>input_sequence_55583
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---------------------------------------ATGCCTAGCTTGCCAATACTTTTTGTTTACT--ACTTTCAG
GTCCATATATCGACTGTTGGCCATGACGAGATGAGGGTGACATGGATCACTGAAGACGATGCACCGGCAGTCGTGGAGTA
CGGCACGACCTCAGGCCAGTACCCATTCTCAGCGACAGGAACCACCACGAGCTACTCGTACCTAGCCCTCTACCACTCGG
GGAACATCCACGACGCCGTCGTCGGCCCACTGAAACCCAGCACCACGTACTACTACCGGTGCAGCTCCGACCCGTCGCGC
GAGTTCTCCTTCCGGACGCCGCCGGCCAGCCTCCCCTTCACCTTCGTCATCGTCGGTACTGCATCGCATCACATCACATC
A-----AATGCTCTTCAGTTTCGCCTTATTTATTTCGGTCTCTGGTAGTTTCAT--GCTTCGGTGGGCGTCC--------
-------------------------------------------------------------TGCAGGTGACCTCGGACAG
ACCGGCTGGACCAAGAGCACGCTGCAGCACATCGCGGCCACCGACTACGACATGCTCCTCCTCCCCGGCGACCTGTCGTA
CGCCGATTTCCTCCAGCCGCGCTGGGACTCGTACGGCCGGCTCGTCGAGCCGCTGGCTAGCGCGCGGCCGTGGATGGTGA
CCGAGGGCAACCACGAGATCGAGAGGATCCCGCTCCTCGAGCCGCGTGCCTTCAAGGCCTACAACGCGCGGTGGCGCATG
CCGTACGACGCCGGCGACTCCCCGTCGGGGTCGAACCTCTACTACTCCTTTGACGTCGCGGGCGGCATGGTGCATGTCAT
CATGCTAGGCTCGTACACGGGCTTCGAGGCCGGCACGGCGCAGCACGAGTGGCTGCGGGGCGACCTCGCCAGGATCGACC
GCGGCAAGACGCCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACGAGGCGCACCAGGGGGAAGGCGAC
GACATGCGGGACGCCATGGAGGCGCTGCTCCGCGCGGCGCGCGTGGACGCGGTGTTCGCGGGCCACGTGCACGCGTACGA
GAGGTTCACGCGCGTCTACGGCGGCATGGAGGACCAGTGCGGGCCGGTGT------------------------------
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---------------------------------ACGTGACCATCGGAGACGGCGGGAACCGGGAAGGGTTGGCAGACGAG
TATATCGACCCACAGCCCAAGACGTCGGTGTTCCGGGAAGCGAGCTTCGGCCACGGCAGGCTGCAGGTGGTGAATGCGAC
AC------------------------ACGACGACGACCAGCCGGTGGTGGCCGACCAGGTGTGGATCGCCAGTCTCGCTT
CTAACCCGGATTGTAACAATCCAGCGGGAACGGGGGCTCAGGCCTGA---------------------------------
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-----------------
>chr5B_1_TraesCS5B01G127700
ATAGAGAATCAGCATACAGGATCGTGGACTTAAAGATTTTCCTTTCGGATGACTAGCAAATTGATTGCCCAGGTTTTTGT
ATTGTTTTTGAAGACCCCTTTAGAAGGAGGTGGATTAGCCATTTCTACTATTTACGTTCATTCTAGAACTGAGTGAGATC
GTATTAGTGCATGGAGTAAAAAGAAAAGAAGTCAATTTCCGTCCATTCCTTTAGGAACGGAGGGAGTGTTTTTTAGAATT
GGTGATCGCATAGAAACTACTTAGATTATTTTTTCTGCAACAATAGCAAATCAACATGAGAAAAAGATCAACAAAACTTA
GGTGGCTGTAGAGCCGATCTGAAGACTAAACCGGCATCTATGCAAGACGTGTTGGGTTGTGTGCATCTAGATCTAGCTAT
GATGATGCCTGATTTTTCAAGGTGTGCAAAACTCAACAGAAAACCAAAACCAGA---CAAAAAATCAAACTGAACCAACA
GTTTCTGTTTTTT-AGGTTTCAGTTTCAATTTTGAAATCTGAAAACCATCA---TTTCGGTTTTGTCGGTTAGAAACCAA
AAACCATTTGGTTAAACCAAATTAATCAAAATTGAGA-TTTTTTGGGTTCAAAAGCGTAATGAGCTGCTATAGTACAGTA
CTTTCTACCCCATTTAGTGCTTCAGTTTATATGATTATTAGTCTGACGGCTTATCCAACGCCCCTTCTATATTTCTTTCT
AATTGTTTTTTA-TCATTATGATATATATCATGTATTTACACGTGGAGTGATGTGTTTGCTCAAAATTCGCATCAACTTT
GGTTAGTTTTGTCATTACCGAAACCAAACCGAAAGTAAATGGTTATTACCAAAATCGAACTGTATCTATGTATAAAACCG
TAT-AGACCGAAGTATAAAAACCATATAAATTG--------------------------AACCGAAAAAACTGAAGGCAG
ACCCTGACTGATTTTGCATGTATTGACTGTACCGACCGG-----------------------------------------
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-TTGCGATGTTTGAGCAAACAAGAATTCC-ATTTTTGAAATGCCTAGCTTGCCAATACTTTTTGTTTACT--ACTTTCAG
