>input_sequence_55659
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--------------------------------ATGACCGGAGTTCAGGTGATGCCGGGGGTGGGCGCGGTGACCACGGTC
GACGTGAGGACGGAGGGCGGCAAGGCGGTGGCGGGGCTCGCGAGGAGGCGTGTGGCGGTGGGGAGCAGCTCAAGCACGAG
CCTGTTTGCTGGTGACTGGAGGAGGAGGCCTCGCCGGGCGACCTGCTCCGTCAGGCTCAGGCAGTGTGGCCGGGGCAGGG
GCGGCAGGAGCGGCGGCCTCGCCATCGTCAGCAACCTCGGGGGCAGTTACGATGTTGGCTTTGGCGACGTCGACCTGGTA
ATTCATCAGCCTCTCCTCCGCCATCTACTTGCTGGAATTCTTCTACTTCTTGTTCTCAATCATCCATATATGTCATGTTA
CG-------------ACCTTGGGGAATTTCTTGGAACATCTCTTAC-AACAGTTCCTCGGCTGAAAGATTCAGATGATTT
TGTTTAGGG----------------ATGGTCAAGAATAGGTTTTTTTTAATTGTTGTTG--CAGCTTTGTTGCTTTAGGG
TAATGAATATGTGAATAGTA---TTTCAAGTTTCTTGAAGAAAAGAAAATGAAAAATGTTTCCTGTTCATGATGATGCAG
CAACTGATGAACTACTTTACCTACAAAGCCGTGAGGACCGTGCTGACCCAGCTCTACGAGATGAACCCACCCAGCTACCG
CTGGCTCTACAAGTAACAACATATTTGATCTCTCTCCAGTATGAAAATTCTAGCAATTAATTAGTACTAGTAATTTTGTT
ATTAAATCTTGGATTCTTGTTCCCCTGACAGCTTTGTTGCTGTAAACAAGCCCACCGATGGCAAGCTGTTCCTCCGCGCT
CTTGGAAAGGTATGAACAGATCCACACACATATTTTTGTTCTTCTTGCACTGCTACAAATTAGCATGCAAAATTCCTCGC
ATGAATATATGTTTTCTTTTGCTCTTGTAACTTGCAGGAGAGGCAGGAGCTTGCAGAGCGGGTTATGATAACCCGGCTTA
GCTTGTACGGGAAATGGATCAAGGTAATAATATTTTCCAAAACCAATCAACATGCCACAAATTTTCACCGCAAAAGGAAA
AACATCCACTAATTTTACGCACGACATGCCGTATATTTTTTAGCTGCTTAAAAAATTTAAATTAT----TATTAACATCT
GATTTGCTCATGTTTACTTAACCTGCAGAAATGTGACCACGCAAAAATGTACGAGAAGATCTCCAACGAGAACCTGGAGC
TGATGCGGGAGAGGCTCATGGAGACGGTCATCTGGCCAACCGACGACACCAACACGGAGAAGATCGGCTG--A-------
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>chr5A_1_TraesCS5A01G459200
ACCTCAAAAAAAAAGGCATCTTGGGCCTGCGGCGGTGAGGGGGAGAGTAGGCAGACGACCGGCTAGAACGGCGCAGCAAT
TGTGCTGTCCGAGCCACCCGCAAGGACCACGTGGGACCGAAAGAAGTGACTGAAAGTCCAAAA-GGTGATTTGGTGTATC
ACTAAACCCCAAGGTGACATGACATATAGTAGTATTTATCATGATATTTTCAAATTAAATACTTTCAGCTCGGGTATTCA
TAGG---AAATCCGAGCATCTGCTGGTCCTCTTTACCTTGTACTCCTTGGAACACCGAGATTACGTGCTCTGGCCAGCTG
CCGACGAGTTGTGGTGCGTCGTCGCTGCAAGGAACCTCGCAGGTCGAGGTGGTCGGCCGGAGGGCGCACACCAAGGTGTA
CCGTGCCGTGTGCAGCACTCTGTAGACCAGTAAACGAAAGGAGCTGAGAGACATCAAACATGGTACTCTG----CTGTAC
CTGGCTGGGAGGAAAAATCAGACACGTTGTAT-----GTACCCGGACGGGAACCGAGACCAGCATGCAGCAACCTCTCGG
CCGCGCCGTGGCCTGCTCTGGGTCTCCCGTTCAGAATTCAGATTCCTCCCAAGTTTTGGTTTCAGATTCACAGAATCCAC
GCGAGAGGAGGCGCCTCGTCTGCCCGGTCCACACACGTACG----CGCCTTGTCAAATGACACGCGGGGTCACACGAGAA
TTTCATTTTCTGAA--TCTTGCTGCCAAATTTACCCGGAATTGTTGAATCTTCAG-------------------------
------------------------TGGG-TTTTCCCCTGGTGGTGCTAAGCTGAAAATCGCGCGCGTC--CTGGGCCTCA
GAAAATTTGGTTGGTGAGCGTCGCAGCCAA-GCCAGCGCCAGCCACGGCGACCCAGCAGCAGTTCAACACCACCTCTTCT
