>input_sequence_55399
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-------------------------------------------------------------------CGACGGAGGAGTA
CGTATAGTCCAACACGGTTGAGCCGCCGGCATAATTACACGCGCTGGTCAGCGATTAGCAGAGACGACGTCGTGGCGTCT
TGGATTTCTGCTCTAGGTTCATCT--GCTTGGTGTGGTGCTGGTGCACCAGCCGGGACCTCTCAGTTGGACCAATGGCGG
TCAACCACGCACGAGA--CCCACCGTCCAACGGAACCATGACCACGCCCGAGGCGGCATGCAAGCGCAACACCTGAAAGC
GCGTTGTCCGTGGCACGGTGGCATGGCAGGCAGGGCAGTTCAGCTGTCTTCATACTGGTTTCCTTTCGCTTTCTCTTCTT
CTCCCCCCAG-GTCGACCGACGCGGGTAAGCAACCGTGTGTGTGCAGCTCCTATAAAGGCAGACGCCCGGCAATGCAGTC
TTCATAATCCTACCCATTCCCTTCATCTTCATAGCAGCAAAGCCTCTTTTCCTCATCCTCCCCTACTGTTCTTGATCGCT
TCAGGAAGACACACCAGTAATCCCATCATGAGCTACCA------------GCAGCAGGGCGCCAGCGCCACGGCCTACCC
T------------CCGCCGGGCCAGCAGCAGCAGCAGGCCTACGTAGCGCCGCCGCCG---GCCGGCTACCCGCAGCGGG
ACCAGCAGTATCCTGACGCCGGCGGCGCCGACACCACCACGAGCCGCGGCGGCCATGGGCACCACCACGGCGGCGGCTTC
TGGAGAGGCTGGTAAGTCTCTGCTAA--------------------------TC----GCATCCTTCCCGTGGATGGCCT
TGTTCATGAATCATGATGATGCTTAACTATGTTTGTCTGCTTCTTGTGTTGTTGCAGCTGCGCGGCGCTGTGCTGCTGCT
GCCTCCTCGACGCCTGCTTCTGATCAAGCCAATTTTATCCGCCGCGCTCAGTTACGATACGTGGTCTGACGAGTGCTCCT
GCTGTTCATCACGGTTCATGTGGAGTCCGGACGTCATGTAC--TAGTTGTTTGTTTTCCTTTTTCGCTTGGTTGGTTACA
CTTTTGTGAGTAATACTATTTGTTGGTTGCGCAGCACCATTTCTGTGTAGTG-----TATCATGGTGATGTTGCTCGATC
TCTTGTACATTGATTATGTCTATATATAAACATGGTTCGTAGTAGTAT-----CACTGTGCAACAATCGCTTCACCTCTT
CAATTCGTATATGATTTGCTCATGGAGTCATAACCCAGCTCGCTACGGAGGG-----------TGGATAC----------
--------------------------------------------------------------------------------
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------------------------------------------------------AATTATTGCGTAACAAATATTTACAC
TCAGAGATGTTGTCTCAAGTCACTACGGAACCGTTTGATTCACCCTTTTGAATGGGTTTGATAAAA--------------
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---------------------------------------
>chr7D_1_TraesCS7D01G357400
TCACGCACTACTCCTTTATTTTCACCAGCGAGTGTAATCCCTAATGGTGAATTGGGCACAGCACCGTGGGGAGGAGCACG
CCACCTCCGCTGCTCCGCTAGTATCCATCTTTCCAGAGACCGCAACACTGCACCTTTGGCGAC-----------------
-------------------------------------------------------------------------TGACGAG
GCCCTTCCTGTTTCATTTGTGTTTAAGATCTTCTTTTTCATCCAATTATCATATCATATTAAGAAATTTCAATTTTCATT
ACCTTAGAAAAAGCTTGTTTTGTCACTTGTTAGGTCTCAAGTCTGGCCATGGTAAACAGATAAATTTTGTCAAGAAGTGA
