>input_sequence_55348
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-------------------------------------------------------ATGGAGCTTGAGCTTAGTCTAGGCG
ATCTTCCAGCTCCAGTGAAGGCCAACAACACCATGCCCGCGCCGGCAACATGCCAAGGAGAAGACCACGACGACCTTGCG
CTAGGGCTACGAGTAATGGCTACCGAAAGAGCTGACCAAGATAACCAGAGGACAAGCATAGAAACTGCGGAGGGAGAAGA
---TAGTGACGAAGCATGCCGGGAACTGCCTGTCAGAGCAAGCCCTCTTCGCCAAGCCTCTGCACAAACAGGTAACTTGA
AGACAGTCCTGCAGAACAAGCTGTTGAA-TTGA------TCGGTTCCCATCCCAATAGGTCCATCCATATGTTGCTATGT
GCTCGTAGCTTC--TGTCTGTAAAATTCTTTGTATGCTGATGAGTCTTTTT-TCTGTACAGCGGGTGCGAATTCACGGGG
GTTTGATGTGAACGCTCCTGTTCCGGTGGATGACAGAGCGTTGATAGCGAGGTCCTTGTCACCGCCGTCCATGCATATGG
AGGTTCCTGTGGCACAGGGAGTTGACGAGGAAGCTTCAGAGGAAGAAGACAATAGAGGTGGAAGGGTGAGGAAGAAACTG
AGGCTGTCCAAGGAACAATCTGCGTTTCTAGAGGGTAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCACCTTCTG
CCTGCATATTTTCCTAATCCATCAAATGGAAACTTGCTTGCCTTGCCCTATCTTGTTCTAGTGCACCTAAAATAAGTATA
GATGATATAGATGG----ATTCATTCGGCATATATACAGGAGCAAAAGAGCCGTTTAGCCAACCAGCTGAGCCTTCGACC
ACGCCAGGTTGAGGTCTGGTTCCAAAACAGAAGAGCCAGGTATGTAACAAAATTTATACACCAGTAGTTTTCCC------
--TTTTGATGTCACCATTTTCCAAAACAGAAGAGCCAGGTAACAAATCTAACATCATGTCGTTCACAGGACGAAGCTGAA
GCAGACGGAGGCGGACTGCGAGCAACTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAGCGGGAGG
TGGCGGAGCTGCGCGCCTCCCGTGCCCCGTACCCGCTCTACAATCTGAATCACCACCTGTCTGGGTTCAGCACGGCGCTC
CCAGCGTGCTCATCATGTGACGCCACCACCCGTTCCACCGTCTCTTCCGTGTCGTCATCTCCGGGACCGTCGCCGATGTC
CACCTTGTTTCCCGGCAGGCCTCACTTTGGCCCCTTCACCGTCACCCACCCGGTGCTCCGCCTCCGCCGCCAGCCCTCGG
CGACATTGTGA---------------------------------------------------------------------
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-------------------------------------------------------
>chr1B_1_TraesCS1B01G393100
GTGCTTTGTTACGTGTTGTCCACACATTAGACTCCAGATTGTCACATCATGGGCTACTTATTTGTGGAGTATCTAGACCA
CCTCATCTTGAAGATGATCGCAGCTCAGATTTTGACATATGGACATCACCATACCAACTACTCCTATTTCCATAGGCAGC
CGTAGCAGTCAGTGTGATAAATTCAGTGAGCATTCTGCCTTGCTGTACGGGTTTTGTT-ACAGTAAGAATTGTCT--TAC
CGATAAGCTTATCATTTCTTAAGGAGAGATAACTTTCCAAGCAATCTTTTGACAAAGTATATTCTATATTATTTATGCAA
AGCACAATTATCGATCAAATTAATGATAATCCTCTATTAGTTGGATAAATTATTTGGCTTTCAACCATGCCTTTTCTTGG
AAGGGCAAAACTGGTAACTTTGTTAAGAAAAGACAAAGTGTTTTAGATTTCTATTGCACCAGTTGCAAAAATTATTTGGT
TTTCAATCATGCCTTCTTTTTTTTGAAAATGCCTTTTCTTGGAATGACAAGAATGGTTGTTGCCTTAAGAAAAGAAAACG
TGTTAAAGCTTCCTAATGCGTGCGTGGAGAAATGCAAATGTC--------ATAATAGCTCATAATCATGCTCCTCTGAGA
