>input_sequence_55591
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-----------------------------------------------------------ATGGCTGCGGCGGCGGGGGGC
GGCGGAGGAGCGAAGGCGACGGTGGCGGAGCAGATAGGGCAGGCGGTGCAGTCCACCTCCAACCTTCTCCAGCTCATGGA
GCAGTCCTCCCCTGCCCAGGTCTCCCTCCCCCTCTCTTCCTCTC-TCCTTGTCTGTTTCTTGCTGTTTCGCATCCGTTTG
GATGTGATACAAGAGCAACAATTTGTCAAGTCTGGGGAATTTCGACAGGAAGTAGGTGCTGATTCGTGCAGACTGTTTAT
TCAGGTGCCCCCAAGGGTGTGAATCTTGCGATAGACGTGGTAGTTCCTCCTTGCAGTTAGGTTTTGAATGAATTTTCACG
CCATTGTGATTGCTTCCTAGTTAATCTGTTGCATCTTATAATCTAATATT---------------TTGTGTCAAGACCGC
ATTGAACATTTTGTCCACATTTAT---------CAAGTAGTGAGAGCTTTGATTGGCATTGAGAAAGTTGCAAAAATACT
GCTCTGGAGTGTTCAGATGCAGCATGGTATTACAGTTCTAGATTATTTGTGTGCTTTCATTCTTGTCCAGACCTCGTGGT
GCTTAATCAATCAGATTGCTAGTGGAAGTCACCCTGATTGCGATAATGTTCTGTCCCCCAAAATATCGAAGTTACAAGCC
TACAATTACAAAATATGCTAGTTCACTGAATTCAGGAGTCTCAGTATAATTTTGACTATGGGGTCTGTGTCCAGAATAAA
TATTTTGTATCATTGTGCTAACACGGGGTCCTTTTTGTCACAGGTCCACTTGGCTAAACTCCCTAAGAATCTCTTGGCAA
AAGCATCTCTTACAAAGAACACAGAGCAAGTAAAATGTCATTTTGCATTGATGTGAAATTATATCCCTGTAATGTAGCTA
TTGACATTTGTATCCTAACATATTCTAGGTGCTACAACAACTACCTAATGTAATTTCTTCCTTGGATGCTTTTATGGACA
GTAGTTTGCAAAGGTGACTGCCCGAACTTCATGTCATTTACACAGTCATCTTGCTAATAATATTCTAAAGCACCTGTAGC
TTTTCCAAAGAGCTTCTTTAACCATAATTTATTCTCTACATATTTCTACCGCATGGTTGAAGGTACTTTTCCTCTTTGTC
ACCTGTGGTAACATCATATTTTAAACTATGCAGCGCATCTCAAATTAAGACTGTCACACAACTGTTGTCAAACATGGAGA
CCACCCAGCTCAAATCTATTTTGCCTGCCTCTCGATTACAGAAAGATCAAAAGAATACTGAGCCTGGAGAACTCAGGGTT
GACTGA--------------------------------------------------------------------------
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--------------------------------------
>chr1A_1_TraesCS1A01G213300
TCAGTCTCACTCCATCTGCTAGAAAATGTCATTGAAATTCGTGATATGAATTATCAACGTAAGTATCTAAAGCATTCGTC
TGGTTTAATCCTACAAACAGCTAGGATTAGTAGGTAGAACAAGAGTATCTACAGGCTACAGCACTCTCCTGTGGGCAGTA
TCTGGTTTTAAGAGAAGAACATCAGTTTGTAACCAAACTTCCGGGCACTGATCAACCACAGGACCCTTCAGATAATTTTG
TAAGTAATTAAACCTCCAGATACTGACGGATTTGAGTGATATTTTGTAACCTGTTATTTTGGGAAGAGAGTACATTGATT
AATCTACCACTACCAGGATGATTCTTCGACCATACATCAAACATTGAGCTTAAAACGCAATCATGGTCAATCTCATTCCA
CAAATCTACATATCCACGGATATATTTTGAAGAAGGCAATCTGGCTATCGCACAGCAAAAGCTGAAAACAATTGAAATGG
AACGGGGAGGATGTAAGGAGAGGTTACGTTTGGAAGCGGAGCTGGTCTTCGGGGACGGTGTCGATGAGGTTGATCTGGTC
