>input_sequence_55461
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-------------------ATGGACTGCCCCAAGCGGAGCGCGAGCGCCGGCCTCCCCGAAGACTCCTTGGTGGAGATCC
TCGCGCGCGTCCCCGCCAGGTCCGTCTACCGCTCCAAGTGCGTCGCGAAGGCATGGCGCGACCTCATCGAAGATCCCCTC
CACCGCAAGAAACTCCCCCAAACCCTACAAGGCTTCTTCCTCATTGACAAGGAGACCCATAGGCAGCGTGTCTGCTTCAC
AAATCTGCTTGATAGATCCGGGCCTCTCCAGATCGACCGTAACCTCGCCTTCCTGAAGGAATCGCCCGGGATTGGGACTC
TCGACTTCTCCGATTCCTGTAACGGGCTCCTCCTCTTCGAGCACAAACTGGAGGCATGGCCATATAATCTATTGGGCTAT
GTCGTATGCAACCCCGCCACGAAGCAGTGGGTGGAGGTGCCCAGAGACGGCCCTCCGCTTCCGTTGTATCTTCGGCAACC
CAAAAGGTTCAACTATTTGGTTTTTGATCCGTCCGTCTCCTCTCACTTCCACCTGGTCCAGTTCACGTGGGAGTTTGTGC
GCTTGGTGAAGTTTGAGGAGGAGGAGCTAGTGGTTGGTCATGATGATGATGATGATGAG------------GAGGAGGAG
GAGGAGGAGGGCGATGAGGAGGAGGAGGTGTCCCGGACGTCAGTGCACGTCTACTCCTCTGAGACTGACAAGTGGACTCA
CACGCAAAGTGACTGGAGTCAAGTCCAAAGTGGCCGGAACAAGCATGATTTGGAAGGATGGCGCCTTCAGGGCTTAATAC
CTGAGAGCTTCTGCTGTGCTGTTCTCAACAGCATGCTGCATTTCATAATTTCGGATGAAGGTCAGATTGCTGCTGTTGAC
ATGCAAGGGGTGACACGAAAGATCATCCCAGTGCCGACGATGGCCGAGAGGCTCCACTGGCTGGAGCCTGGTTGTGTTGC
CCAATCCCAAGGGCGCCTGCACTACATCAGTCAAGCAGTTGATGGTCGACTGTCCATCTGGGTTCTGGAGGGCTATGATA
CACAAGAATGGGTCTTGAAGCATAGTGTGAGCTTTACGGGGCTGTTTAGAGAAAAGAGACGCACAGGCGACACAAAAGAC
TACAGTGTGGTTGCCATGCATCCAGATGGAAATGTGGTTTTCATTGTTCAGGATTGGAACCGAAAGATGATATCATATCA
CACGGACAATAAGCTAGTGAGTGTTATTGGGACATTAAAAAATGATGCTTCAGATATGCATGTTGTAACTTATGTTCCCT
GTTTCTCCGAGTCACCGGCACTCCCAAACAAGCACTGA------------------------------------------
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>chr5A_1_TraesCS5A01G073200
GATCCGACAACCTAGTTGTTTATTCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTTCATGAGCCATAGTAG
TCCGCTATAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGTATGTGATTC
ACTTCGTTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCTCAGA
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCATGTCCCCGTAAGTTAGTGCCACTTTGGATTCACGACTAGTCATGTCGGTCCGGATTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCTCGGGCCATGGTAAGGCGACACCCGTGAGAATACCGTGTGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCAGTGTGACTTAGAATCGGG-TCCTGACAATGCGACACGTTAA
AAAATTCATAAAATTGTCATGTGGACATTAAGCAAATTTATA-GTTTTGCCATGTTTGAAAAAAAAT-GTTATGAATCTG
CCATGACAATTAACTATATGTGGGCTGCTTCCCTA------------------------------AAAAAACTATATGTG
GGCTGCAGCATCTCCTAATCCTGGGCTTTAGATTCCTCTAAAAAAAC--CTAACCGGATGCTGCTGAGTC-ATGAATGCT
CTTCTGTTGTTTCCAGGCACCATCCTCCATTTCTTTCCCTCGAAAAAAAGGCTCCCTCCTCCACGAGACGCGGAGGCACC
ACCGGCCGCCGCCGCCATCTCCGCCCACCTCGACCAT-------------------CTCTTGCGGCAGGTAAGCTGCCCC
CCTCT-CTCTCCTCGCATTCCACTTTCGCATCTCATCCGCTGATATCGCTACACTTCGCAGCTCGCTCCTCCTCCCTCCC
CACCGAC---GGCGGCGGCATGGACTGCCCCAAGCGGAGCGCGAGCGCCGGCCTCCCCGAAGACTCCTTGGTGGAGATCC
TCGCGCGCGTCCCCGCCAGGTCCGTCTACCGCTCCAAGTGCGTCGCGAAGGCATGGCGCGACCTCATCGAAGATCCCCTC
CACCGCAAGAAACTCCCCCAAACCCTACAAGGCTTCTTCCTCATTGACAAGGAGACCCATAGGCAGCGTGTCTGCTTCAC