TCCTCCGCCGGCCACTTACTTGGACACCTCCCCCAGCTCCTCCCTCGATTTTTATATACCACATACTGACACCAACCAAG
GAAATCACTAGCTGCTCACGGTGACGGTGAGGATGACCGGAGTTCAGGTGATGCCGGGGGTGGGCGCGGTGACCACGGTC
GACGTGAGGACGGAGGGCGGCAAGGCGGTGGCGGGGCTCGCGAGGAGGCGTGTGGCGGTGGGGAGCAGCTCAAGCACGAG
CCTGTTTGCTGGTGACTGGAGGAGGAGGCCTCGCCGGGCGACCTGCTCCGTCAGGCTCAGGCAGTGTGGCCGGGGCAGGG
GCGGCAGGAGCGGCGGCCTCGCCATCGTCAGCAACCTCGGGGGCAGTTACGATGTTGGCTTTGGCGACGTCGACCTGGTA
ATTCATCAGCCTCTCCTCCGCCATCTACTTGCTGGAATTCTTCTACTTCTTGTTCTCAATCATCCATATATGTCATGTTA
CG-------------ACCTTGGGGAATTTCTTGGAACATCTCTTAC-AACAGTTCCTCGGCTGAAAGATTCAGATGATTT
TGTTTAGGG----------------ATGGTCAAGAATAGGTTTTTTTTAATTGTTGTTG--CAGCTTTGTTGCTTTAGGG
TAATGAATATGTGAATAGTA---TTTCAAGTTTCTTGAAGAAAAGAAAATGAAAAATGTTTCCTGTTCATGATGATGCAG
CAACTGATGAACTACTTTACCTACAAAGCCGTGAGGACCGTGCTGACCCAGCTCTACGAGATGAACCCACCCAGCTACCG
CTGGCTCTACAAGTAACAACATATTTGATCTCTCTCCAGTATGAAAATTCTAGCAATTAATTAGTACTAGTAATTTTGTT
ATTAAATCTTGGATTCTTGTTCCCCTGACAGCTTTGTTGCTGTAAACAAGCCCACCGATGGCAAGCTGTTCCTCCGCGCT
CTTGGAAAGGTATGAACAGATCCACACACATATTTTTGTTCTTCTTGCACTGCTACAAATTAGCATGCAAAATTCCTCGC
ATGAATATATGTTTTCTTTTGCTCTTGTAACTTGCAGGAGAGGCAGGAGCTTGCAGAGCGGGTTATGATAACCCGGCTTA
GCTTGTACGGGAAATGGATCAAGGTAATAATATTTTCCAAAACCAATCAACATGCCACAAATTTTCACCGCAAAAGGAAA
AACATCCACTAATTTTACGCACGACATGCCGTATATTTTTTAGCTGCTTAAAAAATTTAAATTAT----TATTAACATCT
GATTTGCTCATGTTTACTTAACCTGCAGAAATGTGACCACGCAAAAATGTACGAGAAGATCTCCAACGAGAACCTGGAGC
TGATGCGGGAGAGGCTCATGGAGACGGTCATCTGGCCAACCGACGACACCAACACGGAGAAGATCGGCTG--ATATGCAT
GCGGTTTCAGTAATTTCAGCCGCTGAACTTCATTAATTAATTAGC---TCATCGGTTAATTAGGTAGAGCGAGGACTATG
CATGC--ACACGATTGAGTCAAACATGTGTATATAT--GTATGTGATCT---AGCACAGAGTCTATATGGTTGGGTCTTT
TGGTGGAGATACTGCAAGCTGTTTGTGTTGGTGTCGGTGTGTA----ATGTGCCGCCTGTG---TTGATAGGCACATTGA
CTAGCTGGGTTAAATGTATGGATTTAG----TCATCACCCATCAGTGCAAGGGTGTGTTTGAGCCCGGAGTTATATACAA
ATGCTCACGTGTTATGTGCCTCTCCATCTCAGTTTTATGCATCTCTCAATACTGTCATTACAACACTACAGAACAAGTTT
GTCTCCACCACCCCTTATGTAAAAGCCATGAGTTGTGGCCGATCTAAAACGTCCAAACCGCTCGGCTCTACCATTGCATT
TGACGGTCCTAGATTGATTCTATGTTTA----------------------------------------------------
------------ACACAACACAATACACCTTATACCTTTGAACGTACAGCAAAGTACTCGTTAGTCATGACTGTCGTTAC
TCGTATGGCATTCCGCACAATTCGCTATAAGAAATTTGTTGATATATGACAGGTTTTTGGTGATGTTCTTTGGAAACATC
ATATAATGGCCTAAATCCGGTTTCAACTTTCCTTCAGTGATCAAAAGCGGGCTAACCAGTCCCAATTGGGTGACACTTCT
TTATGTTGAAATGATGATTGCTGTCATAGATGTACAAGTAACATAGTTACTTAAATTA--AAAATAAAGATGTTCATGCT
TTAGATGCTACCCCCACTCAATGTTCAAACTTTTTTTCCAAAATACACAAAGAGTTTGTCATGAAT-------TTAATAA
ATTCAAATCACACACTTGTAGTTGAAACTTAATTTTGAATAAAAAAAGGTTTATATTTAAAAAGTTCAAGTTTGGAACTA
GTAAGATTTAATTAAATTTTAACATGTGCTTGCAGCAATCCAGGGCT