GTAGAGCGAGAAGGTCCTCCTGATCAAGCCAAATCCACATCCCGGTCAAATCAAATCCAGCAC------------GCGTC
ATCCACCAGCATCGCCTACGAAGGA------GGGGGAAGCCGATGCGTACCTGAGAGACGGGAGGTGCCTGAGCCTGGGA
GCGTTGGAGTTGGAGATGGAATCGCTCCGCAGCGACCTCACCAGCGTCGCCAGCGCCTTTTGCCCCCGCGCCGCCGCCAT
GTCCTCCTCCTCTTCCTCGCCGCCGGTCGGTGGGGGCGTGTCCTGTTCTAGGGGGTTCGGGAGTTTTCGACCCACCACCT
CTGG-AATGTTTCGAATTGCGAATGGCTCCTTACATGGACAGCCCACGTGGCCCATGTTGCAGTTGACTGGGCTGGGCCT
CGAATTATTCTGAGGCTGCGCTGTGCGACGGCGACGGCGACGACGACGACGACCAGGAGATGGCTGCGGCGGCGGGGGGC
GGCGGAGGAGCGAAGGCGACGGTGGCGGAGCAGATAGGGCAGGCGGTGCAGTCCACCTCCAACCTTCTCCAGCTCATGGA
GCAGTCCTCCCCTGCCCAGGTCTCCCTCCCCCTCTCTTCCTCTC-TCCTTGTCTGTTTCTTGCTGTTTCGCATCCGTTTG
GATGTGATACAAGAGCAACAATTTGTCAAGTCTGGGGAATTTCGACAGGAAGTAGGTGCTGATTCGTGCAGACTGTTTAT
TCAGGTGCCCCCAAGGGTGTGAATCTTGCGATAGACGTGGTAGTTCCTCCTTGCAGTTAGGTTTTGAATGAATTTTCACG
CCATTGTGATTGCTTCCTAGTTAATCTGTTGCATCTTATAATCTAATATT---------------TTGTGTCAAGACCGC
ATTGAACATTTTGTCCACATTTAT---------CAAGTAGTGAGAGCTTTGATTGGCATTGAGAAAGTTGCAAAAATACT
GCTCTGGAGTGTTCAGATGCAGCATGGTATTACAGTTCTAGATTATTTGTGTGCTTTCATTCTTGTCCAGACCTCGTGGT
GCTTAATCAATCAGATTGCTAGTGGAAGTCACCCTGATTGCGATAATGTTCTGTCCCCCAAAATATCGAAGTTACAAGCC
TACAATTACAAAATATGCTAGTTCACTGAATTCAGGAGTCTCAGTATAATTTTGACTATGGGGTCTGTGTCCAGAATAAA
TATTTTGTATCATTGTGCTAACACGGGGTCCTTTTTGTCACAGGTCCACTTGGCTAAACTCCCTAAGAATCTCTTGGCAA
AAGCATCTCTTACAAAGAACACAGAGCAAGTAAAATGTCATTTTGCATTGATGTGAAATTATATCCCTGTAATGTAGCTA
TTGACATTTGTATCCTAACATATTCTAGGTGCTACAACAACTACCTAATGTAATTTCTTCCTTGGATGCTTTTATGGACA
GTAGTTTGCAAAGGTGACTGCCCGAACTTCATGTCATTTACACAGTCATCTTGCTAATAATATTCTAAAGCACCTGTAGC
TTTTCCAAAGAGCTTCTTTAACCATAATTTATTCTCTACATATTTCTACCGCATGGTTGAAGGTACTTTTCCTCTTTGTC
ACCTGTGGTAACATCATATTTTAAACTATGCAGCGCATCTCAAATTAAGACTGTCACACAACTGTTGTCAAACATGGAGA
CCACCCAGCTCAAATCTATTTTGCCTGCCTCTCGATTACAGAAAGATCAAAAGAATACTGAGCCTGGAGAACTCAGGGTT
GACTGATGTGTTCACTGTGGCTTATGCGAAAAGGTAGTTTAGTGTTTCTTCTTTGGGACACCTCTTATTCTTGTTTGTTT
GGTGCATAAATGCATTGATTTTTGTTAACAAATTATCTCCAATTGAACTAATCTTTGCTAGTGTTTATTTAAAAATTCAG
TGTGATTGAAAGCAAACTAAACACTAGCTTTGGGTTATTCATGAAAGCTGCTTGGTCAATCATCACTTCGTCACTACATT
TGACATGTTTCGGTGATTGACTAAAACTCAGAATTTTCT-----------------------------------------
------------------------------------------------------------------ACTT----------
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----------------CAAATCGCATATTGTTGTATTGGATGTGGACCATCTATTTCTTTACTGTGCTAGGCAGTAGGCA