CAGAAGTAAAAATATCAGAGATAATCCAAGACTCCAATTTGAAAGAGGTTAGTGATCTTTGCAGAAAACTAGTTGGGAAA
AAGGACACTGGTTTTCCTTTAGTATTTCTTTTGATGAAGCTCCTTGATTTTGGACAACAGTTGAGACTTGAGAGAGCATT
TTCTGCAGTGAAATTTAGCAAGTCTGATTTGGGTAATAGAATAGGTGATGGATTCTTGTTTCATCGTCTCACAACCTATG
TTAAAACTTATGTATTTCAGTCCATAGTATCGATGCTATTATGCATACATATCAAAATATTCATGATCAGATCAGAGGGT
TATTATAGTAACTATGTTTGAAATAAAGTATGATCGTTTATGTTCCTACTTGATTTGCCAAAAAACAA-TCGTAAAGCTT
GACATCACAAGGTTTGGGTCCTGGCACCGCCACTGGGTCGACGGATCCCTTAAACTGGAATAAAG--TCCACGCGGCAAT
GGCGCGGCGTCTCTCTCGTGGGTCGGTGGCCGCAGCCTGCAGGTGACGGTTCCA--------TCCTTCCTTCCTCGCTGA
AATTATCTGCGGCGAAGATTCCTCGTCGACGAGGGCCGGCCGGATAGGCTCGCATTGGTCAAATTAAATCGCGAATCCGT
AGCTGGTCAACTGCATCCA------GAGCAGAGGAGATGCCACGCGGGGACGAATCGATGCATGCCACGACGGAGGAGTA
CGTATAGTCCAACACGGTTGAGCCGCCGGCATAATTACACGCGCTGGTCAGCGATTAGCAGAGACGACGTCGTGGCGTCT
TGGATTTCTGCTCTAGGTTCATCT--GCTTGGTGTGGTGCTGGTGCACCAGCCGGGACCTCTCAGTTGGACCAATGGCGG
TCAACCACGCACGAGA--CCCACCGTCCAACGGAACCATGACCACGCCCGAGGCGGCATGCAAGCGCAACACCTGAAAGC
GCGTTGTCCGTGGCACGGTGGCATGGCAGGCAGGGCAGTTCAGCTGTCTTCATACTGGTTTCCTTTCGCTTTCTCTTCTT
CTCCCCCCAG-GTCGACCGACGCGGGTAAGCAACCGTGTGTGTGCAGCTCCTATAAAGGCAGACGCCCGGCAATGCAGTC
TTCATAATCCTACCCATTCCCTTCATCTTCATAGCAGCAAAGCCTCTTTTCCTCATCCTCCCCTACTGTTCTTGATCGCT
TCAGGAAGACACACCAGTAATCCCATCATGAGCTACCA------------GCAGCAGGGCGCCAGCGCCACGGCCTACCC
T------------CCGCCGGGCCAGCAGCAGCAGCAGGCCTACGTAGCGCCGCCGCCG---GCCGGCTACCCGCAGCGGG
ACCAGCAGTATCCTGACGCCGGCGGCGCCGACACCACCACGAGCCGCGGCGGCCATGGGCACCACCACGGCGGCGGCTTC
TGGAGAGGCTGGTAAGTCTCTGCTAA--------------------------TC----GCATCCTTCCCGTGGATGGCCT
TGTTCATGAATCATGATGATGCTTAACTATGTTTGTCTGCTTCTTGTGTTGTTGCAGCTGCGCGGCGCTGTGCTGCTGCT
GCCTCCTCGACGCCTGCTTCTGATCAAGCCAATTTTATCCGCCGCGCTCAGTTACGATACGTGGTCTGACGAGTGCTCCT
GCTGTTCATCACGGTTCATGTGGAGTCCGGACGTCATGTAC--TAGTTGTTTGTTTTCCTTTTTCGCTTGGTTGGTTACA
CTTTTGTGAGTAATACTATTTGTTGGTTGCGCAGCACCATTTCTGTGTAGTG-----TATCATGGTGATGTTGCTCGATC
TCTTGTACATTGATTATGTCTATATATAAACATGGTTCGTAGTAGTAT-----CACTGTGCAACAATCGCTTCACCTCTT
CAATTCGTATATGATTTGCTCATGGAGTCATAACCCAGCTCGCTACGGAGGG-----------TGGATAC----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------AATTATTGCGTAACAAATATTTACAC
TCAGAGATGTTGTCTCAAGTCACTACGGAACCGTTTGATTCACCCTTTTGAATGGGTTTGATAAAAACTAGGGTTGCTTT
TTTTTAATAAGAAGAGGTTTCATATTAGTGATGGCCGAACAACTATGTTCCGAGAGGATACTTGACTTGAGACATGCCCC
TGGCTTTACAGTATCTTTCTTTGTACAATCTTGTCCAGCTCTAGAAAGACTATGCGAGCACTAAATTAGGGCCAAAACCA