>chr5D_50
GGCG-------------------------------------------------GACAACGGGCTAAAACGGTGCGGCAAT
TCTGCCGTCCGAGCAGCCCGCAGGAGGACGT--GGGACGAAAGAAGTGACTGAAAGTCCAAAAAGGTGATTTGGTGCATC
ACTAAACCATAAGGTGACATTACATATAC-----TTTATCATGATATTTTCAAATCAT-TACTTTCAGCTTATAGGTATT
CTTAGAAAAATCCGAGCATCTGCTGGTCATTTTTGCCTTGTACTCCTTGGAACACCGAGATTACGTGCTCTGGCCGGCTG
CCGACGAGTTGTGGTGCGTCGTCGCTGCAAGGAACCTCGC---------TGGTCGGCCGGAGGGCGCACACGAAGTTGTA
CCGTGCCGTGTGCAGCACTCTGTAGACCAGTAAACGAAACGAGCTGAGAAACATCAAACATGGTACTCTAGCTACTGTAC
CTGGCTGGAAGGAAAAATCAGACACGTTGTAT-----GTACCCGGACGGGCACCGAGACCAGCATGCAGCAACCTCTCGG
CCGCGCCGTGGCCTGCTCTGGGTCTCCCGTTCAGAATTCAGATTCCTCCCAAGTTTTGGTTTCAGATTCACAGAATCCAC
ACGAGAGGAGGCGCCTCGTCTGCCCGGTCCACACACGTACGTACGCGCCTTGTCAAATGACACGCGGGGTCACACGAGAA
TTTCATTTTCTGAATCTCTTCCTGCCAAATTTACCCGGAATTCTTGAATCTTCAGCTCCGTGGCCAGTAGCACCAACCGG
TCGCGGCCGCGTGTCCGCCCGGCGTGGGTTTTTCCCCTGGTGGTGCTAAGCTGAAAATCGCGCGCGTC--CTGGGCCTCA
GAAAATTTGGTTGGTGAGCGTCGCAGCCAGCGCCAGCGCCAGCCACGACGACCCAGCAGCAGTTCAACACCACCTCTTCT
TCCTCCGCCGGCCACTTACTTGGGCACCTCCCCCAGCTCCTCCCTTGGTTTTTATATACCACATACTGACACCAACCAAG
GAAATCACTAGCTGCTCACGGTGACGGTGAGGATGACCGGAGTTCAGGTGATGCCGGGGGTGGGCGCGGTGACCACGGTC
GACGTGAGGACGGAGGGCGGCAAGGCGGTGGCGGGGCTCGCGAGGAGGCGTGTGGCGGTGGGGAGCAGCTCGAGCACGAG
CCTGTTTGCTGGTGACTGGAGGAGGAGGCCTCGCCGGGCGACCTGCTCCGTCAGGCTCAGGCAGTGTGGCCGGGGCAGGG
GCGGCAGGAGCGGCGGCCTCGCCATCGTCAGCAACCTCGGGGGCAGTTACGATGTTGGCTTTGGCGACGTCGACTTGGTA
ATTCATCAGCCGCTACTCCTTCGTCTACTTGTTGGAATTCTTCTGCTTCTTGTTCTCAATCATCCATATATGTCATGTGC
GAAGCAAAAGAAAGCACCTTGGGGAATTTCTTGGAACATCTCTTACCAACAGCTCCTCAGCTGAAAGATTCAGATGATTT
TGTCTATGTATG----TACTAGTACATGGTCAAGAATAGGTTTTATTTCTTTTTGTTGTTACAGCTTTGTTGCTTGAGGG
GAATGAATATGTGAATAGTAGTATTTCAAGTTTCTCCAAGAAAAGAAAATGAAAAATGTTTCCTGTTCATGATGATGCAG
CAACTGATGAACTACTTTACCTACAAAGCCGTGAGGACCGTGCTGACCCAGCTCTACGAGATGAACCCACCCAGCTACCG
TTGGCTCTACAAGTAACAACATATTT-ATCTCTCTCCAGTATGAAAATTCTAACAATTAATTAGTACTGGTAATTCTGTT
ATTAAATCTTGGATTCTTGTTCCCCTGACAGCTTTGTTGCTGTAAACAAGCCCACCGATGGCAAGCTGTTCCTCCGCGCT
CTTGGAAAGGTATGAACAGATCTG-------------GTTCTTCTTGCACTGCTACAAATTAGCACGCAAAATTCCTCAC
ATGAATATATGTTTTCTCTTGCTCTTGTAACTTGCAGGAGAGGCAAGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTA
GCTTGTACGGCAAATGGATCAAGGTAATAATATTTTCCTTACCCAATCAACATGCCACTAAGTTTCACCGCAAAAGGAGA
AACATCCACTAATTTTACGCACGACCTGCCGTATACTTTGTAGCTGC-TTAAAAATTTAAATTATTATATATTAGCATCT
GATTTGCTCATGGGTACTTAACGTGCAGAAATGTGACCACGCAAAAATGTACGAGAAGATCTCCAACGAGAACCTGGAGC
TGATGCGAGAGAGGCTCATGGAGACGGTCATCTGGCCCACCGACGACACCAACACAGAGAAGATCGGCTG--AT--GCAT
GCGGTTTCAGTAATTTCAGCCGCTGAAGTTCATTAATTAATTAGCTCATCATCGGTTAATTAGGTAGAGCGAGGACTATG