CAACGTCATGCCTGAAATTGTGTCTGAGAATCGTTTGGGGTTAATGGTAACTGCAGAATGTGGAACTAGTAAAGATCTCA
GGATT-ACTTGTTTGCTCCCCATGTTTACCCTACCAAAAATGTGGTTAGCCAATATTTTGGTTGAGGTTTTGCATGCCTG
TGAGTTGGCCAACATTGGCTAGAAAAATGAACTAGAGTTGCGAAAGAGCATTGGCATGCCAAAAAGTTGGCAATCATCCA
AACAAGGACCAATGTTTTGGCCATGACCAAAAAATTCGGTAGGGTGGACATTGGTGGCGATTCAAACATACCC-------
-----------TGAACTCATTTTTCTTTTGCAAACTGTTTTTTGTTGGCATGTGGAACCTTTGTATCTCTTTTTTATTCA
AATGGAGGGATTGCTTCATCTAAACAAACTGATTCATTTTTTTTCCATTTCATAGCAAATCTTGGCATCTCACCAAAGCC
TAGGCTTAGCTGACTTCTGCTGGAGAACCAAGGTAGTAACTGAAGAATTGTACTAGTTAACAAGACTCAGGTGGCGGGTG
GCTCTGGAATGTGCAAAGGGCCCTTGTTGTGTTTCAGAGACGATGAGATCTACATAGTGAGCTTATGGATACTTCTTTTA
AACTTTAGACCTTTAGTGTGGGTTCTGTAGAACTGTGA
>chr1B_1
TCAATCTCACTCCATCTGCTAGAAAATGTCATTGAAATTCGTGATATGAATTATCAACGTATGTATCTAAAGCATTCGTC
TGGTTTAATCCTACAAACAACTAGGATTAGTAGGTAGAACAAGAGTATCTACAGGCTACAGCACTCTCCTGTGGGCAGTA
TCTGGTTTTAAGAGAAGAACATCAGTTTGTAACCAAACTTCCGGGCACTAATCAACCACAGGACCCTTCAGATAATTTTG
TAAGTAATTAAACTTCCAGATACTGACCGATTTGAGTGATATGTTGTAACCTGTTATTTTGGGAAGAGAGTACATTGATT
AATCTACCACTACCAGGATGATTCTTCGAGCATACATCAAACATTGAGCTTAAAACACAACCATGGTCAATCTCATTCCA
CAATTTTACATATTTACGGATATATTTTGAAGAAGGCAATCTTGCTATCGCACAGCAAAAGCTGAAAACAATTGAAATGG
AACTGGGAGGATGTAAAGAGAGGTTACGTTTGGAAGCGGAGCTGGTCTTCGGGGACGTTGTCGATGAGGTTGATCTGGTC
GTAGAGCGAGAAGGTCCTCCTGATCAAGCCAAATCCACGTCCCAGTCAAATCAAATCAGCACGCATCATCCACCAGC---
----------ATCCCCTACGAAGGAGAGAAGGGGGGAAGCCGATGCGTACCTGAGAGACGGGAGGTGCCTGAGCCTGGGA
GCATTGGAGTTGGAGATGGAATCGCTCCGCAGCGACCTCACCAGCGTCGCCAGCGCCTTTTGTCCCCGCGCCGCCGCCAT
GTCCTCCTCCTCTTCCTCGCCGCCGGTCGGTGGGGGCGCGTCGTGTTCAAGGGGAGTCGGGAGTTTTGCACCCACCACCT
CTGAAAATGTTTCGAGTTACGAATGGCTCCTTACATGGACAGCCCACGTGGCCCATGTTGCAGTTGGCTGGGCTGGGCCT
CGAATTATTCCGAGGCTGCGGTGTGCGGCGGCGAC---------GACGACGACCAGGAGATGGCTGCGGTGGCGGGCGGC
GGCGGAGGAGCGAAGGCGACGGTGGCGGAGCAGATAGGGCAGGCGGTGCAGTCCACCTCCAACCTTCTCCAGCTCATGGA
GCAGTCCTCCCCTGCCCAGGTCCACCTCCCCCTCTCTTCCTCTCGTCCTTGTCTGTTTCAACTGGCTGCGAGCT------
------------------CAATTTGTCAAATCTGGGGAATTTTGGCAGGAAGTAGGTGCTGATTCATGCAGAATGTTTAT
TCAGGTGCCCCCAAGGGTGTGAATCTTGTGATAGATGTGGTAGTTCCTCCTTGCAATTAGGTTTTGAATAGATTTTCACG
CCATTATTATTGCTTGCTAGTTAATCTGTTGCATCTTATAAATTTATAATCTACTGTATAATATATTGGGTCAATACCGC
