAGCCTAAAACGCCAAACTCCCTCGAGGTATTTGCTATCAAAACTTGAGTTGAC
GACGCCAATAGTACATGGAGGAATTTTGGACCAGTTCCACCCAGGAACATGTTAGCATCGTTAGCTGCGCCCAACTTGAC
CACTTTAGTAAGCATGCAGTCGCTGTTGTAGACGTGTAGTCGTGTAGAGGCAGGCGAATCTT-ACAAGTTGACACATATC
ACAGCACTAGGATTCTCTTTCTCACAAGCTAGCGCTGCACTTTGGCGCCACATCCCACATGCAACAAGGAAGGGC----T
TATATACAGCTCCGTCACCGGCCGGCAACTTCAGCTCGGCGATCCATCCAT-------CTCTGCGGTATCCAACGATGAG
---CGCCGCGGTGGTGACCAAGTCGTCGCCGGTGCTGGTCGTCGGCCCGCCAGGCGGGGACGACGCCACCGTCCATCTCA
CCTCTTCCTTCGACAGGTCCGCCGTCCCTTTCAGGGTCACGGCGCTGCTCCTCTTCGACCGGTCGATCCCCGAGCCGGCG
GAGACCATCAGGACGGCACTCTATGAGGCGCTGGCCCACTACCGCCCCGTCGCCGGCCGTCTCGCTGCCGACGCCGACGG
CGATGGCGATC---TCCTGCGCATCGAGGGTGCGGCCGGCGTGCCTTTTGTCGCCGCGTCGGCGCGCTGCGCGCTGGCGG
ACGTTGCGGCGCCGCTGCTCGGCAGCCTCGCCGTGTGGTACCCGGGCGGGCTCTGCCGCCATGCCGACCCGCTGGTCCTG
GTGCAGGTCACCGAGTTCGCCTGCGGTGGTTTCGCCGTCGCGGCGACGTGGAACCACGTGCTGACCGACGGAGAGGGCAT
GGCGCAGTTCCTGGGGGCCGTCGGCGAGCTCGCGCGCGGGGCGTCGCCAGCGCCGTCCGTCCGGCCGCTCCGGGCCGACG
ACGACTCGCTCCCGCGCCTCCCCCAGTCATTGGTCGCGGCGCAGAAGCAGGCACTCAGCTGCGTGTTCAACAGGGACTTC
GCGCTCCTCGACTTCACCGTCCCCGCTGGGCTGATCGGCCGCGTCAGAGCCGACTTCGACGCCGCGGGCCTTGACGGC--
----GGGAAGCAACCCTGCACGGTATTCGAGGCCGTCTCGGCAGTGCTGTGGCAGTGCCGGACCCGCGCGGCCGTCGTCT
ACGTGTCCGACGAGGCCCCCGTGGCGCTGTCGTTCGCAGCCAACGTGCGTCGGCTCGTCGGCGCCAGGCCCGGGTACTAT
GGCAACTGCGCGGTGGTGCAGTCCGTGACCTCAACGCGCGGCCAGGTGGCGAATGGCGCCGTCGTGGATGTGGCGAGGAT
GATCCGGCGCGCGAAGGAGAGGATCCCGGATCTGCTTGTCCCCA---GCG---------GCACAACAACGGAACAGGGGG
CGATGGCGCTACCGTACCACACGCTGGTGCTGTCGTGCTGGAGGAACCTGGGGTTCGAGTCGACGGACTTCGGCGGCGGG
AGGCCGGCGCGGGTGAC------CTGGCA------TGGGGAGGAGACGGTGGTGCCGGGCTGCGTCGTGTGCCCGCCGGG
CAAGGACGGTGACAAGGACGGGGTTAGCGTCATGTCGCTCTGCGTCAGGCCAGAGCACGCCGACGCCTTGCTAGCAGAGC
TCACCACAT--CAGCAGATCTAAAGTTGTAAACTTGTAGTAGTAAGTTGTAACAGTGGAAGTTCCATGGACCCGGGTTCG
ACCGAATGAGCAGCAATGCTTCCTTTTTGTGTGCAAACAGAGCACGTCTGTATTTCCGCACATTCTGAATGATTCAGTGA
TATGTCTGCGAAAGACTGTAGTATAATGATTTACAAAGTTGTGTTTTATCCAATTCAAATATGAAAAGAAGCTGCAACAA
GATTTTTTTTCCCACCACAAAGAGCAGGGCCGTCTCCAGAAATTCGGTGCCCCGGTGCGAAATTCAATTGGGGCCCTAAA
ATCTAAGAGTTCCTTACAACGAAAGCATACTCTCCCACTTAAATTATATAATTTTGATTATGTGTTATT-TGTACTATAT
TCCTAAAGACAAGGGCAACTATCTTCATCAAACAATTCGACCCTAGAGCAATTGACATATAAAGATCTACTTCCTCTGTA
CTCCATGTTCAGTATTTATAAGACTAAGTTACAGAGGTTCTATTAATTAGCCAAAGAATTGGTGTATATGTACCCTATAC
TCACTAAATTACTGAACATGGAATGTATCCTAAAGTAAATTTGCTTTTGCTTGCGCACCTGATGGCCATTGACTGGCTGG
