>input_sequence_55626
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-------------------------------------ATGCTCTCCCCCGCCTCGCCGCTCCCCGGCCCCGACCACCTCT
CCTTCCCCTTCGCCCTCTCCGCCGCCGCCGCGGCCCCCGTCGCCCCGCCCCCAGGCCCGCAGCTCCACGCGCTCCTCGTC
AAGAACGCCCTCTTCCCCTCCGACCACTACGTCACCACCGCGCTGCTCCAGCTCCACGCGCCCCGCCCGGACGACGCGCG
GAGGGTGTTCGACGAGTTGCCGCGGCGGGAGGCCATCCACTACGACCTGGTCATCGGGGCGTACGCGCGCGCCGGGATGG
CCGCCGAGGGGCTGGCGCTGTTCAGGGCCATGTTCGTGGACGGGGTGGCGCCGGACGCCGTCGTGCTCACGACGGCGGTC
GCGGCGTGCGCCCAGTCCGGTGCGCTGGAGTGCGGGGAGTGGGTGCACCGGTACGTGGAGAGCAACGCGCCTGGGCTGCT
CGCGGACGCTTTCGTCGGGTCGGCGCTGGTAAGCATGTACGCCAAATGCGGGTGCCTGCAGGAGGCCGTGAGGGTGTTCG
AGGGAATGCCGGAGCGGAATGAGTACGTCTGGGGCACAATGGTTGGAGCGTTCGCGGTGCACGGCATGGCGAGGGAGGCA
GTGGCGTGCTTGGAGAGGATGGCAGGCGAGGACGGGGTGCGCCCGGATGGCGTGGCGGTGCTCGGGGCGCTGTCCGCCTG
CGCACACGCTGGAAAGGTTGAAGACGGGCTCAGACTTCTCAAGGAGATGCGGCGGCGGTACGGCGTCACCCCGGGGCACG
AGCACTACAGCTGCACGGTCGACATGCTGTGCCGAGTCGGGCGGCTGGAGGACGCGGTGGGTCTGATCGGGACAATGCCG
ATGACCCCGCTTGCATCGGTGTGGGGCTCTCTCCTAGCAGGCTGCCGGATGTACGGCAACGTCAAGTTGGCTGAGGTGGC
GGCCAAGGAGCTCGAGAAGCTAGGCGTGGGCGCCGACGAGGGCGTGTACGTCCAGCTGTCCAACATTTATCTTGACGCCA
ACCGCAAGGATGACGCGCGGAGGGTGCGAAAGCTGATCGGCAGCCGGGGGCTCAAGAAGGTTCCAGCGTATAGCGCGGTG
GAGGTCGACGGCGAGCTAAGCTCGTTCGTCGCTGACGACCAGGCGCATCCGCGGCGGTTCGAGATATGGGACTTGCTTGG
GCTGCTCGCTGACCAGATGGGGCTGAAGTCAGACGAGGAGGACGAA---GAAGAAGAAACAACCTTTTCGTTGCGCCCTT
GTA--GCAATAAAAGGAAATTTGAAAACCATGTAACAGACTAA-------------------------------------
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-----------------
>chr4D_1_TraesCS4D01G064600
CTGAGTCGATGGACTCCCATGGTGCGTCCATGGCCTCGCATCGCCAACGGAGGGGTTGCACGTCCTCCACCGCATTCGGA
CATCAGTTGGACCGCACGGCCTCCGGTGAGGCAGTGACGGCACAACTAGTGCCAGATCCATGCACCATTTGGGTGGACGC
AATGGATTCCTAATGGAAGGAGTCCGAGCGCTGCCTCACATAGCATCC-TCCCGGGAGCGGCGACGCGCAAGCCGAATGG
CCATCTCCTCCTCGGGGCCGCGTGGGATGAGCTCAGGGTCGCCTGATCTAAAAAATGAGGTGGAGGACTCGAATCGGCTG
CCCGTCATGTCGGAGAAGGCCGGAGCTTGCCGGACGGGAGCTTGTGTGACGGAGAGGAGTGTAAGGGAGTGGAGTGAAGT
GGTTAGGGTTTGGTTCGGCAAGCGAATGGGAAGAAATATATATGGGGTCGGG----------------------------
-------------------------------------------TGGGTATGAGGGGTGCCGGTCAGCCCGACA-TTTGAG
ACTCGTTTAAGGCGTCCGTCTGGGTCAAACTTTCGCTACTGCTCAGTGACCGGGCCGTCCGCCCGGACGTTTGAGACAGG