TTGAATATCCAGTCCAGGAGAGCTCTGAGGAGAGCTCTGAACACGGATAAGTGGATTGTGTGGGTGT--ATTTAGTTCGA
TGGTTGATACATTTAAACCTCACTAATGTCTCAGACACATTCCGTCAGAAGTTGATCTCGGGTTTTCAGGATCAAATCTA
TGTACATGATTTAATCAACTTTAAACAAGTCTCCCGTTTACAACACACTTACAAAATAAGTACCACCCAAAATTAAAATT
TTCATGTGGATTGTTCATAGGGGAGTTATTCTTACTAAAGACAATATAACGAAATGTAAATGGCATGGCAATAAACAATG
CTGCTTATGTGATCACACGAAAACATCACACCATTTTCTTATTGCATGTCCATTTGTCACTCTATTATGGCGCACGATTC
ATGTTCAAT-----TTACCTCCACCCACCAGTATTACTAATATATTTGGTAACTAGTTGAGGGGGGTTGAAGCCAAAACT
AAAGCAGGGACCCGTATTACAAACAGCATTACTAATGGCAGTATTATAAGGTCGTCACAAACAGTTGTTTTGAAAAAATT
GTGCGTGCCTGCCCTACTAATCGAAGATGATTCCCGTATTACAAACAACATTACTAATGTTAGTATTATAAGGTCGTGGC
AAACAGTTGTTTTGAAAAAAT-TGTGCGTGGTTGCCCTACTAATCGAAGATGATTCCCGCATAGCTACACTTGTAGGATG
GTACAGTCATTGTTGTCATTTTACGTTTGGTCAGTGATGGAACACCCCCCCCC-----CCAACCCATGTGACCACACGGT
TCCAAAATTGTCTGCAATTGGGCGCAAAAACCGTGTGAA
>chr7D_1
TCACGCACTACTCCTTTATTTTCACCAGCGAGTGTAATCCCTAATGGTGAATTGGGCACAACACCGTGGGGAGGAGCACG
CCACCTCCGCTGCTCCGCTAGTATCCATCTTTCCAGAGACCGCAACACTGCACCTTTGGCGAC-----------------
-------------------------------------------------------------------------TGACGAG
GCCCTTCCTGTTTCATTTGTGTTTAAGATCTTCTTTTTCATCCAATTATCATATCATATTAAGAAATTTCAATTTTCATT
ACCTTAGAAAAAGCTTGTTTTGTCACTTGTTAGGTCTCAAGTCTGGCCATGGTAAACAGATAAATTTTGTCAAGAAGTGA
CAGAAGTAAAAATATCAGAGATAATCCAAGACTCCAATTTGAAAGAGGTTAGTGATCTTTGCAGAAAACTAGTTGGGAAA
AAGGACACTGGTTTTCCTTTAGTATTTCTTTTGATGAAGCTCCTTGATTTTGGACAACAGTTGAGACTTGAGAGAGCATT
TTCTGCAGTGAAATTTAGCAAGTCTGATTTGGGTAATAGAATAGGTGATGGATTCTTGTATCATCGTCTCACAACCTATG
TTAAAACTTATGTATTTCAGTCCATAGTATCGATGCTATTATGCATACATATCAAAATATTCATGATCAGATCAGAGGAT
TATTATAGTAACTATGTTTGAAATAAAGTATGATCGTTTATGTTCCTACTTGATTTGCCAAAAAACAA-TCGGAAAGCTT
GACATCACAAGGTTTGGGTCCTGGCACCGCCACTG---------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3D_1
TCACGCACTACTCCTTTATTTTCACCAGCGAGTGTAATCCCTAATGGTGAATTGGGCACAGCACCGTGGGGAGGAGCACG
CCACCTCCGCTGCTCCGCTAGTATCCATCTTTCCAGAGACCGCAACACTGCACCTTTGGCGAC-----------------
-------------------------------------------------------------------------TGACGAG
GCCCTTCCTGTTTCATTTGTGTTTAAGATCTTCTTTTTCATCCAATTATCATATCATATTAAGAAATTTCAATTTTCATT
ACCTTAGAAAAAGCTTGTTTTGTCACTTGTTAGGTCTCAAGTCTGGCCATGGTAAACAGATAAATTTTGTCAAGAAGTGA
CAGAAGTAAAAATATCAGAGATAATCCAAGACTCCAATTTGAAAGAGGTTAGTGATCTTTGCAGAAAACTAGTTGGGAAA
AAGGACACTGGTTTTCCTTTAGTATTTCTTTTGATGAAGCTCCTTGATTTTGGACAACAGTTGAGACTTGAGAGAGCATT