AGATGCCTAAATTAAAGCTCCTGATCATAGCGGCTGCCTTTTGCTCTGCTTTGCGGCATGTTGGCCCTTGCTGGCTTGGC
TGTTGCTGAATTTTGATTCAACTCATGGCGCGGCCACCTGCCCTGTCCTTGCTATTGTGCCGCCGCA---AAGATCTGAT
CGAGTCGAGGAACATGCGAAGATTGGAAATGAAGCGAGGAGGTAATTTTTTTTT--------------------------
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---
>chr2A_709
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-----------TACATGGAGGAA-TTTGGACCAGTTCCACC-AGGAACATGTTAGCCTCGTTAGGTGCGCCCAAGTTGAC
AAGTTTAGTAAGCATGTAGTAGCTGTTGTAGA--------CGTGTAGAGGCAGGCGAATCTTTACAAGTTGACATT----
---GCACTAGGATTCTCTTTCTCACAAGCTAGCGCTGCACTTTGGCG-------CCACATGCAATAAGGAAGGACCAGGT
TATATACAGCCCCGTCGCCGGCCGGCAATGGCAGTTCAGTTCCATCGGCCCATCTCTACTCTACGCTATCCAACGATGAG
---CGCCGCCGTGGTGACCAAGTCGTCGCCGGTGCTTGTCGTCGGCCCACCCGGCGGGGACGACGCCGTCGTCCATCTCA
CCTCCTCCTTGGACAGGTCCGTCGTGCCTTTCAGGGTCACGGTCCTGCTCCTCTTCGACCGGCCGATCCCCCAGCCGGCG
GAGACCATCAGGACGGCGCTCTCCGAGGCGCTGGCCCACTACCGTCCCGTTGCCGGCCGCCTCGCCGCCGA---------
CGATGGCGAGC---TCCTGCGCATCGAGGGCGCGGCCGGCGTGCCCTTTATCGCCGCGTCGGCGCGCTGCGCGCTGGCGG
ACGTCGCGGAGCCGATGCTCGGCGGCCTCGCCCCGTGGTACCCGGCCGGGCTCTGCCGCCACGGCGACCCGCTGCTCCTG
GTGCAGGTCACCGAGTTCGCCTGTGGCGGGTTCGCCGTGGCCGCGACGTGGAACCACGTGCTGACCGACGGAGAGGGCAT
TGCGCAGTTCCTGGGGGCCGTCGGCGAGCTCGCGCACGGGGCGTCGCCGGCGCCGTCCGTGCGGCCGCTCCGGGCCGACG
ACGGCTCGCTCCCGCGCCTCCCGCAGTCGATGGTCGCGGCGCAGAAGCAGACACTCAGCTGCACGTTCAACAGGGACTTC
GTGCTCCTCGACGTCACCGTCCCCGCCGGCCTGATCGGCCGCGTCAGAGCCGAGTTCGACGCCGCGGGCCTCGACGACGG
GAAGGGGAAGCAGCCCTGCACGGTGTTCGAGGCCGTCGCGGCGGTGCTGTGGCAGTGCCGGACCCGCGCGGCCGTCGTCT
CCGTGTCGGACGAGGCCCCCGTGGCGCTGTCGTTCGCGGCCAACGTGCGCCGGCTCGTGGGCGCCAGGCCCGGGTACTAC
GGCAACTGCGTGGTGATGCAGTCGGTGACCTCGACACGCGGCGAGGTGGCGAACGGCGCCGTGGCGGACGTGGCGAGGAT
GATCCGGCGCGCCAAGGAGGGGATCCCGGATCTGCTAGCCCCCAGCGGCG---------GCACAGCAGCGGAGCAGGGGG
CGATGGCGCTACCGTACAGCACGCTGGTGCTGTCGTGCTGGAGGAACCTGGGGTTCGAGGCGACGGACTTCGGCGGCGGG
AGGCCGGCGAGGGTGAC------GTGGCA------CGGGGCGGAGACGGTGGTGCCGGGCTGCGTGTTGTGCCCGCCGGG
CAAGGACGGTGGCAAGGACGGGGTCAGCGTCATGTCGCTCTGTGTCAGGCCGGAGCACGCCGACGCTTTCCTAGCAGAGC
TCACCACATTTCAGCAGATCTGAAGTTGTAAACTTGGAGTACGT---------AGTGGAAGCTCCATG------------
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---
>chr2B_911
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------------------------------------------------------CCACATTCAAAAAGGAAGAGCT---T
TATATACAGCCCCGTCGCCGGACGGCAATGGCAGCTCG---ATCGGCCAAT-------CTCTACGATATACAAAGATGGG
