>input_sequence_55582
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------------------------------------------------------------ATGGCGTTGGGCGTGGTGGT
TGGCGCCGCGGTTGTCGCAATGTGGCTACTGGCCGGTGAGGCGCGAGGCCAGGCGCAGCTCCAGGTAGGGTTCTACGCGC
ACTCGTGCCCCCAGGCGGAGGTGATCGTCAGGGACGAGGTCGGCAGGGCCGTCAGCGCCTACCCCGGCTTCGCCGCCGGC
CTCGTCCGCCTCCACTTCCACGACTGCTTCGTCAAGGTTCGTACTCACCTATCT-------------ACTAGCCAGTATG
AAATGCAGGTTGCA--ATGCAGGCGTGCGCTCCA------TTGAGAATGTCGGTGATGTATTGACGCGCGGTTGACTGGT
TTC--TGTCAGGGCTGCGACGCGTCTGTGCTGCTGGACTCGACGGCCAACAGCACCGCGGAGAAGGACGCCCCGCCCAAC
AAGAGCCTGAGGGGGTTCGAGGTCATCGACGCCGCCAAGAAGCGCCTCGAGGCCGCGTGCGCCGGGACCGTCTCCTGCGC
CGACATACTCGCCTTCGCCGCACGAGACAGCGTCGTCCTGGTAAGTACGGCGACAAGGCTCATATTGCTGTGAGC-----
---------CTATGTCGACACTGCTTTTTTTTTTTTTGGCTCTGCTTACACACCGTCAATGGCGACAATGGCAGGCCGGC
GGTAGCCCGTATGGCGTCCCGGCCGGGCGGAGGGACGGCAACGTGTCGGCGGCGTCCGACGCGCAGGCCAGCCTGCCCCC
ACCCACGGCGAATGTGGCCCACCTCACGGAAGCCTTCGCCAAGAATGGGCTTTCCCAGGAGGACATGGTCACGCTTTCAG
GTACCTAGC---------------CCAC------------AGCCCAACTCACATCGACAACTTCAGGCGGCCCGTGACAA
TTTTTTACC-CTCTCTGCGTTTCTCATTTGTATACGTTCAGGCGCGCACACGATCGGCGTGACGCACTGCAGCTCCTTCA
GCGCGCGGCTGCACGGGTACAACGCCACCACGGGCACGGGCCAGGACCCGGCCATGGACGGGGCCAAGGCGGCGGAGCTG
GCGCGGCAGTGCTCACCGGGGAGCCCGAACGCGGTGCCCATGGACGCCGGCAGCCCAGACACGTTCGACACGGGCTACTT
CCGCGCCCTGCTGGCCAACCAGGGCGTCCTCGCCTCCGACCAGACGCTCACCTCCGACAACGCCACGGCGGCGCTCGTGG
CTCAGAACGCCGGCAACGTCTACCTGTTCGTGACCAGGTTCGGCGACGCCATGGTGAGGATGGGTGGCATCCGGGTGCTC
ACCGGCGGCGACGGCCAGATACGCACCAACTGCAGGGTCGTGAACTGA--------------------------------
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--------------------------
>chr4D_1_TraesCS4D01G342500
TGATTATTATTCCCTCGTCGTGTAAACACACAGTCACAAACGCATATATGTCATACCTGACCTCAGTCCTCAAGGCAACT
ATCAAATGAGTAAGTACAAAATCCACCACCGTGCTGCCGTGCAATTTACAGGCCTATATGAACATATTTGTACCACCAAT
CTACCATGAGATGACCTGCAAAACTACGAGGGTGTTTGTTTCCAGGGACTTATTGGTTTAGGGACTTAAAAAAGTCCCTA
TAAGTCCCATCTAAACCAAACAGGAGGGACTTATAGGGACTTAAAGTGGGTATTTGGGACTTATGAAATAAGACTCTCAA
GGAGAGTCTTGAGAGTCTTATAGGGACTTATAGTTGTAAAATGGTCTTTTAGTCCATGTTAAGTCCCAAGAACCAAACAG
GTAGGGACTTTTTAGGGACTTGGGGCTTATAAGTTGGGACTAAAAAAAGTCCTAGGACTTATGAACCAAACAGGGCCTAC
ATCGATCACCGCACCCCAGATGACCCTTGTCATTTCTGTAACGTTTCCGAGATTAGTCTCTCCGTGTTCTGCTACGCTCC
GTCCGCATCGATCACAGCGGACAACCAGATTTGATGCCTTGATCGCCCCACAAGCAAACTCCAGTTTGTA---ATTCGTA
AACATGAGCCAGTTTGGCCCTTGGAAACCGCAGTGGAGCG---GAAGAAAACACGAGA--CCCCTGATTTGCCGGCTACT
TGCGCGTACGGCTGCACCCACTACTGGCTAATCCCAAAGCCAGCAATGCCCCAAAATCTTGGCCGTGTTTCTAGCCAGCC
TCCACATGCCTATCTATCAGTT----ACTGACTTGATTAGTGAAAGTAGCACCACACTGCCGAA----CTGCCCATTTGC