TTCTGCAGTGAAATTTAGCAAGTCTGATTTGGGTAATAGAATAGGTGATGGATTCTTGTTTCATCGTCTCACAACCTATG
TTAAAACTTATGTATTTCAGTCCATAGTATCGATGCTATTATGCATACATATCAAAATATTCATGATCAGATCAGAGGGT
TATTATAGTAACTATGTTTGAAATAAAGTATGATCGTTTATGTTCCTACTTGATTTGCCAAAAAACAA-TCGTAAAGCTT
GACATCACAAGGTTTGGGTCCTGGCACCGCCACTGGGT------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr6D_1
TCACGCACTACTCCTTTATTTTCACCAGCGAGTGTAATCCCTAATGGTGAATTGGGCACAACACCGTGGGGAGGAGCACG
CCACCTCCGCTGCTCCGCTAGTATCCATCTTTCCAGAGACCGCAACACTGCACCTTTGGCGAC-----------------
-------------------------------------------------------------------------TGACGAG
GCCCTTCCTGTTTCATTTGTGTTTAAGATCTTCTTTCTCATCCAATTATCATATCATATTAAGAAATTTCAATTTTCATT
ACCTTAGAAAAAGCTTGTTTTGTCACTTGTTAGGTCTCAAGTCTGGCCATGGTAAACAGATAAATTTTGTCAAGAAGTGA
CAGAAGTAAAAATATCAGAGATAATCCAAGACTCCAATTTGAAAGAGGTTAGTGATCTTTGCAGAAAACTAGTTGGGAAA
AAGGACACTGGTTTTCCTTTAGTATTTCTTTTGATGAAGCTCCTTGATTTTGGACAACAGTTGAGACTTGAGAGAGCATT
TTCTGCAATGAAATTTAGCAAGTCTGATTTGGGTAATAGAATAGGTGATGGATTCTTGTATCATCGTCTCACAACCTATG
TTAAAACTTATGTATTTCAGTCCATAGTATCGATGCTATTATGCATACATATCAAAATATTCATGATTAGATCAGAGGGT
TATTATAGTAACTATGTTTGAAATGAAGTATGATCGTTTATGTTCCTGCTTGATTTGCCAAAAAAGAA-TCGTAAAGCTT
GACATCACAAGGTTTGGGTCCTGGCACCGCCACTG---------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3B_1
TCACGCACTACTCTTTTATTTTCACCAGCCCGTGTAATCCCTAATGGTGAACTGGGCACAACACCGTGGGGAGGAGCACG
CCACCTCCGCTGCTCCGCTAGTATCCATCTTTCCATATACCGTAACACTGCACCTTTGGCGACTGGCGAGCGCACCAAAC
AGTAGTCCACCTCCACTGCTTCGCCGTACTGCAGTCTGCACCTCCGGCGACCGGCGAGTGAGCCAGAAGTCCATGACGAG
GCCCTTCCTGTTTTATTTGTGTGTAAGATCTTCTTTTTCATCCAATTATCATATCATGTTAAGAAATTTCAATTTTCATT
ACCTTAGAAAAAGCTTGTTTTGTCACTTGTTAGGTCTCAAGTCTGGCCATGGTAAACAGATAAATTTTGTCAACAAGTGA
CAGAAGTAAAAATATCAGAGATAATCCAAGACTCCAATTTGAAAGAGGTTAGTGATCTTTGGAGAAAACTAGTTGGGAAA
AAGGACACTGGTTTTCCTTTAGTATTTCTTTTGATGAAGCGCCTTGATTTTGGACATCAGTTCAGACTTGACAGAGCATT
TTCTGCAATGAAATTTAGCAAGTCTGATTTGGGTAATAGAATAGGCAATGAATTCTTGTATCATCGTCTAACAAACTATG
TTAAAACTTATGTGTTTCAGTCCATAGTATGGATGCTATTATGCATACATATCAAAATATTCATGATCAGA---GAGGGT
TATTATCGTAACTATGTTTGAAATAAAGTATGATCGTTTATGTTCCTACATGATTTTGCAAAAAAAAAATCGTAAAGCTT
GACATCACAAGGTTTGGGTCCTGGCACCGCCACTGG--------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr7B_741
ACTGGTTGACGCATC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------CCCTTAAACTAAATGAAGAAATCCACGCGGCAAT