GTCCATATATCGACTGTTGGCCATGACGAGATGAGGGTGACATGGATCACTGAAGACGATGCACCGGCAGTCGTGGAGTA
CGGCACGACCTCAGGCCAGTACCCATTCTCAGCGACAGGAACCACCACGAGCTACTCGTACCTAGCCCTCTACCACTCGG
GGAACATCCACGACGCCGTCGTCGGCCCACTGAAACCCAGCACCACGTACTACTACCGGTGCAGCTCCGACCCGTCGCGC
GAGTTCTCCTTCCGGACGCCGCCGGCCAGCCTCCCCTTCACCTTCGTCATCGTCGGTACTGCATCGCATCACATCACATC
A-----AATGCTCTTCAGTTTCGCCTTATTTATTTCGGTCTCTGGTAGTTTCAT--GCTTCGGTGGGCGTCC--------
-------------------------------------------------------------TGCAGGTGACCTCGGACAG
ACCGGCTGGACCAAGAGCACGCTGCAGCACATCGCGGCCACCGACTACGACATGCTCCTCCTCCCCGGCGACCTGTCGTA
CGCCGATTTCCTCCAGCCGCGCTGGGACTCGTACGGCCGGCTCGTCGAGCCGCTGGCTAGCGCGCGGCCGTGGATGGTGA
CCGAGGGCAACCACGAGATCGAGAGGATCCCGCTCCTCGAGCCGCGTGCCTTCAAGGCCTACAACGCGCGGTGGCGCATG
CCGTACGACGCCGGCGACTCCCCGTCGGGGTCGAACCTCTACTACTCCTTTGACGTCGCGGGCGGCATGGTGCATGTCAT
CATGCTAGGCTCGTACACGGGCTTCGAGGCCGGCACGGCGCAGCACGAGTGGCTGCGGGGCGACCTCGCCAGGATCGACC
GCGGCAAGACGCCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACGAGGCGCACCAGGGGGAAGGCGAC
GACATGCGGGACGCCATGGAGGCGCTGCTCCGCGCGGCGCGCGTGGACGCGGTGTTCGCGGGCCACGTGCACGCGTACGA
GAGGTTCACGCGCGTCTACGGCGGCATGGAGGACCAGTGCGGGCCGGTGT------------------------------
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---------------------------------ACGTGACCATCGGAGACGGCGGGAACCGGGAAGGGTTGGCAGACGAG
TATATCGACCCACAGCCCAAGACGTCGGTGTTCCGGGAAGCGAGCTTCGGCCACGGCAGGCTGCAGGTGGTGAATGCGAC
AC------------------------ACGACGACGACCAGCCGGTGGTGGCCGACCAGGTGTGGATCGCCAGTCTCGCTT
CTAACCCGGATTGTAACAATCCAGCGGGAACGGGGGCTCAGGCCTGAAGCATTTAACTCGATGTTGAATGGTATTGGATC
GGTATCGAATACTCTCAACTCTTGTACTCGTTCGTGGTTAAATAGTAATCTCACACGTGTAAATACAAATCTTTCTTCGG
ACTCGTAGAACATCTTTTTTTTTGAAGGCGGACTCGTAGAACATCTAGCGATGACTACAAGTATTGAAACGAGCCGAAGG
CACGCCGTCGTCATCGGCTCATCGCCCCTTCCTTTGCCGGTGCCAGACAAAACTTGTTGTAATAGATAGTTAAGAAGTGG
TCGTGCTAAGGGCTCATAAAACCAGCGCACTAGAACAGCAATCGCCGCCGACGAAGAGTCGCGTAAATCAGAAGGATCCA
ACGTGAAGACACGTGAACGTATACTCGATCCGAAT----TCCGAATAGATCCACCAAAGACAACCACCGACCGAATCCTG
CGAGATCCGCCGGAGACACGCCTGCAGACGGCCTCCGAAGATACTAGACGCATCACCAGGAT-AGGGCTAGGCCGGGAGA
ACCTGATTCCATCTTCAGAGAGCCGCCGCCGCCTCGC----CTTGCTGATCAAAACGCAAACCCTATAACATAACTCAAA
GTAATATCT-AAAAAGAAAGCCCTCCGCTGGCAAAAGCCGAGATCCATCGCGCAACCATGACCCTATAACCACCGAAGAC
GAGGTGAACCAGCGACAACGCTGGTAGGAGGCAGAGGAACCCTAAGCTTTTTTCGAGAGAAGGCGGCGGCTGCATATGAA
GGAGGCCGATTTTTTTTTTTTTGCAATCTAATATCTAAAATGTTCAAGTGGTAAGAATCTTTTTACATCAATATGATAAT
ACCTTATATAAAGGACAAAAATGAAAAATATTTAATTCATAATAATGATATAAAATAAGTCATGGCCAAAAGAAGTCATG
GCTTTGTTATCCTTTATTTGCAGAATATGTAACAAACCTTGTATTTCAAGTAGTGATTCAAGTTGAAGATTCATGTTACC
TATAATATCTAAATAAT
>chr5A_1
ATAAAGAATTGGCATACAGGATCGTGGACTTAAAGATTTTCTTTTCGGTTGACTAACAGATTGATTCCCCAGGTTTTTGT
TTTGTTTTTGAAGATCTCTTTAGAAGGAGGTGGATTAGCCATTTCTA--ATTTACGTTCATTCTAGAACTGAGCGAGATT
GTATTAGTGCATGGAGTAAAAAGAAAACAAGTCAATTA------------------------------TTTTTGAGAATT
GGTGATCGTATAGTAACTACTTAGATTATTGTTTCTACAACAATAGCTAATTAACATGAGAAAAAGATTAACAAAACCTA
