>input_sequence_55430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ATGGCGACGCCCACGCCCATGGCAGGCGAGGGGACGCTCGCCGGGGTGATGCCGC
TGTTGCCGCCCCCGCCACCGGCGGCGGAGGCGGCCGCGGGGTCGGCGGCCGAGGCGCCGATGCTGATATTCCTCTACTTC
CACAAGGCGATCCGCGCCGAGCTCGAGGGCCTGCACGGCGCCGCCGTGCGCCTCGCCACGGAGCGCGCCGGCGACGTGGG
GGCACTGGCCGAGCGCTGCCGCTTCTTCGTCAACATCTACAAGCACCACTGCGACGCCGAGGACGCGGTACGGCCGCTGC
CCCTCTGCAGAGCTCCGTTTTGTTTGAGGCATTTCGTTTTCCTCCGTTTTACCCCCCTGTAGCTGG-TGTGAATTTGGGT
ATGGGCTATGGAGATGCGTGGGCGCGTACGAATATTGGTGCTGTTTTGGGTTTAGGGTTGGGGAATTGTTCCCTTCGGTC
TGAAGGAGCTGGGCGGGGTTGGGATTGAATCGTTCGACCACTGTTAGGATCTGAATCCGGTGGACTCCATACCATGATGT
TGAATCTTCTTCGGGTAGCTTTTGATGCAGCAGTGGACAGTATAAGGTTGTTTGGCTGAATCAGCCTATGCTCACATGAA
TAATTTGTCGCACTTTTTGCCCTTCTGGCTTCTGATGTTGACATAAGGAGATGATGCCCAAATTGTATAAGCCATGATAC
AAAAGCCTCCGTTCAATTGAAACCACAATGGTAATTTTGATATTGACATCATCATGTGAGGCCTTCT---CTTTCTTGCT
TCCATGGTGATGTTTTCTCACTTTCATTAGAGCACAACGGAACTTTTACTGATCGAGTCGGATAGAGCTTTCTTAGTTTC
AACCTGTTAGAGTCAGGGGCTAATGGAGGTCAGGTCCTTCCTAGACTTTTTTTGCTTAAATCTTGTTACCCTGCAGAATG
ATAATAGATCATCAGTATTCTTTAGTGGCAGAGAGTCTAACTGACAAGTAAATGCACCTTGATGTCCTATTTTCCCTCGA
ATGCCGCAAAAATAGAAGTTCTGTTTTGAAGCACAAAAATGTTAGTGCTGTTGTAAACTTCTTTTACCTTGACCATTTTC
TTCATGGGAAGAGCTGTCATAGTTGCTTGTTCAAATCTGTTTTGGCAATCTATCTTTCTAATGCTTTATTGTTTATGCTT
TGCTTTTTAGAAATATTGTGCAGTTTAGTTATGAGTTCATCATATCATATTTTTTGTACTAAAAACATGCTCATACTTTT
TGG-TTTGACAATTGCAGGTTATCTTTCCAGCACTTGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr3A_1_TraesCS3A01G262600
TTGTTGGTCATACATGGTATGGATTTGTGGCGAGTTTATGGAATTTCTAGATGTTGCCAAATGAGTTAATCTTCTATGTC
CTCGGGAAGAAGTCGTAGAATTCATCGGTATTTTATCTTTTGGTATAATTTTCAATCTAAAAAGTGTGCGTGCTTGATTG
CTCGAGTACCATTAATTTGCTATGTCCCATGGTGCTTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGGATTTACA
ATTCATTTAAAGTTAGAGGATTACTCCATATGCTAACCAAACAAAATTTTCGATGTCTCGGTGACTGTTCACACCTTGGT
CAATCAGATTGTTCGCTTATGGAGCTTTCTTATTGTTTAGTAATATAAAATTATACATCTTTACCAAAATAACACACCTC
GTCCTGTTCATACTTAATCAATGCTATAACCCACATTGTGCTTTTTCATGCGTTCTACTATCTC-CCAAGGACAAATGGC
ACAAATCCATGAAAATAGTCTCTTTCAGGTGGACCCATTCTATTTCAGACTTCCTGATTCTTTCCTGCTTCAATCTTGTA
------------------------------------------------------------------TAATGTAGTTGCAA
