>input_sequence_55466
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------------------------------------ATGGCGCCGCCGGGCTGCATCCAAGCCGCACCGCCGGAGCAGCC
GGCGCTCCAGGACGAGCTCCTCGAGGAAATCCTCCTCCGCCTGGCGGCGCCCGCCGACCTCGCCCGCGCCTCGACGGCCT
GCCCTACCCTGCGCCGCGTCATCACCGACCACTCCTTCCTCCGCCTCTTCCGCACTCTCCACCCGCCGCCTCTCCTGGGC
ATAATTTCCGCTAGCTTTCGCCCGGCCCAGCATCCCCATCCCTCCGCCGCCGCCGCCCGCGCCTTGGCCGCCGCGGAGGT
CGATTTCCGGTGCTCCTTCCTCCCCTCCGTCGAGCGT---TGGCGCCGCCGCGACTTCCGTGACGGACGCGCACTCTTCT
CCGGCGTCCCCGAGGGAAGCAGCTACGCTCCCGGCGATTACAAGCGCGGCGACTTCGCCAGGGAGTTCGCTGTCTGCGAC
CCCCTGTACCGGCGCTACATTCTGCTACCTGCCATTCCCGACGAACTAGCCATGCTGGTTCATCAACCGGACATCCTGAA
CTTCGAGCCCTTCCTTGCTCCTCCCGGTGATGATGAAGACGCCGCTTCATTCAGAGTGATGTGCCTGGCGCAGTGCACAA
CCAAGCTGGTCCTCTTCGGCTTCTCTTCGGGTGCCGGCGGATGGCGTGCTGTTACCTTTGACGGCTGGATCACTTTGATG
ACAAGTCCTGGCTACCAGCCTCCAGCCTCTCACTTGACATGGGCCTCAGGGCGCTACTATGCGCACAAATGCTTCTGTTG
GGCTGTTTATCCGTCCGACAGGTTGCTCATGCTTGACACGCGCACGATGGAGTTCTCTGCTGTCGACCTCCCATGTCAAC
ATGTCCCTGGCCAAATGATCCCAATAATGGCTTGTCAACGTGTCCCTGGCCAAATGATCCCAATAATGGCTTTTGTAGAG
GCAGGGGAAGGAAGGCTTGGGATGTTTACTCTCGTGAGTCGAATTGATAATGACAAGTATTACCTCCACTATACCAAGTT
GCAAAAAGATGGAGATGGTGCAAACAAGTGGCAATCGGTGGCGGTAATCTCCTTGCCCTTGCGTTATCGATATACAATCA
TGGGTGTAGCTGGGGGATACTTACTCCTGCAAGGGATTCCAGAAGACCTGCATTCGGCCCCTTTGCCGGAATGGCCAGAT
TTGGACTGTTTTTCACTGAATCTCCAGACATTGCAGCTTGAGTGGTTCTGTGCAAATAAGCACATGATTGTGAGTGCCCC
TCTATATGCCGGTTTACCACCATCCTTGACTCCACCAACTGTTTGA----------------------------------
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>chr6D_1_TraesCS6D01G347400
CTATTTTCACACTTTTTTTGACAAACTGAACACTTTAAAAATACATTAAATTTATTTAAGTCATGGAAAAATTAAATTAT
ATG-AAA------AAATACATGAACACC-TTTTTAAATTATATATAAATAAAATTATAAATTATGTGGACACTGTTTTAT
GTACGAGAACATTTTAGTATGTATACATGAACATTTTTTGGAACATTTGAAAAATTCTTCAAAGGCGTGAACACTTTTAG
AACTTACATGGACATTTTTTTCATTAGATTGAACACTTTATAAACCTATACGAAC---TTTTTTAAAGGTGTGAACAATT
TTAATGAATAAACAAACTAAAAATAGGTTCAATATGTTTCGTAATGAATGAACA--------------------------
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----------------TTTTTTATGTATGTGAAGATTTTTTTTTAAACACGCAAGTTTTACCCGAAAGAGTAGAGAAAAC
CAAATGTATTTTAAAAAAAATCCAGAAGAGAAAATAATATAA--TAATTGAATTGTTTACTTCACTC-TTTTTTAGTGAA
GAGCGTTGCTATTTTTTCTCTTTCTAAGGAATTGCATTGCTAGTTTTTTTAAAGGCAAAATTGCAAAACTTTATTCAACC
AGAAAATATGTTTACAGGAAG--AAGAATAGGATCATATGGCTGGCTAAACCT--------GGCCAAGCCCTTGAACTGG
AGCATGCTTTGCGAGGTT-----CTTATCTTATCTTTAAAATTGAAGTTTCGGAGCTCATGGACGAAGCTACAGGAATAA
AAAGACAGGGAATGTTCCTTGATTTCATGTATGGTGTTGCATCGTAGCTAGCTGCCGACCCCTTCTC-AATATCGTCGAT
CATCACCTCTTCTGCAGACT------------------------------------------------------------
-----AATGCAGCGTGTATCCGCTCTCTAGTGTTGTTGGTGGGCCTGGCAATGAAGAGCCCAAATCCAGTGAAGAGCTT-
---CCCCTCTCTGGCCCATTTGTCGGAGCGCTGAGATTTTTGGAAGGTCGAGAACCCTAAATCCCCAAATCCGCCTGCTG
CATTTCCACCGTT---------------CCACTCCAATGGCGCCGCCGGGCTGCATCCAAGCCGCACCGCCGGAGCAGCC
GGCGCTCCAGGACGAGCTCCTCGAGGAAATCCTCCTCCGCCTGGCGGCGCCCGCCGACCTCGCCCGCGCCTCGACGGCCT
GCCCTACCCTGCGCCGCGTCATCACCGACCACTCCTTCCTCCGCCTCTTCCGCACTCTCCACCCGCCGCCTCTCCTGGGC
ATAATTTCCGCTAGCTTTCGCCCGGCCCAGCATCCCCATCCCTCCGCCGCCGCCGCCCGCGCCTTGGCCGCCGCGGAGGT
CGATTTCCGGTGCTCCTTCCTCCCCTCCGTCGAGCGT---TGGCGCCGCCGCGACTTCCGTGACGGACGCGCACTCTTCT
CCGGCGTCCCCGAGGGAAGCAGCTACGCTCCCGGCGATTACAAGCGCGGCGACTTCGCCAGGGAGTTCGCTGTCTGCGAC
CCCCTGTACCGGCGCTACATTCTGCTACCTGCCATTCCCGACGAACTAGCCATGCTGGTTCATCAACCGGACATCCTGAA
CTTCGAGCCCTTCCTTGCTCCTCCCGGTGATGATGAAGACGCCGCTTCATTCAGAGTGATGTGCCTGGCGCAGTGCACAA
CCAAGCTGGTCCTCTTCGGCTTCTCTTCGGGTGCCGGCGGATGGCGTGCTGTTACCTTTGACGGCTGGATCACTTTGATG