ATTGAACATTTTATGGACATTTATGATTTATATCAAGTATTGAGAGCTTTGATTGGCATTGAGAAAGTTGCAAAAGTACT
GCTCTGGAGTGTTCAGATGCAGCATGGTATTACAGTTCTAGATTATTTGTGTGCTTTCATTCTTGTCCAGACCTCGTGGA
GCTTAACCAGTCAGAATGCTAGTGGAAGTCACCCTGATTGCGACAATGTTCTGTCCCCAAAAATATCGAAGTTACAAGCC
TACAATTACAAAATATGCTAGTTCACTGAATTCAGGAGTTTCAATATAATTTTGACTATGGGGTCTGTGTCCAGAATAAA
TATTTTGTGCCATTGTGCTAACACAGGGTCCTTTTTGTCACAGGTCCACTTGGCTAAACTCCCTAAGAATCTCTTGGCGA
AAGCATCTCTTACAAAGAACACAGAGCAAGTAAAATGTCATTTTGCATGGATGTGAAATTATATCCCTG-AATGTAGCTA
TTGACATGTGTATCCTGTCATATTCTAGGTGCTACAACAACTACCTAATGTAATTTCTTCCTTGGATGCTTTTATGGATA
GTAGTTTGCAAAGGTGACTTTCCCAACTTCATGTCATTTACACAGTCATCTTGCTAATAATATTCTAAAGCAGTTGTAGC
TTTTCCAAAGAGCTTCTTTAACCATAATTTATTCTCTACATATTTCTACCACATGGTTGAAGGTACTTTTCCTCTTTGTC
ACCTGTGGTAACATCATTTTTTAAACTATGCAGCGCATCTCAAATTAAGACTGTCACACAACTCTTGTCAAACATGGAGA
GCACCCAGCTCAAATCTATTTTGCCTGCCTCTCGATTACAGAAAGATCAAAAGAATACTGAGCCTGGAGAACTCAGGGTT
GACTGATGTGTTCACTGTGGCTTATGCAAAAAGGTAGTTTAGTTTTTCTTCTTTGGGCCACCTCTTATTCCTGTTTGTTT
GGTGCATAAATGCATTGATTTTTGTTAACAAATTATCTCCAATTGAACTAATCTTTGCTAGCGTTTATTTAAAAATTCAG
CGTGATTGGAAGCAAACTAAAAACTAGCTTTGGGTTGTTCATGAAAGTTGCTTGGTCAATCATCACTTCGTCACTACATT
TGACATGTTTCAGTGA-TGACTAAAACTCAGAATTTCTACCCCCTCCGATCCATATTAATTGTCGCTGATTTAGTCAATT
TGATTAAATCAGCGACAATTAATATGGATCGGAGGAAGTAGTTCATTCAGTTGGCCTACCATGATCACTTACCGAAAAAG
GGTTTCCCCCCGCTTTATAAATAAAGCAACTTCCACCAATCACACGGTAACTGCTGGGGCGCACAGCACATCAAGCCCAA
AAGAGAAAGAAGAAGAACAAAATGCCAACAACGGCAACTCGGCAAAGCTAAGATGATCCGCCTCCGCTGCGCCCTCCGGA
TTCGTCCCACCACACACCAAGGCTCCGAATCGCCGCGTAACCAAGCAGCACCTCCAAAAAGGGGTGCGACGTCGACGACG
CTGCTGCCCGGACATGTCCTACGGTTTCCCCCGGCACGCGGAGAGGAGTGGAGGATGGGTAACACCTACGCCCCTCAGGA
AGGAAAGGCGACGCCCGCAGGCGACACCGCGTCGGCGCCGAAAGAACCGGCAGGGATTTCTCCCGCATCCCAACCACCAC
TATCCGTCCGATCCGGAGCCAACCAGCCAGCCAACCACCAACCAGCATACGCCACCACGGTCTTGAAGTCATCCATGCCG
CCTCATTGAGACCGCCATCACGAGGCCTAGAGGATGGAGAGAGGAGCGCCAGAAATCGGGAGGGGGAGCACCGGAGCCGC
GCCGGAGGGAACCACCTCCACCACCATTGTGCGGGAGGCCTGTGCCTCCAGCACCGTCGCGGGTGCCGACCGGACGTGGC
CGCAGTGGCACACCAGGCCACCCCAGGCCCGGCCAGGCCCATCTCGGGCCCGCAAAGCCGCTGCCGCCCCGCTGCAGNNN
NNNNNNNGCCGCGTAACCAAGCAGCACCTCCAAGAAGGGGTGCGACGTCGACGACGCTGCTGCCCGGACATGTCCTACGG
TTTCCCCCGGCACGCGGAGAGGAGTGGAGGATGGGTAACACCTACGCCCCTCAGGAAGGAAAGGCGACGCCCGCAGGCGA
CACCGCGTCGGCGCCGAAAGAACCGGCAGGGATTTCTCCCGCATCCCAACCACCACTATCCGTCCGATCCGGAGCCAACC