CGCCGCCGCGGTGGTGACCAAGTTGTCGCCCATGCTCGTCGTCGGCCCGCCCGGCGGGGACGACGCCGTCGTCCACCTCA
CCTCCTCCTTCGACAGGACCGCCGTCCCTTTTGGGGTCACGGCGCTGCTCCTCTTCGACCGGCCGATCCCCGAGCCGGCG
GAGACCATCAGGGCGGCACTCTCAGAGGCGCTCGCGCACTACCGGCCCGTCGCCGGCCGCCTCGCAGCCGAGGGCGACGG
CGACGGCGAGC---TCCTGCGCATCGAGGGTGCGGCAGGTGTGCTGTTCGTCGCCGCGTCTGCGGGCTACGCGCTGGCTG
ACATGACGACGCCGCTGCTCGCCGGCCTCGTCGCGCGGTACCCTAGCGGGGTCTGCCGCCACGCCGACCCGCTGCTGCTG
TTGCAGGTCACCGAGTTCGCCTGCGGGGGGTTCGCCGTCACGGCGACGTGGAACCACGTGCTGACCGATGGAGAGGGCAT
GGCGCAGGTCCTCGGTGCCGTCGGCGAGCTCGCGCGTGGGGCGTCGCCGGCGCCGTCCGTCGTGCCGCTCCGCGCCGACG
ACGGCTCGCTCCCGCGCCTCCCGCATTCGATGGTGGCCGCGCAGAAGCGGGCGCTCAGCTGTGTGTTCAGCAGGGACTTG
GCGCTCCTCGACGTCACCGTCCCCGCCGGCCTGATCGGCCGCGTCAGAGCCGAGTTCGACGCGGCCGGGCTCGGCGAC--
-------------CCGTGCACGGTGTTCGAGGCCGTCGCAGCTGTGCTGTGGCAGTGCCGGATCCGCGCGGCCGTCGTCT
CGGCCTCCGACGAGGCCCCCGTGGCACTGTCGTTCTCGGCCAACGTGCGCCGGCTTGTGGGCGCCAGGCCCGGGTACTAC
GGCAACTGCATGGTGGCGCAGTCGATGACGGCGACGCGCGGCGCGGTGGCGCACGGCACCGCCGCGGACGTGGCGAGGAT
GATCCGGCGCGCGAAGGAGAGGGTGCCCGACCTGCTCGCTCCCG---GCGCCGGAGCGGGCACCACAACGGAGCACGGGG
TGGCGGTACTG---TACGACACGCTGGTGGTGTCGAGCTGGAGGAACCTAGGGTTCGAGGCGGTGGATTTCGGGGGCGGG
AGGCCGGCGCGGGTGAC------GTGGCA------AGTGGAGGAGACGGTGGTGCCGTGCTGCGTCGTGTGCCCGCCGGG
CAAGGGCGGCGACCAGGACGGGGTCAGCGTCATGTCGGCCTGCGTCAGGCCGGAGCACGCCGACGCCTTCCTGGCAGAGC
TCACCGCAT--TAACAGACCTA----------------------------------------------------------
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---
>chr2D_934
ATATA---------------------------------------------------------------------------
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--------GCCCCGTCGCCGGTCGGCAACGGCAACTCTGGCGGTCCATCTTCACGAA------------CCAACGATGAG
---CGCCCGGGCGGTGACCAAGTCGGCGCCGGTGCTCGTCGCCGGCCCGCCTGGCGGCGACGACGCCGTGGTCCACCTCA
CCTCCTCCTTCGACCGGATCGTCCCTCCTATTGGGGTCACCGCGCTGCTCCTCTTCGACCGGCCGATCCCCGAGCCGGCG
GACACCATCAGGACGGCGCTCTCGAGGGCGCTTGCCCACTACCGCCCCGTCGCCGGCCGCCTCGCCGCCGACGCCGACGC
CGATGGCAAGC---TCCTGCGCATCGAGGGCGCGGCCGGCGTGCCGTTCGTCGCCGCGTCGGCGTCCTACGCGCTGGCGG
ACGTCACGGTGCCGCTGCTCGGCGGCCTCGCGGCGCGGTACCCCGGAAGGCTCTGCCGCCACGCCGACCCCCTGCTCCTG
GTGCAGGTCACCGTGTTCGCCTGCGGCGGGTTCGCCGTCGCCGCGACGTGGAACCACGTGCTGACGGACGGCGAGGGCAT
GGCGCAGTTCCTGGGCGCCGTCGGGGAGCTCGCGCGCGGGGCGTCCCCGGCGCCGTCCGTCACGCCGCTCCGCGCCGACG
ACGGCTCGCTCCTGGGCCTCCCGCCGACGATAGTCGCCGCGCAGAAGCAGGGGGGCAGCTCCATGCTCAGAATGAACCTC
GCGCTCCTGGACGTCACCGTCCCCGCCGGCCTGATCGGCCGCGTCAGGGCCGAGTTCGACGCCGCCGGCCTCGGCGGC--