GGTGGCTGTAGAGCCCATCTGAAGACTAAACCGGCATCTATACAAGACGTGTTGGGTTGTGTGCATCTAGATCTAGCTAT
GCTGATGCCTGATTTTTCAGGGTGTGCAAAACCGAACAGAAAACAAACAACCGAACCCAAAAAATCAAACTGAACTAATA
TTTTCGGGTTTTTCAGGTTTCGGTTTCAATTTTGAAATCTGAAAACCATTTGCGTTTCGGTTTTGTTTGTTAGAAACCAA
AAACCATTTGGTTAAACCAAATTAACTAAAATTGAGTTTTTTTTGGATTCAAAACCGTAATGGGCTGCTATAGCACAGTA
CTTTCTAGCCCATTTAGTGCTTCGGTTTATGTG---ATTAGTCTGACTGCTTATCCAACGTTCTTTCTATATCCCTTTCT
AATTGTTTTTTCCTCATTATGATATATATCATGTATGTACACGTGAAGTGATGTGTTTACTCAAAATCCACGTCAACTTT
GATTAGTTTTGTCATTACCGAAACCAAACCAAAAGTAAATGATTATTACCAAAACGGAACCGTATCTATGTATAAAACCG
TAT-AAACTGAAGTATAAAAACCATATAAATCATAAACCATATAAAATGAACCGAATCAAACCAACAAAACTGAAAGCAG
A-CCTGACTGATTTTGCATGTATTGACTGTATTGACCGGGGAATCGGATCCTCTAACATGAATGTTAGAGAAGCTACATT
ACGCTAACATTCCTTCTTTCTGTTCATATGATTAAGGGTAAAATGACTGAAATTAATTTATAGATTAATGATCTACTGTG
TACATTTATAGTAATGCTGTTCGACAATTGAGCATGCGCCACCGCGCGTTTTATACATATAGATAGGGTTCCACCGATCA
GATGCGATGATTGAGCAAACAAGATTTCCAATTTTCGAAATGCCTAGCTTGCCAATACTTTGTGTTTACT--ACTTTCAG
GTCCATATATCGACTGTTGGCCATGACGAGATGAGGGTGACATGGATCACTGAAGACGATGCACCGACAGTCGTGGAGTA
CGGCACGACCTCAGGCCAGTACCCATTCTCAGCGACCGGAACCACCACGAGCTACTCGTACCTAGCCCTCTACCACTCGG
GGAAAATCCACGACGCCGTAGTCGGCCCACTGAAACCCAGCACAACGTACTACTACCGGTGCAGCTCCGACCCGTCGCGC
GAGTTCTCCTTCCGGACGCCGCCGGCCAGCCTCCCCTTCACCTTCGTCATCGTCGGTACTGCATCGAATCACATCACATC
ACATCAAATGCTCTTCAGTTTCGCCTTACTTATTTCGGTCTCTGGTTTCATGCATGGCTTCGGTGGGCGTCC--------
-------------------------------------------------------------TGCAGGTGACCTCGGACAG
ACCGGCTGGACCAAGAGCAAGCTGCAGCACATCGCGGCCGCCGACTACGACATGCTCCTCCTCCCCGGCGACCTGTCGTA
CGCCGACTTCCTCCAGCCGCGCTGGGACTCGTACGGCCGGCTCGTGGAGCCGCTGGCGAGCGCGCGGCCGTGGATGGTGA
CCGAGGGCAACCACGAGATCGAGAGGATCCCGCTCCTCGAGCCGCGTACCTTCAAGGCCTACAACGCGCGGTGGCGCATG
CCGTACGACGCCGGCGACTCCCCGTCGGGGTCGAACCTCTACTACTCCTTCGACGTCGCGGGCGGCATCGTGCCTGTCAT
CATGCTGGGCTCGTACACGGGCTTCGAGGCCGGCACGGCGCAGCACGAGTGACTGCGGGGCGACCTCGCCAGGATCGACC
GCGGCAGGACGCCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACGAGGCGCACCAGGGGGAGGGCGAC
GGCATGCGGGACGCCATGGAGGCGC----------GGCGCGCGTGGACGCGGTGTTCGCGGGGCACGTGCACGCGTACGA
GAGGTTCACGCGCGTCTACGGCGGCATGGAGGACCACTGCGGGCCGGTTACTGTTGGAAATTCGTCCACGATCGATCACA
TCAAATCACATGAACACATGCCCACAGAAAATTGATGGCCAAAGGCACGGGTCGTGCCTTGTTTTTTTTTCTTTATTGAT
TTTCTGGTTTGCTCCATGATGTTACAATCTGATGCACCGATGTGCATATATATAAACGACCTCACGAGCTAGCTAGCTAA
CCTAAACCGATTCAAACAACTGCTCTTAGCTGGATTCACGTTGGAACCTAACTAGGACACGGGCAGCATGCTAATTCTAA
ATACTAGACGGCTTGCAAACCGACCACTCCACGTACATCTCAACTTACCTACTTAATTACCCGGCCAGCTTGATCACGAT
TACACAAAACTAACTCAAGCATTATTTGGATTATCCCAACAATCACCCCCTAATCCAAACATCCGACTCTTTATCCAACG
AGACACGCAGACGATCACCTCTTCATCTTGTCCCGCTGATTGCCTTCGGTGACGCGACGTACCGGGCCACAACTTCTCTC
CTTGTAATGATGGCCACCACTTGATCACCATCTTTTTCATGCCGACTTGTAGACTGAAAACAACGATTATCCGGACTACC
AGCCACGCTGCCACATCTTAGCGTGCTACATGCAGACTAAACGCATAGCCTTATGCAGGAACTCAACTTAACTGGTGCGC
GTCCATCTTCACGTTGATCTTCATCTTCTCGTCGACTACTTGCACACGGGAACACACATCTATTCACCCGCCACATCTTT
TTTTCTTTATCATTGGTGACACAACTTACCAAACGACACCTCCTGTCCAGCGGCAACACAACTCGCCATATACGTGCAAC