TTTTTCCATCTGAGAATACCTAACCAAATACTCAAAATATTCAGAACAAACAACTGGGACAACAATAACGTGTCCTCAAC
CTAGGTATAAAAAA------------------------------------------TAATCACAGAGAGGACAAGAAGGC
GAAAA-AATAATTTCAGCATGTCATCCTATAGAAGGCCTAATCAAACACCGAGAATACTTTCAAAACAACAACTACAAGA
AGAGCAGTGTCTCCTCAACCTAGTCTTCTCCTAGCCTCCTAGGTAGAAAAATAACCACACAGAGGACAAGAAGA---GGG
GAAATAAAAATAAATAAGTTCAGCACGGCGAGCGAAAGAGACCCCCGCAGAAGCCAACGCGACGCCAAATCCATTCCTCT
TCCCTCTCCACAGGCTGAGACGAAGCCAACCGAAGCGAGCACGAACACCCTAGGCGCGCGCGCTCAGAGCCGTGGCGGAG
TCGTCGGGCTCGCCGTAGGCAGCGGATGGCGACGCCCACGCCCATGGCAGGCGAGGGGACGCTCGCCGGGGTGATGCCGC
TGTTGCCGCCCCCGCCACCGGCGGCGGAGGCGGCCGCGGGGTCGGCGGCCGAGGCGCCGATGCTGATATTCCTCTACTTC
CACAAGGCGATCCGCGCCGAGCTCGAGGGCCTGCACGGCGCCGCCGTGCGCCTCGCCACGGAGCGCGCCGGCGACGTGGG
GGCACTGGCCGAGCGCTGCCGCTTCTTCGTCAACATCTACAAGCACCACTGCGACGCCGAGGACGCGGTACGGCCGCTGC
CCCTCTGCAGAGCTCCGTTTTGTTTGAGGCATTTCGTTTTCCTCCGTTTTACCCCCCTGTAGCTGG-TGTGAATTTGGGT
ATGGGCTATGGAGATGCGTGGGCGCGTACGAATATTGGTGCTGTTTTGGGTTTAGGGTTGGGGAATTGTTCCCTTCGGTC
TGAAGGAGCTGGGCGGGGTTGGGATTGAATCGTTCGACCACTGTTAGGATCTGAATCCGGTGGACTCCATACCATGATGT
TGAATCTTCTTCGGGTAGCTTTTGATGCAGCAGTGGACAGTATAAGGTTGTTTGGCTGAATCAGCCTATGCTCACATGAA
TAATTTGTCGCACTTTTTGCCCTTCTGGCTTCTGATGTTGACATAAGGAGATGATGCCCAAATTGTATAAGCCATGATAC
AAAAGCCTCCGTTCAATTGAAACCACAATGGTAATTTTGATATTGACATCATCATGTGAGGCCTTCT---CTTTCTTGCT
TCCATGGTGATGTTTTCTCACTTTCATTAGAGCACAACGGAACTTTTACTGATCGAGTCGGATAGAGCTTTCTTAGTTTC
AACCTGTTAGAGTCAGGGGCTAATGGAGGTCAGGTCCTTCCTAGACTTTTTTTGCTTAAATCTTGTTACCCTGCAGAATG
ATAATAGATCATCAGTATTCTTTAGTGGCAGAGAGTCTAACTGACAAGTAAATGCACCTTGATGTCCTATTTTCCCTCGA
ATGCCGCAAAAATAGAAGTTCTGTTTTGAAGCACAAAAATGTTAGTGCTGTTGTAAACTTCTTTTACCTTGACCATTTTC
TTCATGGGAAGAGCTGTCATAGTTGCTTGTTCAAATCTGTTTTGGCAATCTATCTTTCTAATGCTTTATTGTTTATGCTT
TGCTTTTTAGAAATATTGTGCAGTTTAGTTATGAGTTCATCATATCATATTTTTTGTACTAAAAACATGCTCATACTTTT
TGG-TTTGACAATTGCAGGTTATCTTTCCAGCACTTGATATACGAGTCAAGAATGTCGCTGGAACGTATTCTCTAGAGCA
TAAAGGCGAAAATGACCTCTTTACCCAGCTTCTTGCTTTATTACAACTCGATATTCAAAATGACGATGCTCTTCGGAGGG
AACTTGCATCCTGCACAGGAGCCATACAAACGTGCCTCACCCAGCATATGTCCAAGGAAGAAGAACAGGTCAGTGCCATA
TTTCCTTTTTAAACGGCCTCTTATCATATTAAGCAGTTCATATCCAACTAGATAAGGAAAACAGTATGCTGCTCAGTATC
TTATGTTTGAACCAA---TTTTGTTCTAGGGCAAGTGCATTCTATGACAGTGTCACCATTCAAAAGTTGTTCTTAATGCC