TGACCAGAGTAATTTACTAGCTAGTGCGCTCCTTGACACGATTTGCTCCCTATAAATTTCACCTCACCGTGCAGATTTTG
ACGCAGCGGTCTCGGTTCGTCTACCTAGCTAGCTACTGCA---AA-TTGACAGTGGTCTCATGGCGTTGGGCGTGGTGGT
TGGCGCCGCGGTTGTCGCAATGTGGCTACTGGCCGGTGAGGCGCGAGGCCAGGCGCAGCTCCAGGTAGGGTTCTACGCGC
ACTCGTGCCCCCAGGCGGAGGTGATCGTCAGGGACGAGGTCGGCAGGGCCGTCAGCGCCTACCCCGGCTTCGCCGCCGGC
CTCGTCCGCCTCCACTTCCACGACTGCTTCGTCAAGGTTCGTACTCACCTATCT-------------ACTAGCCAGTATG
AAATGCAGGTTGCA--ATGCAGGCGTGCGCTCCA------TTGAGAATGTCGGTGATGTATTGACGCGCGGTTGACTGGT
TTC--TGTCAGGGCTGCGACGCGTCTGTGCTGCTGGACTCGACGGCCAACAGCACCGCGGAGAAGGACGCCCCGCCCAAC
AAGAGCCTGAGGGGGTTCGAGGTCATCGACGCCGCCAAGAAGCGCCTCGAGGCCGCGTGCGCCGGGACCGTCTCCTGCGC
CGACATACTCGCCTTCGCCGCACGAGACAGCGTCGTCCTGGTAAGTACGGCGACAAGGCTCATATTGCTGTGAGC-----
---------CTATGTCGACACTGCTTTTTTTTTTTTTGGCTCTGCTTACACACCGTCAATGGCGACAATGGCAGGCCGGC
GGTAGCCCGTATGGCGTCCCGGCCGGGCGGAGGGACGGCAACGTGTCGGCGGCGTCCGACGCGCAGGCCAGCCTGCCCCC
ACCCACGGCGAATGTGGCCCACCTCACGGAAGCCTTCGCCAAGAATGGGCTTTCCCAGGAGGACATGGTCACGCTTTCAG
GTACCTAGC---------------CCAC------------AGCCCAACTCACATCGACAACTTCAGGCGGCCCGTGACAA
TTTTTTACC-CTCTCTGCGTTTCTCATTTGTATACGTTCAGGCGCGCACACGATCGGCGTGACGCACTGCAGCTCCTTCA
GCGCGCGGCTGCACGGGTACAACGCCACCACGGGCACGGGCCAGGACCCGGCCATGGACGGGGCCAAGGCGGCGGAGCTG
GCGCGGCAGTGCTCACCGGGGAGCCCGAACGCGGTGCCCATGGACGCCGGCAGCCCAGACACGTTCGACACGGGCTACTT
CCGCGCCCTGCTGGCCAACCAGGGCGTCCTCGCCTCCGACCAGACGCTCACCTCCGACAACGCCACGGCGGCGCTCGTGG
CTCAGAACGCCGGCAACGTCTACCTGTTCGTGACCAGGTTCGGCGACGCCATGGTGAGGATGGGTGGCATCCGGGTGCTC
ACCGGCGGCGACGGCCAGATACGCACCAACTGCAGGGTCGTGAACTGACTTGCGGCCGAAATCTCTCTCTCTCTCTCTCT
TTTTCGCTTACACTTTACGTCACTCTGAATCTGTAGTATCTTTTTGGCCGGCCTTGCAAA-TGCAGTGGAGTTATACATG
AATTGAGTTTC----GAACACGTACATTGCGTTGCGCGTGAGAGATGTGTGGTGTGCA-----AGATCTTCCTTTCTCTC
TTGATAGGAAAGAGCTTCCAAAAACTGTACTGCGAGCTTTTGGCAAAGCGTGCGCCTGCTTTAGTTATTGGGGTGATGGG
TGACGCGCGCATGGATCGGGCACGCTGTAGACGTGCTTTTGTCATGTGTCGAGCAACCCTGGGCGCCTACCTAACAGCCT
GGG-TTACCCTGATTAGAAAACAAGAAGAAACCTAACAACAA-CCGGGCAAAGATTCATCAGGTT----TAGTGTTTGCT
GAACCGGACAACCAAGTTGGTAACAAGAATAG------------------------------------------------
------------------------------------------------------------------------TCTAGTTT
GAGTTTGTCTTCTTAATTATAAGAGG----TGGAAATGGGCACGATGAAAGAAAGGCGATGAACTAA----CCTTTGGGA
CGGAGCCGGGAAAGTAGGGATGAGCACAGGACAGGGCTAAGAAAGAAGCTGCTAGATGGATGGAGCCAATTCTCGCTTTT
TT-TTCAGGAAATATTATCAACTATCCACTCATGAGGCTAGCA--------TTTCTTATTGCCAGGAGGAGACTCGTTGC
ATGCTGTAGTCGCCTCTTTAGTCCTCATTAAGCAAGTCCATGATGTC-------------------------TTTTGTGT
GAATTAAGTTCCATGTCCTCTTTTCTTCATGGTGGCTGGTCCATATATCATGATTCAGTGTTTATCAAAGAACAATAATC