TTTGAGACGACGGGCGGTAAATGCTCTAATTAAACTTTGCACCGTT-TGACTT-AAACC-AAAATTACAAGGTTCTCTTT
TTCAAAGGCAGAGAGGGGGTACAGGGCCAGCAACTCGGCCCTCTTCAAGAACAGAGAGGTCTCTCCCATTCCCGCCGACT
GCTTCCCCG-GCCAGACCAAACCAGCATGCGATGCGCCCGTACATCCCCAAGGCAACCTTCGCCTTCTGCCACTCGCTCC
TCTCCTCCCGCTTCCGGCCGTCCGCCGCCTCGCCGGCGGCGCCGCTCCTCCCCGTCCAGGCCCTCCTCACCACCGCCGGC
CTCTCCCCGCGCCACCCGGAGCTCTCCCTCGTCGCGCTCAACTCGCTCCTCCGCGTCCTCGCCCGCGGCGCCTCCTCCCA
GGCCCACCCGCTCCTCGCCCTCCGCCTCCTCCTCCTCATGCTCTCCCCCGCCTCGCCGCTCCCCGGCCCCGACCACCTCT
CCTTCCCCTTCGCCCTCTCCGCCGCCGCCGCGGCCCCCGTCGCCCCGCCCCCAGGCCCGCAGCTCCACGCGCTCCTCGTC
AAGAACGCCCTCTTCCCCTCCGACCACTACGTCACCACCGCGCTGCTCCAGCTCCACGCGCCCCGCCCGGACGACGCGCG
GAGGGTGTTCGACGAGTTGCCGCGGCGGGAGGCCATCCACTACGACCTGGTCATCGGGGCGTACGCGCGCGCCGGGATGG
CCGCCGAGGGGCTGGCGCTGTTCAGGGCCATGTTCGTGGACGGGGTGGCGCCGGACGCCGTCGTGCTCACGACGGCGGTC
GCGGCGTGCGCCCAGTCCGGTGCGCTGGAGTGCGGGGAGTGGGTGCACCGGTACGTGGAGAGCAACGCGCCTGGGCTGCT
CGCGGACGCTTTCGTCGGGTCGGCGCTGGTAAGCATGTACGCCAAATGCGGGTGCCTGCAGGAGGCCGTGAGGGTGTTCG
AGGGAATGCCGGAGCGGAATGAGTACGTCTGGGGCACAATGGTTGGAGCGTTCGCGGTGCACGGCATGGCGAGGGAGGCA
GTGGCGTGCTTGGAGAGGATGGCAGGCGAGGACGGGGTGCGCCCGGATGGCGTGGCGGTGCTCGGGGCGCTGTCCGCCTG
CGCACACGCTGGAAAGGTTGAAGACGGGCTCAGACTTCTCAAGGAGATGCGGCGGCGGTACGGCGTCACCCCGGGGCACG
AGCACTACAGCTGCACGGTCGACATGCTGTGCCGAGTCGGGCGGCTGGAGGACGCGGTGGGTCTGATCGGGACAATGCCG
ATGACCCCGCTTGCATCGGTGTGGGGCTCTCTCCTAGCAGGCTGCCGGATGTACGGCAACGTCAAGTTGGCTGAGGTGGC
GGCCAAGGAGCTCGAGAAGCTAGGCGTGGGCGCCGACGAGGGCGTGTACGTCCAGCTGTCCAACATTTATCTTGACGCCA
ACCGCAAGGATGACGCGCGGAGGGTGCGAAAGCTGATCGGCAGCCGGGGGCTCAAGAAGGTTCCAGCGTATAGCGCGGTG
GAGGTCGACGGCGAGCTAAGCTCGTTCGTCGCTGACGACCAGGCGCATCCGCGGCGGTTCGAGATATGGGACTTGCTTGG
GCTGCTCGCTGACCAGATGGGGCTGAAGTCAGACGAGGAGGACGAA---GAAGAAGAAACAACCTTTTCGTTGCGCCCTT
GTA--GCAATAAAAGGAAATTTGAAAACCATGTAACAGACTAACAAGTTAAGCAGT-------GAGCACGGAGCAGCAAC
CGATATATATTCATTTATTATTGCCAAGGAATATGATACTCAGGAAACAACGGGACAGTATTCAGCACCAAACACAAAGT
ATATTTTGTTTCTGAGTTTTTCCTTTTTCCTTCCAATTTTCTTCAAATTTTGAGTGCGTCCTCTTGATATATGATGGAAT
GGTTCGCCAGCACTGCTCGACCTCTTGATCATACTAAAGTTTTCACTTCCCTGAGAGATTCTGTATTGTTGATTT--TTT
GGAGATTTTTTTGGCCTTAAAATCTTCAGCCATATGGCCATAATCAAATGCAAAGCTCATTGTATTATATTATCTTTTGT
AGGATTGTT--------------------CTTCTGGTATCATTAGGGTTACAATTACTATTTGACTTTCGGTTCTTATAT
TGGTGCACCTTTAACCCGCCCTGTATTTCCTGAACAGCGTAATTAAGGATTTGCTTCGCCCACTGATTGGATCATATGCT
