>input_sequence_55376
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----------------------------------------------------ATGGAAGAAGGTTTTGTGTTCCGGGGGT
GCGAGCTGCCGCCGGGGTTCCGGTTCCAGCCCACGGACCAGGAGATCATCGTGTGCTACCTCAAGAGGAAGGTCGCCTCC
GCCGCCTCCGCCGTCACCTCCATCATCGCCGACGTCGACATCTACAAGTTCGACCCGTGGGAACTGCCCGGTGAGCAT--
--GCATGCATACGTACTGCATACGTAGCCACGCCATGCAGCCAATGCAAAGTTTTGTTTCTATCTCTTTGACTC--TCGT
CCATGCACGAGCTTCCAAGAAAAA--AATACCGTTAGCTGCCGACCAGCTATCTACACGTACCCATTTTTTATGTATCAT
CATCGATCCTGGAACAAGA--------GAGGATTATAGTAACACTGAATGAATATACTGATGAATGGATGGAAGTTTGAC
AAT-----TTTGGGTTGGCGTGCATGCAGACAAGGCGCAGTTCGGCGAGGGGGAGTGGTTCTTCTTCAGCCCGCGGGACC
GCAAGTACCCCAACGGCGCGCGGCCCAACCGCACGGCGGGATCGGGGTACTGGAAGGCCACCGGCACCGACAAGCCGATC
CTGGCTGCCGGCGGCGCGCGCTGCCTCGGGGTCAAGAAGGCGCTCGTCTTCTATCAGGGGCGCTCCCCGCGGGGCACCAA
GACTGAGTGGGTCATGCACGAGTACCGCCTTCTCCACGCCGACGGCGGCGCCGCCACCCGCCACAAGCCCCACGACTCCA
TGAGGGTACGTACCA-----------------------------------------------------------AACCCC
ACACGCGTGCGTCGATGAATCTAGTATTATATACGTACGTACACACAGGTTGTCGGTCAACTTAATTACATTACC-----
--TATGTTGGGTGCAGCTGGACGACTGGGTCCTGTGCCGCGTCCGCAAGAAGGGCGTCGCCGTCGCGCCGGACATGGATG
GTAACCCCGGAGCGCCGAGGCACACGGAGGTTCAGGCAATTGATAGTACCACCGGAGCCGCACACGGCGCCTTCGGCGAC
GACTGGACCGACGGCCAGCTCCTTCAGTACCTGATGAGCGGCGGATCCGGACAGGTCGACGGTGCCGGCACCATCAGCGG
GGCAGCGGGCCACGTCCATGACGGTGCGCGCCGCGAGAGTGCGCCGGAGGTGCAACTGGCGTCGGTGCTGGAGAACATCA
AGAGGGACCTCTCCTTCCATGCCATGGACGACGTGTATTTCCTCCAGCCCAGCAAGCGGGCCAACTGCATGGGAGGAGGC
GCGGGCCACCACACCGACGACGACCAGCTGTCGCCGCCGACGTCCTTGTCCATGTTCGAGGACGATTAG-----------
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---------------------------------------------------
>chr3A_1_TraesCS3A01G162900
AAAGCTGAAATTTATCCCGAAAATTGCCGTCCATGGGACAGCGAGTTTTGGCTCTATGGAGCATATGCTCTCTGAAAAAC
AATAAATTAAAAATAAATAGGAAATAAAATTTAAAATTCTATTTTTTAGATGTTCATGTTAGTGTAACAAGAGTGCTCGC
CAATTTCATGCGAAATGGGATATCAGTGCCTCACTGGAAAACAAAATTAACTGTACCATTTGAGAGCATCAAGGGTCGGA
AGGACCGGCGCTTAATTTTAACTTTACTCCTCTAATACCAATAAGGGATCGGCTTAGGTCCGGTTTAACCCTTCAAAAGT
GAACTTTTACTTCTCTAATCAGTTTCAAGGGATCAGCTAGAGATGCTCTTAAGTCAAAAGAAAAAA---TCCACAGTAAT
TATTTTTCTGTCTTATGCACGTACAGTAGG-TACGAAAGCTGACGAAGAACCGTACGTACGTACGTTTGCTGTAGCGAAG
TGACAGCATTCTTTAAGCCTGAGTAAAACTGTAGTTCCACATCAGTCAGCAGCTGGCTATCGAGCAGCATCGATGCAC--
--GCATAAACACAAAATCTGCCTTCGCACTGACATGTGAACGCTGAAAAGGGCGTAAATCTTGAAGAGGTTTGGCCCATT
CGGGAGTATCAATATGCGGCTGTCAAGCTCACGCGATGTCACGTTACGCGTAATCACCCGGAAGCTTGACGTGCCATCCG
ACGTCAGGGAGGCTAATCCAGCCGTGTGTCCACGATCGATCGGTCTGCGCCACGCGCGTCGCCGTCCAGGACTCGAGAGC
CATCGCCATGCACGTCGCTCTCGCACAATCTCATTGCTTGGCTACCCTGACGACACAGGCACGTACGGTTACTTAGCCTA
AGTAACTTACGCGTGTGCATGTATATATATATATAGGCCATCCGCCAGCCGACTTCTTGGAGCGTTCCCAAATCAGGCCG
TTTCTTCTTCGTCGGCTACA----CGAGCTAGCGCGGATCGATCGATCGGTGATGGAAGAAGGTTTTGTGTTCCGGGGGT
GCGAGCTGCCGCCGGGGTTCCGGTTCCAGCCCACGGACCAGGAGATCATCGTGTGCTACCTCAAGAGGAAGGTCGCCTCC