ACAAGTCCTGGCTACCAGCCTCCAGCCTCTCACTTGACATGGGCCTCAGGGCGCTACTATGCGCACAAATGCTTCTGTTG
GGCTGTTTATCCGTCCGACAGGTTGCTCATGCTTGACACGCGCACGATGGAGTTCTCTGCTGTCGACCTCCCATGTCAAC
ATGTCCCTGGCCAAATGATCCCAATAATGGCTTGTCAACGTGTCCCTGGCCAAATGATCCCAATAATGGCTTTTGTAGAG
GCAGGGGAAGGAAGGCTTGGGATGTTTACTCTCGTGAGTCGAATTGATAATGACAAGTATTACCTCCACTATACCAAGTT
GCAAAAAGATGGAGATGGTGCAAACAAGTGGCAATCGGTGGCGGTAATCTCCTTGCCCTTGCGTTATCGATATACAATCA
TGGGTGTAGCTGGGGGATACTTACTCCTGCAAGGGATTCCAGAAGACCTGCATTCGGCCCCTTTGCCGGAATGGCCAGAT
TTGGACTGTTTTTCACTGAATCTCCAGACATTGCAGCTTGAGTGGTTCTGTGCAAATAAGCACATGATTGTGAGTGCCCC
TCTATATGCCGGTTTACCACCATCCTTGACTCCACCAACTGTTTGAAGTGGTAAG----CTTGTTGTTCCCACACTTTGC
TTGTATTTTGCAT--GCCGTATGGTAGG----ACATTGTGATATGATGCAAGTAT----TGGTTG-ATGGTAGTAT-CCC
TGTCATTTTACTTATTTGAGCTAATGGTCATCAGTGCGGATGTAGCCAAGTTATGTTCTGTCCATTATAAACCTCGTAG-
-----GGCTTGTTGGTGTTTAGTT--TCTT---CTAGTGGTCATTTTATCTGTACAATTAGATAGCCGTGAAACTCACGA
AAGCAAGAGCCATTTGTTTCTCATATGTGAACATGCGTGCATTCCATCATTCTTAGGGGGCAAAGTCACCAAG-------
--TTATG---------GCAGGAGAAATAATTATAATCTTTGCTGCAAA-TCGATCACAGGGCTATGTTTAAATATACTTG
TTTGCTTTTGTTGCACAGGG------------------------------------------------------------
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-------------------------CATTTGCAGTTAGATTTCCTGATCATATGAGTGCTGCTGCATGTCTTACAATTAG
GGACAAAAATTACTTATTTCCATCATTATATTCATAGTGATCTCATC----------TTACAAATGACAGCTGACATATC
ATGATTGACCCCTCTTTCAACGTCGCGAATGCCCTAGCCCAACCCACCTCTAGCGTTGACTTAAACATGGGCAATTGAGG
CATGCACTACAGCAGAAACACCATCAAGTCTAAGGGAAAGCATCAATATTAGTGTAAACTCCCATGTTATGCCTGAAAAG
ATGATGCAAAGTGCCAGTTTTGTTAAAAGGTGCTGCTTGCTGCCGCTAATGACATTTTGTGTGGTGTCTTATGCTTGCTG
CCAGTTTATGTAATGTTGGGCTCATATATTTGCCAATTAGTGTAATGTAATGTTGACTAA--------------------
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------------------------------------------------------GGATACCTTGTACTAATGATTGTAAT
GTAGATGCAAACGATAATATAAGATTTGAGTATATTTAAGGATGTCATCATAGAATTAGGTTGACTAAGAACTAAACATC
TTTTTTCCATGATTACCTGATTTATGAGACT-GAGAAAAAGACACCGCTTACGTAAATTGGT
>chr6A_27
TGAACAC---------------------------TTAAAAATACATTAAAATTTTTTAAGTCATGGAAAATTTAAATTAT
AC-AAGA------AAATACATGAACTCCGTTTT--AACTATATATAATTATAACTCTAAATTATGTGGACACTTTTTTAT
GTATGAGAACATTTTAGTATGTATACATGAACACTGTTTGGGACACGTGAAAAATTCTTCAAAGGCATGAACACTTTTAA
AACTTACATGGACATTTTTT-CATTAGATTGAACAATTCATAAACCTATATGAACAATTTTATAAAATGTGTGAATACTT
TTAATGAATACACAAACTCAAAATAGGTTCAATATTTTTCGTAATGAATGAATTTTTTTATTACATGAACAATTTTTTCA
AAATAACTAAATATTTCTAATAGCATTAAAACTAAACGATTTTTTTAAGTATGGGAACAAATTTGGGAAACACGTGAGTA
ATTTGTATAAATTATGTGATCGTTTTTGAAAAATGTGTTAACACTTTTTGTAGTACATGAATATTTTCAAATACACTAAA
TCATTTCTTAATACATGATAAAACATTTTTTTCATTACACGGTTTACATTTCATACATGATGAATATTTTTGAAGTACAG
TATTAATACTTTCTTTAATGCACGATACCCATTTTCTGAAATACACGTTGAACACATGTTAATACGCAATGAGTTTTTTG
GTAATACAAGTTGAACATTTCTAATGCATGATGAGCATTTTTTTAATATGCATACACAAACATATATCAAAATACACATT
TTGTATATGCGAACATTTTTTTATGTAAGTGAAGATTTTTTTTAAA-CACGCAAGTTTTACCCGAAAGAGTAGAGAAAAC
CAAATGTATTTT-TAAAAAATCCAGAAGAGAAAATAAAATATAACAATTGAATGGTTTACTTCTCTC-TGTTTTAGTGAA
GTGCGTTGCTATTTTTTTTCTTTTTAAGGAAGTGCATTGCTAGTTTTTTTAAAGGCAAACTTGCAAAACTTTATTCAGCC
AGAAAATATGTTTACAGGAAG--AAGAATAGGATCATATGGCTGGCTAAACCT--------GGCCAAGCCCTAGAACTAG
AGCATGTTTTGCGAGGTT-----CTTAGCTT-----TAAAATTGAAGTTTCGAAGCTCATGGATGAAGCTACAGGAAAAA
AAAGACGGGGAATGTTCCTTGATTTCATGGATGGTGTTGCATCGTAGCA-------------------------------
--------CTTCTGCAGACT------------------------------------------------------------