ACTTAGTTAGGTAACCCAATTACCTGTCATTTTTAATTCCATTATGGTTAATTACCTGTCAGTAGAATCTATCTTCACCT
ACAGGTTGCTTGGATGTTTAGATCAGAGTCATCCATTTCTAATGCTAGAATATGTTGCAGACTTGAAGGTGTGCAATCCA
TACCATCAAGAGGAAAAATATACCAGGAGAACTTCTGTTTGC-AAGCATATGTGGAGGTTGAAATGGTTAGTATGGTACG
AACCTTTTAGATTAGCTATACAGTGCAGAAGGAAGTATTCAGA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TACTTA
CACATCATGAGTTCGAAC---------------------------------AACAGCCTATTACTTCAGAGTGGATATTT
TGATATTCATGGTTGAGACAAACACTTTGATACCAGCGATCAGCGAACCAAATTCTCAAGCAAGCAACATAGTGATGTTT
ATTCCTCCTCCTTAGTGAATTATCATTTTCTAGATAGCTAGGTACAAATTTGATTAGACCATAAGGGGGATTCTACCCTC
ATCCATGCAGTATATGT
>chr4B_2
-TGAGTCGATGGACGCCCATGGTACGTCCATGGCCTCGGAGCGCCAATGGAGGGGTTGCGCGTCCTCCACTACGTTCGGA
CGCCAGTCGGACCGCACAGCCTCCGGTGAGGCAGCTACGACACACTTAGTGTCGGATCCATGGACCATTTGGACGGACGC
AATGGATTTCCAATGGAAGGAGGCCGAGCGTTGCCTCACACGGGCCTTTTCCCGGGAGCGGCTGAGCGCAAGCCGAACAG
CCATCTCCTCCTCGGGGCCGCGTGGGATGAGTTCGGAGTCGACGGATCTG------GAGGTGGGGGATCTGAATCCGCTG
CCCGTCATGTTGGAAAAGGCCAGAGCTTGCCGGGCAGGAGCTTGAGTGGCAGAGTGGAGTGTGGGGGAGTGAAGTGAAGT
GGTTAGGATTTGGTCCGGCAAGTGGATAGGGAGGAATATATGTGGGGTCGGGTTGGCCAGTGTTGTCCGGGTCCGATGTA
GTGGACGCTCCCAGGCGCCTCATATCCGCCCCATATTTTGGGCTGGGTATGAGGGGTGCTGATCATCCTGGACGTTTGAT
GCTCGTTTGAGGCGTCCGCCTGGATCAAATTTTCGCGCCCGATCACT--------CGTCCGCCCGTGCGTTTTAAGCAGA
TTTGGGACGTTCGGCTGTAGATGCTCTAATTAAACTTTGCACCGTTTTGACTT-AAACCAAAATTTACAAGGTTCTCTTT
TTCAAAGACAGAGAGGGAGTACAGGGCCAGCAACTCGGCCCTCTTGAAGAACAGAGAAGTCTCTGGCATTCCCGCCGACT
GCTTCCTCCAGC-------------------ATGCGCCCGTACATCCCCAAGGCAACCTTCGCCTTCTGCCACTCGCTCC
TCTCCTCCCGCTTCCGCCCGTCCGCCGCCTCGCCGGCGGCGCCGCTCCTCCCCGTCCAGGCCATCCTCACCACCGCCGGC
CTCTCCCCGCGCCACCCGGAGCTCTCCCTCGTCGCGCTCAACTCGCTCCTCCGCGTCCTCGCCCGCGGCGCCTCCTCCCA
GGCCCACCCGCTCCTCGCCCTCCGCCTCCTCCTCCTCATGCTCTCCCCCGCCTCGCCGCTCCCCGGCCCCGACCACCTCT
CCTTCCCCTTCGCCCTCTCCGCCGCCGCCGCGGCCCACGTCGCCCCGCCCCCCGGCCCGCAGCTCCACGCGCTCCTCGTC
AAGAACGCCCTCTTCCCCTCCGACCACTACGTCACCACCGCGCTGCTCCAGCTCCACGCGGCCCGCCCGGACGACGCGCG
GAGGGTGTTCGACGAGTTGCCGAGGCGGGAGGCCATCCACTACGACCTGGTCATCGGGGCGTACGCGCGCGCCGGGATGG
CCGCCGAGGGGCTGGCGCTGTTCAGGGCCATGTTCGCGGACGGGGTGGCGCCGGACGCCGTTGTGCTCACGACGGCGGTC
GCGGCGTGCGCCCAGTCCGGCGCGCTGGAGTGCGGGGAGTGGGTGCACCGGTACGTGGAGAGCAACGCGCCAGGGCTGCT
GGCGGACGCGTTCGTCGGGTCGGCACTGGTGAGCATGTATGCCAAGTGCGGCTGCCTACAGAAGGCGGTCAAGGTGTTCG