AGCCAGCCAACCACCAACCAGCATACGCCACCACGGTCTTGAAGTCATCCATGCCGCCTCATTGAGACCGCCATCACGAG
GCCTAGAGGATGGAGAGAGGAGCGCCAGAAATCGGGAGGGGGAGCACCGGAGCCGCGCCGGAGGGAACCACCTCCACCAC
CATTGTGCGGGAGGCCTGTGCCTCCAGCACCGTCGCGGGTGCCGACCGGACGTGGCCGCAGTGGCACACCAGGCCACCCC
AGGCCCGGCTAGGCCCATCTCAGGCCCGCAAAGCCGCTGCCGCCCCGCTGCAGCAAGCCGGCGACGGTGCCGCCCCCACC
CAGCCTTCCTACGCCCGAACTGCACCTCCAGGGGGCTCCGCCGTCGATGAGAAGCCGCCGGCCCGCCGCGGCCCAGATGG
GCCCGAAGGGGCCCAGATCTGGGCCGAGCAGGCGCCGCCACCCCCCACCACCGCGAGCTCCGCCGCCAACGGCAGCGCCG
CCGCGCAGCCAGCCTCCCACGCCTGCGCCAGGTTGCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGGGCCGCCGCCACCGGCGCCGCCCGGGG
CAAGCCCGGCACCGCACGCCGGCGGCGGCGGGGGGGAAGGTGGCGGGGGAAGGCCTCTGGAGAAGGGGGACGGAAGCGCG
GCCGGCCGCCCGCGGGGAGGCGGCGCGGTCGCGAGAGAGGAAAAAAGAATATAAGATCAAGAGCTTTCTGGAACTTGCTT
TCCACCATGATCACTTTAAATTGCATATTGTTATATTGGATGTGAACCATCTATTTCTTTACTGTGCTAGGCAGTAGGCA
CAACGTCATGCCTGAAATTGTGTCTGAGAATCATTTGGGGTTAATGCTAACTGCAAAATGTGGAACTAGTAAAGATCTCA
GGATTTACTTGTTTGCTCCCCATGTTTGCCCTACCAAAAAAGTGGTTAGCCAATATTTTGGTTGAGGTTTTGCATGCCCG
TGAGTTGCCCAAAATTGGCTAGAAAAATGAACTAGAGTTGCGAAAGAGCATTGGCATGCCAAAAAGTTGGCAGTCATCCA
AACAAGGACCAATGTTTTGGCCATGACCGAAAA-TTCGGTAGGGTAGACATTGGTGGCAATTCGAACATACCCTTAAATC
TGCACAAAAAATGAACTCATTTTTCTTTTGCAAACTTTTTCTTGTTGG--------ACCTTTGTATCTCTGTTTCTTTCA
AACGGAGGGATTGCTTCATCTAAACAAACTGGTTCATTTTTTTG-TATTCCATAGCAGATCTTGGCATCTCACCAAAGCC
TAGGCTCAGCTGACTTCTGCTGGAGAA-CAAGGTAGTAACTGAAGAATTGTAGTTGG---CAAGACTCAGGTGGCGGGTG
GCGCTGGAATGTGCAAAGGGCCCT--------------------------------------------------------
--------------------------------------
>chr1D_139
--------------------------------------------------------------------------------
----------------------------------------------------------CAACACTCTCCTGTAGGTAGTA
TCTGGTTTTAAGAAAATAACATCAGTTTGTAACTGAACTTCCGGGCACTGATCAACCACAGGACCCTTCAGAAATTTTGC
-----AATTAAACCTCCAGATACTGACCGATTTGAGTGATATTTTGTAACCTGTTATTTTGGGAAGAGAGTACATTGATT
AATCTACCACTACCAGGATGATTCTTCGACCATACATCAAACATTGAGCTTAAAACGCAACCATGGTCAATCTCATTCCA
CAAATTTACACATTCACGGATATATTTTGAAGAAGGCAATCTTGCTATCGCACAGCAAAAGCTGAAAACAATTGAAATGG
AACTGGGAGGATGTAAGGAGAGGTTACGTTTGGAAGCGGAGCTGGTCTTCGGGGACGTTGTCGATGAGGTTGATCTGGTC
GTAGAGCGAGAAGGTCCTCCTGATCAAGCCAAATCCACGTCCCGGTCAAATCAAATCCAGCAC------------GC---
----------ATCCCCTACGAAGGAGAGAACGGGGGAAGCCGATGCGTACCTGAGAGACGGGAGGTGCCTGAGCCTGGGA