GCCGCCTCCGCCGTCACCTCCATCATCGCCGACGTCGACATCTACAAGTTCGACCCGTGGGAACTGCCCGGTGAGCAT--
--GCATGCATACGTACTGCATACGTAGCCACGCCATGCAGCCAATGCAAAGTTTTGTTTCTATCTCTTTGACTC--TCGT
CCATGCACGAGCTTCCAAGAAAAA--AATACCGTTAGCTGCCGACCAGCTATCTACACGTACCCATTTTTTATGTATCAT
CATCGATCCTGGAACAAGA--------GAGGATTATAGTAACACTGAATGAATATACTGATGAATGGATGGAAGTTTGAC
AAT-----TTTGGGTTGGCGTGCATGCAGACAAGGCGCAGTTCGGCGAGGGGGAGTGGTTCTTCTTCAGCCCGCGGGACC
GCAAGTACCCCAACGGCGCGCGGCCCAACCGCACGGCGGGATCGGGGTACTGGAAGGCCACCGGCACCGACAAGCCGATC
CTGGCTGCCGGCGGCGCGCGCTGCCTCGGGGTCAAGAAGGCGCTCGTCTTCTATCAGGGGCGCTCCCCGCGGGGCACCAA
GACTGAGTGGGTCATGCACGAGTACCGCCTTCTCCACGCCGACGGCGGCGCCGCCACCCGCCACAAGCCCCACGACTCCA
TGAGGGTACGTACCA-----------------------------------------------------------AACCCC
ACACGCGTGCGTCGATGAATCTAGTATTATATACGTACGTACACACAGGTTGTCGGTCAACTTAATTACATTACC-----
--TATGTTGGGTGCAGCTGGACGACTGGGTCCTGTGCCGCGTCCGCAAGAAGGGCGTCGCCGTCGCGCCGGACATGGATG
GTAACCCCGGAGCGCCGAGGCACACGGAGGTTCAGGCAATTGATAGTACCACCGGAGCCGCACACGGCGCCTTCGGCGAC
GACTGGACCGACGGCCAGCTCCTTCAGTACCTGATGAGCGGCGGATCCGGACAGGTCGACGGTGCCGGCACCATCAGCGG
GGCAGCGGGCCACGTCCATGACGGTGCGCGCCGCGAGAGTGCGCCGGAGGTGCAACTGGCGTCGGTGCTGGAGAACATCA
AGAGGGACCTCTCCTTCCATGCCATGGACGACGTGTATTTCCTCCAGCCCAGCAAGCGGGCCAACTGCATGGGAGGAGGC
GCGGGCCACCACACCGACGACGACCAGCTGTCGCCGCCGACGTCCTTGTCCATGTTCGAGGACGATTAGTTAGGTGTTGC
CTTGCGCACGAGGTATATGCATGCACATGCACGTAATCAACATTCGACAGTGTGCGTACTTAATTCGGTAGCCACGATTG
GGAGTGTTTCTACTCTTGCGGATATCAACTGTGATCGATTTTATTTCCTCCACACTTGCAGAACAACTTCATTTATTCTC
TATCACTGCACT-TTGCTGTGAAACCCTAGCCGCCCCGCCTCTCGGCCTCCTCCACTTCTT-CCCCTCGT---CGCCGCC
GTCCGCACCACCGCCGGGTGAAGCCTGGCTGGCAGGGCGGCGACGGGGCTTCTCCTCA-CCTCTTCCGTCACGGCTGGCG
CGGGACAACGAGATCGGGAGGTGCGCCGAGCGAGCGCGGA-TCCGGCGGCATGGCGGGC------CCCTGCGGCGTCCTA
CGCGGC---GTGGTGGCGGTGGCCTGCTTGTGGCGAAGTGGTGGCTGCGTTGGATTTGTCTGGTGGTCGTGGGTGCTGCC
AGATCCAGATCAGATCCATCTGGATCCCGTCTTTGAAATCCGTCGGCCGCCGTGGGGTGGTGGTGGTCGTCGCTGGCCAC
GTCGGATCCTTGGATTCTGCGTCTGGAGTTCTATGTTCGGTTCTTCTCGGTCCTCCTTCCTGGTGGGCTGAGCCCCATGG
CTCTTTCATCTCTGCAGGTCTCGGTTCATGGTTA--TTGCCGGATCTGGATCACACGGAGGTTTGGTGGTATAGGAT-GG
GACCATAGGAAACTTTGGTTGGCTTGTTCGG-CCC-GGCATCGGCGACGTCACTCCACGCCGTTATCCTCCCTAGAGGCG
AAGCCGTGGTCCGTCCTATCCAACCCCGAATCCCTCCCGGACGAAAGTCAAAAATCCAGTCCGGATTGGGCGGC-GCGGC
GGCCTGCGCCTTGTATTCTCCATGGAGGCGTCATCTGGGGAGGACCTCTTATTCGGGGGAGAGATGCCACGGGTGGTGGG
GCTCCGTGTGGCTCCAGCAGTGATGATGGTGTGGTGGTGGCTAGGTGGTGC
>chr3D_306
TAACAC--------------------------------------------------------------------------
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----------------------------------------------------------------------CTTCAAATGT
GGACTTTTACTTCTCTAACCAGTTTCAAGTTATCAGCTAGAGATGCTCTTAAGTCAAAAAAACAAAGATTCGGCAGTAAT
TA--TTTCTGTCTTATGTACGTACAGTA-G-TACGAAAGCTGACGAAGAACCGTACGTACGT----TTGCTGTAGCGAAG
TGACAGTATTATTTAAGCCTGAGTAAAACTGTAGTTCCACATCAATCACCAGCTGGCTATGGAGCAGC----ATGCAC--
--GCATAAACACAAAATCTGCCTTCGCACTGACATGTGAACGCTGAAAAGGGCGTAAATCATGAAGAGGTTTGGCCCATT