TGTTTGTGCTCTTATTAGGCATTTTATGAAGGTGCTCATTTGTTGTAATCGTGTCGAGAAGTCCTTAGCAAAATCATCTT
ATTACTAGGCTGTCCAACTTTCTTGCCCCTTTTTACAACATTTGAATGCTCACGATCTCCTTTATGACGGTGCTAACGGT
TATAGGATGGCAAATCAAGCTGGCAAGCTTTTACTTTTAAGTATTTTGAGTGATTCTATGATATACTTTCCTGTTATTAC
CTTGATGT---------------------CAGTAAGGATAGGTGCAAACAGAGAAGTGATGGTAGTGGGACATATGTGGT
CTTCTAGTTGCTACTCTACCGTCATTGTTTTCTCAAGTTATCACCAAGGGTTCGTATGCCAGTTTCTGTATTCTGATTAA
AGGGTCACACAGCTCTCGGTGTCATGCAGGCATCTTGGACTGTATTACTCTTATTCTGCATTTTTGAAATCCCGGACTTC
ATGTTCTGATCAGAAGTGTTTACCTTATATGTGGATCCCATTTAAATAAGCTAC--ATCAACCTGTGCACCTACACGGGC
TGCATATAAACAATACTTTA----------TACATCTTAACGTAAAGGCGATTCTCTAAGGATATTTGA------TGCAT
TTTTCTATCTGATTACACTTTTACACATATCCCTTTGCCA
>chr3A_1
TTGTTGGTCATACATGGTATGGATTTGTGGCGAGTTTATGGAATTTCTAGATGTTGCCAAATGAGTTAATCTTCTATGTC
CTCGGGAAGAAGTCGTAGAATTCATCGGTATTTTATCTTTTGGTATAATTTTCAATCTAAAAAGTGTGCGTGCTTGATTG
CTCGAGTACCATTAATTTGCTATGTCCCATAGTGCTTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGGATTTACA
ATTCATTTAAAGTTAGAGGATTACTCCATATGCTAACCAAACAAAATTTTCGATGTTTCGGTGACTGTTCACACCTTGGT
CAATCAGATTGTTCACTTATGGAGCTTTCTTATTGTTTAGTAATATAAAATTATACATCTTTACCAAAATAACACACCTC
GTCCTGTTCATACTTAATCAATGCTATAACCCACATTGTGCTTTTTCATGCGTTCTACTATCTC-CCAAGGACAAATGGC
ACAAATCCATGAAAATAGTCTCTTTCAGATGGGCCCATTCTATTTCAGACTTCCTGATTCTTTCCTGCTTCAATCTTGTA
------------------------------------------------------------------TAATGTAGTTGCAA
TTTTTCCATCTGAGAATACCTAACCAAATACTCAAAATATTCAGAACAAACAACTGGGACAACAACAACGTGTCCTCAAC
CTAGGTATAAAAAA------------------------------------------TAATCACAGAGAGGACAAGAAGGC
GAAAA-AATAATTTCAGCATGTCATCCTATAGAAGGCCTAATCAAACACCGAGAATACTTTCAAAACAACAACTACAAGA
AGAGCAGTGTCTCCTCAACCTAGTCTTCTCCTAGCCTCCTAGGTAGAAAAATAACCACACAGAGGACAAGAAGA---GGG
GAAATAAAAATAAATAAGTTCAGCACGGCGAGCGAAAGAGACCCCCGCAGAAGCCAACGCGACGCCAAATCCATTCCTCT
TCCCTCTCCACAGGCTGAGACGAAGCCAACCGAAGCGAGCACGAACACCCTAGGCGCGCGCGCTCAGAGCCGTGGCGGAG
TCATCGGGCTCGCCGTAGGCAGCGGATGGCGACGCCCACGCCCATGGCAGGCGAGGGGACGCTCGCCGCGGTGATGCCGC
TGTTGCCGCCCCCGCCACCGGCGGCGGAGGCGGCCGCGGGGTCGGCGGCCGAGGCGCCGATGCTGATATTCCTCTACTTC
CACAAGGCGATCCGCGCCGAGCTCGAGGGCCTGCACGGCGCCGCCGTGCGCCTCGCCACGGAGCGCGCCGGCGACGTGGG
GGCACTGGCCGAGCGCTGCCGCTTCTTCGTCAACATCTACAAGCACCACTGCGACGCCGAGGACGCGGTACGGCCGCTGC