-------------CCGTGCACGGCGTTCGAGGCCGTCGCGGCGGTGCTGTGGCGGTGCCGGACCCGCGCGGCCGTCGTCT
CAGTCTCCGACGAGGCCCCCGTGACCCTCTTGTTCGCGGCCAACATGCGCCGGCTCGCCGGCGCCAGGCCCGGGTACTAC
GGCAACTGCGCGGTGCTGCAGCCGCTGACCTCGACGCGCGGCGCGGTGGCGAACGGCGCGGCCGCGGACGTGCTGAGGAT
GATCCGGCGCGCGAAGGAGAGGATCCCCGACCTGCTCGCCCCCG---GCG---------GCACGACGACGGAGCAGGGGG
CGGTGGCGCTGACGTACAGCACGCTGGTGGTGTCGAGCTGGAGGAACCTGGGGTTCGAGGCGGCGGACTTCGGCGGCGGG
AGGCCGGCGCGGGTGACATGGCACTGGCA------CGGGGAGGGGACGACGGTGCCGAGCTGCGTCGTGTGCCCGCCGGG
CACGGACGGCGACAACGGCGGGGTCAGCGTGACATCGCTCTTCGTCAGGCCGGAGCACGCCAAGGCATTCCTAGCTGAGC
TC------------------------------------------------------------------------------
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---
>chr2A_995
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---------------------------------------------------------------------CCAACGATGAG
---CGCCGGGGTAGTGACCAAGTCGGCGCCGGTGCTCGTCGTCGGCCCGCCCGGCGGCGACGACGCCGTGGTCCACCTCA
CCTCCTCCTTCGACCGGATCGTCCCTCCTATCGGGGTCACCGCGCTGCTCCTCTTCGACCGGCCGATCCCCGAGCCGGCG
GAGACCATCAGGACGGCGCTCTCGAGGGCGCTGGCCCACTACCGCCCCGTCGCCGGCCGCCTCGCCGACCATGCCGACGG
CGATGGCAAGCTCATCCTGCGCATCGAGGGCGCGGCCGGCGTGCCGTTCGTCGCCGCGTCGGCGTCCTGCGCGCTGGCGG
ACGTCACGGCGCCGCTGCTCGGCGGCCTCGCGTTGCGGTACCCCGGAAGGCTCTGCCGCCACGGCGACCCCCTGCTGCTT
TTGCAGGTCACCGAGTTCGCCTGCGGCGGGTTCGCCGTGGCCGCGACGTGGAACCACGTGCTGACGGACGGCGAGGGCAT
GGCGCAGTTCCTGGGCGCCGTCGGGGAGCTCGCGCGCGGGGCGTCCCCGGCGCCGTCCGTCCTGCCACTCCGCGCCGACG
ACGGCTCGCTCCTGGGCCTCCCGCCGTCCACGGTCGCCGCGCAGAAGCAGGGGGGCAGCCCCATGCTCAAAATGAACCTC
GCGCTCCTCGACGTCACCGTCCCCGCCGGCCTGATCGGCCGCGTCAGGGCCGAGTTCGACGCAGCAGGCCTCGGCGAC--
-------------CCGTGCACGGCGTTCGAGGCCGTCGCGGCGGTGCTGTGGCAGTGCCGGACCCGCGCGGCCGTCGTCT
CCGTCTCCGACGAGGCCCCCGTGACCCTCTTGTTCGCGGCGAACCTGCGCCGGCTCGTCGGCGCCAGGCCCGGGTACTAC
GGCAATTGCGCGGTGCTGCAGCAGCTGACCTCGACGCGCGGCGCGGTGGCGAACGGCGCGGCCGCGGACGTGGCGAGGAT
GATCCGGCGCGCGAAGGAGAGGATCCCCGGCCTGCTCGGCCCCG---GCG---------GCACGACGACGGAGCAGGGGG
CGGTGGCGCTGACGTACAGCACGCTGGTGGTGTCGAGCTGGAGGAACCTGGGGTTCGAGGCGGCGGACTTCGGCGGCGGG
AGGCCGGCGCGGGTGAC------ATGGCACTGGTACGG---GGAGACGACGGTGCCGAGCTGCGTCGTGTGCCCGCCGGG
CACGGACGGCGACAACGGCGAGGTCAGCGTGACATCGCTCTTCGTCAGGCCAGAGCACGCCGACGCCTTCCTAGCCGAGC
TC------------------------------------------------------------------------------
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---
>chr2B_1430