CAT----ACACGATTGAGTCAAACATGTGTATATAT--GTATGTGATCTACTAGCACAGAGTGTATATGGTTCGATCTTT
TGGTGAAGATACTA-----TGTTTGTGTTGGTGTCGGTGTATA----ATGTGCCGCCTGTGGTGTTGATAGGCACATTGA
CTAGCTGGGTTAAATGTATGGATTTAG----TCATCACCCATCAGTGCAAGGGTGTGTTTGAGCCCGGAGTTATATAAAA
ATGCTCACGTGTTATGTGCCTCTCCATCTCCGTTTTATGCATCTCTCAATACTGTCATTACAACACTACAGAACAAGTTT
GTCTCCACCACCCCTTATGTAAAAGCCATAAGTTGTGGCCGATCTAAAATGTCCGAACCACT------TACGATTGCATT
TGACGGTCCTAGATTGATTCTATGTTTAACACAACACAATACACTTTGTACCTTTGAACTTAAGATGCAATCCTAGATTG
ATTCTATGTTTAACACAACACTATACACCTTGTACCTTTGAACTTACAACAAAGTACTCATGAGTCATGACTATCGTTAC
TTATACGGAAAACCACACCATTCGCTATGAGAAATTTGTTGGTATATAACAGGTTTTTGGTTATGTTTGTTGGAAACATC
ATATAATGGCCTAAATCTGGTTTCAAATTTCCTTCAGTGATCAAAAGCGGGCTAACCAGCCCCAATCGGGTGACACTTCT
TTATGTTGAAATGATGATTACTGTTATAGATATACGAGTAACATAATTACTTAAATAAATAAAATAAAAATGTTCATGCT
TTAGATGCTACCCTTACTCAACGTTCAAACTTTTTTTTCGAAGTACACAAAGAGTTTAAAAATATCTATAATGTTAATAA
ATTCAAATCACACACTTGTAGTTGAAACTTAATTTTGAAC-AAAAAAGGTTTATATTTAAAAAGTTCAAGTTTTGAACTA
GTAAGAATTAATTAAATTTTAACATGTGCTTGCAGCAATCCAGGGCT
>chr5B_109
--------------------------------------------------------------------------------
----------------------------ACGTGGGGACGAAAGAAGTGGCTGAAAGTCCAAAA-GGTGATTTGGTGTATC
ACTAAACCCCAAGGTGACATTGCATA------TATTTATCATGGTATTTTTAAATTAAATACTTTCAGCTCAGGTACTCA
TAGAT-AAAATCCGAGCATCTGCTGTCC-TTTTTGCCTTGTACTCCTTGGAACACCAAGATTACGTGCTCTGGCCGGCTG
CCGACGGGTTCTGGTGCGTCTTCGCTGCAAGAAACCTCGCTGGTCGAGGTGGTCGGCCGGAGGGCGCACACGAAGGTGTA
CCGTGCCGTGTGCAGCACTCTGTAGACCAGTAAACGAAAGGAGCTGAGAAACATCAAACATGGT-------------TAC
CTGGCTGGAAGGAAAAATCAGACACGTTGTATTGTATGTACCCGGACGGGAACCGAGACCAGCATGCAGCAGCCTCTCGG
CCGCGCCGTGGCCTGCTCTGGGTCTCCCGTTCAGAATTCAGATTCCTCTCAAGTTTTGGTTTCAGATTCACAGAATCCAC
ACGAGAGGAGGCGCCTCGTCTGCCCGGTCCACACACGTACGTTA----CTTGTCAAATGACACGCGGGGTCACACGAGAA
TTTCATTTTCTGAA--TCTTCCTGCCAAATTTACCCGGAATTCTTGAATCTTCAGCTCCGTGGCCAGTAGCACCAACCGG
TCGCGGCCGCGTGTCCGCCCGGCGTGGG-TTTTCCCCTGGTGGTGCTAAGCTGAAAATCGCGCGTGTCCTCTGGGCCTCA
GAAAATTTGGTTGGTGAGCGTCGCAGCCAA-GCCAGCGCCAGCCACGACGACCCAGCAGCAGTTCAACACCACCTCTTCT
TCCTCCGCCGGCCACTTACTTGGGCATCTCCCCCAGCTCCTCCCTTGGTTTTTATATACCACATACTGACACCAACCAAG
GAAATCACTAGCTGCTCACGG------TGAGGATGACCGGAGTTCAGGTGATGCCGGGGGTGGGCGCGGTGACCACGGTC
GACGTGAGGACGGAGGGCGGCAAGGCTGTGGCGGGGCTCGCGAGGAGGCGTGTGGCGGTGGGGAGCAGCTCCAGCACGAG
CCTGTTTGCTGGTGACTGGAGGAGGAGGCCTCGCCGGGCGACCTGCTCCGTCAGGCTCAGGCAGTGTGGCCGGGGCAGGG
GCGGCAGGAGCGGCGGCCTCGCCATCGTCAGCAACCTCGGGGGCAGTTACGATGTTGGCTTCGGCGACGTCGACTTGGTA
ATTCATCAGCCTCTCCTCCTCCATCTACTTGTCGGAATTCTTCTGCTTCTTGTTCTCAATCATCCATATATGTCATGTGC