AGGGAATGCCGGAGCGGAATGAGTACGTCTGGGGTACCATGGTCGGTGCGTTCGCGGTGCATGGCATGGCGAGGGAGGCA
GTGGCCTGCTTGGAGAGGATGGCAGGCGAGGACGGGGTGCGCCCGGATGGCGTGGCAGTGCTCGGGGCGCTGTCCGCCTG
CGCACACGCCGGAAAGGTTGAAGACGGGCTCAGACTTCTCAAGGAGATGCGCCGGCGGTACGGCGTCACCCCGGGGCACG
AGCACTACAGCTGCACTGTCGACATGCTGTGCCGGGTCGGGCGTCTGGAGGACGCGGTAGGGCTAATCGGGACAATGCCG
ATGACCCCGCTCGCATCCGTGTGGGGGTCTCTCCTAGCAGGCTGCCGGATGTACGGCAACGTCGAGTTGGCAGAGGTGGC
AGCCAAGGAGCTCGAGAAGCTAGGTGTTGGCGCCGACGAGGGCGTGTACGTCCAGCTGTCCAACATTTATCTCGATGCCA
ACCGCAAGGATGACGCGCGGAGGGTGCGAAAGCTGATCGGCAGCCGGGGGCTCAAGAAGGTCCCGGCGTATAGCGCGGTG
GAGGTCGACGGCGAGCTAAGCTCTTTTGTCGCTGACGACCAGGCGCATCCGCGGCGCTTTGAGATATGGGACGTGCTTGG
GCTGCTCGCTGACCAGATGGGGCTGAAATCAGAC------GAGGAA---GAAGAAGAAACAACCTTTTTGTTGCGTCCTT
GTATAACAAGAAAAACAAATTTAGAAACCATGTGACAGACTAACAAGTTAAGCAGT-------GAGCA-------GCAAA
CGATATTTCTTGAT---TTATTGCCAAGGAGTATGATACTCAGGAAACAACAGAACATTGTTCAGCACCAAACACAAAGT
ATTTTGTTTC---GAG-TTGTTCCTTGTCTTTCCAGTTTTGTTCAAATTTGACAGT-GTCCTCTTGATATACGATGGAAT
GATTCGCCAGCACTGCTCGACCTCATGATCATACTAAAGTCTCTATTTCCCTAAGAGATTCTGTATTGTTCATTT--TA-
-GAGATTTTTTTTACCTTAAAATCTTCAGCCATATTGCCATAATCAAATACAAGTC----------------TCTTTTGT
AGGATTGTTCTTCTGGTATTAGGATTGTTCTTCTGGTATCATTAGGGTTACAATTACTATTTGACTTTCAGTTCTTATAT
TGGTGCACCTTTAACCCGCCCTGTATTTTCTGAACAGTGTAATTAAGGGTTTGCTTCGCCCACTGATTGGATCATATGCT
ACTTAGTTAGGTAACCCAATTACCTGTCATTTTTAATTCCATTATGCTTAATTACCTGTCAGTAGAATCTATCTTCACCT
ACAGGTTGCCTGGATGCTTAGTTCAGAGTCATCCATTTCTAATGCTAGAATATGTTGCAGACTTTAAGGTGTGCAACCCA
TACCATCAAGAGAAAAAAGATACCAGGAG-ACTTCTGTTTGCAAAGTATACGTGGATGTTGAGATGGTTAGTATGGTATG
AACCTTTTAGATTAGCCATACAGTGCAAAAGGAAGTATTAAGA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TACTTA
CAAATCATGAGTTCGAACAACAGCCTATTACTCTCTCTTTTTTTGCGGGGAAACAGCCTATTACTTCAGAGTGGATATTT
TGTTATTCATGGTTGAGACAAACACTTTGATACCAA-------CAAACCAAATTCTCAAGCAAGAAAC--AGTGATGTTT
ATTCATCTTCCTTAGTGAATTATCATTTTCTAACTAGCTAAGTACAAATTTGATGA-ACCATAAGGGGGATTCTACCCTC
ATCCATGTAGTATATG-
>chr4A_556
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GTTTGAGGCAAG
TTTGAGACGTTCGGCTGTAGATGCTTTAATTAAACTTTGCACAGTT-TGACTTGAAACCAAAATTTACAAGGTTCTCTTT
TTCAAAGATAGGGAGGGAGTATAGGGCCAGCAACTCGGCCCTCTTGAAGAAGACAGAGGTCTCTCCCATTCCCGCCGACT
GCTTCCCCCAGCCAGACCAAACCAGCATGCGATGCGGCCGTACATCCCCAAGGCAACCTTCGCCTTCTGCCACTCGCTCC