CCCTCTGCAGAGCTCCGTTTTGTTTGAGGCATTTCGTTTTCCTCCGTTTTACCCCCCTGTAGCTGG-TGTGAATTTGGGT
ATGGGCTATGGAGATGCGTGGGCGCGTACGAATATTGGTGCTGTTTTGGGTTTAGGGTTGGGGAATTGTTCCCTTCGGTC
TGAAGGAGCTGGGCGGGGTTGGGATTGAATCGTTCGACCACTGTTAGGATCTGAATCCGGTGGACTCCATACCATGATGT
TGAATCTTCTTCGGGTAGCTTTTGATGCAGCAGTGGACAGTATAAGGTTGTTTGGCTGAATCAGCCTATGCTCACATGAA
TAATTTGTCGCACTTTTTGCCCTTCTGGCTTCTGATGTTGACATAAGGAGATGATGCCCAAATTGTATAAGCCATGATAC
AAAAGCCTCCGTTCAATTGAAACCACAATGGTAATTTTGATATTGACATCATCATGTGAGGCCTTCT---CTTTCTTGCT
TCCATGGTGATGTTTTCTCACTTTCATTAGAGCACAACGGAACTTTTACGGATCGAGTCGGATAGAGCTTTCTTAGTTTC
AACCTGTTAGAGTCAGGGGCTAATGGAGGTCAGGTCCTTCCTAGACTTTT-TTGCTTAAATCTTGTTACCCTGCAGAATG
ATAATAGATCATCAGTATTCTTTAGTGGCAGAGAGTCTAACTGACAAGTAAATGCACCTTGATGTCCTATTTTCCCTCGA
ATGCCGCAAAAATAGAAGTTCTGTTTTGAAGCACAAAAACGTTAGTGCTGTTGTAAACTTCTTTTACCTTGACCATTTTC
TTCATGGGAAGAGCTGTCATAGTTGCTTGTTCAAATCTGTTTTGGCAATCTATCTTTCTAATGCTTTATTGTTTATGCTT
TGCTTTTTAGAAATATTGTGCAGTTTAGTTATGAGTTCATCATATCATATTTTTTGTACTAAAAACATGCTCATACTTTT
TGG-TTTGACAATTGCAGGTTATCTTTCCAGCACTTGATATACGAGTCAAGAATGTCGCTGGAACGTATTCTCTAGAGCA
TAAAGGCGAAAATGACCTCTTTACCCAGCTTCTTGCTTTATTACAACTCGATATTCAAAATGACGATGCTCTTCGGAGGG
AACTTGCATCCTGCACAGGAGCCATACAAACGTGCCTCACCCAGCATATGTCCAAGGAAGAAGAACAGGTCAGTGCCATA
TTTCCTTTTTAAACGGCCTCTTATCATATTAAGCAGTTCATATCCAACTAGATAAGGAAAACAGTATGCTGCTCAGTATC
TTATGTTTGAACCAA---TTTTGTTCTAGGGCAAGTGCATTCTATGACAGTGTCACCATTCAAAAGTTGTTCTTAATGCC
TGTTTGTGCTCTTATTAGGCATTTTATGAAGGTGCTCATTTGTTGTAATCGTGTCGAGAAGTCCTTAGCAAAATCATCTT
ATTACTAGGCTGTCCAACTTTCTTGCCCCTTTTTACAACATTTGAATGCTCACGATCTCCTTTATGACGGTGCTAACGGT
TATAGGATGGCAAATCAAGCTGGCAAGCTTTTACTTTTAAGTATTTTGAGTGATTCTATGATATAC--------------
-------TTTCCTGTTATTACCTTGATGTCAGTAAGGATAGGTGCAAACAAAGAAGTGATGGTAGTGGGACATATGTGGT
CTTCTAGTTGCTACTCTACCGTCATTGTTTTCTCAAGTTATCACCAAGGGTTCGTATGCCAGTTTCTGTATTCTGATTAA
AGGGTCACACAGCTCTCGGTGTCATGCAGGCATCTTGGACTGTATTACTCTTATTCTGCATTTTTGAAATCCCGGACTGC
ATGTTCTGATCAGAAGTGTTTACCTTATATGTGGATCCCATTTAAATAAGCTAC--ATCAACCTGTGCACCTACACGGGC
TGCATATAAACAATACTTTA----------TACATCTTAACGTAAAGGGGATTCTCTAAGGATATTTGA------TGCAT
TTTTCTATCTGATTACACTTTTACACATATCCCTTTGCCA
>chr3D_1
TTGTTGGTCAT--ATGGTATGGATTTGTGACTAGCTTATGGAATTTCTAGATGTTGCCAAAGGAGTTAATCTTCTCTATT