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------------------------------TTCGCCGTCGCCGCGACGGGGAACCACGTGCTGACGGACGGCGAGGGCAT
GGCGCAGTTCCTGGGGGCCGTCGGGGAGCTCG--CGCGGGGCGTCCCCGGCTCCGTCCGTCACGCCGCTCCGCGCCGACA
ACGGCTCGCTCCTGGGCCTCCCGCCGTCGATGGTCGCCGCGCAGAAGCAGGGGGGCAGCTCCATGCTCAGAATGAACCTC
GCGCTCCTGGACGTCACCGTCCCCGCCGGCCTGATCGGCAGCGTCAGGGCCGAGTTCGACGCCGCGGGCATCGGCGCC--
-------------CCGTGCACGGCGTTCGAGGCCGTCGCGGCGGTGCTGTGGAAGTGCCGGACCCGCGCGGCCGTCGTCT
CCGTGTCCGACGAGGCCCCCGTGGCCCTCTCGTTCGCGGCCAACATGCGTCGGCTCGTCGGCGCCAGGCCGGGGTACTAC
GGCAACTGCACGGTGCTGCAGCCGCTGACCTCGACGCACGGCGCGGTGGCGAACGGCGCCGCCGCGGACGTGGCGAGGCT
GATCCGGCGCGCGAAGGAGAGGATCCCCGAGCTGCTCGCCCCCG---GCG---------GCGCAGCGACGGAGCAGGGGG
CGGTGGCGCTGACGTACAGCACGCTGGTGGTGTCGAGCTGGAGGAACCTGGGGTTCGAGGTGGCGGACTTCGGCGCCGGG
AGGCCGACGCGGGTGAC------ATGGCACTGGCACGGGGAGGAGACGACGGTGCCGAGCTGCGTCGTGTGCCCGCCGGG
CACGGACGGCGACAACGGCGGGGTCAGCGTGACATCGCTCTTCGTCAGGCCGGAGCACGCCGACGCCTTCCTAGCCGAGC
TCGCC---------------------------------------------------------------------------
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---
>chr4A_2465
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----------------------AGCAGGGCCGTCTTCAGAAATTCGGGGGCCCGGTGCGAAATGCAAATGGGCCTCTAAA
ATCTAAAAGTTTCTTGCAACGAAAGCATACTCTCCCACTTAAATTATA-GACTTTGGTTATGTGTTATTCTGTACGATAT
CCATAAAAACAAGGGCAACTATCTTTCTCAAACAATTCAACCCGAGAGCAATTGACATATAAAGATCTACTTCCTCTATA
ATGT----------TTTATAAGACTAAGTTACAGAGGTTCTATGAATTAACCGAAGAACTGGTGCACATGTACCCTACAC
TCACTAAATTACTGAACATGGAATGTAGCCTAAA-----TTTGCTTTGGCTTGCGCACCTGATGGCCATTGACCGGCCGG
GGATGCCTAAATTAAAGCTCCTGATCATAGCGTCTGCCTTCTGCTTTACTTGGTGGCGTTTTGGCCCTTGCTGGCCCGGC
GGTTGCTGAATTTTGATTGAATTCATGGCGCTGCCGCCTGCCCTGTCGTTGCGATTGCGCCGCCGCCAAGAAGATCTGAT
CGAGTCGAGGGACATGGGAAGATTGGAAACGAAGCGAGGAGGTAACT---------------------------------
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---
>chr3A_2472
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-----------------------------CCGTCTTCAGAAATTCGGGGGCCCGGTGCGAAATGCAAATGGGCCTCTAAA
ATCTAAAAGTT-----------------ACTCTCCCACTTAAATTATATGACTTTGGTTATGTGTTATTCTGTACGATAT
CCATAAAAACAAGGGCAACTATCTTTCTCAAACAATTCAACCCGAGAGCAATTGACATATAAAGATCTACTTCCTCCATA
ATGT----------TTTATAAGACTAAGTTACAGAGGTTCTATGAATTAACCGAAGAACTGGTGCACATGTACCCTACGC
TCACTAAATTACTGAACATGGAATGTAGCCTAAA-----TTTGCTTTGGCTTGCGCACCTGATGGCCATTGACCGGCCGG