TCATCTCCACCGTATACGAACTCGCCGGAACTCCTTGATCACGAACGGAAACGCAAGGCACAAATTTCTTTTTCCATCTG
CTCTCGCTCTCAATTCTCCTCCGCCAGTGACGCGTCTCAACTGCAGCAGAAGACTTACACACCTGAGATCTTGGACGCAC
CTTACAAGAACTCATGTGCACACCTTGATGATGGCTCGCAACTTCGCCATCTCCACCTTGCACCCTCCAACGATGATCTC
GATGATTTTCTCGGTGTTGCAACTTTGGCACCTCCATAACCATCAACGACCACCAACGCCTTGCCGATGACAGCCCTGTT
GCTTCGCTTGCGACAGCGTCATCGCCGCCTTCTTGTCGCCGCTCCGCCGAACGACAACTGCCCGATCCTCCTTGTCGCCG
CTCGAACGACAATTGTCTGCTCCTCCTCGTCACTGCATCCCAGCGACTATATCGCCCGCTCCTCGTTGTCGCTACACCAG
CGACTGTATCGCCTGCTCCTCTCCATTGCTACAACAACGACTCTATTGCCCGCCCCGAGGCGCTAGCAGGGTCGCCACCC
CGGGGCAAGCGCAGCTTGACTCAAACCTTGCTCTGATACCAATTATTGGAAATTTGCCCACAGGATCGATCACATCAAAT
CACACGAACACACGCCCACAGAAAATTGATGGCCAAAGGCACGTGTCGTGCCTTGTTCTTTTTTCTTTATTGATTTTCTG
GTTTTCTCCACGATGTTACAATCTGATGCACCGATGTGCATATATATAAACGACCTCACGAGCTAGCTAGCTAACCTAAA
CCGACTCAAACAACTGCTCTTAGCCGGATTCACGTTGGAACCTAACTAGGACACGGGCAGCATGCTAATTCTAAATACTA
CACGGCTTGCAAACCGACCACCCCACGTACATCTCAACTTACCTACTTAATTACCCGGCCAGCTTGATCACGATTACACA
AAACTAACTCAAGCATTATTTGGATTATCCCAACAATCACCCCCTAATCCAAACATCCGACTCTTTATCCAATGAGACAC
GCAGACGATCACCTCTTCATCTTATCCCGCTGATTGCCTTCGGTGACGCGACGTACCGGGCCACAACTTCTCTCCTTGTA
ATGATGGCCACCACTTGATCACCATCTTTTTTATGCCGACTTGTAGACTGAAAACAACGATTATCCGGACTACCAGCCAC
GCTGCCACATCTTAGCGTGCTACATGCAGACTAAACGCATAGCCTTATGTAGGAACTCAACTTAACTGGTGCGCGTCCAT
CCTCATGTTGATCTTCATCTTCTCGTCGACTACTTGCACACGGGAACACACATCTATTCACCCGCCACATCTTTTTTTCT
TTGTCATTGGTGACACAACTTACCAAACGACACCTCCTGTCCAGCGGCAACACAACTCGCCATATACGTGCAACTCATCT
CCACCGTATACGAACTTGCTGGAACTCCTTGATCACGAACGGAAACGCAAGGCACAAATTTCTTTTTCCATCTGCTCTCG
CTCTCAATTCTCCTCCGCCAGTGACGCGTCTCAACTGCAGCAGAAGACTTACACACCTGAGATCTTGGACGCACCTTACA
AGAACTCATGTGCACACCTTGATGATGGCTCGCAACTTCGCCATCTCCACCTTGCACCCTCCAACGATGATCTCGATGAT
TTTCTCGGTGTTGCAACTTCGGCACCTCCATAACCATCAACGACCATCAACGCCTTGCCGATGACAGCCCTTCCGCCTCG
CTTGCGACAGCGTCATCGCCGCCTTCTTGTCGCCGCTCCGCCGAACGACAACTGCCCGATCCTCCTTGTTGCCGCTCGAA
CGACAATTGTCTACTCCTCCTCGTCGCTGCATCCCAGCGACTATATCGCCCGCTCCTCGTTGTTGCTACACCAGCGACTT
TATCGCCTGCTCCTCTCCATTGCTACAACAACGACTCTATTGCCCGCCCCGAGGCGCTAGCAGGGTCGCCACCCCGGGGC
AAGCGCAGCTTGACTCGAACCTTGCTCTGATACCAATTGTTGGAAATTCGCCCACAGGATCGATCACATCAAATCACACG
AACACACGTCCACAGAAAATTGATGGCCAAAGGCACGTGTCGTGCCTTGTTCTTCTCCTCTTTATTGATTTTCTGGTTTT
CTCCACGATGTTACAATCTGATGCACCGATGTGCATATATATAAACGACCTCACGGGCTAGCTAGCTAACCTAAACCGAC
TCAAACAACTTCTCCTAGCCGGACTCACGTTGGAACCTAACTAGGACACGGGCAGCATGCTAATTCTAAATACTACACGG
CTTGCAAACCGACCACCCCACGTACATCTCAACTTACCTACTTAATTACCCGGCCATCTTGATCACGATTACACAAAACT
AACTCAAGCATTGTTTGGATTATCCCAACATACACGTGACCATCGGAGACGGCGGGAACCGGGAAGGACTGGCGGATGAG
TATATGGACCCACAGCCCAAGACGTCGGTGTTTCGGGAAGCGAGCTTCGGCCACGGCAGGCTGCAGGTGGTGAATGCGAC
ACTCGCGTTGTGGACGTGGCACCGGAACGACGACGACCAGCCGGTGGTGGCCGACCAGGTGTGGATCACCAGTCTCGCTT
CTAACCCGGATAGTAACAATCGAGCGGGAGCGAGGGCTCGGGCATGAAGCCTA-AACTCGCCGTTGAATGGTGCTGGATT
GGTATCGGAT----------------------------------------------------------------------
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>chr5D_13