GAAGCAAAAGA-AGCACCTTGGGGAATTTCTTGGAACATCTCTTACCAACAGTTCCTCGGCTGAAAGATTCAGATGATTT
TCGTTTGTTTATGTACTAGTAGTACATGGTCAAGAATAGGTTTTTTTTTGC----GTTG--CAGCTTTGTTGCTTGACGG
GAATGAATATATGAATAGTACTATTTCAAGTTTCTCGGAGAAAAGAAAATGAAAAATGTTTTCTGTTCATGATGATGCAG
CAACTGATGAACTACTTCACCTACAAAGCCGTGAGGACCGTGCTGACGCAGCTCTACGAGATGAACCCACCCAGCTACCG
CTGGCTCTACAAGTAACAACATATTT-ATCTCTGTTCAGTATGAAAATTCTAGCAATTAATTAGTACTGGTAATTCTGTT
ATTAAATCTTGGATTCTTGTTCCCCTGACAGCTTTGTTGCTGTAAACAAGCCCACTGATGGCAAGCTGTTCCTCCGCGCT
CTTGGAAAGGTATGAACAGATCCACAGACATATTCTTGTTCTTCTTGCACTGCCAT-AATCAGCACGCAAAATTCCTGAC
ATGAATATTTGTATTCTCTTGCTCCTGTAACTTGCAGGAGAGGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTA
GCTTGTACGGCAAATGGATCAAGGTAATAATATTTTCCAAAGCCAATCAACATGCCACTAATTTTCACCGCAAAAGGAAA
AACATCCACTAATTTTACGCACGACCTGCCGTATATTTTAGCTG---TTTATACATTGAAATTATTATATATTAGCATCT
GATTTGGTCCTGTTTAATGAACGAGCAGAAATGCGACCACGCGAAGATGTACGAGAAGATCTCGGAGGAGAACCTGGAGC
TGATGCGGGAGAGGCTCATGGAGACGGTCATCTGGCCAACCGACGACACCAACACGGAGAAGATCGGCTGATAT--GCAT
GCGGTTTCAGTAATTTCAGCCGCTGAAGTTCATTAATTAATTAGC---TCATCGGTTAATTAGGTAGAGCGAGGACTATG
CATGCACACACGATTGAGTCAAACATGTGTATATATATGTATGTGATCT---AGCAGAGAGTCTATATGGTTGGGTCTTT
TGGTGGAGATACTGCAAGCTGTTTGTGTTGGTGTCGGTGTATGTATCATGTGCCGCCTGTG---TTGATAGGCACATCGA
CTAGCTGGGTTAAATGTATGGATTTAGTCATTCATCACCCATCAGTGCAAGGGTGCGTCTGAGCCCGAAGTTATATACAA
ATGCTCACGTGTTATGTGCCTCTCCGTCTCAGTTTATACATC--------------------------------------
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S-----S-----S--S-----
-S---S--------SS------S-SSSS-------SS-------------------------------------------
--------------------S-------SSSS---------------------------------------S--------
---S------------------------S-S---S----------------------------------------S----
----------------------------------------S------------------------------S--------
-------------------------------------------------S-------------------S----------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------S---------------------S-------------------------------------
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-----------------------------------------------S--------------------------------
-----------------------S---------------------S-S--------------------------------
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-----------------------------------------------------------------------S--------
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--------------------------------------------------------------------------S-----
-------------------S-----------S------------S---------------------------------SS