AAATCTGCTTGATAGATCCGGGCCTCTCCAGATCGACCGTAACCTCGCCTTCCTGAAGGAATCGCCCGGGATTGGGACTC
TCGACTTCTCCGATTCCTGTAACGGGCTCCTCCTCTTCGAGCACAAACTGGAGGCATGGCCATATAATCTATTGGGCTAT
GTCGTATGCAACCCCGCCACGAAGCAGTGGGTGGAGGTGCCCAGAGACGGCCCTCCGCTTCCGTTGTATCTTCGGCAACC
CAAAAGGTTCAACTATTTGGTTTTTGATCCGTCCGTCTCCTCTCACTTCCACCTGGTCCAGTTCACGTGGGAGTTTGTGC
GCTTGGTGAAGTTTGAGGAGGAGGAGCTAGTGGTTGGTCATGATGATGATGATGATGAG------------GAGGAGGAG
GAGGAGGAGGGCGATGAGGAGGAGGAGGTGTCCCGGACGTCAGTGCACGTCTACTCCTCTGAGACTGACAAGTGGACTCA
CACGCAAAGTGACTGGAGTCAAGTCCAAAGTGGCCGGAACAAGCATGATTTGGAAGGATGGCGCCTTCAGGGCTTAATAC
CTGAGAGCTTCTGCTGTGCTGTTCTCAACAGCATGCTGCATTTCATAATTTCGGATGAAGGTCAGATTGCTGCTGTTGAC
ATGCAAGGGGTGACACGAAAGATCATCCCAGTGCCGACGATGGCCGAGAGGCTCCACTGGCTGGAGCCTGGTTGTGTTGC
CCAATCCCAAGGGCGCCTGCACTACATCAGTCAAGCAGTTGATGGTCGACTGTCCATCTGGGTTCTGGAGGGCTATGATA
CACAAGAATGGGTCTTGAAGCATAGTGTGAGCTTTACGGGGCTGTTTAGAGAAAAGAGACGCACAGGCGACACAAAAGAC
TACAGTGTGGTTGCCATGCATCCAGATGGAAATGTGGTTTTCATTGTTCAGGATTGGAACCGAAAGATGATATCATATCA
CACGGACAATAAGCTAGTGAGTGTTATTGGGACATTAAAAAATGATGCTTCAGATATGCATGTTGTAACTTATGTTCCCT
GTTTCTCCGAGTCACCGGCACTCCCAAACAAGCACTGAATGTGTTGCGTTCATCTACACAGAAGATAGCAACTTGGTTAG
ATCTAGTAGAATTGGGTGATATATTATGCCCATGGTTGGA------TGTATCCTTCTCATGCTTTTGGTCCAAGTAATGG
TGCAAGGCAGTTGAGACATTCTTGTCAGGTAGTTTCATGTATGCTAGATTAGTAAATGATGTTGCCCAAGTTGCATATAA
TTTTGAAGT-----GTTAATGCTTCAAATGCTATCTTTTATGTCTCCATGATGATTATAATTGTCTTACATTACTCCTTT
TTCCCTGGCCCTATTAGTGAGTACTAACTGACTTTTTTGTTCCTAAAGACCTGTGTATGTTTTGAGAAGAACTTGGTCCT
GATTATGTTTATATGTGA-------------------------------TGTATGTGATGGGAATACATAAACTGAAGGC
TTACATTAATGCTGAAAGCTGCCTAGTTTCTTTTGAAGGACAATAGGTTCCTAGTTGATGTTGGTTACATGATATTGGTT
TCCACACCAAGTTTTCGCTTATATGCTGCTTAAAAATAACTATTAACTAGTAGAACATTATAATACTA------------
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-------------------------------------------------------GCATACTTCGCCCAGAGCAGATCTT
GCTTGTAGTCGCCGATTGCGTGGGCCTAGTTTAGCAGAGCTGGAGAAGATAACTATGTTCTCTTCTCGCTGACACCAAAT
AGATCTCTTGGTTCCGTATTGAGATGGAACTGGCTATTAACTCTTGACAGCATTGTAAGA--TCTAGAGTGTGGTA----
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---------------------------------------------------------CTAACTGCAACAATGCTCAAGCC
TACTGTTGTGAGCATCGGACCCCAACCTACCTGTCTTATGCAACACACTGTATGTTTCCTTCTGTGTTTTGTTCAGCATA
TGTCTTTCTGCACTAGGTCTTCAAGCTTCAGAACCTGCCCATGCAGCATCAGCCTTTCATGATCCTACCTATGCCAGGAT
ACATTAACTTAACATTAGTAGATCGGCCTTCATGGAGTTTTTCAGGCATTTTTGCATGCAGATTTGCAGAAATAATTGTA
TGTTGTCTGC
>chr5D_1
GATCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGATTC
ACTTCGTTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCCCGGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCCTGTCCCCGTAAGTTAGTGCCACTTTGGGTTCACGACTAGCCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGATAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCGGTGTGACTTAGAATCGGGGTCCTGACAA-------------