GGCGCGGCGTCTTTCTCGTGGGCCGGTGGCTGCAGCCTGCTGCTGATGGTTCCGTCCTTCCTTCCTTCCTTCCTCGCTGT
GCTTATCTGCGGCGAATCTTCGTGGTCGACGAGGGCCGCCGTGCTAGGCCCGCATTGGTCAAATCAAATCGAGGAATCGC
AGCTGGTCAGCTGCATCCAAGAGCAGAGCAGAGGAT---------ATGGACGAATCGGTGCATGCCACGACGGAGGAGTA
CGTATAGTCCAACACGGTTGAGCCGCCGGCATAATTACACGCGTTGATTAGTGATTAACAGAGACGACGTCGTGGCGTCT
TGGATTTCTGCTCTGGGCTCCTCT--GCTTGGTGTGGTGCTGGTGCACCAGCCGGGACCTCCCAGTTGGACCAATGGCGG
TCAACCACGCACGAGA--CCCACCG-CCAATAGAACCATGACCACGCCCGAGGTGGCATGCAAGCGCAACACCTGAAAGC
GCGTCGTCCGTGGCACGGTGGCATGGCAGGCAGGGCAGTTCAGCTGT-T------------CCCTTCGCTTTC---TCTT
CTCCCCCGAG-GTCGACCGACGCGGCTAAGCAACCGAGTTCATGGCAG--CTATAAAGGCAGACGCTCGGCAAAGCACTC
TTCCTAAAACTACCCACTCCCTTCATCTCCTTTGCAGCAAAGCCTCTTTAACTCGTCCTCCTCTACTGTTCTCGATCGCT
TCAGGAAGACACACCAGTAATCCCATCATGAGCTACCAGCAGGGCTACCCGCAGCAGGGCGCCAGCGCCACGGCCTACCC
T------------C------------AGCAGCAGCAGGCCTACGTAGCGCCGCCGCCG---GCCGGCTACCCGCAGCGGG
ACCAGCAGTATCCTGACGCCGGCGCCGCCGACACCACCACGAGCCGCGGCGGACACGGACACCACCACGGCGGCGGCTTC
TGGAGAGGCTGGTAAGTCTTGTTCGTCCCTTCTGGCTTTCTGAGTTCTGTCTTC----GCATCCGTCCCATCCATGGCCT
CGTTCATCAA-------GATGCTTAATCATGTTTGTCTGCTTCTTCTGTTGTTGCAGCTGCGCCGCGCTGTGCTGCTGCT
GCCTCCTCGACGCCTGCTTCTGATCAAGTCGATTTTATCCGCCGTGCTCAGTTACGACACGTGGTCTGACGAGTGCTGCT
GCTGTTCATCACGGTTGATGTGGAGTCCGGACGTCATGTACAGTAGTTGTTTGTTTTCCTTTTTCGCTTGGTTGGTTACA
CGTTTGTGAGTAGTACTATTTGTTGGTTGCGCAGCACCATTTCTGTGTAGTACTCCATATCATGGTGATGTTGCTCGATC
TCTTGTACATTGATTATGTCTATATATAAACATGGTTCGTAGTATCACTGTGGCACTGTGCAACAATCGCTTCACCTCTC
CAATTTATATATGA-TTGCTGATGGAGCCATAACCCAGCCCCCTTCGGAGG-ACGACGGAGTGTGGACATAGGGCCTGTT
TGGATCGTTTCCTGGGGATGATTTGCCTGGCCTGAAGCACGCCTGGAACCTGCCTGGATGTTGTTTGGATGGTGACCTGA
ACAATCACAGTGTGCCTGGCCTGGTTGTGTCGGGAGATTGATTAGCCTGGTCTGGTTTAAAAAAATAAAAAAGTACTAGG
TCGACAATTTAACTATCTAAATATGTATTATATGTGACAAAAAATATATATTTAGAAACTACATCTGTGTAGAAATCTAG
TGATATACTTTTCATGACATATAACACATATTTAATTCTTCAAATCGATGACCTAAAACTACGCGAATGACTTATACACC
GAGACGGAGGTAGTAAAGAAGATGTTTAGCCCAGGCAGGATCATTAGCCTGTGCCAGGCGTCCCAGTTCTCACGCCTGGC
CGGCAGCCTTGATCTTTAATACCAAGTTACAGAAATCGAGGTGGGACCAGAGCTGAACAATACTTTTTATTAGTGCTACC
AGGCCAGGTCACAATCCAAACACGTACACCAAAAACTAGCCTGGCCAGGCAAGAAAAAACCAACAACTCAGGCCCAAGCC
AGGCACTTGTTTTTCTCAGGCATGATGTTGAGGATACGAACCAAACTAGCCCATAATTATTGCGTAACTAATATTTACAC
TCAGAGATAT------AAGTCACTGTGTAACCGTTTGATTCACCCTTTTAGAAGGGTTTGATGAAAATTAATATTGCATT
GATTTAATAAGAAAAGGTTTCATATTAGTGACGGCGGAATAATTAGGTTCTGGGAGGATACTTGACTTGAGACATGCCCA