AACTCCTATTTTTTAATGAATGTCAAAGTGATAGTTTTGTGGACCTCGGTTGAAATATG--AATCTCCAGTTAACCCTAT
CCATAAAAGTACTTTCAAAGTTCAAATAGATTGCACACTTAGCCTAGCATTATAAAAAATA-TTTTTCAAATTATTGGAA
TAGCAGGAGACATGATATAATATTGGAGGTTGATGGGACAAGCATTAGATAACAATCC-AATCCAAACGTGTTCTCTGAT
ACTTAATCATGTTTGAGTTTATTTTGTCAAAACCGATGATTACTTACTTGATTGGCCGACCACTACTATATATGTGGTAC
TTGCTATTTGTTTCCTCTTTGCCTCATCACTCCAAGACCCCTCCCTTTCCTTGACATGGAGCTTGAGCTTAGTCTAGGCG
ATCTTCCAGCTCCAGTGAAGGCCAACAACACCATGCCCGCGCCGGCAACATGCCAAGGAGAAGACCACGACGACCTTGCG
CTAGGGCTACGAGTAATGGCTACCGAAAGAGCTGACCAAGATAACCAGAGGACAAGCATAGAAACTGCGGAGGGAGAAGA
---TAGTGACGAAGCATGCCGGGAACTGCCTGTCAGAGCAAGCCCTCTTCGCCAAGCCTCTGCACAAACAGGTAACTTGA
AGACAGTCCTGCAGAACAAGCTGTTGAA-TTGA------TCGGTTCCCATCCCAATAGGTCCATCCATATGTTGCTATGT
GCTCGTAGCTTC--TGTCTGTAAAATTCTTTGTATGCTGATGAGTCTTTTT-TCTGTACAGCGGGTGCGAATTCACGGGG
GTTTGATGTGAACGCTCCTGTTCCGGTGGATGACAGAGCGTTGATAGCGAGGTCCTTGTCACCGCCGTCCATGCATATGG
AGGTTCCTGTGGCACAGGGAGTTGACGAGGAAGCTTCAGAGGAAGAAGACAATAGAGGTGGAAGGGTGAGGAAGAAACTG
AGGCTGTCCAAGGAACAATCTGCGTTTCTAGAGGGTAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCACCTTCTG
CCTGCATATTTTCCTAATCCATCAAATGGAAACTTGCTTGCCTTGCCCTATCTTGTTCTAGTGCACCTAAAATAAGTATA
GATGATATAGATGG----ATTCATTCGGCATATATACAGGAGCAAAAGAGCCGTTTAGCCAACCAGCTGAGCCTTCGACC
ACGCCAGGTTGAGGTCTGGTTCCAAAACAGAAGAGCCAGGTATGTAACAAAATTTATACACCAGTAGTTTTCCC------
--TTTTGATGTCACCATTTTCCAAAACAGAAGAGCCAGGTAACAAATCTAACATCATGTCGTTCACAGGACGAAGCTGAA
GCAGACGGAGGCGGACTGCGAGCAACTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAGCGGGAGG
TGGCGGAGCTGCGCGCCTCCCGTGCCCCGTACCCGCTCTACAATCTGAATCACCACCTGTCTGGGTTCAGCACGGCGCTC
CCAGCGTGCTCATCATGTGACGCCACCACCCGTTCCACCGTCTCTTCCGTGTCGTCATCTCCGGGACCGTCGCCGATGTC
CACCTTGTTTCCCGGCAGGCCTCACTTTGGCCCCTTCACCGTCACCCACCCGGTGCTCCGCCTCCGCCGCCAGCCCTCGG
CGACATTGTGACGTGGCTGGCTAGCCCTGCCGGCCCGTTCATGTTGCCTAAGTTATGTAAATAGTCTCTTGT-TTTTTGT
CACCAGTGATGTACA------------------------------CATGTATGCATCATACTTTGTAAACTCTATATAGT
TTAGCTAGTTTTATAACGGTAGATGAGCTCGCTTA---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TAGTAGGTGTGGAATTTGC
TATTACGTGGCTGACTTTTAGAAGTCGATTTGGCTTTATGTAAAATATG--ATCGATCGATGATGTGGTTTGCAGA-GTG
TCATCCTGGCAATTGTCAGGAGACCTCTAATTTCCATTTGTGTACCAGTCACAGTGTAACACATGCCATTTTGTGGTTAA
ACATTAACTGTGACCCAATGACT--------TGGCTGAAAAGGACAATGAAATTGGTGATGTGGACCTCTGCAAACTACA
ATCATTGAGGCTGTATCACTGTCAGTA-GTATGCGTATGTGTAGGGGAATTTGCCAATTATGAAACTTCTCTTGGTGGTT