TGGTAGTATTAATATGCGGCTGTCAAGCTCACGCGATGTCACGTTACGCGTAATCATCGGGTAGCTTGACGTGCCATCGG
ACGTCAGGGAGGCTAATCCAGCCGTGTGTCCACGATCGATCGGTCTGCGCCACGCGCGTCGCCGTCCAGGACTCGAGAGC
CATCGCCATGCACGTCGCTCTCGCATAATCTCATTGCTTGGGTACCCTGACGACATGGGCACGTACGGTTACTTAGCCTA
AGTAACTTACGCGTGTGCATG------TATATATAGGCCATCCGCCAGCCGACTTCTTGGAGCGTTCCCAAATCAGGCCA
TCTCTTCTTCGTCGGCTCCGGCTCCGAGCTAGTGCG----GATCGATCGGTGATGGAAGAAGGGTTTGTGTTTCGGGGGT
GCGAGCTGCCGCCGGGGTTCCGGTTCCAGCCCACGGACCAGGAGATCATCGTCTGCTACCTCAAGAGGAAGGTCGCCTCC
GCCGCCTCCGCCGTCACCTCCATCATCGCCGACGTCGACATCTACAAGTTCGACCCGTGGGAACTGCCCGGTAAGCATGC
ACGCATGCATACGTACTGCATACGTAGCCACGCCATGCAACCAATGCAAAGTTTTGTTTCTATCTCTTTGACTC--TCGT
CCATGCACGAGCTTCCAAGAAAAA--AATACCGTTAGCTGCCGACCGGCTATCTACAC----CCATTTTTAATGTATATA
TCATCGTGA-GGAACAAGA--------GACAAGGATTATAATGCTGATTGAATATACTGGTAAATGGATGGAAGTTTGAC
ATT-----TTTGT----GCGTGCGTGCAGACAAGGCGCAGTTCGGGGAGGGGGAGTGGTTCTTCTTCAGCCCGAGGGACC
GCAAGTACCCCAACGGCGCGCGGCCCAACCGCACGGCGGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGCCGATC
CTGGCCGCCGGCGGCGCGCGCTGCCTCGGGGTCAAGAAGGCGCTAGTCTTCTACCAGGGCCGCTCCCCGCGGGGCACCAA
GACTGAGTGGGTCATGCACGAGTACCGCCTCCTCCACGCCGACGCCGGCGCCGCCACCCGCCACAAGCCCCACGACTCCA
TGAGGGTACGTACTATTTCCGTAAAAAAAAATACAAGAGCGTTTATATATCACTAAAGTTAGCAAGGGAGTACCAAACAA
ACACGCGTGTATTGATGAATCTACGGTACGGACACA------------GTTGCCGGTCAACTGAATTTCATACTTACATA
TATACGTTGGGTGCAGCTGGACGACTGGGTCCTGTGCCGCGTCCGCAAGAAGGGCGTCGCCGTCGCGCCGGACATGGATG
GCAACCCCGGAGCGCCGAGCCACGCGGAGGTTCAGGCAATTGATAGTACCACCGCAGCGGCACACGGCGCCTTCGGCGAC
GACTGGACCGACGGCCAGCTCCTGCAGTACCTGATGAGCGGCGGATCCGGACAGGTCGACGGTGCCGGCACCATCAGCGG
GGCGGCGGGTCACGTCCATGACGGTGCGCGCCGCGAGAGTGCGCCGGAGGTACAACTGGCGTCGGTGCTGGAGAACATCA
AGAGGGACCTCTCCTTCCATGCCATGGACGACGTGTATTTCCTCCAGTCCAGCAAGCGGGCCAACTGCATGGGAGGAGGC
GCGGGCCACCACACCGACGGCGACCAGCTGTCGCCGCCGAAGTCCCTGTCCATGTTCGAGGACGATTAGTTAGGTGTTGC
CTTGCGCACGAGGGATATGCATGCACA----CGTAATCTACAGTCGACAGTGTGCGTGCTTAATTCGGTAGCCACGATTG
GGAGTGTTTCTACTCTTGCGGATATCAACTGTGATCGATTTTATTTCCTCCACACTTGCAGAACAACTTAATTTATTCTC
TATCAGTGCAGCCTTGCTGTGAA---------------------------------------------------------
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---------------------------------------------------
>chr3B_310
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---------------------------------------------------------------------CCTTCAAATGC
GAATTTTTACTTCTCTAACTAGTTTCAAGGTATCAGCTAGAGATGCTCCTAAGTCAAAAAATAAAAAATTCCGCAGTAAT
TA--TTTCTGTCTTATGTACGTACAGTA-GGTACGAAAGCTGACGAAGAACCGTACGTAGGT----TTGCTGTAGCGAAG
TGACAGTATTGTTTAAGCCTGAGTAAAACTGTAGTTCCACATCAGTCACCAGCTGGCTATCGAGCAGC----ATCGATGC
GTGCATAAACACAAAATCTGCCTTCGCACTGACATGTGAACGCTGAAAAGGGCGTAAATCATGAAGAGGTTTGGCCCATT
TGGGAGTATTAATACGCGGCTGTCAAGCTCACGCGATGTCACGTTACGCGTAATCATCCGGTAGCTTGACGTGCCATCGG
ACGTCAGGGAGGCTAATCCAGCCGTGCGTCCACGATCGATCGGTCTGCGCCACGCGCGTCGCCGTCCAGGACTCGAGAGC
CATCGCCATGCACGTCGCTCTCGCATAATCTCATTGCTTGGCTACCCTGACGACATGGGCACGTACGGTTACTTAGCCTA