-----AATGCAA---------------------TGTTGGTGGGCCTGGCAATGAAGAGCCCAAATCCAGTGAAGAGCTT-
CCCTCCCCCTCTGGCCCATTTGTCGGAGCGCTGAGATTTTCGGAAGGTCGAGAACCCTAAATCCCCAAATCCCCTTGTTG
CATTTCAACCATGCCACCG--------------CCAATGGCGCCGCCGGGCGACATCCAAGCCGCACCGTCGGAGCAGCC
GGCGCTCCAGGACGAGCTCCTCGAGGAGATCCTCCTTCGCCTGACGGCGGCCGCTGACCTCGCCCGCGCCTCGACGGTGT
GCCCCACCCCGCGCCGCGTCATCACCGACCACTCCTTCCTCCGCCGCTTACGCACCCTCCACCCGCCGCCTCTCCTCGAC
ATAATTTCCGC---------------------------------------------------------------------
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>chr6B_27
--------------------------TGGACACTTAAAAAATACATTAAAATTATTTAAGTCATGGGAAAGTTAAATTAT
ATGAAAA------AAATACATGAACACC-TTTT--AATTATATATAATTATAACTATAAATTATGCGGACACTTTTTTAT
GTATGAGAACATTTTAGTATGTATACATGAACATTGTTTGGAACATGTGAAAAATTCTTCAAAGGCGTGAACACTTTTAA
AACTTACATGGACATTTTTT-CATTAGATTGAACACTTCATAAACCTATATGAAAATGTTTATAAAAGGTGTGAATAATT
TTAATGAATACACAAACTCAAAATAGGTTCAATATTTTTCGTAATGAATGAATTTTTTTATTGCGTGAACAACTTTTTCA
AAATAAATAAATATTTCTAATAGCATTAAAACTAAATGATTTTTTAAAATACGGAACAAAGATT-GGAAAGACGTGGGTA
TTTTGTATAAATTATGTGACCGTTTTTGAAAAATGTGTTAACACTTTTCGTAGTACATGGATATTTTCAAATACACGGAA
TCATTTCTTAATACATGATAGACATTTTTTTTCATTACATGGTTTACAATTCATACGTGATTAATATTTTTGAAGTATAG
TATTAATACTTTCTTTAATGCACGATAACCATTTTCTGAAATACACGTTGAACACATTTTAATACGCAATGAAATTTTTG
GTAATACAAGATGAACATTTTTAATGCATGATGAGCAATTTTTTAATATGCATACACAAATATATATCAAAATACACATT
TG------------ATTTTTTTATTTAAGTGAAGATTTTTTTAAACA--TGCAAGTTTTATCCGAAAGAGTAGAGAAAAC
CAAATGTATTTT-TAAAAAATCTAGAAGAGAAAATAAAATAAAATAATTGAATTGATTACTTCGCTC-TTTTCTAGTGAA
GTGCGTTGCTATTTTTCTTCTTTTTAAGGAAGTGCATTGCTAGTTTTTTAAAAGGCAAACTTGCAAAACTTTATTCTGCC
AGAAAATATGTTTACAGGAAG--AAGAATATGATCATATGGCTGGCTAAACCT--------GGCCAAGCCCTTGAACTAG
AGCATGCTTTGCGAGGTTCTTATCTTAGCTT-----TAAAATAGAAGTTTCAGAGCTCATGGACGAAGCTACAGGAATAA
AAAGACAGGGGATGTTCCTTGATTTCATGTATGGTGTTGCATCGTAGCTAGCTTCCAACCCCTTCCC-AATATCGTCGAT
CATCACCTCTTCTGCAGACTTTTTTTAGACATTCTTCTGCAGACTTTGTTTTTTGTGAGACCA------CATTCTTCTGC
AGACTAATGCAATGTGTATCCGCTCTCTAGTGATGTTGGTGGGCCTGGCCATGAAGAGCCCAAATCCAGTGAAGAGTTCC
CCCCCCCCCTCTGGCCCATTTGTCTGTGCCCTGAGATTTTTGGAAGGTCGAGAACCCTAAATCCCCAAATCCGCTTTAGC
TTGTTGCAT---T---------------CCAGCTGAATGGCGCCGTCGGCCTGCATCCAAGCCGCTGCTCGA-AGCAGCC
GGCGCTCCAGGACGAGCTCCTCAAGGAAATCCTCCTCCGGCTAACCGCGGCCGCCGACCTCGCCCGCGCCTCGGCGGCCT
GCCCCACCCTGCGCCGCGTCATCACCGACCACTCCTACCTTCGCCTCTTCCGCACCCTCCACCTGCCGCCTCTCCTCAGC
ATAATTTTCGCTACCTTCCGCCCGACCCAACACCCCCAT-CCTCCACCGCGGCCGCCCGCGCCTTCGCCGCTGCGGAGGT
CGATTTCTGGTGCTCCTTCCTCCCCTCTGTCGAGCAT---TGGCGCCACCGCGACTTCCGTGACGGTCGCACCCTCTTCT
CTGGTGTCCCCGAGGGAAGCAGCTATGCTCCCGGCGATTACAAGCGCGGCGACTTCGCCAGGGAGTTCGCTGTCTGCAAC
CCCTTGTACCGGCGCTACATTATGCTCCCTGCCATTCCAAACGAACTAGCCGTGCTAGTTCATCAACCGGACATCAGGAA
CTTCGAGCCCTTCCTTGCTCCTCCTGGCGACGATGAAGACACCACTTCATTCAGAGTGGTGTGCCTAGCGTAGTGCACAA
CGAAGCTGGTCCTCTTCGTCTTCTCTTCCGGTGCCGGCGGATGGCGTGCTATTACCTTTGACGCCTGAATGACTTTGATA
ACAAGTCCTGGCAACCAGCCTCCAGCCTCTTACTTGACATGGGCCTCAGGGCGCTACTACGTGCACAAATGCTTCTGTTG
GGCTATTTATCCGTCCAACAGGTTGCTCATGCTTGACAGGCGCACCATGGAGTTCTCTCATGTCGACCTCCCATGTCAAC
GTGTACCTAGCCAA---------------------------------------ATGATCCCAATAATGGCTTTTGTAGAG
GCAGGGGAAGGAATGCTTGGGATGTTTGCTCTCGTGAGTTGAATTGATAATGACAGGTATTACCTCCACTATACCAAGTT
GCAAAAACATGGAGATGGGGCAAACAAGTGGCAATCGGTGGCGGTAATCTCCTTACCTTTGGGTTATCGATATACGACCA
TGGGTGTAGCTGGGGGATACTTACTCCTGCAAGGGATTCCAGAAGACCTACATTCAGCCCCTTTGCCTGAAAGGCCAGAT
TTGGACTGTTTTTCACTGAATCTCCAGACATTGCAGCTTGAGTGGTTCTGTGAAAATAAGTACATGATTGTGAGTGCCCC
TCTATATGCCGGCTTCCCACCATCCTTGACTCCACCAACTGTTTGAAGTGGTAAG----C---TTGTTCCCAGACTTTGC