GCGTTGGAGTTGGAGATGGAATCGCTCCGCAGCGACCTCACCAGCGTCGCCAGCGCCTTTTGCCCCCGCGCCGCCGCCAT
GTCCTCCTCCTCTTCCTCGCCGCCGGTCGGTGGGGGCGCGTCGTGTTCTA-GGGGGTCGGGAGTTTTGCACCCACCACCT
CTGAAAATGTTTCGAGTTACGAATGGCTCCTTACATGGACAGCCCACGTGGCCCATGTTGCAGTTGGCTGGGCTGGGCCT
CGAATTATTCCGAGGCTGCGGTGTGCGACGACGAC---------GACGACGACCAGGAGATGGCTGCGGCGGCGGGCGGC
GGCGGAGGAGCGAAGGCGACGGTGGCGGAGCAGATAGGGCAGGCGGTACAGTCCACCTCCAACCTTCTCCAGCTCATGGA
GCAGTCCTCCCCTGCCCAGGTCCACCTCCCCCTCTCTTCCTCTCGTCCTTGTCTGTTTCAACTGGCTGCGAGCT------
------------------CAATTTGTCAAATCTGGGGAATTTTGACAGGAAGTAGGTGCTGATTCATGCAGAATGTTTAT
TCAGGTGCCCCCAAGGGTGTGAATCTTGTGATAGATGTGGTAGTTCCTCCTTGCAATTAGGTTTTGAATAGATTTTCACG
CCATTATTATTGCTTGCTAGTTAATCTGTTGCATCTTATAAATTTATAATCTACTGTATAATATATTGGGTCAATACCGC
ATTGAACATTTTATCGACATTTATGATTTATATCAAGTATTGAGAGCTTTGATTGGCATTGAGAAAGTTGCAAAAGTACT
GCTATGGAGTGTTCAGATGCAGCATGGTATTACAGTTCTAGATTATTTGTGTGCTTTCATTCTTGTCCAGACCTTGTGGA
GCTTAACCAGTCAGAATGCTAGTGGAAGTCACCCTGATTGCGACAATTTTCTGTCCCCAAAAATATCGAAGTTACAAGCC
TACAATTACAAAATATGCTAGTTCACTGAATTCAGGAGTTTCAATATAATTTTGACTATGGGGTCTGTGTCCAGAATAAA
TATTTTGTGCCATTGTGCTAACACAGGGTCCTTTTTGTCACAGGTCCACTTGGCTAAACTCCCTAAGAATCTCTTGGCAA
AAGCATCTCTTACAAAGAACACAGAGCAAGTAAAATGTCATTTTGCATGGATGTGAAATTATATCCCTGTAATGTAGCTA
TTGACATTTGTATCCTATCATATTCTAGGTGCTACAACAACTACCTAATGTAATTTCTTCCTTGGATGCTTTTATGGACA
GTAGTTTGCAAAGGTGACTTTCCCAACTTCATGTCATTTACACAGTCATCTTGCTAATAATATTCTAAAGCAGCTGTAGC
TTTTCCAAAGAGCTTCTTTAACCATAATTTATTCTCTACATATTTCTACCACATGGTTGAAGGTACTTTTCCTCTTTGTC
ACCTGTGGTAACATCATTTTTTAAACTATGCAGCGCATCTCAAATTAAGACTGTCACACAACTGTTGTCAAACATGGAGA
GCACCCAGCTCAAATCTATTTTGCCTGCCTCTCGATTACAGAAAGATCAAAAGAATACTGAGCCTGGAGAACTCAGGGTT
GACTGATGTGTTCACTGTGGCTTATGCAAAAAGGTAGTTTAGTTTTTCTTCTTTGGGCCACCTCTTATTCCTGTTTGTTT
GGTGCATAAATGCATTGATTTTTGTTAACAAATTATCTCCAATTGAACTAATCTTTGCTAGCGTTTATTTAAAAATTCAG
CGTGATTGAAAGCAAACTAAAAACTAGCTTTGGGTTGTTCATGAAAGTTGCTTGGTCAATCATCACTTCGTCACTACATT
TGATATGTTTCAGTGA-TGACTAAAACTCAGAATTTCTACCCCCTCCGATCCATATTAATTGTCGCTGATTTAGTCAATT
TGATTAAATCAGCGACAATTAATATGGACCAGAGGAAGTAGTTCATTCAGTTGGCCTACCATGATCACTT----------
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----------------TAAATTGCATATTGTTATATTGGATGTGGACCATCTATTTCTTTACTGTGCTAGGCAGTAGGCA
CAACGTCATGCCTGGAATTGTGTCTGAGAATCGTTTGGGGTTAATGCTAACTGCAAAATGTGGAACTAGTAAAGATCTTA