AGTAACTTACGCGTGTGCATG------TATATATAGGCCATCCGCCAGCCGACTTCTTGGAGCGTTCCCAAATCAGGCCA
TCTCTTCTTCGTCGGCTCCGACTCCGAGCTAGTGCC-------------GTGATGGAAGAAGGTTTTGTGTTCCGGGGGT
GCGAGCTGCCGCCGGGGTTCCGGTTCCAGCCGACGGACCAGGAGATCATCGTCTGCTACCTCAAGAGGAAGGTCGCCTCC
GCCGCCTCCGCCGTCACCTCCATCATCGCCGACGTCGACATCTACAAGTTCGACCCGTGGGAACTGCCCGGTAAGAATGC
ATGCATGCATACGTACGGCATACGTAGCCACGCCATGCAACCAGTGCAAAGTTTTGTTTCTATCTCTTTGACTCTTTCGT
CCATGCACGAGCTTCCAAGAAAAATAAATACCGTTAGCTGCCGACCAGCTATCGACAC----CCATTTTTAATGTACATA
TCATCGTTC-GGAACAAGACTGCAAGAGAGAAGTATTGTAATGC----TGAATATACTGAGAAGTGGACGGAAGTTTGAC
AATTTTAATTTGT----GCGTGCATGCAGACAAGGCGCAGTTCGGGGAGGGGGAGTGGTTCTTCTTCAGCCCGAGGGACC
GCAAGTACCCCAACGGCGCGCGGCCCAACCGCACGGCGGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGCCGATC
CTGGCTGCCGGCGGCGCGCGCTGCCTCGGGGTCAAGAAGGCGCTCGTCTTCTACCAGGGCCGCTCCCCGCGGGGCACCAA
GACTGAGTGGGTCATGCACGAGTACCGCCTCCTCCACGCCGACGCCGGCGCCGCCACCCGTCACAAGCCCCACGACTCCA
TGAGGGTGCGTACCA-----------------------------------------------------------AACC--
ATACGCGTAACTCGATGAATCTACGCACACACAGCT-----------GGTTGTCGGTCAACTTAATTACATACTCTATTT
CTTATGTTGGGTACAGCTGGACGACTGGGTCCTGTGCCGCGTCCGCAAGAAGGGCGTCGCCGTCGCGCCGGACATGGATG
GCAACCCCGGAGCGCCGAGCCACGCGGAGGTTCAGGCAATTGATAGTACCACCGCAGCCGCGCACGGCGCCTTCGGCGAC
GACTGGACCGACGGCCAGCTCCTGCAGTACCTGATGAGCGGCGGATCCGGACAGGTCGACGGTGCCGGCGCCATCAGCGT
GGCGGCGGGCCACGTCCATGACGGTGCGCGACGCGAGAGTGCGCCGGAGGTACATCTGGCGTCAGTGCTGGAGAACATCA
AGAGGGACCTCTCGTTCCATGCCATGGACGACGTGTATTTCCTCCAGCCCAGCAAGCGGGCCAACTGCATGGGAGGAGGT
GCGGGCCACCACACCGACGGCGACCAGCTGTCGCCGCCGACGTCCTTGTCCATGTTCGAGGACGATTAGTTAGGTGTTGC
CTTGCGCACGAGGTATATGCATGCAC------------------------------------------------------
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>chr3D_2481
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--------------------GAAACCCTAGCCGCCCCGCCTCTCGGCCTCCTCTGCTTCTC-CCCATCCT---CGCCGCC
GTCCGCAGTGTCGTCGGGCGAAGCCTGGCCGGCAGGGCGGCGGCGGGGCTTCTCCTCA-CCTCTTCCGTCACGGCTAGCG
TGGGACAACGAGATCGGGAGGTGCGCCGGGCGAGCGCGGGGTTCGGCGGCGCGGCGGGCGGGTCTCCCGATGGCGTCCTA
CGTGGC---GCGGTGGCGGCGGCCTTCTTGTGGCGAAGTGGTGGCTGTGTTGGATTTGACCGGTGGTCGCGAGTGCCGCC
GGATCCAGATCAGAACCATCTGGATCCTGTCTTTGGAATCTGTCGGCCGCCGCGGGGTGGTGGTGGTCGTCACTGGCCAC
GTCAGATCGCTGGATTCGGCGTCTGGAGTTCTACGTTGGTTTCTTCTCAGTCCTCCTTCCTGGTGGGCTGAGCCCCATGG
CTCTTTCATCTCTGCAGGTTTCGGCTCATGGCTA--TTGCTGGATCCGGAGCAGACGGAGGTTTGGTGGTATAGGAT-GG
GACCGGAGGAAACTTTGGTCGGCTTGTTCGG-CCC-AGCATCGGCGACGTCACTCCACGCCGTTATCCTCCCTGGAGGCG
AAGCCGAGGTCTGTCCTATCCACCCCCGAATCCCTCCCGGACGAAAGTCCAAAATCCAGTCTGGATTGGGCGGCGGCGAC
GTCCTGCGCGTCGTATTCTCCATGGAGGCGCCGTCTGGGGAGGACCTCGTATTCAGGGGAGAGATGCTGCGGGTGGTGGG
GCTCTGCGTGGCTCCAGCAGTGGCAACGGTGTGGTGGTTGCCAGGTGGTGC
>chr4D_2481
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--------------------GAAACCCTAGCCGCCCCGCCTCTCGGCCTCCTCTGCTTCTC-CCCCTCCT---CACCGCC
GTCCGCAGCGCCTTCGGGCGAAGCCTGGCCGGCAGGGCGACGGCGGGGCTTCTCCTCA-CCTCTTCCGTCACGGCTGGCG