ATTTATTTTGCAT--GCCATATGGCAGG----ACATTGTGATATGATGCAAGTAC----TGGTTG-ATGGTAGTAT-CCC
TGTCATTTTACTTACTTAAGCAAATGGTCATCAGTGCGGATGTAGACAAGTTATGTTCTGTCCATTA-------------
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>chr6B_27
--------------------------TGAACACTTAAAAAATACATGAAATTTATTTAAGTCATGAACAATTTCAAATTA
TATGGAACAAATTAAATACGTGAACACCTTTTT--AATTATGTATAAATATAATTATGAAGTATGTAGACACTTTTCTAT
TTACAAGAACATTTTAGTATGTATACATGAACACTGTTTTGGAACA----------------------------------
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-------------------------------------------------------TTTTAATACACGATGGACACGTT--
-------------------------TTAATACACAATGAGTTTTTTGGAATACACAATGTTA------------------
-----------------------------------TGTAGACACTTTTCTATTTACAAGAACATTTTAGT----------
------------------------------------------------ATGTATACATGAACACTGTTTTGGAACAT---
-------------TTTAATACACGA-----------------------TGGACACGTTTTAATACACAATGAATTTTTTG
GGAATACAC-----------------------------------------------------------------------
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----------GATGTTCCTTGATTTCATGTATGA--TTGCTTCGTAGCTAGCTGCCGATCACTTCCCAAATATCGTCCAT
CATCACCTCTTCTGCAGACT------------------------------------------------------------
-----AATGCAACTTGTATCCGCTCATTGGTGGTGTTAATGGGCCTGGACCGGTACACGTTTGGTTAGGACTCACTACAA
GCGG-----TCTGGCCCATTTGTCGGAGCGCTGAGATTTGC--AAGGTACAGAAACCTAAATCCCCAAATCCGCTTCAGC
CTGTTGCAT---TTCCAGTCCCCAGCCCCCACCCCGATGGCGCCGCCGGGCGACGTCGAAGCCACGCCGCCGGAGCAGCC
GGCGCTCCAGGACGAGCTCCTCGAGGAAATCCTCCTCCGGCTAACCGAGGCCGCCGACCTCGCCCGCGCCTCGACGGCCT
GCCCCACCCTGCGCCGCGTCATCACCGACCACTCCTTCCTCCGCCGCTTCCGCACCCTCCACCCGCCGCCTCTCCTCGGC
ATAATTTCCGCCACCTTCCGCCCGGCCCAGCATCCCCATCCCTCCGCTGCCGCCGCCCGCGCCTTCGCCGCCGCGGAGGT
CGATTTCTGGTGCTCCTTCCTCCCCTCCGTCGAGCAGCGATGGCGCCACCGCGACTTCCGTGACGGTCGCGCCCTCTTCT
CTGGCATCCCTGAGGGGAGAAGCTACGCTCCCGGCGATTACGATCCCCGCGACTTCGTCGGGGAGTTCGTTGTCTGCGAT
CCCCTGTACCGGCGCTACCGTCTGCTACCTCCCATTTCCGACGAACTAGCGGTGCTAGTTCATCAGCCCGATATCGTCAA
CTTCGAGCCCTTCCTTGCTCCTCCTGGCGATGTTGAAGACCCTACTTCATTCAGAGTAATGTGCCTGGCGCAGTGCACAA
CCAAGCTGGTCCTCTTCGTCTTCTCTTCGGGTGCCGGCGAATGGCATGCTGTTACATTTGACGGCTGGATCGCTTTGGTG
ACAAGTCCTGGCAACCAGGTTCCAGACGCTCACTTGACATGGGCCTCAGAGCGCTACTATGTGCACAAATGCTTCTGTTG
GGCTGTTTCTCCGTCCAACAAGTTGCTCATGCTTGACACGCGCACGATGGAGTTCTCTGCTGTCGACCTCCCACGTCAAC
ATGTCCCTGGCCAG---------------------------------------ATGATCCCAATGATGGCTTTTGTAGAG
GCAGGGGAAGGAAGGCTTGGGATGTTTACTCTCATGAATCGAATTGATAATGATAGGTATTTCCTTCGCTATACCAAGTT
GCAAAAAGATGGAGATGGTGCAAACAAATGGCATCCGGTGGCGATAATCTCCTTGCCCTTGGGTTACCGATATACGATCA
TGGATGTAGCTAGGGGATACTTACTCCTGCAAGGGATTCCAGAAAACCTGCATTCGGCCCCTTTGCCGGAAAGACCAGAT
TTGGACTGTTTTTCACTGAATCTCCAGACATTGCAGCTTGAGTGGTTCTGTGCAAATAAGTACATGATTGGGGGTGCCCC
TCTGTATGCTGGTTTCCCACCATCCTTGACGCCACCAACTGTTTGAAGTGGTTAGTAAGC---TTGTTCCCAGTCTTTGC
TTGTATTTTGCATATGCCATATGGTAGGACATACATTGTGATATGATCATATGATGCAGTGTTTG-ATGGTAGCATCCCT
TGTCATGCTACTTATTTTAGCAAATGGTCATCAATGCGGATGCAGCCAAGTTATGTTCTGCCCATTATAATCCTTGTAG-
-----CGCCTGTTGGTGTTTAGGTTATCTT---CTGATGGTCATATTATCTGTACAATTAGATAAATGTAAATCTCATGA
AAGCAAGAGCCATTTGTTTTTCATGTGTGAACATGCGTGCATTCCATCATTTTGAGTTGGGAAAGTCACCAAGTTATGGG
CCTTATG---------GCAGGAGAAATAATTATTATCTTTGCAGCAAAATTGATCATAGGGCTATGTTTAAAAATATGTG
TGAGCTTTTGTCGCACGAGGCATTTGTAGTTAGATAAAAAAAATGAGACCAACCTGGACTAGCCCTCGGTGGCATTATTT
TATATAGAAGAAACAACCTAAGCACCTGGGGTTGAGCCAAGACTTGAACCCTGGCAGGCTAGCTGCACACTCGCAGCCGT
AGCCAACGGAGCGACACCCCGTTCTCATTTGTAGTTAGATTTCCTGATCATATGAGTGCTGCGGCATGTTGTACAGTTAG