GCGTGATTGCCGGCAAAAAGAAAC----GAGAGGGAGCATGCAACGTGTACCAACACTGGCCAAATAATCAAACTGCTGT
ATGGAATTCTGGGTTCCGGACGGACGCCGTCAGCATCAAGTTGGAAATGCGCCGCACACCTGTCACCTAAGTGTGCACTA
CTACGTTAAAATTACGTCGATTATCTATATAGGGATATGGTTTGGACTT-------GGAATATGAAGAGGGTTAGGTGTT
TAGGTCGAACATATGAAACTCAGAACTATTGTATAAATGCGCCGTCGCATGGCCAAAAGAGACTAAACCAAGCTGTTGGC
TAGACAGGATATCATGAAGGGGATGGTCCGGGCGACTGTGCCAAGGGTGTCCGGACAGGCCATGGGGCTTTGAGATGTGC
CGGATGGCCATGGCGAACTTGTCATCGATCCGTATTATGTGATTTAGTTCATGGGAAGGAGCATCCGTAGTCATGCTCCA
GGG----GTATAGCCATGTTGACATATTTGGTTAACATATACTTCCTCCGTCCCA
>chr1A_1
GTGGTTTGTTACATGTTATCCACACATTAGACTCCAGATAGTCACATCAT-GGCTACTTATTTGTGGAGTATCTAGACCA
CCTCAGCTTGAAGATGATCGCAGCTCAGATTTTGACATATGGACATCACGATACCAACTACTCCTATTCCCATAGGCAGC
CGTAGCAGTCAGTGTGATAAATTCAGTGAGCATTCTGCCTTGCTATACGGGTTTTGTT-ACAGTAAGAATTGTCTCTTAC
CGATAAGCTTATCATTTCTTAAGGAGAGATAACTTTCCAAGCAATCTTGTGACAAAGCATATTCTATGTTATTTTTGCAA
AGCACAATTATTGATCAAATTAATGATAATCCTCTATTAGTTGAATAAATTGTTTGGCTTTCAACCATGCCTTTTCTTGG
AAGGGCAAAACCGGTAATTTTGTTAAGAAAAGACAAAGTGTGTTCTAGAT-------ACTAGTTGCATAAATTATTTGGT
TTTCAACC--------------------ATGCCTTTTCTTGGAAGGACAAGAATGGTTGTTTCCTTGAGAAAAGAAAACG
TCTTATATCTTCCTAATGTGTG---GGAGAAATGCAAATGTC--------ATAATAGCTCGTAATAATGCTCCTCTGAGA
ATCTCTTATTTTTTT---AATGTCAAAGTGATAGTTTTGTGGACCTCGGTTGAAATATG--AATCTCCAGTTAACCCTCT
CCATAAGAGTAGTTTCAAAGTTCAAATATATTGCACACTTAGCCTAGCATTATAAATAATATTTTTTAAAATTATTGGAA
TAGAAGGAAACATGATATAATATTGGAGGTTGATGGGACAAGCAATAGATAACAATCC-AATCCAAACGTGTTCTCTGAT
ACTTAA-CATGTTTGAGTTTATTTTATCAAACCCGATGATTACTTGCTTGATTGGCCGACCACTACTATATATGTGGTAC
TTGCTATTTGTTCCCTCTTTGCCTCATCACTCCAAGACCCCTCCCTTTCCTTGACATGGAGCTTGAGCTTAGTCTAGGCG
ATCTTCCAGCTCCAGTGAAGGCCA---GCACCATGCCTGCGTCGGCGACATGCCAAGGAGAAGACCACGACGACCTTGCG
CTAGGGCTACGAGTAACGGCTACCCAAAGAGCTGACCAAGATAACCAGAGGATAAGCATAGAAACTGCGGAGGGAGAAGA
AGATAGCGACGAAGCATGCCGCGAACTGCCTGTCAGAGCAAGCCCTTTTCGCCAAGCCTCTTCACAAACAGGTGAGTTGA
AGAGAATCCTGCGGAACAAGCTGTTGAATTGATCGGTTTTCGGTTCCCATCCCAGTAGGTCTATCCATATGTTGCTATGT
GCTCGTAGCTTCTGTGTCTGTAAAAGTCTTTGTATGCTGATGAGTCTTTTTATCTGTACAGCGAGTGCGAATTCACGCGG
GTTTGATGTGAACGCTGCTGTTCCGGTGGATGGCAGAGCATCGATAGCGAGGTCTTTGCCACCGCCGTCCATGCATATGG
AGGTTCCTGTGGCACAGGGAGTTGATGAGGAAGGTTCAGAGGACGAAGACAATGGAGGTGGAAGGGTGAGGAAGAAACTG
AGGCTGTCCAAGGAACAGTCTGCGTTTCTAGAGGGTAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCACCTTCTG
CCTGCATATTTTCCTAATCGATCAAAATAAGTG-----------------------------------------------
GATGATATAGCTGGAT--ATTCATTCGGCATATATACAGGAACAGAAGAGCTGTTTAGCCAACCGGCTGAGCCTTCGACC
GCGCCAAGTTGAGGTCTGGTTCCAAAACAGAAGAGCCAGGTATGTAACAAAATTTATATAGCAGTAATTTATATACCATT
--TTTTGATGTCACCATTTTCCAAAACAGAAGAGCGAGG----AAATCTAACACCATGTTTATCACAGGACGAAGCTGAA
GCAGACGGAGGCGGACTGCGAGCGCCTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAGCGGGAGG
TGGCGGAGCTGCGCGCCTCCCGTGCCCCGTACCCGCTCTACAATCTGAATCACCACCTGTCTGGGTTCAGCACGGTGCTC
CCAGCGGGCTCATCATGTGACGCCACCACCCGTTCCACAGTCTCCGCCGT---GTCATCCCCGGGACCGTCGCTGGTGTC
CACCTTGTTTCCCGGCAGGCCTCACTTTGGCCCCTTCACCGTCAGCCACCCGGTGCTCCCCCTCTGCCACCAGCCCTCGG
CGACATTGTGACATGGCTGGCTAGCCCGGCCGGCCCGTTCATGTTGCCTAAGTTATGTAAATAGTCT-----------GT
CAGCAGTGATGTACATACATA--------GAAAGGAGTCGAAAACCATGTATGCATC-TACTTTGTAAACTCTAT--AGT
TTAGCCAGTTTTATAACGGTAGATAAGCTCGCTTA---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGGTAGGTGTGGAATTTGC
TATTACGTGGCTGACTTTGGAAACTTGATTTGGCTTTGTAAAATATAT------GATCAATGATGTGGTTTGTAGAGGTG
TCATCCTGGCAATTGTCAGGAGATCTCTAATTCCCATTTGTGTACCAGTCACAGTGTAGCACATGCCATTTCCTGGTTAA
ACATTAACTGTGACCTAATGACTCTGCATGCTGGCTGAAAATAACAATGAAATTGATGATGCGGACCTCTGCAAATTACA
ATCATTGAGGCTGTATCACTGTCACTACGTATGCGTATGTGTAGGAGAATTTGCCAGTTATGAAACTTCTCTTGGTGGTT
GCGTGATTGCCGGCAAAAAGAAACAAAGGAGAGGGAGCATGCAACGTGTAGCAACACTGGCCAAATAATCAAACTGATGT
ATGGAATTCTGGGTTCCCGCCGGACGCCGTCAGCATCAAGTTGGATATGCGCCGCACACCTGTCACCTAAGTGTACACTA
C---GTTAGAATTATGTCGATTATCTATATAGGGATATAGTTTGGACTTTGGACTCGGAATATGCAGAGGGTTAGGTTTT
TAGTTCAAACATATGATAGTCAGGACTATTAATCAAGTGCACTGTCGCATGGCCAAAAGAGACTAAACGAAGCTGTTGGC
TAGACAGGAGATCACGAAGGGGATGGTCCGGGCGGCTGTGCCAAGGGTATCTGGACAGGCCATGGGGCATTGAGATGTGT
CTGATGGCCATGGCCAACTTGTCGTCGATCCGTATTATGTGATTTAGTTCATGG-AAGGAGCACCCATAGTCATGCTCCT
AGGGTATGTATAGCGATGTTGATATATTTGGTTAACATA----------------
>chr1D_1
GTGCTTTGTTACGTGTTGTCCATACATTAGACTCCAGATTGTCACATCATGGGCTACTTATTTGTGGAGTATCTAGACCA
CCTCAGCTTGAAGATGATCGCAGCTCAGATTTTGACATTTGGACATCACGGTACCAACTACTCCTATTTCCATAGGCAGC
CGTAGCAGTCAGTGTGATAGATTCAGTGAGCATTCTGCCTTGCTGTACGGATTTGGTTAACAGTAAGAATTGTCT--TAC
CGATAAGCTTATCATTTCTTAAGGAGAGATAACTTTCCAAGCAATCTTTTGACAAAGCATATTCTGTATTATTTATGCAA
TGCACAATTATTGATCAAATTAATGATAATCCTCTATTAGTTGAATAAATTATTTGGCTTTCAACCATGCCTTTTCTTGG
AAGGGCAAAACTGGTAATTTTGTTAAGAAAAGACAAAGTGTTTCAGATTTCTATTGCACTAGTTGCATAAATTATTTGGT
TTTCAACC--------------------ATGCCTTTTCTTGGAATGACAAGAATGGTTGTTGCCTTAAGAAAAGAAAATG