------------CATACAGGATCGTGGACTTAAAGATTTTCTTTTCGGTTGACT--------------------------
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--------------------AAACCATATGGAAAGTAAATGGTTATTACCAAAC-CGAACCTTATATATGTATAAAACCA
TACAAAACCGAAGTATAAAACC-ATATAAATCATAAACCATATAAATTGAACCGAATCAAACCGA-AAAACTGAATGCAG
ACCCTGACTGATTTTGCATGTATTGACTGTACTGACCGG-----------------------------------------
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-ATGCGATGATTGAGCAAACAAGATTTCCAATTTTCGAAATGCCTACCTTGCCAATACTTTTTGTTTACTATACTTTCAG
GTCCATATATCGACTGTTGGCCATGACGAGATGAGGGTGACATGGATCACTGAAGACGATGCACCGGCAGTCGTGGAGTA
CGGCATGACATCAGGCCAGTACCCATTTTCAGCGACCGGAACCACCACGAGCTACTCGTACCTAGCCCTCTACCGGTCGG
GGAACATCCACGACGCCGTCGTCGGCCCACTGAAACCCAGCACAACGTACTACTACCGGTGCAGCTCCGATCCGTCGCGC
GAGTTCTCCTTCCGGACGCCGCCGGCCAGCCTCCCCTTCACCTTCGTCGTCGTCGGTACTGCATCGAATCACATCACATC
A-----AGTGCTCTTCAGTTTGGCATGATTTCTGTCCCTG-------GTTTCAT--GCTTCGGTGGGCGTCC--------
-------------------------------------------------------------TGCAGGTGACCTCGGCCAG
ACCGGCTGGACCAAGAGCACGCTGCAGCACATCGCGGCCGCCGACTACGACATGCTCCTCCTTCCCGGCGACCTGTCGTA
CGCCGACTTCCTCCAGCCGCGCTGGGACTCGTACGGCCGGCTCGTCGAGCCGCTGGCGAGCGCGCGGCCGTGGATGGTGA
CCGAGGGCAACCACGAGATCGAGAGGATCCCGCTCCTCGAGCCGCGTGCCTTCAAGGCCTACAACGCGCGGTGGCGCGTG
CCGTACGACGCCGGCGACTCCCCGTCGGGGTCGAACCTCTACTACTCCTTCGACGTCGCGGGCGGCATGGTGCATGTCGT
CATGCTAGGCTCGTACGCGGGCTTCGAGGCCGGCACGGCGCAGCACGAGTGGCTGCGGGGCGACCTCGCCAGGATCGACC
GCGGCAGGACGCCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACAAGGCGCACCAGGGGGAGGGCGAC
GACATGCGGGACGCCATGGAGGCGCTGCTCCGCGCCGCGCGCGTGGACGCGGTGTTCGCGGGGCACGTGCACGCGTACGA
GAGGTTCACGCGCGTCTACGGCGGCATGGAGGACCAGTGCGGGCCGGTGT------------------------------
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---------------------------------ACGTGACCATCGGAGACGGCGGGAACCGGGAAGGGCTGGCGGACGAG
TATATCGACCCACAGCCCAAGACGTCGGTGTTCCGGGAAGCCAGCTTCGGGCACGGCAGGCTGCAGGTGGTGAATGCGAC
ACACGCGCTGTGGACGTGGCACCGGAACGACGACGACCAGCCGGTGGTGGCCGACCAGGTGTGGATCACAAGTCTCGCTT
CTAACCCGGATTGTAACAATCGAGCGGGAGCGGGGGCTCAGGCCTGAAGCATTTAA------------------------
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>chr5A_1028
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------------------------------------------------------------------TACA--ACTTTCAG
GTGCATGTGTCGGCTGTGGGCCCTGACAAGATGAGGGTGACATGGATCACCGACGACGACGCACCGGCGACGGTGGACTA
CGGCACGGCTTCAGGCCAGTACCCCTTCTCCGCCACCGGAACCACCGCCGTTTACTCCTACCTCTTG---TACCACTCGG
GGAACATCCACGACGCCGTCGTCGGCCCACTGAAACCCAGCACCACCTACTACTACCGCTGCAGCTCCGACACGTCGCGG
GAGTTCTCCTTCCGAACGCCCCCGTCAGTCCTCCCCTTCACCTTCGTCATTGCCGGTAATG-------------------
----------------------------------TCCCTG-------CATGCAT--CTTGCCGTTAGAGTCTCAGTTTTT
CCGTTTC-AGTTTTCAAAGTCTCATA-----------CAATGGAATGCGGACGCGCATCCATGCAGGCGACCTGGGCCAG
ACGGAGTGGACCAACTCCACGCTGCAGCACATCGCCGCCGCCGACTACGACATGCTGCTCCTGCCCGGCGACCTGTCGTA
CGCCGACCTGGACCAGCCGCGCTGGGACTCGTACGGACGCCTGGTGGAGCCCCTGGCGAGCGCGCGGCCCTGGATGGTGA
CCGAGGGCAACCACGAGGTGGAGAAGATCCCCCTCATCGAGCGCCACCCCTTCAAGGCCTACAACGCGCGGTGGCGCATG