SS------------------------------------------------------------------------------
--------S---------------------------------------SS--S-S--------------------S----
S----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------S------S----
--------------------------------------------------------------------------------
--------------------------S-------S------------------------------S------------S-
-----------------S------------------------------------------S--S--------SS------
----------S------------------------------S----------------S---------------------
-------------------------S-------------S---------S------------------------S-----
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------SS----
---------------------------S----------------------------------------------------
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----------------------------------------S---------------------------------------
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-----------------------------S-------------------S----S----S--SSSSSS---S--------
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---------------------S---------S-----------S----S----------S-S----------S-------
-SS--S--S-SS--S---S---------S------------S-----S-------------S-----SS-----------
-----------------S--------S--------------------------------S------S-------------
-------------------S----S------S---S---------S----------S-----------S-----------
-------------SS------S---------------S-S--S--------------SSS-SS-SS--------------
---------------------------------------SS--------------------------------S------
------S----------------------------------------
>forward_316
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--------------------------------------------------------GAGATTACGTGCTCTGGCCA----
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>reverse_2074
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-------------------------------------------------------------------------CGGCTTA
GCTTGTACGGGAA-------------------------------------------------------------------
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>forward_1392
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------------CTCCTCCGCCATCTACTTGC------------------------------------------------
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>reverse_2601
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----------------------------------------GTAATGTGCCGCCTGTGTTG--------------------
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