CGGGACAACGAGATCGGTAGGTGCGCCGGGCGAGCGCGGGGTTCGGCGGTGCGGCGGGAGGGTCTCCCGGCGGCATCCTG
CGCGGC---GCGGTGGCAGCGGCCTGCTTGTGGCGAAGTGGTGGCTGCGTTGGATTTGACAGGTGGTCGCGGGTGTCGCC
GGATCCATATCAGATCCATCTGGACCCTGTCTTTGGAATCCGTCGGCCGCCGCGAGGTGGTAGTGGTCGTCGCTGGCCAC
GTCGGATCGCTGGATTGGGCGTCTGGAGTTTTACGAAGGGTTCTTCTCGGTCCTCCTTCCCGGTGGGCTGAGCCCCATGG
CTCTTTCATCTCTGCAGGTTTCGGTTCATGGCTA--TTGCCGGATCCGAAGCAGACGGAGGTTTGGTGGTATAGGAT-GG
GACCGGAGAAAACTTTGGTCGGCTTGTTCGG-CTT-GGCATCGGCGACGTCACTCCACGGCGTTATCCTCCCTGGAGGCG
AAGCCGAGGTCTGTCCTATCCACCCCCGAATCCCTCCCGGACGAAAGTCCAAAATCCATTCTGGATAGGGCGGCGGCGGC
GTCCTGCGCGTCGTATTCTCCATGGGGGCGCCGTCTGGGGAGGACCTCGTATTCGGGGGAGAGATGCTGCGGGTGGTGGG
GCTCCGTGTGGCTCCAGCAGTGGCGACGGTGTGGTGGTTGCCAGGTGGTGC
>chr7B_2481
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--------------------GAAACCCTAGCCGCCCCGCCTCTCGGCCTCC-CCGCTTCTC-CCCCTCCT---CATCGCT
GTCCGCAGCGCCGCCGGGCAAAGCCTGGCCGGCAGGGCGGCGGTGGGGCTTCTCCTCA-CCTCTTTCATCATGGATCGTG
CGGGACAATGAGATCGGGAGGTGCGCCCGGCGAGCGCGGGGTCCGGCGACGCAACGGGCGGGTCTCCAGGCGGCGTCTTG
CCTGGC---GCGGTGGCGGCGGCCTGCTTGTGGCGAAGTGGTGGCTGCATTGGATTTGACCGGTGGTCGCGGGTGCCGCC
GGATCTAGATCAGATCCATCTGAATCCTGTCTTTGAAATCCGTTGGCCGCCGCGGGGTGGTGGTGGTCGTAGCTGGCCAC
GTCGGATCGCTGGATTCGGCGTCTGGAGTTCTACGTTGGGTTCTTCTCGGTCCTCCTTCCTGGTGGGCTGAGCCCCATGG
CTCTTTCATCTCTGCATGTTTCGGTTCATGGCTA--TTGACGGACCCGGAGCAGATGGAGGTTTGGTGGTATAGGAT-GG
GACCGAAGGAAACTTTGGTCGGCTTATTCGA-CCC-GACATTGGCAATGTCACTCCACGTTGTTATCCTCCCTGGAGGCG
AAGCCGAGGTCTGTCCTATCCACCCCCGAATCCCTCCCAGACGAAAGTGTAAAATCTAGTCTAGATTGGGCGGCGGCGGC
GGCCTGCGCGTCGGATTCTCCATGGAGGCGCCGTCTAGGGAGGACCTCGTATTCGGGGGAGAGATGTTGCGGGTGGTGGG
GCTCCGTGTGGCTCCAGCAATGGCGACGGTGTGGTGGTTGCTAGGTGGTGC
>chr1B_2481
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--------------------GAATCCCTAGTCGCCCCGCCTCTCGGCCTCCTCCGCTTCTC-CCCCTCCT---CGCTGCT
GTCTGCAGCGCCGCCGGGTGAATCCTGGCCGGCAGGGCGGCGGCAGGGCTTCTCCTCA-CCTCTTCCGTCATGGCTGGCG
CGGGACAACGAGATCAGGAGGTACGTTGGGCGAGCATGAGGTCCGGCGACACGGCGGGCGGGTCTCCTGGCGGCGTCCTG
CGCGAC---GTGGTGGTTGCAGCCTGCTTGTGGCGAAGTGGTGGCTGCGTTGGATTTGATTAGTGGTCGCGGGTGCCGCC
GGATCCAGATTAGATCCATTTGGATTCTAACTTTGGACTCCGTCGGTCGCCACAGGGTGGTGGTCGTCGTCGCTGGCCAC
GTCGGATCGTTGGATTCGGCATCTAGAGTTCTAGGTTGGGTTCTTCTCGGTCCTCCTTCCTGGTGGGCTGAGCCCCATGG
CTCTTTCATCT--GCAAGTTTCGGTCCATGGCTA--TTGCCGGATCCGGAGTAGACAGAGGTTTGGTGGTATAGGAT-GG
GACCGGAGGAAGCTTTGGTCGTCTTGTTCTG-CCC-GGCATCGGCGACGTCGCTCCACTCCGTTATCCTCCCTAGAGGCG
AAGCCGATGTCTGTCTTATCCACCCCCAAATCCCTCCCGGACGAAAGTACAAAATCCAATCTGGATTGGGCGGCGGCGGC
GTCATGCGCATTGTATTCTCCATGGAGGCGCCGCCTGGGGAGGGCCTCGTATTCGGGGGAGAGAAGCTACGGGTGGTGGG
GCTCCGCGTGGCTCCAGCAGTGGCGACTATGTGGTGGTTGCCAGGTGGT--
>chr2D_2482
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---------------------AAACCCTAGCCG-CCCCTCTCTCGGCCTCCTCCGCTTCTC-TCCCTCCT---CGCCGCC
GTCCGCAGCGTCGCCGGGCGAAGCCTGGCTGGCAGGGCGGCCGCGGGGCTTCTCCTCA-CCCCTTCCATCTCGGCTGGCG
CGGGACAACGAGACCAGGAGGTGCGTCGGGCGAGCGTGGGGTCCGGCGGCACGGTGGGCGGGTCTTCTGGCAGCGTCGTG