TCTTATAGCTTCCTAATGTCTG---GGAGAAATGCAAATGTCATAAACTCATAATAGCTCGTAATAATGCCCCTCTGAGA
ATCTCCTATT-TTTT---AATGTCAAAATGATAGTTTTGTGGACCTCGGTTGAAATATGAAAATCTCCAGTTAACCCTCT
CTATAAGAGTAGTTCCAAAGTTCAAATAGATTGCACACTTATCCTACCATGATAAAAAAAAA-----------ATTGGAA
TAGCAGGAGAGATGATATAATATTGGAGGTTGATGGGACAAGCATTATATAATAATAATAATACAAACGTGTTCTTTGAT
ACTTAATCATGTTTGAGTTTATTTTGTCAAAACTGATGATTACTTACTTGATTGGCCGACCACCACTATATATGTGGTAC
TTGCTATTTGTTTCCTCTTTGCCTCATCACTCCAAGACCCCTCCCTTTCCTTGACATGGAGCTTGAGCTTAGTCTAGGCG
ATCTTCCGACTCCAGTGAAGGCCA---ACACCATGCCTGCGCCGGCGACATGCCAAGGAGAAGACCACGACGACCTTGCA
CTAGGGCTACGAGTAACGGCTACCGAAAGAGCTGGCCAAGAAAACCAGAGAACAAGCATAGAAACTGCGGAGGG---AGA
AGATAGCGATGAAGCATGCCCCGAACTGCCTGTCAGAGCAAGCCCTTTTCGCCAAGCCTCTGCACAAACAGGTAAGTTAA
AGAGAATCCTGCAGAACAAGCTGTTGAATTTGA------TCGGTTCCCATCCCAGTAGGTCCATCCATATGTTGCTATGT
GCTCGTAGCTTCTGT--CTGTAAAATTATTTGTATGTTGCTGAGTCATTTTTTCTGTACAGCGAGTGCGAATTCACGCGG
GTTTGATGTGAACGCTGCTGTTCCGGTGGATGGCAGAGCATCGACAGCGAGGTCTTTGTCACCGCCGTCCATGCATATGG
AGGTTCCTGTGACACAGGGAGTTGATGAGGAAGGTTCAGAGGATGAAGACAATGGAGGTGGAAGGGTGAGGAAGAAACTG
AGGCTGTCCAAGGAACAATCTGCGTTTCTAGAGAGCAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCTATGCAAT
AT------TTTTTCTAATCGATCAAAATAAGTG-----------------------------------------------
GATGATGTAGCTGGATTCATTCATTCGGCATATATCCAGGAACAAAAGAGCTGTTTAGCCAACCGGCTGAGCCTTCGACC
ACGCCAAGTTGAGGTCTGGTTCCAAAACAGAAGAGCCAGGTATGTAACAAAATCTATACACCAGTAGTTTTCCCCTTTTG
AGTTTTGATGTCACCATTTTCCAGAACAGAAGAGCGACG----AAATCTAACATCATATTTATCGCAGGACGAAGCTGAA
GCAGACGGAGGCGGACTGCGAGCGCCTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAACGGGAGG
TGGCGGAGCTGCGCGCCTCCCGTGCCCCGTATCCGCTCTACAATCTGAATCACCACATGTCTGGGTTCGCCACGGCGCTC
CCAGCGTGCTCATCATGTGACGCCACCGCCCGTTCCACCGTCTCCGCCGT---GTCATCTCCGGGACCGTCGCCGATGTC
CACCTTGTTTCCCGGCAGGCCTCACTTTGGCCCCTTCACCGTCACCCACCCGGTGCCCCCCCTCCGCCGCCAGCCGTCGG
CGACATTGTGACGTGGCTGGCTAGCCTGGCCGGCCCGTTCATGTTGCCTAAGTTATGTAAATAGCCTCTTGTGTTTTTGT
CACCAGTGATGTACATACATACATACGTAGAAAGGAGTCGAAAACCATGTGTACATC-TACTTTGTAAACTCTAC--AGT
TTAGCCATTTTTATAACGGTAGATGAGCTGAGCTCGCTTATACTCCCTTCGTTCCTAAATACTCCCTCCGTTTCTAAATA
CTTGTCTTTCTAGGCATTTCAAATGACTATCACATACGGATGTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTT
ACTCCGTATGTAGTCACTTGTTGAAATCTCTATAAAGACAAATATTTAGGAACGGAGGGAGTAGTAGGTGTGGAATTTGC
TATTACGTGGCTGACTTTGGAAAGTTGATTTGGCTTTGTGTAAAAAATATAATCGATCGATGATGTGGTTTGCAGA-GTG