CCGTACGACGCCGGCGCCTCGCCGTCGGGGTCCAACCTCTACTACTCCTTCGACGCGGCCGGCGGCGCCGTGCACGTCAT
CATGCTGGGCTCCTACACCGACTACGACGCCGGCACGGCGCAGCACAGGTGGCTGCAGGCCGACCTCGCCGGGGTCGACC
GCGGGAAGACGGCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACAAGGCGCACCAGGGGGAGGGCGAC
GGCATGCGCGACGCCATGGAGGCGCTGCTCTACGGCGCCCGCGTGGACGCGGTGTTCGCCGGGCACGTGCACGCCTACGA
GAGGTTCGCGCGCGTCTACGGCGACAAGGAGGACCAGTGCGGGGCGGTGT------------------------------
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---------------------------------ACGTGACCATCGGAGACGGCGGCAACCGGGAAGGGCTGGCGGAGAAG
TACATCGACCCGCAGCCCAAGACGTCGGTGTTCCGGGAGGCCAGCTTCGGGCATGGCAGGCTGCAGGTGGTGAACGTGAC
GCACG---------------------------------------------------------------------------
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>chr5D_1032
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------------------------------------------------------------------------ACTTTCAG
GTGCATGTGTCGGCTGTGGGCCCTGACAAGATGAGGGTGACATGGATCACCGACGACGACGCGCCGGCGATGGTGGACTA
CGGCACGGCTTCAGGCCAGTACCCCTTCTCCGCCACCGGAACCACCGCCGATTACTCCTACCTCATG---TATCACTCTG
GGAACATCCACGACGCCGTCGTCGGCCCACTGAAACCCAGCACCACCTACTACTACCGGTGCAGCTCCGACCCGTCGCGG
GAGTTCTCCTTCCGAACGCCCCCGTCAGGCCTCCCCTTCACCTTCGTCATCGCCGGTAATGCATC---------------
---------------------------------------------------------TTGCCGTCAGAGTCTCAGTTTTT
CCGTTTAAAGTTTTCAAAGCCGCATGCATAATGCTACCAATGGAATGGGGACGCGCA----TGCAGGCGACCTGGGCCAG
ACGGAGTGGACCAACTCCACGCTGCAGCACATCGCCGCCGCCGACTACGACATGCTGCTCCTCCCCGGCGACCTGTCGTA
CGCCGACCTGGACCAGCCGCGCTGGGACTCGTACGGCCGCCTGGTGGAGCCCCTGGCGAGCGCGCGGCCCTGGATGGTGA
CCGAGGGCAACCACGAGGTGGAGAAGATCCCCCTCCTCGAGCGCCACCCCTTCAAGGCCTACAACGCGCGGTGGCGCATG
CCGTACGACGCCGGCGCCTCGCCGTCGGGGTCCAACCTCTACTACTCCTTCGACGCGGCCGGCGGCGCGGTGCACGTCAT
CATGCTGGGCTCGTACACCGACTACGACGCCGGCACGGCGCAGCACACGTGGCTGCAGGGCGACCTCGCAGGGGTCGACC
GCGGGAAGACGCCGTTCGTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACAAGGCGCACCAGGGGGAGGGCGAC
GGCATGCGCGACGCCATGGAAGCGCTGCTCTACGGCGCCCGCGTGGACGCGGTGTTCGCCGGGCACGTGCACGCCTACGA
GAGGTTCGCGCGCGTGTACGGCGACAAGGAGGACCAGTGCGGGCCGGTGT------------------------------
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---------------------------------ACGTGACCATCGGAGACGGCGGCAACCGGGAAGGGCTGGCGGAGAAG
TACATCGAGCCGCAGCCCAAGACGTCGGTGTTCCGGGAGGCCAGCTTCGGGCATGGCAGGCTGCAGGTGGTGAACGTGAC
GCACG---------------------------------------------------------------------------
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>chr2A_2430
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------TCGTAAACCATCTAGCGACAACTACACACACTGAAGCGAGCGGAAAG
CGCGCCGCCGTCATCG---------CCCCTCCCTCGCCGGAGCCGGGCACAACTTGTTGTAGTAGACGGTCGGGAAGTCG
TCGTGCTAAGA-CCCATAGGACCAACGTGCCAGAACAACAACGACCGCCTATAAAGAGAAGTTTAGATCGAAAGGAACCA
ACCCGAAAACACATGAACAAAGACGAA-CAAGGACCAGATCCGAGCGGATCCACCAAAGACAAACACCGACCGAATCCTG
CGAGATCCGCCGGAGACACACCTCCACACGTCCTCCGACGATGCTAGACACAACATCAGGGCGGGGGCTAGGCGGGGAGA