GGATT-ACTTGTTTGCTCCCCATGTTTGCCCTACCAAAAATGTGGTTAGCCAATATTTTGGTTGAGGTTTTGCATGCCCG
TGAGTTGCCCAAAATTGGCTAGAAAAATGAACTAGAGTTGCGAAAGAGCATTGGCATGCCAAAAAGTTGGCAGTCATCCA
AACAAGGACCAATGTTTTGGCCATGACCGAAAA-TTCGGTAGGGTAGACATTGGTGGCAATTCGAACATACCCTTAAATC
TGCACAAAAAATGAACTCATTTTTCTTTTGCAAACTTTTTCTTGTTGG--------ACCTTTGTATCTCTGTTTCTTTCA
AACGGAGGGATTGCTTCATCTAAACAAACTGATTCATTTTTTTG-CATTCCATAGCAGATCTTGGCATCTCACCAAAGCC
TAGGCTCAGCTGACTTCTGCTGGAGAA-CAAGGTAGTAACTGAAGAATTGTAGTTGG---CAAGACTCAGGTGGCGGGTG
GCGCTGGAATGTGCAAAGGGCCCT--------------------------------------------------------
--------------------------------------
>SNPs
---S---------------------------------------------------------S------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------------------------------------------S-------------------
-----S-------S----------------------------S-------------------------------------
---S-----------------------------------------------------S----------------------
--------------------------------------S--------------------------------------SSS
SSSSSSSSSS---S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S---S------------S-----------SS-----------
---S-----------S--S-----------------------------------------------S-------------
----------S---------S--------------SSSSSSSSS--------------------------------S---
--------------------------------------------------------------------------------
----------------------SS-----------------------------------SSSSS-S-S--SSSSSSSSSS
SSSSSSSSSSSSSSSSSS-----------S------------S----------------------S------S-------
----------------------------S------S-------------------S-------------SS---------
-----S-S-------S-------------------------SS-S---S-------------------S-----S-----
------------S--S-----------------------S-----------------------------------S----
-------------------------------------------------------------------------------S
------S--S-----S---------------------------S--------------S---------------------
---------------------------------------S---S------------------------------------
--------SS--------------S-------------------------------------------------------
------------------------------------------------S-------------------------------
-----------------S--------------------------------------------------------------
-------------------SS--S------------------------------------------------S-------
--------------------------------------------------S-----------------------------
-----------------S--------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------------S---------------S-------------S------------S---------
-------------------------------------------------------------S------------------
S--------------------S--------------S----------S--------------------------------
-----------S----S-------------------SSS-----------------------------------------
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----------------S----S----------S-----------------------------------------------
----------------------------------------------S--------S------------------------
---------------------------S--------------------------------------------------S-
-------S----S-----------------------------------------------------------S-------
----------------------------S----S-----------S------------S----S----------------
------------------------------------S---S-------SSSSSSSS--------------S---SS----
--S----------------------------------------SS----S-------S----------------------
------S--------------------S------------------------S-S-SSSS--------------------
--S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_643
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---------------------------------------------------------------CAAATCCAGCACGCGTC
ATC-----------------------------------------------------------------------------
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>reverse_1770
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---------TCATTGTGCTAACACGGGGT---------------------------------------------------
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>forward_1200
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------------------------------------------------------------TGCTGTTTCGCATCCGTTTG
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>reverse_5418
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---------------------------------------------------------TAACAAGACTCAGGTGGCGG---
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