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>chr5D_1
GATCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGATTC
ACTTCGTTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCCCGGT
TCACCGGAGTCTTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCCTGTCCCCGTAAGTTAGTGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACATTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCAGTGTGACTTAGAATCGGGGTCCTGACA--------------
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>chr2D_1
GATCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGATTC
ACTTCGTTCCTGTGTCTGTCCCTTCGGGGAAACGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCCCGGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCATGTCCCCGTAAGTTAGTGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCGGTGTGACTTAGAATTGGGGTCCTGACA--------------
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>chr2D_1
GATCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACAGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGATTC
ACTTTGTTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCCCGGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCCTGTCCCCGTAAGTTAGTGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGATGTTACAGGCTAGATCAGTGTGACTTAGAATCGGGGTCCTGACA--------------
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>chr2D_1
GATCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGATTC
ACTTCATTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGCGTCCTGCCTAGCCTGCTACAGCCCGGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCCTGTCCCCGTAAGTTAGAGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCGGTGTGACTTAGAATCGGGGTCCTGACAAT------------
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>chr7D_1
GATCTGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGTTTC
ACTTCGTTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCTCGGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCACGTAT
GCCTGTCCCCGTAAGTTAGTGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCGGTGTGACTTAGAATCGGGGTCCTGACAA-------------
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>chr7D_1
GATCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTTCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGATTC
ACTTCGTTCCTGTGTCTGTCCCTCCGGGGAAATGTCACGCGGTGGCATCCGGAGTCCTGCCTAGCCTGCTACAGCCCGGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCACACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCTTGTCCCCGTAAGTTAGTGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCGGTGTGACTTAGAATCGGGGTCCTGACA--------------
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>chr1D_1
GATCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGATTC
ACATCGTTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCCCGGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCACACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCCTGTCCCCGTAGGTTAGTGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACATTATCATATACGTGAGCCAAAAGGCGCAAACGGTCTCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGTGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGGCTAGATCGGTGTGACTTAGAATCGGGGTCCTGACA--------------
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>chr6D_3
--TCCGACAACCTAGTTGTTTATCCTTGGTAGCCTCTCTTATGGGGAAATGTAGTCTTGTGCTTCCATGAGCCATAGTAG
TCCGCTACAGCCCGGTTCACCGGAGTCCTGCTAGCCCAGCACTACTGCTCCGGAACACTTGACTGGCCGGCATGTGTTTC
ACTTCGTTCCTGTGTCTGTCCCTTCGGGGAAATGTCACGCGGTGACATCCGGAGTCCTGCCTAGCCTGCTACAGCCCAGG
TTCCCGGAGTCCTGTTAGCCCAGTGCTACAGCCCGGATTCGCACGCTGCTGACCGACATGCTCGATGTTGATTCATGTAT
GCCTGTCCCCGTAAGTTAGTGCCACTTTGGGTTCACGACTAGTCATGTCGGCCCGGGTTCTCTGTCATATGGATGCTAGC
GACACTATCATATACGTGAGCCAAAAGGCGCAAACGGTCCCGGGCCATGGTAAGGCGACACCCGTGGGAATACCGTGCGT
GAGGCCGCAAAGTGATATGAGGTGTTACAGACTAGATCGGTGTGACTTAGAATCGGGGTCCTGACAA-------------
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>chr5B_546
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------------------------------------------------------------------ATGCGACACGTTGA
AAAATTCATAAAATTGTCATGTGGACATTATGCAAATTTATAAATTTTGCCGTGTTTGAAAAAAAAGAGTTATGAATCTG
CCATGACAATTAACTATATGTGGGCTGCTTCCCTAAAAAAAACTATATGTGGGCTGCTTCCCTAAAAAAAACTATATGTG
GGCTGCAGTATCTCCTAGTCCTGGGCTTTAGACTCCTCTAAAAAAAATACTAGCCGGATGCTGCTGCGTGAATGAATGCT
CGA-----GTTTCCAGGCTGCATCCTCCATTTC----CCTCGAAAAAAAGGCTCCCCCCTCCACGAGACACGGAGGCACC
ACCGGCCGCCGCCGCCATCTCCGCCCACCTCGACCAT-------------------CTCCTGCGGCCGGTAAGCTGCCTC
CTCTC-CTCTCCTCGCATTCCGCTCTCGCATCGCATCCGCTGATATCGCTACGCTTCGCAGCTC----CTCCTCCCTCCC
CACCGGCGGCGGCGACGGCATGGACTGCCCCAAGCGGAGCGCGAGCGCCGGCCTCCCCGAAGACTCCTTGGTGGAGATCC
TCGCGCGCGTCCCCGCCAGGTCCGTCTACCGCTCCAAGTTCGTCGCGAAGGCCTGGCGCGACCTCATCGAAGATCCCCTC
CACCGCAAGAAACTCCCACAAACCCTACAAGGCTTCTTCTTCATTGACAAGGAGACCCACAGGCAGCGTGTCCGCTTCAC
AAATCTGCTTGATAGATCCGGGCCTCTCCAGATCGACCATAACCTCGCCTTTCTGAAGGAATCTCCCGGGATGGGGACTC
TCGACTTCTCCGATTCCTGTAACGGGCTCCTCCTCTTCGAGCACAAACTGAAGGCATGGCCATATGACCTATTGGGCTAT
GTCGTGTGCAACCCCACCACGAAGCAATGGGCGGAGGTGCCCAGAGACGGCCCTCCGCTTCCGTTGTATCTTCGGCACCC
CAAAAGATACAACTATTTGGTTTTTGATCCGTCCGTCTCCTCTCACTTCCACCTGGTCCAGTTCACGTGGGAGTTTGTGC
GCTTGGTGAAGTTTGAGGAGGAGGAGCTAGTGGTTGGTCATGATGATGATGATGATGAT------------GAGGAGGAG
GAGGAGT---------------------TGTTCCGGACGTCAGTGCACGTCTACTCCTCTGAGACTGGCAAGTGGACTCA
CACGCAAAGTGACTGGAGTCAAATCCAAAGTGACCGGAACAAGCATGATTTGGAAGGATGGCGCCTTCAGGGCTTAATAC
CTGAGAGCTTCTGCTGTGCTGTTCTCAACAGCATGCTGCATTTCATAATTTCGGATGAAGGTCAGATTGCTGCTGTTGAT
GTGCAAGGGGTGACACGAAAGATCATCCCAGTGCCGACGATGGCCGAGAGGCTCCCCTGGCTGGAGCCTGGTTATGTTGC
CCAATCCCAAGGGCGCCTGCACTACATCAGTCAAGCAGTTGATGGTCGACTGTCCATCTGGGTTCTGGAGGGCTATGATA
CACAAGAATGGGTCTTGAAGCATAGTGTGAGCTTTACGGAGCTGTTTAGAGAAAAGAGACGCACAGGCGACACAAAAGAC
TACACTGTGGTTGCCATGCATCCAGATGGAAATGTGGTTTTCATTGTTCAAGATTGGAACCGAAAGCTGATATCATATCA