GGACAAAAATTACTCATTTCCATCTGTATATTCATAGTAATCTCATCCTCTGTTCTGTTACAAATGGCAACTGA-ATATC
GTGATTGACCCCTCTTTCAGCGTCGCAAATGCCGTAGCCCAATCCACCTCTAGCATTGACCTAAACATGAGCAATTGAGT
CATCCACTATAGCA------------------------------------------------------------------
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>chr6D_383
TTTTC---------------------------------------------------------------------------
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------------------------------------TTTTCTTAACA--TGCAAGTTTTGCCCAAAAGAGTAGAGAAACC
CGAAGATGTTTT-TAAAATATCTGGAAGAGAAAAGAAAATATAATAATTGAGCCGTTTGCTTTGCTCTTTTTTTAGTGAA
GTGCGTTGCTAGTTTT----TTTTTAAGGCAGTGTGTTGCTAGTTTTTGTTAAGGCATACTCGGAATGCTTTATTCAACC
AGAAAATAATGTTTAC----AACTAGAATTGGATCGTATAGCTGGCTAAATCAGACATGGCGGCAAAGCCCTAGAACTAG
GGCATGCTTTGCAAGGTTGTG-----AGCTT-----CAAAATTAGAGTTTAGAAGCTCATGGATGAAGCTACAGGAATAA
AAAGACAGGGAATGTTCCTTGATTTCATGTATGA--TTGCATCATAGCTAGCTGCCGACCCCTTTTC-AATATCGTCGAT
CATTTT--------------------------------------TTTTATTTTTTTGAGAAACATCGATCATTACCTTGC
GGACTAATAC------------------AGTGATGTTGCTGGGCCTGGCCCGGTACCCACGTCCGGCACTACGAGCTTT-
---TCCCTCTCTGGCCCATTTGTCGGAGCTCTGAAAAAAAAAATGCATCGAGAACCCTAAATCC--------GCTTGCGG
CATTTCCACCC-T---------------CCACCCCAATGGCGCCGCCGGGCGACATGGAAGCCACGCCGTCGGAGCAGCC
GGAGCTCCAGGACGAGCTCCTCGAGGAAATCCTCCTCCGGCTAACCACGGCGGCCGACCTCGCCCGCGCCTCGACGGCCT
GTCCTACCCTGCGTCGCGTCATCACCGACCACTCCTTCCTCCGCCGCTTCCGCACCCTCCACCCGCCGCCTCTCCTCGGC
ATAATTTCCGTCACCTTCCGCCCGGCCCAGCACCCCCATCCCTCCGCCGCCGCCGCCCGCGCCTTCGCCGCCGCGGAGGT
CGATTTCTGGTGCTCCTTCCTCCCCTCCGTCGACCGT---TGGCGCCACCGCCACTTCCGTGACGGCCGCGCCCTCTTCT
CCGGCGTCCCCGAGGGAAGCAGCTACGCTCCCGACGATTACGATCCCCGCGACTTCGCCGGGGAGTTCGCTGTCTGCGAC
CCCCTGTACCGGCGGTACCGTCTGCTACCTCCCATTTCCGACGAACTAGCGGTGCTAGTTCATCAGCCGGATATCGTCAA
CTTCGAGCCCTTCCTTGCTCCTCCTGGCGATGATGAAGACCCTACTTCATTCAGAGTAATGTGCCTGGCGCAGTGCACAA
CCAAGCTGGTCCTCTTCGTCTTCTCGTCGGGTGCCGGCGAATGGCATGCTGTTACCTTTGACGGCTGGATCGCTTTGGTG
ACAAGTCCTGGCAACCAGGTTCCAGACGCTCACTTGACATGGGCCTCAGAGCGCTACTATGTGCACAAATGCTTCTGTTG
GGCTGTTTCTCCGTCGAACAAGTTGCTCATGCTTGACACGCGCACGATGGAGTTCTCTGCTGTCGACCTCCCACGTCAAC
ATGTCCCCGGCCAA---------------------------------------ATGATCCCAATGATGGCTTTTGTAGAG
GCAGGGGAAGGAAGGCTTGGGATGTTTACTCTCATGAATCGAATTGATAATGACAGGTATTTCCTTCGCTATACCAAGTT
GCAAAAAGATGGAGATGGTGCAAACAAGTGGCAATCAGTGGTGATAATCTCCTTGCCTTTGGGTTACCGATATACGATCA
TGGATGTAGCTGGGGGATACTTACTCCTGCAAGGGATTCCAGAAAACCTGCATTCGGCCCCCTTGCCGGAAAGGCCAGAT
TTCGACTGTTTTTCACTGAATCTCCAGACATTGCAGCTTGAGTGGTTCTGTGCAAATAAGTACATGATTGGGGGTGCCCC
TCTGTATGCTGGTTTCCCACCATCCTTGACGCCACCAACTGTTTGAAGTGGTGAGTAAGC---TTGTTCCCGGTCTTTGC
TTGTATTTTGCATATGCCATATGGTAGGA---------------------------------------------------
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>chr6A_392
A-------------------------------------------------------------------------------
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------------------------------------------AAGCA--CGCAAGTTTTACCCGAAAGAGTAGAGAAAAC
CGGAGATA-TTT-AAAAAAATCTGGGAGAGAAAAGAAAATATAATAATTGAGCCGTTTGCTTTGCTC-ATTTTTAGGGAA
GTGCATTGCCAAAAAAATTCCTTTTAAGGAAGTGCATTGGTAGCTTTTTAA-AGGCAAACTTGGAAAACA-TATTCAATC
AAAAATAATGTTTATAGATAAAAAAGAATAGGACCATTTGGTTGGCTAAAACC--------GGACATGCCGACCAATCCC
TAGAAT---------GTTGTG-----AGCTT-----CAAAATTAAAGTTTCAAAGCTCATGGATGAAGCTACAGGAATAA
AAATACAGGGAATGTACCTTGATTTCAT---------TGCATCGTAGCTAGCTGCCGATCCCTTCTC-AATATCGTCGAT
CATCACCT------------------------------------------------------------------TTTTGC