CGCGGCACGGCGGCGGCGGTGGCCTGCTTGTGGTGAGGTGGTTGCTGTGTTGGATATGACGGGTGGTCGCGCGTGCCGCC
GGATCCAGATCAGATCCATCTGGATCATGTCCTTGGACTTCGTCGGCCGCCGTGGGGTGGTGGTGGTCGTCGCTTGCGAC
GTCGGATCGCTGGATTCGGCGTCAGGAGTTCTACGTTGGGTTCATCTCGGTCCTCCTTCCTGGTGGGTTGAGCCTCATGG
CTCTTTCAATTCTGCAGGTTTCGGTTCATGGCTAA-TTGCCGGATCCGAAGCAGATGGAGGTTTGTTGGTATA-GAT-GG
GACCGGAGGAAACTTTGGTCGACTTGTTCGG-CGC-GGCATCGGCGACGTCACTCGACGCTGTTATCCTCCCTGGAGGCA
AAGCCGAGGTCTGTCCTATCCACCCCCGGATCCCTCCTGGACGAAAGTCTAAAATCCAGTCTGGATCGGGCGGCGACGGC
GTCCTGTGCGTCGTATCCTCCATGGACGCGCCGTCTAGGGAGGACCTCGTGTTCGGGGGAGAGATGCCGCGGGTGGTGGG
-CTTCGCGTGGCTCCAGCAGTGGCGACGGTGTGGTGGTTGCCAGGTGGTGC
>chr1D_2482
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---------------------AAACCCTAGCCGCCCCCCCTCTCGGCCCCCTCCGCTTCCC-CCCCTCCTCGCCGCCGCC
GTCCGCAGCGTCGCCGGGCGAAGCCTGGCCAGCAGGGCGGCGGCGGCGCTTCTCCTCA-CCCCT-CCATCTCGGCTTGCA
CCGGACAACGAGACCGGGATGTGCGCCGGGCGAGCGTGGGGTTCGGCGGCGCGGCGGGCGGGTCTTCCGGCGGCGTCGTG
CGCGGT---GCGGCGGTGGCGGCCTGCTTGTGGCGAGGTGGTGGCTGCGTTGGATATGACCGGTGGTCGCAGGTGCCGCC
GGATCCAGATCAGATCCATCTGGATCCTTTCCTTGGACTTCGTCGGCCGCCGCGGGGTGGCGGTGGTCGTTGCTTGCGAC
GACGGATCGCTGGATTCGGCGTCTGGAGTTCTACGTTGGGTTCTTCCCGGTCCTCCTTCCTGGTGGGCTGAGCCCCATGG
CTCTTTCAATTCTGCAGGTTTCGGTTCATGGC-CAGTTGCCAGATCCGGAGCAGACGGAGGT----TGGTATAGGAT-GG
GACCGGAGGAAACTTTGGTCGACTTGTTCGG-C-CCGGCCTCGGCGACGTCACTCGATGTCGTTATCCTCCCTAGAGGCG
AAGCAGAGGTCTGTCCTCTCCACCCCCGGATCCCTCCCGGACGAAAGTCCAAAATCCAGTTTGGATTGGGCGGCGGCGGC
AGCCTGCACGTCGTATCCTCCATGGAGGCGCCATCTGGGGAGTACCACGTGTTCGGGGTAGAGATGCTGCAGGTGGTGGG
-CTCCGTGTGGCTCCAGCAGTGGCGACGGTGTGGTGGTTGCCAGGTGCTGC
>chr1D_2482
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---------------------AAACCCTAGCCGCCGCCCCTCGA-GTCTCCTCCTCCTCTC-CCCCTCCT---CGCCGCC
GTCCATAGCGCCGCCGGGCGAAGCCTGGCCGGCTGGGCGGCGGCGGGGCTTCTCCCCATCCTCC-CCGTCTTGGCTGGCG
CGGGACAGCGAGATCCAGAGGAACGCCGGGCGAACGTGGGGTCCGGCGGCGCGGCGGGCGGGTCTCCCATCGGCATCGTG
CGCGGC---GCGGCGGTGGCGACCTGCGTGTCGTGAGGTGGTGGCTGCGTTGGCC-TGACTGGTGGTCGCGGGTGCCGCC
AAATCCAAATCGGATCCATCTGGATCCTTTCTTCGGACTCCGTCGGCCGCCGCGGGGTGGTGATGATCGTCGCTGGCCAC
GTCGGATCGTTGGATTCGGCGTCTGGAGATCTACAAGGAGTTCTTCTCGATCCTCCTTTCTGGTGGGTTGAGCCCCATGG
CTCTTTCATCTTCGCGGGTTTCGGATCATGGC----TTGCCGGATCCGGAGTACACGGAGGTTTGGTGGCATAGGATGGG
GACCGGAGGAAACTTTGGTCGGCGTGTTCGG-C-CCGGCATCGGCGACGTCACTTGACGCCGTTACCCTTCCTGGAGGCG
AAGCCGAGGTCCCCCCTATCCACCCCCGAACCCCTCCCGGACGAAAGTCCAAAATTCAGTCTGGATTGGGCGGCGGCGGC
GTCCAGCGCGTCGTATCCTCCATGGAGGCGCCGTCTTGGGAGGAACTGCTGTTCGGGGGAGAGATGTTGTGGATGGTG-G
GCTCCGAGTAGCTCCAGCAGTGGCGATGGTGTGGAGGTTGCCAGGTGGTGC
>chr6B_2483
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----------------------AACCCTAGCCGCCCTACCTCTTGGCCTCCTCCGCTTCCCCCCCCTCCT---CGCTGTC
GTCCGCAGCGCCGCCGGGCGAAGCCTGGCCGGCAGGGCGGCGGCTGGGCTTCTCCTCA-CCTCTTCCGTCACGGCTGGCG
CGGGGCAACGAGATCGGGAGGTGCATCGGGCGAGCGCCGGGTCCAGCGGCGCGGCGGGCGGGTCTCCAGGCGATG-CCTG