ATGATTCAGTGAATCCACTCAGATACAAAAAAGAGAAAAAGAAAAACAGTTAGGCAGATCCAATTCATGAAATCACTTTG
ATCCAACGGTCTCCAAGGTTCTGCACTCGACACATTTAGCACTGAGCATTAACGAAACGAAGCTCCGCTAACTACTCCCC
GGCCCCCGCACATGGTAAATTAAAAC
>chr5A_556
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---------------------------------------------------------------------------GCTCC
GTCCCCATGGATCACAGCGGGCAACCAGAC-TGATGCCTTGATCGACCCACAAGCAAGCTCCAGTTTGTA---ATTTGTA
AAGATGAGCCAGTTTGGCCCTTGGAAACCGCAGTGGAGCCGAAGAAGAAAACACAAGA--CCCCTGATTTGCCGGCTACT
TGCGCGTACGGCTGCACCCACTACTGGCTAATCCCAATGCCA---ATGCCCCAAATTCTTGGCCGTGTTTCTAGCCAGCC
TCCACATGCCTATCTATCTATCAGTGACTGATTTGATTAGTGAAAGTAGCACCACGCTGCCGAA----CTGTCCCTTTGC
TGACCAGAGTAACTAGCTAGCCAGCGCGCTCCTTGGCACGATCTGCTCCCTATAAATTTGACCGCGCCGTGCAGATTTTG
ACGCAGCGGTCTCGGTTCGTCTACCTAGCTAGCTAGCTACTGTAA-TTGACAGTGG--TCATGGCGTTGCTCGTGGTGGT
TGGCGCCGCGGTTGTCGCAATGTGGCTACTGGCCGGTGAGGCGCGAGGCCAGGCGCAGCTCCAGGTAGGGTTCTACGCGC
ACTCGTGCCCCCAGGCGGAGGTGATCGTGAGGGACGAGGTCGGCAGGGCCGTCAGCGCCTACCCCGGCTTCGCCGCCGGC
CTCGTCCGCCTCCACTTCCACGACTGCTTCGTCAAGGTTTGCA---------CTTAGCTGTGTATCGACTAGCCAGTATG
AAATGCAGGTTGCA--ATGCAGGCGTGCGCTCCA------TTGAAAATGTCAGTGATGTACTGACGAGCTGTTGACTATG
GTTCGTGTCAGGGCTGCGACGCGTCAGTGCTGCTGGACTCGACGGCCAACAGCACGGCGGAGAAGGACGCCCCGCCCAAC
AAGAGCCTGAGGGGCTTCGAGGTCATCGACGCCGCCAAGAAGCGCCTCGAGGCCGCGTGCGCCGGGACCGTCTCATGCGC
CGACATACTCGCCTTCGCCGCACGAGACAGCGTCGTCCTGGTACGTACGGTGACAGGGCTCACATTGCTGCCAGC-----
---------CTTTTTTGAGCTCT-------------------TGCTCACACACCGTCAATGGCGACAATGGCAGGCCGGC
GGTAGCCCGTACGGCGTCCCGGCCGGGCGGAGGGACGGCAACGTGTCGGCGGCGTCCGACGCGCAGGCGAGCCTGCCCCC
ACCCACGGCGAACGTGGCCCATCTCACGGAAGCCTTCGGTAAGAATGGGCTCTCCCAGGAGGACATGGTCACGCTTTCAG
GTACCTAGCAGCCCACTCAAACACCCAC------------AGCCCAGCTCACATCGACAGCTTCGGGCGGCCAGTGACGT
TTTTTTTTTACTCTCTGCGTTTCTCATTTGTATGCGTTCAGGCGCGCACACGATCGGCGTGACGCACTGCAGCTCCTTCA
GCGCGCGGCTGCACGGGTACAACGCCACCACGGGCACGGGCCAGGACCCGGCCATGGACGCGGCCAAGGCGGCGGAGCTG
GCGCGGCAGTGCCCGCCGGGGAGCCCCAACGCAGTGCCCATGGACGCCGGCAGCCCCGACACGTTCGACACGGGCTACTT
CCGCGCCCTGCTGGCCAACCAGGGCGTCCTCGCCTCCGACCAGACGCTCACCTCCGACAACGCCACGGCCGCGCTCGTGG
CGCAGAACGCCGGCAACGTCTACCTGTTCGTGACCAGGTTCGGCGACGCCATGGTGAGGATGGGCGGCATCCGGGTGCTC
ACCGGCGGCGACGGCCAGATACGCACCAACTGCAGGGTCGTAAACTGATACACACTTGTTGCACC---------CTATCT
TATTCGCTTACACTTTACGTCACTCTGAATCCGTGGTATCTTCTTGGCCGGTTTTGCAAAATGCAATGGAGTTATATATG
CATCGACTGAATTTTGGACACGTACATTGCGTTGCGCGTGAGAGATGTGTGGTGTGGTGTGCGAGATCTCCCTTTCTCAC
CTGATAGGAAAGAGCTTCCAAAAA-------------------------------CTGGTTTAGTTATTCGGGTGATGCG
TGACGC----ATGGATCGGCCACACTGTAGACGTGCTTTTGTCATGTGTCGAGCAACCCTGGGTGCCTACCTAACA----