CTCGGGAAGAAGTCATAGATTTCATCGGTATCTTATCTTTCGGTATAATTTTCAATCTAAAAAGCGTGCGTGCTTG-TTG
CTCGAGTACCATTACTTTGCTATGTCACATGGTGCTTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGGATTCACA
ATTTATCTGAAGTTAGATGATCACTCCATATGCTAACCAAACAAAATTTCCAAAGTCTCGGTGACTGTTCATACCTTGAT
CAATTAGATTGTTCGCTTATGGAGCATTCTTATTGTCTAGCAATATGAAATTATATATTTTGACCAAAATAACACGCCTC
GTTCTGCTCATGCTTGATCAATGCTATAACCCACATTGTGTTTTTCACA-CGTTCATTC----C-CCAAGGACAAATGGC
ACAAATCCATGAAAATAGTCCCTTCCAAGTGGGTTCATTCTATTTCATACTTCCTGATTTTTTCATGCTTCAATCTAGTA
CCCCCTTGGTCCCATAATGTAAGAGCGTTTTACACACTAGTCTTATATTATGGGAGGGGGGAAGTATAATATAGTTGCAG
TTTTTCTATCCCAGAATACCTAACCAAATACTCAAATATTT-------------TGGGACAAAAACAACGTGTCCTCAAT
CTAGGTATAGAAAA------------------------------------------TAATCACACAGAGGACAAGAAGGC
GAAAATAATAATTTCAGCATGTCATCCT--AGAAGGCCTAATCAAACACCGAGAATACTTTCAAAACAAC---TACAAGA
ACAGGAGCGTCTCCTCAACCTAGTCTTCTCCTA---------GTAGAAAAATAACCACACAGAGGACAAGAAGA---GGG
GAAATAAAAATAAA----TTGAGCACGGCGAGCGAAAGAGACCCCCGCAGAAGCCAACGCGACGCCAAATCCATTCCTCT
TCCCTCTCCACAGGCTGAGACGAAGCCAACCGAAGCGAGCACGAACACCCTAGGCGCGCGCGCTCAGAGCCGTGGCGGAG
TCGTCGGGCTCGCCGTAGGCAGCGGATGGCGACGCCCACGCCCATGGCCGGCGAGGGGACGCTCGCCGCGGTGATGCCGC
TGTCGCCGCCCCCGCCGGCGGCGGCGGAGGCGGCCGCGGGGTCGGCGGCCGAGGCGCCGATGCTGATATTCCTCTACTTC
CACAAGGCGATCCGCGCCGAGCTCGAGGGGCTGCACGGCGCCGCCGTGCGCCTCGCCACGGAGCGCGCCGGCGACGTGGG
GGCACTGGCCGAGCGCTGCCGCTTCTTCGTCAACATCTACAAGCACCACTGCGACGCCGAGGACGCGGTACGGCCGCTGC
CCCTCTGCAGAGCTCCGTTTTCTTTGAGGCATTTCGTTTTCCTCTGTTTTATCCCCCTGTAGCCGGTTGTGAATTTGGGT
ATGGGCTATGGAGATGCGTGGGCGCGTACGAATATTGGTGTTGTTTTGGGTTTAGAGTTGCGGAATTGTTCCCTTCGGTC
TGAAGGAGCTGGGCGGGATTGGGATTGAATCGTTCGACCACTGTTAGGATCTGAATCCGGTGGACTCCATACCATGATGT
TGAATCTTCTTCGGGTAGCTTTTGATGCAGCAGTGGACAGTATAAGGTTGTTTGGCTGAATCAGCCTATGCTCACATGAA
TAATTGGTCACACTTTTTGCCCTTCTGGCTTCTGATGTTGACATAAGGAGGTGATGCCCAAGTTGTATAAGCCGTGATAC
AAAAGCCTCCGTTCAATTGAAACCACAATGGTAATTTTGATATTGACATCATCATGTGAGGCCTTCT---CTTTCTTGCT
TCCATGGTGATGTTTTCCCACTTTCATTAGAGCACAACGT-ACTTTAACGGATCGAGTCGGATAGAGCTTTCTTAGTTTC
AATCTGTTAGAGTCAGGGTCTAATGGAGGTCAGGTCCTTCA-AGACTTTT-GTGCTTAAATCTTGTTACCCTGCAGAATG
ATAATAGATCATCACTATTGTTTAGTGGCAGAGAATCTAACTGACAAGTAAATGCACCTTGATGTCCTATTTTCCCTCAA