AGACTAATGCAACGTGTATCCGCTTGCTGCATTTCC--------------------------------------------
-----------------------------------------------------ACCCTAAATCC--------GCTTGCTG
CATTTCCACCC-T---------------CCACCCCAATGGCACCGTCGGGCGACATCCAAGCCACGCCGTCGGAGCAGCC
GGCGCTCCAGGACGAGCTCCTCGAGGAAATCCTCCTCCGCCTAACCGCGGCCGTCGACCTCGCCCGCGCCTCGACGGCCT
GCCCTACCCTGCGCCGCGTCATCACCGACCACTCCTTCCTCCATCGCTTCCGCACCCTCC--------------------
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>chr6A_1219
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--------------CTTCCGTCCGGCCCAGCACCCCCATCCCTTCGCCGCCGCCGCCCGCGCCTTGGACGCCGTGGAGGT
CGATTTATGGTGCTCCTTCCTCCCCTCTACCA---AGCGATGACACCACCTCGACTTCCGTGATGGACGCGCCCTCTTCT
CTGGCATTCCTGAGGGAAGCAGCTACGGTCCCGACGATTACAAGCGCAGCAAATTCGCCAGGGAGTTCGCTGTCTGTGAC
CCCCTGTACCGGTGCTACCGTATGCTGCCTACCATTCTCGACGAACTAGCCGTGCTAGTTCATCAACCGGACATCCTGAA
CTTTGAGTCCTTCCTTGCTCCTCCTGGCGATGATGAAGACACCTCTTCATTCAGAGTAATGTGCCTAGCGCAGTGCACAA
CCAAGCTGGTCCTCTTCGTCTTCTCTTCCGGTGCCGGCGAATGGGGTGCTGTTACCTTTGACGGCTGGATCGCTTTGGTG
ACAAGTCCTGACAACCAGCCTCGAGCCTCTCACTTGACATGGGCCTCAGGGCGCTACTACGTGCACAAATGCTTCTGTTG
GGCTGTTTATCCATCCAACAGGTTGCTCATGCTTGACACGCGCACCATGGAGTTCTTTGCTGTCGACCTCCCACGTCAAC
GTGTCCCTGGCCAAATGATCCCAATAATGGCTTGTCAACGTGTCCCTGGCTAAATGATCCCAATAATGGCTTTTGTAGAG
GCAGGGGAAGGAATGCTTGGGATGTTTACTCTTGTGAGTCGAATTGATAATGACAGGCATTACCTCCACTATACCAAGTT
GCAGAAAGATGGAGATGGTGCAAACAAGTGGCAATCTGTGGCGGTAATCTCCTTGCCCTTGCATTATCGATATACAATCA
TGGGTGTAGCTGGGGGATACTTACTCCTGCAAGGGATTCCAGAAGACATGCTTTCGACCCCTTTGCCG------------
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>chr6A_1882
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----------------------------------------TGTCCCTGGCCAAATGAACCCAATGATGGCCTTTGTGGAG
GCAGAGGGAGGAAGGCTTGGGATGTTTGCTCTCGTGAGTCGAATTCATAATCACAAGTATTTCCTCCGCTATTCCAAGTT
GCAAAAAGATGGAGATGGTGCAAACAAATGGCATCCGGTGGCGATAATCAACTTGCTCTTGGGTTACCGATATACGATCA
TGGATGTAGCTAGGGGATACTTACTCCTGCAAGGGATTCCAGAAAACCTGCATTCGGCCCCTTTGCCGAAAAGGCCAAAT
TTCGACTGTTTTTCACTGAATCTCCAGACATTCCAGCTTGAGTGGTACTATGCAAATAAGTACATGATTGGGCGTGCCCC
TGTGTATGCTGGTTTCCCGCCATCCTTGACGCCACCAACTGTTTGAAGTGGTGAGTAAGC---TTGTTCCCAGTCTTTGC
TTGTATTTTGCATATGCCATATGGTAGG----CCTTTGTGATATGATGAAGGTAT----TGGTTTCATGGTAGCATCCCT
TGTCATGCTACTTATTTTAGCAAAGGGTCATCAGTGCGGATGTAGCCAAGTTATGTTCTGTCCATTATAATCCTCGTAG-
-----CACCTGTTGGTGTTTAGGTTATCTT---CTGATGGTCATATTATCTGTACAATTAGATAGCTGTAAAACTCATGA
AAGCAAGAGCCATTTGTTTCTCATGTGTGAACATGCGTGCATTCCATCATTTTGAGTGGGGAAAGCCACCAAG-------
--TTATGGGCCTTATGGTAGGAGAAATGATTATTATCTTTGCAGCAAA-TTGATCATAGGGCTATGTTTAAATATATGTG
TGAGCTTTTGTCGCATGAGGCATTTGTAGATA------------------------------------------------
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>chr6A_2146
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----------------------------------------------------------------GCCGCAAAGGCCAGAT
TTGGACTGTTTT-CACTGAATCTCCAGGCGTTGTAGCTTGAGTGGTTCTGTGCAAACAAGTACATGATTATGAGTGCCCC
TCTATATGTTGGTTTCCCACCATCCTTGACTCCACCAACTGTTTGAAGTG----GTAAGC---TTGTTCCCAGACTTTGC
TTGTATTTTGCAT--GCCATATGGTAGG----ACACTGTGATATGATGCAAGTAT----TGGTTG-ATGGTAGTAT-CCC
TATCATTTTACTTATTTGAGCTAATGGTCATCAGTGCGGATGTAGCCAAGTTATGTTCTGTCCATTATAAACCTCGTAGT
CATAGGGCTTGTTGGTGTTTAGGT--TCTT---CTAGTGGTCATTTTATCTGTACAATTAGATAGCCATGAAACTCAGGA
AAGCAAGAGCCATTTGTTTCTCATATGTGAACATGCATGCATTCCATCATTCTGAGGGGGCAAAGTCACCAAG-------
--TTATG---------GCAGGAGAAATAATTATTATCTTTGCTGCAAA-TCGATCACAGGGCTATGTTTGAATATACTTG
TTTGCTTTTGTTGCACAGGG------------------------------------------------------------