---------------AGAAAACAAGAAGAAACCTAACAAGAACCCGGGCAAAGATTCACCAGGTT----TAGTGTTTGCT
GAACCGGACAAGCAAGTTGGTAACAACAACAATACTCTAGTTTGAGTTTCTTTCTGGTGTCCAAAAAAAAA---------
---------------------------------------------------------------------------AGTTT
GAGTTTGTCCTCTTAATTATTAGAGC----TGGAAACGGCCACGATGGAAGAAAAGCAATCAATCAATCATCCTTTGTAA
CGGAGCCGGCAAAGTGGGGATGAGCACAAGACGGGGCTAAGAAAGAAGCTGCTGGATGGATGGAGCCAGTTCTCGC-TTT
TT-TTCAGGAAAGATTATCAACTATCCACTCATGAGGCTAGCA--------TTTCTTATTGCCAGGAGGAGACTCGTTGC
ATGTTGCAGTCGCCTCCTTGGTCCTCATTAAGCAAGTCCATGATGTCTTTTGTGTGAATTAAGTTCCATATCTTC-----
---------------------TTTCTTTATGGTGGCTGGTCAATAAACCATGATTCAGTGTTTGTCTA--AACAAAAATC
ATGATTCAGTGAATCCACTCACAGATGTAA-----AAAAAAAGCAGCAATTAGGCAGATCCAATTCAT------------
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--------------------------
>chr4B_556
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---------------------------------------------------------------------------GCTCC
GTCCCCATCGATCACAGCGGGCAACCAGAC-TGATGCCTTGACCGACCCACAAGCAAGCTCCAGTTTGTACTAATTCGTA
AAGATTAGCCAGTTTGGCCCTTGGAAACCGCAGTGGAGCGGAAGAAGAAAACACACGACGCCCCTGATTTGCCGGCTACT
TGCGCGTACGGCTGCACCCACTACAGGCTAATCCCAATGCCA----TGCCCCAAAATCTTGGCCGTGTTTCTAGCCAGCC
TCCACATGCC------------------------------------TAGCACTACACTGCCGAGCTGCCTGCCCCTTTGC
TGACCAGAGTAACTG--------GCACACTCCTTGGCACCATCTG-TCCCTATAAATTTCACCTCGCCGTGCAGATTTTG
ACGCAGCGGTCTCGGCTCTCCTACCTAGTAGCTACCCAATCGACATTTGACAGTGGTCTCATGGCGTTGGTCGTGGTGGT
TGGCGCCGCGGTTGTCGCAATGTGGCTACTGGCCGGTGAGGCGCGAGCGCAGGCGCAGCTCCAGGTAGGGTTCTACGCGC
ACTCGTGCCCCCAGGCGGAGGTCATCGTCAGGGACGAGGTCGGCCGGGCCGTCAGCGCCTACCCTGGCTTCGCCGCCGGC
CTCGTCCGCCTCCACTTCCACGACTGCTTCGTCAAGGTTTGCA---------CT-------------ACTAGCCAGTATG
AAATGCAGGTTGCGATATGCAGGCGTGCGCTCCAGCTCCATTGAAAATGACAGCGATGTATTGATGCGCGGTTGACTGTG
GTTCGTGTCAGGGCTGCGACGCGTCGGTGCTGCTGGACTCGACGGCCAACAGCACGGCGGAGAAGGACGCCTCGCCCAAC
AAGAGCCTCAGGGGGTTCGAGGTCATCGACGCCGCCAAGAAGCGCCTGGAGGCCGCTTGCGCCGGGACCGTCTCCTGCGC
CGACATACTCGCCTTCGCCGCCCGTGACAGCGTCGTCCTGGTACGTACGGCGACAAGGCTCATATTGCTAGGAGCCTATG
AGGACACTGCTTTGTTCAGCTCT-------------------TGCTTACACACCGTCAATGGC---------AGGCCGGC
GGTAGCCCGTACGGCGTCCCGGCCGGGCGGAGGGACGGCAACGTGTCGGCGGCGTCCGACGCGCAGGCGAGCTTGCCCCC
GCCCACGGCGAACGTGGCTCACCTCACTGAAGCCTTTGCAAAGAATGGGCTTTCCCAAGAGGACATGGTCACGCTTTCAG
GTACCTAGC---------------CCACCCAAACACCCACAGCCCAACTTACATCGACAGCTTCGGGCGGCCCGTGGCAT
TTTTTTTCC-CTCTCTGCATTTCTCATTTGAATACGTTCAGGCGCGCACACGGTCGGCGTGACGCACTGCAGCTCCTTCA
GCGCGCGGCTGCACGGGTACAACGCCACCACGGGCACGGGCCAGGACCCGGCAATGGACGCGGCCAAGGCGGCGGAGCTG
GCGCGGCAGTGCCCGCCGGGGAGCCCGAACGCGGTGCCCATGGACGCCGGCAGCCCCAACACGTTCGACACGGGCTACTT