TCATCCTGGCAATTGTCGGCAGATCTCTAATTTCCATTTGTGTACCAGTCACAGTGTGGCACATGCCATTTCCTGGTTAA
ACATTAACTGTGACCCAATGACTCTGCGTGCTGGCTGAAAAGGACAATGAAATTGGTGATGCGGACCTCTGCAAATTACA
ATCATTGAGGCTGCATCACTGTCATCACATATGCGTATGTGTAGGAGAATTTGCCAGTTATGAAACTTGTCTTGGTGGTT
GCGTGATTGCCGGCAAAAAGAAAC----GAGAGGGAGCATGCAACGTGTAGCAACACTGGCCAAATAATCAAACTGATGT
GTGGAATTCTGGGTT----CCGGACGCCGTCAGCATCAAGTTGGATATGCGCCGCACACCTGTCACCTAAGTGTACACAA
C---GTTAAAATTATGTCGATTGTCTATATAGGGATATATATAG---TTTGGACTTGGAATATGCAGAGGGTTAGGTGTT
TGGGTCGAACATATGAAACTCAGAACTATTATATAAATGCGCCGTCGCATGGCCAAAAGAGACTAAACGAAGCTGTTGGC
TAGACAGGAGATCATGAAGGGGATGGTCCGGGCGCCTGTGCCAAGGGTGTCCGGACAGGCCATGGGGCATTGAGATGTGT
CTGATGGCCATGACCAACTTGTCATCGATCTGTATTATGTGATTTAGTTCATGGAAATGAGCGCCTATAGTCATGCTCCA
GGG----GTATAGCCATGTTAACATATTTGGTTAACATA----------------
>SNPs
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-----S-------------------------------------------S------------------------------
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---------------------------------------------------------S----------------------
-----------S-------------------------------S------------------------------------
-----------------S-----------------------------------------S-------S------------
------S-SSSSSSSSSSSSSSSSSSSS----------------------------------------------------
-S---S------------S---SSS-----------------------------------S----S--------------
-S------------SSSS------------------------------------------------------------S-
------S----S-------------------------------------------------------S------------
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------------------------SSS----------S--------S---------------------------------
----------------S---------------------------------------------------------------
------S--------------S------------------------S----------------------------S----
---S-S------------------------------------------------S-------------------------
---------------------------------------------------------------S-------------S--
----------------S---------------S------S-S------------S-------------------------
-------------------------S-------S---------S---------S--------------------------
--------------------------------------------------------------------------------
-------------------S------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