GGATGCCTAAATTAAAGCTCCTGATCATAGCGTCTGCCTTCTGCTTTCCTTGGTGGCGTTTTGACCCTTGCTGGCCCGGC
GGTTGCTAAATTTTGATTGAATTCATGGCGCTGCCACCTGCCCTGTCATTGCGATTGCGCCGCCGCCAAGAAGATCTGAT
CGAGTCGAGGGACACGGGAAGATTGGAAACGAAGCGAGGAGGTAACTGATTGGGCATAGAGCCTAATCC-----------
---------------GGACAGCGTTCGACACAGCCCATGCGATAGATCGAGAGAGGGAGCTCGAGCGATCAGACCAGGCT
GGCAGGCCCAAATCCATGCAAACAAAGGAAGAG----ATCGTAATAGTACATATAACCTTGGCCCAAAACAGGGGCCCCC
TAAAATTTGGAGGCCCTGTGCGGTCGCACAGCCCGCACATGGCCTTGGAC------------------------------
---
>SNPs
-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS----S-----------S-S--S--------------------------------------------------------
--------S-S--------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSS-------------S-----S------
----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S----S---------S---
----SS----S--------S-----------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------S-----------------------------------------------------------------------
-------------------------S-------------------S----------------------------------
----------------------S---------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------S-----------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
------------------------------------------------------------------------S-------
-----------------------------------------------S--------------------------------
-----------------------------------------SS---S---------------------------------
---------S--------------------------S---------S--S------------------------------
----------------------------SS---------------------S---S------------------------
--------------------------------------------------------------------------------
----------------------------------S--------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
------------------------------------------------------SS-S---SSSS--SSSSSSSSSSSSS
SSSSSSSSSSSSSSS------S----S----S----S------------------------------------------S
--S---------------------------S-SSSSS---S--------S-----S--------------SS--S-----
--------SSS----------S---------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_943
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTCCCCCGAGGTATTTGCTC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_2633
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGGGTTCG
ACCGAATGAGC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