CATGGACAATAAGCTAGTGAGTATTATGGGGACATTAAAAAATGATGCTTCAGATGTGCATGTTGTACCTTATGTTCCCT
GTTTCTCCGAGTCACCGGCACTTCAAAACAAGCACTGAATGTGCTGCGTCCATCTAG-CAGAAGGTAGCAACTTGGTTAG
ATCTAGTATAATTTAGTGATATATTATGCCCATGGTTGGACTTGGATGTATGATGTATCCTTCT----------------
----------------CATTCTTGTCAGGTAGTTTCATGTATGCTGGATTATTAAATGATGTTGCCCAAGTTGCATATAA
TTTCGAAGTT-AGTGTTAATGCTTCAAATGCTGCCTTTTATGTCTCCGTGATAATTTTCGTACATAGTACCTTCC-----
-----------------------------------------------------------TTTTGAGAAGAACTTGGTCCT
GATTATGTTTATATATGACGTATGGATAAACATATCTTCTATAGCATGGTGTATGTGATGGAAATACTTAAACTGAAGTC
TTGCATTAATGCTAAAAGCTGCCTAGTTTCTTTTGAAGGACAATAGGTTCCTAGTTGATGCTGGTTACATGATATTGGTT
TCCGCACCAATATTTCTCTTGTATGCTGCTGAAAAATAACTAC-------TAGAACATTATAATACTATCCGTTTACAAA
TATAAGATGTTTTAACATTTTTATAAATTGGATGTGTATTGACACGTTTTAGTGTGTTTGTTCACTCATTTCAGTCCGTA
CGCAGTCCATGTGTGCCAGATCCAAAACATCTTATATTTGTGAATGGAGGGAGTAGCACACTTTGCCCAGAGCAGAGCTT
GCTTGTAGACGCTGATTGCTTGGGTCTAGTTTAGCAGAGCTGTAGAAGACGACTATATTCTCTTTTCGCTGACACCAAAT
AGATGTATTGGTTCCATATTAAAATGGAACTGGCCATTAACTCTTGACAACATTGTAAAAGTTCTAGAATATGGTATTAA
GGAGCTGTTCGGGAACCCACCCGCTCCCAGAAATCTAAGAAT--GTGGAGTACCTGCATGCGCGCTCTGCGGTTTTTAGC
TGAAACTCCGCCCGCTCCCGGAGCGGCTGCGTGGAGCGGAGAATCTCCGAACAGGCCCTAACTGTAACAATGCTCGAGCC
AACTGTTG-----ATCGGACCCCAACCTACCTGTCTTATGCAACACACTGTCTATTTCTTTCTGTGTTTTGTTTAGCATA
TGTCTTCCTGCACTAGGTCTTGAAGCTTCAGAACCTGCCCATGCAGCATCGGCCTTTCATGATCCTACCTTTGCCAGGAT
ACATTAACTTAACATCACTACAGCGGCCTTCATGGAGTTTTTCAGGCATTTTTGCACGCAGATTTGCAGAAATAATTGTA
TGTTGTCTGC
>chr5D_554
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--------------------------------------------------------------------------CGTTGG
AAAATTCATAAAATTGTTATGTGGACGTTATGCAAATTTATA-ATTTTGCCATGTTTGAAAAAAAAATGTTATG-ATCTG
CCATGACAATTAACTATATGTGGGCCGCTTCCCTAAAAG-----------------------------AAACTATATGTG
GGCTGCAGCATCTCCTAGTCCTGGTCTTTAGACTCT----AAAAAAC--CTAGCCGGCCTCCTCTAAAAA----AATGCT
ATTCTGTTGTTTCCAGGCTCCATCCTCCATTTCTTTCCCTCGAAAAAAAGGCTCCCTCCTCCACGAGACACGGAGGCACC
ACCGGCCGCCGCCGCCATCTCCGCCCACCTCGACCATCTCCGCCCACCTCGACCATCTCCTGCGGCAGGTAAGCTGCCCC
CCCTCTCTCTCCTCGCAATCCTCTCTCGCATTGCATCCCCTGATATCGCTACGCTTCGCAGCTCGCTCCTCCTCCCTCCC
CACCGGC---GGCGACGGCATGGACTGCCCCAAGCGGAGCGCGAGCGCCGTCCTCCCCGAAGACTCCTTGGTGGAGATCC
TCGCGCGCGTCCCCGCCAGGTCCGTCTACCGCTCCAAGTGCGTCGCGAAGGCCTGGCGCGACCTCATCGAAGACCCCCTC
CTCCGCAAGAAGCTCCCCCAAACCCTACAAGGCTTCTTCTTCATTGACAAGGAGACCCACAGGCAGCGTGTCCGCTTCAC
AAATCTGCTTGATAGATCCGGGCCTCTCCAGATCGACCATAACCTCGCCTTCCTGAAGGAATCGCCCGGGATTGGGACTC
TCGACTTCTCCGATTCCTGTAACGGGCTCCTCCTCTTCGAGCACAAACTGAAGGCATGGCCATATGACCTATTGGGCTAT
GTAGTGTGCAACCCCACCACGAAGCAATGGGCGGAGGTGCCAAGAGACGGCCCTCCGCTTCCGTTGTATCTTCGGCACCC
CAAAAGATACAACTATTTGGTTTTTGATCCGTCCGTCTCCTCTCACTTCCACCTGGTCCAGTTCACGTGGGAGTTTGTGC
GCTTGGTGAAGTTT---GAGGAGGAGTTAGTGGTTGGTCATGATGATGATGATGAGGAGGAGGAGGAGGGCGATGAGGAG
GAGGAGT---------------------TGTCCCGGACGTCAGTGCACGTCTACTCCTCTGAGACTGGCAAGTGGACTCA