CCGCGCCCTGCTGGCCAACCAGGGCGTCCTCGCCTCCGACCAGACGCTCACGTCCGACAACGCCACGGCCGCGCTCGTGG
CGCAGAACGCCGGCAACGTCTACCTGTTCGTGACCCGGTTCGGCGACGCCATGGTGAGGATGGGCGGCATCCGGGTGCTC
ACCGGCGGCGACGGCCAGATACGCACCAACTGCAGGGTCGTAAACTGACAAACACTTG----------------------
-------TTTCACTACACGTCACTCATAATCTGGAGTATCTTTTTGGCCGGCTTTGCAAA-TGCAGTGGAGTTATACATT
GATTGAGTTTC----GGACACGCACATTGCGTTGCGCGTGAGAGATGTGTGGTGTGCA-----AGATCTTCCTTTCTCTC
TTGATAGGAAAGAGCTTCCAAAAACTGTGCTGCGAGCTTTTGGCAAAGCGTATGCCTGCTTTAGTTATTCGGGTGATGGG
TGACGC----ATGGATCGGCCACGCTGTAGACGTGCTTTTGTCATGTGTCGAGCAACCCTGAGAGCCTACCTAAGAACAT
GTGCTTACCCTGATTAAAAAAGAAGAAGAGACCTAACAACCA----GGCAAAGATTCAGCAGGTTTAATTAGTGTTTACT
GAACCGGACAAGCAAGTTGGTAACAACAAT-----TCTAGTTTGAGCTTCCGTCCTTAATCAAAAAAGAAGAAGAAACCT
AACAACAGCCCTGAAAAAGATTCATCAGCTTCAGTGTTTGCTGAACCGGACAAGCAAGTTGGTAAGAACAATTCTAGTTC
GAGTTTTTCTCCTTGATTAAAGCTGCAAAATGGAAATGGCCACGATGAAAGAAAAGCAATCAATCAATCAAGCTTTGTAA
CGGAGCCGGCAAAGTAGGGATGAGCACAAGACAGGGCTAGGTAAGAAGCTGCTAGGTGGATGGAGCCAATTCTCGC-TTT
TTTTTCAGGAAAGATTATCAACTATCCACTCATGAGGCTAGCATTTCTTCGTTTCTTATTGCCAGGAGGAGACTCGTTGC
ATGTTGTAGTCGCCTCTTCAGTCCTCACTAAGCAAGTCCATGATGTC-------------------------TTC-----
---------------------TTTCTTTATGGTGGCTGGTCCATATATCATGATTCAGTG--------------------
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--------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
----S---------------S--------SS--------------S-----------S----------------------
--S---------------------------------------------------S-------------------------
-------------------------------------S----SSS-----------------------------------
------------------SS-S---------S------------------------------------------S-----
------------S-SS-----S--S----------S------S----------------------S--------------
------------------------------------SSSS------------------------------S---------
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---------------------------------------S-S-SSSSSSSSS----------------------------
--------------------------------------------S------S--------------------------SS
S-S----------------------S-----------------------------S------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------------------S---------
-----------S---S--SSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
-----------S--------------------------------------------------------S-----------
------------S--------------------------S----------------------------------------
-----------------------------------------------------------S----S--------------S