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-------------------------CATTTGCAGTTAGATTTCCTGATCATATGAGTACTGCTGCATGTCTTACAATTAG
GGACAAAAATTACTTATTTCCGTCATTATATTCATAGTGATCTCATC----------TTACAAATGACAGCTGACATATC
ATGATTGACCCCTCTTTCAACGTAGCGAATGCCCTAGCCCAACCCGCCTCTAGCGTTGACTTAAACATGGGCAATTGAGA
CATGCACTACAGCAGAAACACCATCAAGTCTAAGGGAAAGCACCAATATTAGTGTAAACTCCCATGTTATGCCTGAAAAG
ATGATGCAAAGTGCCAGTTTTGTTACAAGGTGCTGCTTGCTGCCGCTAATGACATTTTGCGTGGTGTCTTATGCTTGCTG
CCAGTTTATGTAATGTTGGGCTCATATATTTGCCAATTAGTGTAATGTAATGTTGACTAA--------------------
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------------------------------------------------------GGATACCTTTTACTAATGATTGTAAT
GGATGC---AAAGATAATATAAGATTCGAGTTTATTTAAGGATATCATCCTAGAATTAGGTTGACTAAGAACTAAACATC
TTTTTTCCATGATTACCTGATTTATGAGACT-GAGAAAAAGACACCGCTTAAGTAAATT---
>chr6A_2459
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-------------------------------------------------------------------------TCGTAG-
-----GGCTTGTTTGTGTTTAGGT--ACTTCTACTAGTGGTCATTTTATCTGTACAATTAGATAGCCGTGAATCTCAGGA
AAGCAAGAGCCATTTATTTCTCATGTGTGAACATGTGTGCATTCCATCATTTTGAGGGGGGAAAGTCACCAAG-------
--TTATG---------GTAGGAGAAATAATTATAATCTTG--------------CATAGGGCATTGCTTAAATACACGTG
TGAGCTTTTGTTGCACAGGG------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAATTGCAGTTAGATTTCCTGATCATATCAGTGCTGCCGCATGTCTTACAATTAG
GGACAAAAATTACTTGTTTCCATCATTATATTCATAGTGATCTCATA----------TTAGA------------------
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-----------------------------------------------------GTAAACTCCCATGTTATGCCTAAAAAG
ATGATGCAAAGTG-CAGTTTAGTTAAAATGTGCAGCTTGCTGCCACTAATGACATTTTGCATGGTGTCTTCTGCTTGCTG
CTAGTTTATGTAATGTCGGGCTCATATATTTGCCAATTAATGTAATATTGGGCTCATATATTTCCTTTTAGGCATCTACA
AGTCTTTTATTGGGCTTAAGTAATGGTAGGCTTATATCTAGTAGAAGTTAATATTTTCATGTGGTTCCCATCTACTACAG
ATTGCTTCATATACAAGTACAAAGAATATGTAGCTCACTAGCTCCATATATATATATATCCTATGTAGCTTCTCCTTCAA
CCATTGCAGTGCTTCAAGCTGATTGCTTAGCATGGCATGATATACAACCCTATCGGGTACTTTTTACTAATGAACGTAAT
GTAGATGCAAACGGTAATATAAGATTCAAGTTTATTTAAGGATATCATCATAGAATTAGGTTGACTAAGAACTAAACATC
TTTTTTC-ATGATTACCTGATTTATGAGACTTGAGAAAAAGACGCCGCTTAAGTAAATTGGT
>chr3A_2459
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-------------------------------------------------------------------------TCGTAG-
-----GGCTTGTTTGTGTTTAGGT--TCTTCTACTAGTGGCCATTTTATCTGTACAATTAGATAGGCGTGAATCTCGGGA
AAGCAAGAGCCATTTGTTTCTCATGTGTGAACATGCGTGCATTCCATCATTTTGAGGGGGGAAAGTCACCAAG-------
--TTATG---------GTAGGAGAAATAATTATAATCTTG--------------CACAGGGCATTGCTTAAATACACGTG
TGAGCTTTTGTTGCACAGGG------------------------------------------------------------
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-------------------------AATTTGCAGTTAGATTTCCTTATCATATAAGTGCTACCGCATGTCTTACAATTAG
GGACAAAAATTACTTGTTTCCATCATTATATTCATAGTGATCTCATA----------TTAGA------------------
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-----------------------------------------------------GTAAACTCCCATGTTATGCCTGAAAAG
ATGATGCAAAGTG-CAGTTTAGTTAAAATGTGCAGCTTGCTGCCGCTAATGACATTTTGCATGGTGTCTTCTGCTTGCTG
CCAGTTTATGTAATGTCGGGCTCATATATTTGCCAATTAATGTAATGTTGGGCTCATATATTTCCTTTTAGGCATCTACA
AGTCTTTTATTGGGCTTAAGTAATGGTAGGCTTATATCTAGTGGAAGTTAATATTTTCATGTGGTTCCCATCTACTACAG
ATTGCTTCATATACAAGTACAAAGAATATGTAGCTCACTAGCTCCAT------ATATATCCTCTGTAGCTTCTCCTTCAA
CCATTGCAGTGCTTCAAGCTGATTGCTTAGCATGGCATGATATACAACCCTATCGGGTACTTTTTACTAATGAATGTAAT
GTAGATGCAAACGATAATATAATATTCGAGTTTATTTAAGGATATCATCATAGAATTAGGTTGACCAAGAACTAAACATC