TGGCTTTACAGTATCTTTCTTTGTACAATATTGTTCAGCTCTAGAAAGACTATGTGAGCACTATATTACGGTGAAGTCCA
TTGAATATCGAGTTGTTC---------AGGAGTGCTCTGAGCACAGATAAGTGGATTGTGTGGGTACACATTTAGTTCGA
TGGTTGATACATTTAAACCTCACTAATGTATTAGACACATTATGTTAAAAGTTGATCTGGTGTTTTCAGGATCAAATCTG
TGTACATGATTTAGTCAACTTTGAACCAGTCTTCCATTCACAGCACATTTAGAAAATAAGTACCACTCAAAATTAATTTT
TTCGCGTGGTTTGCTCATCGGGGAGTTATTCTTACTAAAGATAATATAACGAAACGTAAATGGCAA-GCAATAAACAATG
ATGCTTATGTGATCACATGGAAACACCACACCATTTGCTTATTGCATGTCCATTTGTCACTATATTATAGGGCACGATTC
ATGTGATGTCCAAATTACCTCCACCCACCAGTATTACTAATATATTTGGTAACTGGTTGAGGGAGGTTGAAGCCAAAACT
AAAGCAGAGACC--------------------------------------------------------------------
-----------------------------------GTATTACAAACAACAATACTAGTGTCAGTATTATGAGGTCGCCGC
AAACAGTTGTTCTGAAAAAAAATGTTCGTGGTTGCCCTGCTAATCGAAGATGATTCCCGCATAGCTACACATGTGGGATG
GTACAGTCATTCCAACCGTTTTAAGTTTGGTCAGTGTTGTAACCCCCTCCCCCCATTGCCAACCCACTTGACCACACGGT
TCCGAAATTGTCTGCAATTGGGCGTAAAAACCGTGTGAA
>chr7A_766
G-------------------------------------------------------------------------------
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------------------------------------------------------------GAAGAAATCCACGCGGCGAT
GGCGCGGCGTCGCTCTCGTGGGCCGGTGGCTGCAG-------GTGACGGTTCCGTCTTTCCTTCCTTCCTTCCTGGCTGT
GCTTATCAGCGGCGAACCTTCGTCGTCGACGAAGGCCGGTGTGCTGGA----------TCAAATCAAATAGCGGATCCGT
AGCGGGTCAACTGCATCCA------GAGCAGAGGAGATGCCACGGATGGACGAATCGGTGCACGCCACGACGGAGGAGTA
CGCATAGTCCAACACGGTTGAGCCGCCGGCATAATTACACGCGCTGATTAATGATTAGCAGAGACGACGCCGTGGCGTCT
TGGATTTCTGCTCTAGGCTCCTCTCTGCTTGGTG------TGGTGCACCAGCCGGGACCTCCCAGTTGGACCAATGGCGG
TCAACCACGCACGAGGCCCCCGCCGTCCAACGGAACCATGAGCACGCCCGAGGCGGCATGCAAGCGCAACACCTGAGAGC
GCGTCGTCCGTGGCACGGTGGCATGGCAGGCAGGGCAGTTCAGCTGTCT------------CCTTTCGCTTTC---TCTT
CTCCCCCCCAAGTCGACCGACGCGGGTAAGCAACCGTGTCTGTGCAGCTCCTACAAATACAGACGCTCGGCGATGCACTC
TTCCTAATCCTATCCATTCCCTTCATCTTCATAGCAGCAAAGCCTCTTTTCTCCATCCTCCTCTAG-GTTCTTGATCGCT
TCAGGAAGACACATCAGTAATTCCATCATGAGCTAC---------------CAGCAGGGCGCCACCGCCACGGCCTACCC
TCCGCCGGGCCAGC------------AGCAGCAGCAGGCCTACGTAGCGCCGCCGCCGCCGGCCGGCTACCCGCAGAAGG
ACCAGCAGTATCCTGCCGCCGCCGGCGCCGACACCACCACGAGCCGCGGCGGCCATGGACACCACCACGGCGGCGGCTTC
TGGAGAGGCTGGTAAGTCTTGTTCGTCCC--------TTCTGAGTCCTGTCTGCGCATGCATCCTTCCCGTGCATGGCCT
TGTTCATGGT-------GATGCTTAATCATGTTTGTCTGCTTCTTCTCTTGTTGCAGCTGCGCCGCTCTGTGCTGCTGCT