ACCTTATTCCATCTTCAAGAAGCTGCCGCCGTCTCAT----CTTCTTGAGCAGGACACAAATCCTA--GCAAAACTTGAA
GAAGCATCTAAAAACGAAGCCCTCCTGCCGACGAGGACCGGGATCCACCACGCACCCATGGCCCTAAGGCCACAGAAGAC
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>chr6D_2431
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------CGTAGACCACCTAGCGAAGACTACAAGCACTGGAGCGGGTCGAAGG
CGCGCCGCTGTCATCA---------CCGCTCCCCCATTGGAGCCAGGCAAACCTTGTTGTACTAGACAGTCGGGAAGTCA
TCGTGCTAAGGCCCCATAGGACCGACGCACCAGAACAGCAACCGCTGTCGATGAAGAGAAGCGTAGATTGAAAGGATCCA
ACCTGTAGACATATGAACATAGACGAAGCAAAGACCGGATCCATGTGGATCCACCGAAGACAAACACCGACCGAATCCCA
CGAGATCCGCCAGAGAAAAACCTCCACACGCCCCCCGACGATGCTAGAAACACCATCGGGACAAGGGCTAGACGGGGAGA
ATCTTATTCCATCTTCAGAGAGCCGCCGCCGCCATCGCCTTCTCTCCAAGCAGGACACAAACCCTA--ATAAAACTCAAA
AAAGTATCAAACAATGGAGCCCTCCCGCCGGCAAAGGCCGGGATCCATGGCGCCTCCATGGCCCTAAGAC-ACAGAAGAT
GAGGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>chr3B_2431
--------------------------------------------------------------------------------
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----------------------------------CGTAGACCACCTAGCAACGACTACAAGTACTGGAACGAGCCCAAGG
CAGGCTGCCATCATTG---------CCCCTCCCTCATCAGAGCCGGGCAAACCTTGTTGTAGTAGACCGTTGGAGAGTCG
TCATGCAAAAGCCCCATA-GACCAGCGCACCAGGATAGCAACCACCGCTGATGAAGAGATGTGTACATCAGAAGGATCCA
ACCTGTAGACACATGAATACAAACGAA-CGAAGATCGGATCCACGTGGATCCATCGAAGACAAACGTCGACCGGATCCCG
CGAGATCCAATGGAGATAAACCTCCATACGCCCTCCGATGATACTAGAAACACCACCAGGACGGAGGCTAGGCAGGGAGG
ACCTTATTCCATCTTCAGAGAGCCGCCGCCGCCTCGC----CTCTCTAAGCAGGACAGAAACCCTA--ACAGAACTCAAA
AAACCATATGAAAACGAAGCCCTCCCGCCGGCAAGAGCCGGGATCCACCATGCTTTCATGACCCTAAGACCATAGAAGAC
GAG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>chr5D_2432
--------------------------------------------------------------------------------
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-----------------------------------GTAGACCACCTAGCGATGACTACTTGCATTGGAGCAAGCCGAAGG
CGCGCCGCCGTCTTCA---------CCCCTCCCTCATCGGAGCTGAGCCAACCTTGTTGTAGCAGACAGTCGGGAAGTCG
CCGTGCTAAGGCCTCATAGGACCAGCGCACCAGAATAGCATCCGCCGCTGATGAAGAGAAGCGTAGATCAGAAGGATCCA
ACTTGTAGACACATGAACATAGCCGAA-CGAAGACAAGATCCACGTGGATCTACCAAAGACAAACGCCGACCGAATCCTG
CGAGATCCGCCGGAGACAAACCTCCACATGCCCTCCGACGATGCTAGAAACAACACCAGGACGGGGACAAGGCGGGGAGA
ACCTTATTCCATCTAAAGAGAACCACTGCCGCCTCGC----CTCTCTGAATAAGATACAAACCCTA--ACAAAACTCG--
--AGTATTAAAAAATGAAGCCCTCCCACTGACAAGGGCCAGGATCCACCATGCCTCCATGGCCCTAGGACCACAGAAGAC
GAGGTAGACCGGCGACGGCACCGGCGGGAGGCACGAGAAACCCTAGGC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>chr2A_2433
--------------------------------------------------------------------------------
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------------------------------------TAGACCACCTAGCGACGACTACTAGCACTGGAGCGAGCCGAAGG
CGCGCCGCCGTCTTCA---------CCCCTTGCTGATCGGAGCCGGACAAACCTTGTTGTAGTAGACAGTCGGGAAGTCG
TCGTGCTAAGGCCCCATAGGACCAACGCG------CAGCAACCGCCGTCGATGAAGAGAAGCGTAGATCGGAAGGATCCA
GCCTGTAGACACAGGAACACAGACGAA-CGAAGACAAGATCCACGTGGATCCACCAAAGACAAACGCCGACCGAATCCCG