CACGGC---GCGGTGACGACGGCATGCTTGTGGTGAAGTGGTGGCTGCGTTGGATTTGACCGGTGGTCGCAGGTGCCGCC
GGATCCATATCAGATCCATCTAGATTCTGTCTTTGGAATCGGTCGGCCGCCGCGAGGTGGTGGTGGTCGTCGTTGACCAC
GTCGGATCGCTGGATTCGGCGTCTGGAGTTCTACATTGGGTTCTTCTCTGTCCTCCTTCCTGGTGGGCTGAACCCCATGG
CTCTTTCATCTCTGCAGGTTTTGGTTCATGGC-AA-TTGCCGGATCCGGAGCAGACGGAGGTTTGGTGGTATAGGAT-GG
GACCGGAGAAAACTTTGGTCGGCTTGTTCGACC-C-GGCATCGACGACATCACTCCATGTTGTTATCCTCCTTAGAGGCG
AAGCCGAGGTCTGTCCTATCCACTCCCGAATCCCTCCAGGACGAAAGTCCAAAATCCAGTGTGGATTGGGCGGTGGCGGC
GTCCTGCACGTCGTATTCTCCATGGAGGCGCCGTCTGGGGAGGACCTCGTATTCAGAGGCGGGATGCTGCGGGTGGTGGG
GCTCCGCGTAGCTCTAGCAGTGCCGACGGTGTGGTGGTTACCAGGTGGTGC
>chr4B_2489
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----------------------------AGCCGCCCCGCCTCTCTGCCTCGTCCGCTTCTT-CCCCTCCT---CGCTGTC
GTCCGCAGCGCCGTTGAGCGAAGCCTGGCCGGCAGGGCGGTGGCGGGGCTTCTCCTCA-CCTCTTCCGTCACGGCTGGCG
CGGGACAACGAGATCGGGAGGTGCGCCGGGTGAGCACGGGGTCAGGCGGCATGGCAGGCGGATCTCCCGGCGGCGTCCTA
CGCGAC---GCGGTAGTGGCAGCCTGCTTGTGGCGAGGTGGTGGCTGCGTTGGATTTGACCGGTGGTCGCGGGTGCCGCC
GGATCTAGATCAGATCCATCTGGATCCTGTCTTTGGAATCCGTCGACCGCTGC-GGGTGGTGGTGGTCGTCGTTGGCCAC
GTTGGATCGCTGGATTCGGCGTCTGGAGTTCTACGTTGGGTTCTTCTTGGTCCTCCTTCCTGGTGGGCTGAGCCCCATGG
CTCTTTCATCTCTGTAGGTTTTGGTCCATGGC-CA-TTGCCGAATCCGGATCACACGGAGGTTTGGTGGTATAGGAT-GG
GACCAGAGGAAACTTTGGTCGGCTTGTTTGG-C-C-GGCATCGGCGACGTCACTCCACGCCGTTATCCTCCCTAGAGGCG
AAGCCGAGGTCCGTCCTATCCACCCCTGAATCCCTCCCGAACAAAAGTCCAAAATCCAGTCTGGATTGGGTG--GGCGGC
GTCCTGCGCG-TGTATTCTCCATGGAGGCGCTGTCTGGGGAGGACCTCGTATTCAAGGGAGAGATGTCGTGGGTGGTGGG
GCTCCACGTGGCTCCAACAGTGGCGATGGCGTGGTGGTGGCCAGGTGGTGC
>SNPs
S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--
------------------S-----------S----------------------------S------------S-------
--SS-------------S----------S---------------------------------SSSS--------------
------S---S-------------------------------------S-------------------SSSS--------
------------------------------------------------------------S-------------------
S--------S----------------------------------------------S----S----------------S-
--------------------------------------------------------------------------------
-------------------------S-----------------------------SS-----------------------
---------------------SSSSSS----------------------------------------------------S
-S---------------S-S------------S---SSSS----------------------------------------
----------------------------------------------------S---------------------------
------------------------------------------------------------------------S-------
---------------------------------------S----------------------------------------
----------------------------------------------------------SSSS--------S------SSS
SSSSSS-S-S--------------------S-S---S----SS----S-------------S------------------
------------SSSSS----------------------------S---------------------------S------