GCCTCCTCGACGCCTGCTTCTGATCAAGTCAATTTCATCCATCGTGCTCGGTTAGGCTACGTGGCCTAACGACTGCACCT
GCTGTTCATCACGGTTGATGTGGAGTCCGGATGTCATCT--AGTAATTGTTTGTTTTCCTTTTTCGCTTGGTTGGTTACA
CTTTTGTGAGCAGTGCTATTTGTTGGTTGCTCAGCACCATTTCTGTGTAGTATG-----TCATGGTGATGTGGCCCGATC
TCTTGTACATTGATTATGTTAATATATAAAGATGGTT---AGTAATAT-----CACTGTGCAACAGTCGCTTCACCTCTT
CAATTTATACATGA-TTGCTGATGGAGCCATAACCGAGCTCGCTTCGGTGGGACGATGGAGTGTGGATAC----------
--------------------------------------------------------------------------------
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------------------------------------------------------AGTTATTGTGTAATAAATATTGGCAC
TCAAAGATGTTGTCTCAAGTCACTGCTTAACCGTTTGATTCACCCTTCTGCAAGGGTTTGATAAAAACTAAGGTTGCTTT
TTTCAATAGGGG-AAGGTTACATATTGGTGATGGCCTACCAACTAGGTTC------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>SNPs
--------------------------------------------------------------------------------
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--------------------------------------SSSSSSSS----------SS-SS--SS---------------
----------------------S-------S---------S------------S-------------------------S
SS--------------SS---S------------------SS-S-----S--------------S--------S------
--------------------------------------------SSS----------S----------------------
----------------------------------------------S-S--S----------------------------
-----------------S--S----------------------------------------S------------------
--------------------------------------------------------------------------------
----S--------------------------------------------SSSSSSSSSSSS------------SSS----
---------------------------------------S--------------------------S----------S--
---S---------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------SSSSSSSSSSSS------------------------------------------------------
----------------------------------------------------------S---------------------
-------------------SSSSSSS----------------------------------------------S-------
----------SSSSSSS---------SS-----------------S-----------------S----------------
----------------------------S---------------S-----------------------------------
----------------S---------------------------------------------------------------
------------S--------------------------------------S----------------------------