ATGCTGCAAAAATAGAAGTTCTGTTTTGAAGCACAAAAACATTAGTGCTGTTGTAAACTTCTTTTACCTTGACCATTTTC
TTCATGGGAAGAGCTGTCATAGCTGCTTGTTCAAATCTATTTTGGCAATCTATCTTTCTAATGCTTCATTGTTTATGCTT
TGCTTTTTAGAAATATTGCGCAGATTAGTTATGAGTTCTTCATATCGTATTTTTTGTACT-AAAACATGCTCATACTTTT
TTGTTTTGACTATTGCAGGTTATCTTTCCAGCACTTGATATTCGAGTCAAGAATGTCGCTGGAACGTATTCTCTAGAGCA
CAAAGGCGAAAATGACCTCTTTACCCAGCTTCTTGCTTTATTACAACTTGATATACAAAATGACGATGCTCTTCGGAGGG
AACTTGCATCCTGCACAGGAGCCATACAAACGTGCCTCACCCAGCATATGTCCAAGGAAGAAGAACAGGTCAGTAGCATA
TTTCCTTTTTAAACGGCCTCTTATCATATTAAGCAGTTCATATCCAACTAGATAAGGAAAACAGTATGCTGCTCAGTCTC
TTATGTTTGAACCAA---TTTTGTTCTAGGGCAAGTGGATTCTATGACAATGTCACCATTCAAAAGTTGTTCTTAATGTC
TGTTCATGCTCTTATTAGGCATTTTATGAAGGTGCTCATTTGTTGTAATTGTGTCGAGAAGTCCTTAACAAAAGCATCTT
ATTACTAGGCTGTCCAACTTTCTTGCCCCTTTTTACAACATTTGAATGCTCACGATCTCCTTTATGACAGTGCTAACAGT
TATAGGATGGCAAATCAAGCTGGCAAACTTTTACTTTTAAGTATTTTGAGAGATTCTATGGTATAC--------------
-------T---------------------CAGTAAGGATAGGTGGAAACAGAGAAGTGATGGTAGTGGGACATATGTTGT
CTTCTAGTTGCTACTCTATCGTCATTGTTTTCTTAAGTCATTACCAAGGGTTCGTACGCCAGTTTCTGTATTCTGATTAA
AGGGTCACACAGCTCTCGGTGTCATGCAGGCATCTTGGACTGTATTACTCTTATTCTGCATTTTTGAAATCCCGGACTGC
ATGTTCTGATCAGAAGTGTTTAGCTTATATGTGGATCCCATTTAAATAAGCTAGTTATCGACCTATGCACCTACACGGGC
TGCATATAA----------A----------TACCTCTTAACGTAAAGGGGAGTCTCTAAGGATATTTGATTGATGTGCAT
TTTTCTATCTGATTACACTT-CACACATATC---------
>chr3B_9
--------CATACATGGTATGGATTTGTGGCGAGCTCATGGAATTTCTAGAGATCACCAAAGGAATTACTCTTCTGTGTC
CTCGGGAAGAAGTTATAGATTTCATCGGTATTTCATTTTCTAGTGAAAATTTCAATCTAAAA-----GCGTGCTTGAGTG
CTCGAGTACCATTAATTTGCTATGTCACATGGTACTTGTGTCAATCAGATTGTTCGCTTATGTAGCATTCTTATTGTTTA
GTAATGTATAAAACTATTTTTTTTACCAAAATAACACACCTCCTCATGTTCATGCTTAATCAATGCTATAACCCACAATG
TGCTTTGTCATGCATTCAATCCCCCAAGGACAAATGGCATAAATCCATGAAAATAGTCTCTTTCAAGTGGGTTCATTCTA
TTTCAGACTTCCTAATTCTTTCCTGCTTCAATCTAGTATAATGTAGCGTTGCGAGTGCTCAGGCAACGTGCGCGCGGTGG
GACCCGCCTAGGTTGTGGGCTCTGTAGGCCAGTCCCCCAAATGATGGTCTTGCGTGTTCAGAGTCCACGTGCGGCTTGTC
GGTTTGACGCGTATTTATTGTCTTCGAGATGCACCGCTCTGATACAAAGAGTAAGGCGCCTGCATTGCCCCAGATCCAGC
TCTTTCACATCGCACCCCTGCACACAGAAGAAGGCACCCACGCTGCCATAGGCCCATCACTGTGCCACCCATCTCCCTTT
CTCTCCCTGCGAGGCAATGGTCGGCGACAACAACGCGTTGGGCCTGAAAGAGCAGGCAGTGCGAGAGGCCGCCATGGCCC