CACGCAAAGTGACTGGAGTCAAATCCAAAGTGGCTGGAACAAGCATGATTTGGAAGGATGGCGTCTTCAGGGCTTAATAC
CTGAGAGCTTCTGCTGTGCTGTTCTCAACAGCATGCTGCATTTCATAATTTCGGATGAAGGTCAGATTGCTGCTGTTGAC
ATGCAAGGTGTGACAAGAAAGATCATCCCAGTGCCGACGATGGCCGAGAGGCTCCACTGGCTGGAGCCTGGTTATGTTGC
CCAATCCCAAGGGCGCCTGCACTACATCAGTCAAGCAGTTGATGGTCGACTGTCCATCTGGGTTCTGGAGGGCTATGATA
CACAAGAATGGGTCTTGAAGCATAGTGTGAGCTTTACGGAGCTGTTTAGAGAAAAGAGACGCACAGGCGACACAAAAGAC
TACAGTGTGGTTGCCATGCATCCAGATGGAAATGTGGTTTTCATTGTTCAAGATTGGAACCGAAAGCTGATATCATATCA
CATGGACAATAAGCTAGTGAGTATTATGGGGACATTAAAAAATGATGCTTCAGATGTGCATGTTGTACCTTATGTTCCCT
GTTTCTCCGAGTCACCGGCACTTGAAAACAAGCACTGAATGTGCTGCGTCCATCTAG-CAGAAGGTAGCAACTTGGTTAG
ATCTAGTAGAATTAAGTGATATATTATGCCCATGGTTGGACTTGGATGTATCCTTCTCATTCTTTTGGTCTAAGTAATAG
TGCAAGGCAGTTGAGACATTCTTGTCAGGTAGTTTCATGTATGCTGGATTATTAAATGATGTTGCCCAAGTTGCATATAA
TTTCAAAGTTAAGTGTTAATGCTTCAAATGCTGCCTTTTATGTCTCTGTGATAATTTTCGTACATAGTACCTTCC-----
-----------------------------------------------------------TTTTGAGAGGAACTTGGTCCT
GATTATGTTTATATATGACGTATAGATAAACATATCTTCTATAGCATGGTGTATGTTATGGAAATACTTAAACTGAAGTC
TTGCATTAATGCTAAAAGCTGCCTAGTTTCTTTTGAAGGACAATAGGTTCCTAGTTGATGCTGGTTACATGATATTGGTT
TCCGCACCAATATTTCTCTTGTATGCTGCTGAAAAATAACTAC-------TAGAACATTATAATACTATCCGTTTACAAA
TATAAGATGTTTTAACATTTTTGTAAATTGGATGTGTATTGACACGTTTTAGTGTGTTTGTTCACTCATTTCAGTCCGTA
CGCAGTCCATGTGTGCCAGATCCAAAACATCTTATATTTGTGAATGGAGGGAGTAGCACACTTTGCCCAGAGCAGAGCTT
GCTTGTAGACGCTGATTGCTTGGGTCTAGTTTAGCAGAGCTGTAGAAGACGACTATATTCTCTTTTCGCTGACACCAAAT
AGATGTATTGGT-CCATATTAAAATGGAACTGGCTATTAACTCTTGACAACATTGTAAAAGTTCTAGAGTATGGTATTAA
GGAGCTGTTCGGGAACCCACCCGCTCCCAGAAATCTAAGAATCTGTGGAGTACCTGTATGCACGC-------TTTTTAGC
TGAAACTCCGCCCGCTCCCGGAGCGGCCGCGTGGAGCGGAGAATCTCCGAACGGGCCCTAACTGTAACAATGCTCGAGCC
AACTGTTG-----ATCGGACCCCAACCTACCTGTCTTATGAAACACGCTGTCTATTTCTTTCTGTGTTTTGTTTAGCATA
CGTCTTCCTGCACTAGGTCTTCAAGCTTCAGAACCTGCCCATGCAGCATCAGCCTTTCATGATCCTACCTTTGCCAGGAT
ACATTAACTTAACAT-----------------------------------------------------------------
----------
>SNPs
-----------------------S--------------------------------------------------------
-------S--------------------------------------------------------------S---------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------------S--------------------S----S-----------------------
------------------------------------------------------------------S-------------
------------------------------------------------------------------------------S-
------------------------------S------------S----------------------S-------------
--------------------------------------------------------------------------------
-----------------S--------------S-------------------S----------------S----------
------------------S--------------------------------------------------S----------
-----------------------------------------------------------S--------------------