----------S------------------------------S---------S------------S---------------
------S-------------------------------------------------------------------------
-----------------------------------S---SSSS----------------SSS------------------
-----------------------SS-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SS----SSS---------------------------
-----------------------------------------------------------S--------------------
---------------------------S----------------------------------------------------
---------------------------------------------------------S-----------------SS---
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SSS----S-----------S----------S-------------------------------
-----------------------S----------------------------------S------------SS-------
-------------------------------------------------------------S-------------S----
------------------------S--------------------S----------S-----------------------
--------------------------------------------------S-------------------------S---
-----------------S-S-------------------------S----------------------------S-----
-SSS----------S-----------------------S-------------------------S---------------
------------------------------S-------------------------------------S-----------
---------S------------------------S---------------------------------S----------S
-S------------S---------------------------------------S--------S--S-------------
---------------------------------------SSSSSSSSSSSSSSSS
>forward_584
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----AAAGCTTCCTAATGCGTGCG--------------------------------------------------------
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>reverse_1712
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-------------------------------ACTTGCTTGCCTTGCCCTAT-----------------------------
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>forward_1554
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--------------CAGGGAGTTGACGAGGAAGC----------------------------------------------
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>reverse_3504
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---------------------------------------------------------------TCCGTAGTCATGCTCCA
GGG----------------------------------------------------