TCAACGGGCGCCGCGCCGCGGCGACACTGGTTTTCTCCAAATCGGCCATGGTTCGACTACAGTCTACCTCGTCCCTCTCT
CTCCGGGGCTGATTTTAAAAAGTAGATCTGAACTCCAAGCAAAATCATGGGCTTTCCTGAAAATTGTTTTTGTTGGTCAT
ACATGGTATGAATTTGTGGCAAGGTTATGGAATTTCCAGACGTTGCCAAAGGAGTTAATCTTCTCTGTCCTCAGGAAGAA
GTCGTATATCATTGGTATTTTATCTTTCGGTACAATTTTCAATCTAAAAAATGTGCATGCTTGATGCTTGTGGATTCAAA
ATTCATCTGTAGTCAAAGGATTACTCCATATACTAATCAAACAAAATTTCCAAAGTCTCAGTGACTGTTCACACCTTGGT
CAATCAGATTGTTCGCTTATGGAGCATTCGTATTATTTAGTAATATAAAATTATATATTTTTACCAAAATAATATGCATC
GTTCTAGTCATGATTGATCAATGCTATAACCCACATTGTGCTTTTTCATGCGTTCATTC----CTCCAAGGACAAATGTC
ACAAATCCTTGAAAATGGTCCCTTTCAAGTGGGTTCATTCTATTTCAGACTTCCTGATTCTTTCATGCTTCAATCTAGTA
------------------------------------------------------------------TAATGTAGTTACAA
TTTTTCTATCTCAGAATACCTAATCAAATACACAAAATATTCAGAACAAACAACTGGGACAACAACAACGTGTCCTCAAC
CTAGGTATAAAAAAACCCCGCAAAAAGAAAAAACAACACACCCAGGTATAAAAAATTAATCACACAGAGGACAAGAAGGC
GAAAATAATAATT-CAGCATGTCATCCT--AGAAGGCCTAATCAAACACCGAGAATGCTTTCAAAACAACAACTACAAGA
ACAGTAGCGTCTCCTCAACCTAGTCTTCTCCTA--------GGTAGAAAAATAACCACACAGAGGACAAGAAGAAGAGGG
GAAATAAAAATAAA----TTCAGCACGGCGAGCGAAAGAGACCCCCGCAGAAGCCAACGCGACGCCAAATCCATTCCTCT
TCCCTCTCCACAGGCTGAGACGAAGCCAACCGAAGCGAGCACGAACACCCTAGGCGCGCGCGCTCAGAGCCGTGGCGGAG
TCGTCGGGCTCGCCGTACGCAGCGGATGGCGACGCCCACGCCCATGGCCGGCGAGGGGACGCTCGCCGCGGTGATGCCGC
TGTCGCCGCCCCCGCCGGCGGCGGCCGAGGCGGCCGCGGGGTCGGCGGCCGAGGCGCCGATGCTGATATTCCTCTACTTC
CACAAGGCGATCCGCGCCGAGCTCGAGGGGCTGCACGGCGCCGCCGTGCGCCTCGCCACGGAGCGCGCCGGCGACGTTGG
GGCACTGGCCGAGCGCTGCCGCTTCTTCGTCAACATCTACAAGCACCACTGCGACGCCGAGGACGCGGTACGGCCGCTGC
CCCTCTGCAGAGCTCCGTCTTGTTTGAGGCATTTCGTTTTCCTCTGTTTTACCCCCCTGTAGCTGG-TGTGAATTTGGGT
ATGGGCTATGGAGATGCGTGGGCGCGTACGAATATTGGTGCTGTTTTGGGTTTAGGGTTGCGGAATTGTTCCCTTCGGTC
TGAAGGAGCTGGGCGGGATTGGGATTGAATCGTTCGACCACTGTTAGGATCTGAATCCGGTGGACTCCATACCATGATGT
TGAATCTTCTTCGGGTAGCTTTTGATGCAGCAGTGGACAGTATAAGGTTGTTTGGCTGAATCAGCCTATGCTCACATGAA
TAATTGGTCGCACTTTTTGCCCTTCTGGCTTCTGATGTTGACATAAGGAGATGATGCTCAAATTGTATAAGCCGTGATAC
-AAAGCCTCCGTTCAATTGAAACCACAATGGTAATTTTGATATTGACATCATCATGTGAGGCCTTCTTCTCTTTCTTGCT
TCCATGGTGATGTTTTCTCACTTTCATTAGAGCACAACGGAACTTTTACGGATCGAGTCGGATAGAGCTTTCTTAGTTTC
AACCTGTTAGTGTCAGGGGCTAATGGAGGTCAGGTCCTTCA-AGACTTTT-TTGCTTAAATCTTGTTACCCTGCAGAATG