CGAAATCCGCCGGATACAAACCTCCACACGCCCTCTAACGATGCTAGAAACACCACCAGAACGGGGACAAGGCGGGGAGA
ACCTTATTCCATCTTCAGAGAGCCGCCGCCGCCTCGC----CTCTCTGAGCAGGACAAAAACCCTA--ACAAAACTCAAA
AGAGCATGAAAAAACGAAGCCCTTCCGCCGGTAAGGGCCGGGATCCACCACGCCTCCATGGCCCTAAGACCACATGAGAC
GAGGTAGACCGGCGGCGGCACCGGCGGGAGGCACAAGAAACCCTA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>SNPs
---S-----SS------------------------------S------S------S--S-------S-------------
S-------------S-S------------------------------SS------------------------S-----S
---------------------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------
--------S----S----------------S-----S----------S---S----------------S--------S--
---------------S-------------------------S--------------------------------------
-S-----------------S------------SS----------S--S-S-S-----------------------S--S-
S----S-S-------------S---------------------------SS---------------SS------------
-------------------------SS---------S---------S-------S-------S----------S------
-------S---------------S------S--SSS-----------S------------SS-S--------SS------
-----------S------------------------S--------S------------S--------S-S-S--------
-S----------------------------------------------------S-----S-------------------
-----S-------------------------SS--------------------------------S---------S----
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-------S--------------S----------S--------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
------S--------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------S----S------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---------------------S-------S------------------------------SS----------SS-----S
-------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---------------------------------------
-------S--------SSSSSSSSS---S---S-S-----S--------------------S----S----SS-----S-
-----------S------SS----------S----------S---------S------SS-----S--------------
--S---------S-----S--S--SSSSSSS-S-----------S-S----------------S----------------
-------------------S---S--S---S-------S----------S--S--------S-----------S------
----S---------------------------------------S----S---S--S---------SS---S--------
-S-S----------S---SS--S-----------------S-------------S-----------SS-----S------
-----SS---S-----SS-S-S--SS-------S-S---S--SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS
>forward_701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TCTGACGGCTTATCCAACGC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>reverse_5828
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GCCAGTCTCGCTT
CTAACCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>forward_1397
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CAGTACCCATTCTCAGCGACA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>reverse_6630
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CTGCATATGAA
GGAGGCCGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