--------------------------------------------S-----------------------------------
-----SS-------S-----S------S----------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--S----------------------S-S-----------------S---------
-------------S-------------------------------S----S-S--------------------------S
-----------------------------S----S-------------------S--------S----S--SS--SS---
---------S---SSSSSSSSSSSSSS-----S-------S---S--------------------SS-------------
-----------------------------S-S---------SS--S-S----------S-S------------------S
-------------S--------S---S-----S--S--S---S----S---S--------------S---------SS--
---SS----S---S----S----------------------S------------S----------SS-------------
S----------------S-S-----S----------S------------------------S------S-S---------
----SSSS----------------------------------------------S--------S----------------
-------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S-----S---S--------S------SS--
-----------S--------S----S------------S-------------------------------S---S-----
-----------SSSSS-S-----S------------S--S---S---S------------------SS------------
---S--------------------S--------------
>forward_960
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------------------------------------------------------------CATCCTTCCTTCCTCGCTGA
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---------------------------------------
>reverse_1864
--------------------------------------------------------------------------------
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-----------------------TAATCGCATCCTTCCCGTGG-------------------------------------
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---------------------------------------
>forward_1167
--------------------------------------------------------------------------------
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---------------------------GGCATAATTACACGCGCTGG---------------------------------
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---------------------------------------
>reverse_3669
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GGCGCACGATTC
ATGTTCAA------------------------------------------------------------------------
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---------------------------------------