GTAATAGATCATCAGTATTGTTTAGTGGCAGAGAGTCTAACTGACAAGTAAATGCACCTTGGTGTCCTATTTTCCCTCGA
ATGCCGCAAAAATAGAAGTTCTGTTTTGAAGCACAAAAACATTAGTGCTGTTGTAAACTTCTTTTACCTTGACCATTTTC
TTCATGGGAAGAGCTGTCATAGTTGCTTGTTCAAATCTGTTTTGGCAATCTATCTTTCTAATGCTTTATTGTTTATGCTT
TGCTTTTTAGAAATATTGTGCAGATTAGTTATGAGTTCTTCATATCATTTTTTTTGTACTAAAAACATGCTCATACCTTT
TGG-TTTGACAATTGCAGGTTATCTTTCCAGCACTTGATATACGAGTCAAGAATGTCGCTGGAACGTATTCTCTAGAGCA
TAAAGGCGAAAATGACCTCTTTACCCAGCTTCTTGCTTTATTACAACTCGATATTCAAAATGACGATGCTCTTCGGAGGG
AACTTGCATCCTGCACAGGAGCCATACAAACGTGCCTCACCCAGCATATGTCCAAGGAAGAAGAACAGGTCAGTGCCATA
TTTCCTTTTTAAACAGCCTCTTATCATATTAAGCAGTTCATATCCAACCAGATAAGGAAAACAGTATGCTGCTCAGTCTC
TTATGTTTGAACCAATTTTTTTGTTCTAGCGCAAGTGCATTCTATGACAGTGTCACCATTCAAAAGTTGTTCTTAATGTC
TGTTTGTGCTCTTATTAGGCATTTTATGAAGGTGCTCATTTGTTGTAATCGTGTCGAGAAGTCCTTAGCAAAATTATCTT
ATTACTAGTCTGTCCAACTTTCTTGCCCCTTTTTACAACATTTGAATGCTCACGATCTCCTTTATGACGGTGCTAACGGT
TATAGGATGGCAAATCAAGCTGGCAAACTTTTACTTTTAAGTATTTTGAGAGATTCTATGATATAC--------------
-------TTCCCCGTTATTATCTTGATGTCAGCAAGGTTAGGTGCAAACAGAGAAGTGATGGTAGTGGGACATATGTGGA
CTTCTAGTTGCTACTCTACCGTCATTGTTTTCTCAAGTTATTACCAAGGGTTCGTATGCCAGTTTCTGTATTCTGATTAA
AGGGTCACACAGTTCTCGGTGTCATGCAGGCATCTTGGACTGTATTACTCTTATTCTGCATTTTTGAAATCCCGGACTGC
ATGTTCTGATCAGAAGTGTTTACCTTATATGTGGATCCCATTTAAATAAGCTAC--ATCAACCTGTGCACCTACACGGGC
TGCATATAA----------ACAATACTTTATACATCTTAACGTAAAGGGGATTCTCTAAGGACATTTGATTGATGTGCAT
GTTTCTATCTGATTACACTT-TACACATATCCCTTTG---
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------SSSSSSSSSSSSSS
SSSSSSS-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
----------------------------------------
>forward_1586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGAACAAACAACTGGGACAACAAT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_2850
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGATCGAGTCGGATAGAGCT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>forward_2850
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGAGCACAACGGAACTTTTACT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_3923
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TGATGTCAGTAAGGATAGGTGCA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