----------------------------------------S---------------------------------------
-----------------------------------------------------S-----S--------------------
------------------------------S-------------S-----------------------------------
------------------------------------------------------------------------------SS
---------SS------------SSS-S-S-S-SS-SSSSSSSSSSS------------------------SSS------
--------------------------------------------------------------------------------
-S-----------------S---S------------------------------S-------------------------
-----------------------S--------------------------------------------------------
---S-----------------------------------------------S----------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
---------------------------SSSS-------S---S--------------S----------------------
---------------------------------------------------------------------S----------
-----S----SS------------------------------------------S-------------S-----------
-------S-S--------------------------------S-------------------------------------
----------------------------S----------S----------------------------S-----------
----------------------------------------------------------S----------S------S---
---------------------------S----------------------------------------------------
--------S--------S---------------S---S------------------------------------------
-------------------S-----------S--------------S---------------------------------
-----S-------------S------------------------------------------------------------
------S---------------S--------------------------S-----------S------------------
---------S--------------------S-----------------S-------------------------------
----------------------SS---------------------------
>forward_171
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-----------------------------------------------------------------------AGTGCTCGC
CAATTTCATGC---------------------------------------------------------------------
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---------------------------------------------------
>reverse_1877
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------------------------------------ACGTACACACAGGTTGTCGG------------------------
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---------------------------------------------------
>forward_1093
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---------------------------------CGGACCAGGAGATCATCGTG---------------------------
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---------------------------------------------------
>reverse_3087
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----------------------------------------------TGGATCACACGGAGGTTTGG--------------
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---------------------------------------------------