T-TTTTC-ATGATTACCTGATTTATGAGACTTGAGAAAAAGACACCGCTTAAGTAAATTGGT
>SNPs
S---SSSSSSSSSSSSSSSSSSSSSS--------------------------------------------S---------
---------------------------------SS---------------S----------------------S------
-----------------------------------S----------S--------------------------------S
--------------------S-----------------S-----------S----------S-S-----------S----
----------S-------S----------------S----------------SS--------------------------
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---------------------------S---------------S------------------------------------
------------S------------------------S-------------------------S----------------
-S---------------S-----S-------S---------------------------S--------------------
------------------------------------------------------------------------------S-
---------------------------S---SSSSS--------------------------------------------
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-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------S-----
----------S---------------------S-----------------------------------------------
-------------------------------------------S-----S------------------------------
-------------------------------------------------------S--------------------S---
-------------S---S--------------------------------------------------------------
-------S---------------------------------------S------------------------S-------
--------------------------------------------------------------------------------
---------------------------------------------------S----S-----------------------
------------------------S--S------------S--S------------------------------------
------------------S-------------------------------------------------------------
------------S------------------------------------------------S------------------
----------------S---------------------------------------------------------------
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-----------------------------------------------------------------------S--------
------------------------------------------------------------S-------------------
---------------S--------------------------------------------SSS---------S-------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S------------------------------------------------------S--
-----------------------------------------------------S--------------------------
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-------------------------------------------------------------------------------S
------------------------------------------S-------------------------------------
-----------------------------------------------------------S--------------------
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---------------------------------------------------------------S----------------
--------------------------S----S-----------S------------------------------------
---------------------------------------------------S----------
>forward_1553
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-------------TGCATTTCCACCGTTCCACT-----------------------------------------------
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>reverse_3174
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-----------------------------------------------------TAGGGGGCAAAGTCACCAAG-------
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