TCTCCTCCCGCTTCCGGCCGTCCGCCGCCGCCCCCGCGGCGCCGCTCCTCCCCGTCCAGGCCCTCCTCACCACCGCCGGC
CTCTCCCCGCGCCACCCGGAGCTCTCCCTCGTCGCGCTCAACTCGCTCCTCCGCGTCCTCGCCCGCGGCGCCTCCTCCCA
GGCCCACCCGCTCCTCGCCCTCCGCCTCCTCCTCCTCATGCTCTCCCCCGCCTCGCCGCTCCCCGGCCCCGACCACCTCT
CCTTCCCCTTCGCCCTCTCCGCCGCCGCCGTGGCCCCCGTTGCCCCGCCCCCCGGCCCGCAGCTCCACGCGCTCCTCCTC
AAGAACGCCCTCTTCCCCTCCGACCACTACGTCACCACCGCGCTGCTGCAGCTCCACGCGCCCCGCCCGGACGACGCGCG
GAGGGTGTTCGACGAGTTGCCGCGGCGGGAGGCCATCCACTACGACCTGGTCATCGGGGCGTACGCGCGCGCCGGGATGG
CTGCCGAGGGGCTGGCGCTGTTCAGGGCCATGTTCGCGGACGGGGTGGCGCCGGATGCCGTCGTGCTCACGACGGCCATA
GCGGCGTGCGCCCAGTCCGGCGCGCTGGAGTGCGGGGAGTGGGTGCACCGGTACGTGGAGAGCAACGCGCCGGGGCTGCT
TGTGGACGCGTTCGTCGGGTCGGCGCTGGTGAGCATGTATGCCAAGTGCGGCTGCCTACAGGAGGCGGTCAGGGTGTTCG
AGGGAATGCCCGAGCGGAATGAATACGTCTGGGGCACCATGGTCGGCGCGTTCGCAGTGCACGGCATGGCGAGGGAGGCA
GTGGCGTGCTTGGAGAGGATGGCAGGCGAGGACGGGGTGTGCCCGGACGGCGTGGCGGTGCTCGGGGCGCTGTCCGCCTG
CGCACACGCCGGAAAGGTTGAAGACGGGCTCAGACTTCTCAAGGAGATGCGCAGGCGGTACGGGGTCACCCCGGGGCACG
AGCACTTCAGCTGCACGGTCGACATGCTGTGCCGGGTCGGGCGGCTGGAGGATGCGGTGGGGCTGATCGGGACAATGCCG
ATGACCCCACTCGCATCGGTGTGGGGGTCTCTCCTAGCAGGCTGCCGGATGTACGGCAATGTCGAGTTGGCAGAGGTGGC
AGCCAAGGAGCTTGAGAAGCTAGGCATGGGCGCGGACGAGGGCGTGTACGTCCAGCTGTCCAACATTTATCTGGACGCCA
ACCGCAAGGATGATGCGCGGAGGGTGCGAAAGCTGATCGGAAATCGGGGGCTCAAGAAGGTCCCGGCATATAGCGCGGTC
GAGATCGATGGCGAGCTAAGCTCGTTCGTCGCTGACGACCAGGCGCATCCGAGGCGCTTCGAGATATGGGACTTGCTTGG
GCTGCTCGCTGACCAGATGGGGCGGAAGCCAGAC------GAGGAGGAGGAGGAAGAAACAACCTTTTCATTGCATCCTT
GTA--ACAAGAAAAACAAATTTGAAAACCATGTAACAGACTAACAAGTTAAGCAGTGAGCGCGGAGCA-------GCAAA
CGATATTTATTGAT---TTATTGCCAAGGAATATGATACTCAGGAAAGAACAGAGCAGTGTTCAGCACCAAACACAAAGT
ATTTTGCTTC---GAATTTTTTCCTTTTCTTTCTAGTTTTGCTCAAATTTGATTGG-GTCGTCTTGATATATGATGGAAT
GGTTCGCCAGCACTGCTTGACCTCTTGATCATACTGAAGTTTCCATTTTCCTAAGAGATTCTGTATTGTTGATTTCTTA-
-GAGAATTTTTTGGCCTTAAAATCTTCAGCCATATTGCC-TAATCAAATGCAAGGCTCAGTGTACCATATTATCTTTTGT
AGGATTGTTCTTCTGGCATTAGGATTGTTCTTCTGGTATCATTAGGGTTACAATTACTATTTGACTTTCGGTTCTTATAT
TGGTGCACCTTTAACCCGCCCTGTATTTCCTGAACAGCGTAATTAAGGATTTGCTTCGCCCACTGATTGGATCATATGCT
ACTTAGTTAGGTAACCCAATTACCTGTCATTTCTAGTTCCATTATGGTTACTTACCTGTCAGTAGAATCTATCCTCACCT
ACAGGTTGCTTGGATGCTTAGTTCAGAGGCATCCATTTCTAATGTCAGAATATGTTGCAGACTTTAAGGTGTGCAATCCA