--SSS----------------S--S-------S-------------------S---------------------------
-----S--------S-----------------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------S-------------------S------------S-------
--------------------------------------S-----------------------------------------
--------------------------------------------------S--------------S-S------------
-----S---------S----------S----S---------------------------------------------S--
------S-S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------SSSSSSSSSSSSSSSSSSSSSS---------------------------------------S------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------S---------------S-------------
--S-------------------S----S---------------------------S-----------S------------
----------------------S-S------------------S-----S------SS------S---------------
-------------SS---------------------------------------------S---------S-------S-
---------------------------------------------S-----S----------------------------
---S----------------------------SS-------------S----S---S-SS-SSSSSSSSSS-S-SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
--------------S----------------------------------------------S-----S----------S-
--S----------S----------------------------------------------S-------------------
---S------SS----S---S---------S-----------SSSSSSSS------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S----S------------S---
--------S---S------S----S-----------------S------SS-----S-------S---------------
----S-S--------S----S-S--------------------------S--------S-----------S---------
--------------------------------------------------------------------------------
----------------------------------------------------------------S----------S----
S-------SSSSS--------------------------------------S-S----S--------------S------
------S---------------------------------------------------------------S---------
---------------S-S--S-S---------------------------------S-----------------------
----------
>forward_377
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ACTAGTCATGTCGGTCCGGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_1694
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ATGAGGAGGAGGAGGTGTCC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_790
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TAACCGGATGCTGCTGAGTC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_1748
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ACAAGTGGACTCA
CACGCAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_993
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CGCATTCCACTTTCGCATCT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_3117
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TCTT
GCTTGTAGTCGCCGAT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