------S-------------------------------------------------------------------------
------------------------------------------------------------S-------------------
------------S-S-----------------------------------------S-----------------------
---------------------------------------------------------------------S----------
-S--------------------------------------------------------------S---------------
-----------------------------------------S-------SSS-SSSS-SSSSSS-SSSSSSSSS--S---
-S--------------------------------------------------S---------------------------
S---------------S---------------------------------------------------------------
----------------------------S----------------------SS----------------S----------
------SSSS---------S-------------------------------------------S------------S-S-
-S--------------------------------------------------------S---------------------
-----------S--------------S----S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-------------S--------------S--S--S--SS------------SS-
---------S------------------S-----------------------------------------------S---
------------S-------------------------------------------------------------------
---S----------------------------------------------------------------------SSSSSS
SSSSSSSSSSSSSSSSSSSSS------S-----------------------------------S--S-SS-----S----
---------------------S-S-SSS--SSSSS-----S-SS-S--S-------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_490
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----------------------------------------------------------------------CAGGGCCTAC
ATCGATCACC----------------------------------------------------------------------
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>reverse_1591
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----------------------------------------------------------------------TGAGCCTATG
TCGACACTGC----------------------------------------------------------------------
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>forward_511
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-----------CACCCCAGATGACCCTTGTC-------------------------------------------------
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>reverse_2589
--------------------------------------------------------------------------------
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----------------------------ACTGCGAGCTTTTGGCAAAG--------------------------------
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--------------------------