TACCATCAGGAGGGAAAAGATACCAGGAG-ACTTCTGTTTGCAA-GCATATGTGGATGCTGAAATGGTTAGTATGGTATG
AACCTTTCAGA---------CAGTGCAGAAGGAATTATTCAAATCCTTTTCTAAAAAAAGGAATTATTCAAATACTCCCT
CCGTTCCTAAATATTTGTCTTTTTAGAGGTTTCAAATGGTGACTACATACGGAGCAAAATGAGTGAATCTATACTCTAAA
ATATGTCTATATACATCCGTATGTGGTGACCATTTGAAATCTCTAGAAAGACAAATATTTAGGAACGGAGGGAGTACTTA
CGAATCATGAGTTCTAATAACAGCCTATTT---------------------------------CTTCCGAGTGGATATTT
TGAACTTCGTGGTTGAGACAAACACTTTGATACCAA-------CGAACCAAATTCTCAAGCAAGCAACATAGTGATGTTT
ATTCCTCATCCTTAGTGAATTATCATTT-CTAGATAGCTAGGTACAAATTTGAT-AGACCATAAGGGGGATTCTACCCTC
ATCCATGTAGTATATGT
>SNPs
S-------------S--------S--------------S-S------S-----------S----------SS-S------
-SS----S---------S----------------SS---S----SS-----S-S--------S---------SS------
--------S-S-----------S-------S---------SS-SSSSS--------------SSS------------SS-
-------------------------------S--S-S----S-S-----SSSSSSS-------S---SSS-----S----
----------S---S------S-----------S-S--------S---S-S---S-------SS-------S--------
-------S------S-------S-S--S--S--S-------S--------------------------------------
-----------------------------------------------------------S-S---S--S-SSS------S
S-------S---------S----S-----S------SS-S-S---S-SSSSSSSS----------SS--------S----
---------SSS---S---S-------------------------------------------S----------------
-------S---------S---------------------------S----------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------S--------------------------------------------------S--------
S--------S--------------------S--------S-----S-----S-----S--------S--S----------
-------------------------------------S-----S--S---------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------------S----------------------------
----------------------------------S--------------------------S------------------
-----------S--------------S------------------------------------S-------S--------
S-----------------------------------------------------------------------S-------
-------------------------------------------------------------S--S---------------
--------------------------------------------------------S-----------------------
----------------------------------SSSSSS--S--------------------------------S----
-----S---S----SS----------------------------------------------------SSSSSSS----S
------S----S--SSS----------------------------------S-S-----S--------------------
--S--S-S-SSSS--------S-S-----S-----S----S---------SSSSS-S-----------------------
------------------------------------------S--S------S-------------------------SS
S----------------------------------S-----------------S-----S----SS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S----S------------------------------------------S---------------
------------------S----------S--------------------------S---------------------S-
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-----------------------------------SSSSSSSS-------------------------------------
-------S----------------------------------------------S-------------------------
-------S---------
>forward_428
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--------TTTGGTTCGGCAAGCGAATG----------------------------------------------------
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-----------------
>reverse_1770
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---------TGGAAAGGTTGAAGACGGGC---------------------------------------------------
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-----------------
>forward_611
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------TTCGCTACTGCTCAGTGACC-----------------------------
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-----------------
>reverse_2001
--------------------------------------------------------------------------------
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GGCCAAGGAGCTCGAGAAG-------------------------------------------------------------
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-----------------
>forward_1397
--------------------------------------------------------------------------------
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-----------------CTGTTCAGGGCCATGTTCGT-------------------------------------------
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>reverse_3476
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-----------------------------------GCGATCAGCGAACCAAATTCT------------------------
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-----------------
