>input_sequence_55328
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-------------------------------------------------------------------------ACAGTCC
AGATCGCCGTCTCCGCCGACCACCACTTCAACTCCTCCACTGCAGCCTGCAGGAAGCAGCTAGAGTACGCACCTACCTAG
C----------AGCCATGGTGAAGCTAGCCACGGCGCGGGACTGCCGCGCGTACAGCCTCGGCGCCACGGGCGGCGAGAC
GTCGCGCAACCGGCGGTGGGAGTACATCAACGCCGGGGTGTACGTCTTCGCCGCCGTCCTCCTCGTCGCCGGCTTCCTGG
CGCAGTTGTGGCCGTGGGCGGTGTCCACCAAGGCCGGCCTCGCCGTGGCCGTCGTCGGGCTGCTGGGCGTGCTGGGAGCG
AACGCGCACGACCTGCTGGCGCACGTCGCCGGCGTCGACTACAACCTTGGGCTGGCCGGGCTCGACACCCAGTTCGTGCT
CGTCGAGCTCGCCGCCCCCGCCGTGCAGCTCGCCGGCGCCGCGCTCACCCTGGTCGCGCTCATCTTGTTCGAAATCCAGG
TATGGAGTTGGAGTTCATCCATCCAAGCTAGTAGTACCAGC---------AAGTTCAGAGTTCAGACTGGAGTTGCATGC
CTGTTCTTTTCTATCTGAATCCATGGGACAAACCTCGCAGATGGAGAGAGGGCACCGGCGCGGCCTTGAGAGGCACGGCC
TGAACCTGCTCATCGCCGGGCCGGCGCTGTGGTGCCTCGGGTCCATACACAACATGTGCCAAGTCTACGAGCGAGCCAAC
GGGCACGTCCAGATCCTCCAGAAGAGCGTGCACATCCCGTTCCTGCTCGGCAGCACCCTCTTCTTCATCGGCGGCGTCGT
CAACCGGAACGACGTCCACGGCCGCTCCTCCCACAGCTCCACCCTACTGGTAACCAACTGAACACTTGAGATTCA-----
-------TTCAATCCAAGA-------------------------------------ACACGGCGGTGCTGAAATACTCTG
CTCTGGACGATGCAGGGGAGGAGCTGGGCGTGGTACTGCCTGTTCGGGAGCTTGCTGTTCCTGGCCGGAGGGCTGCTGAA
CCTCCTCAAGGTGTTCAAGATGCAGCAGATGGGCGGCCGGGGGCTGGAGAAGCTGCGCGGCGGTGCGCAGGAGCGGCTCA
GCAGGGAGAGGGAGGGCAAGGTGCCTCTCATCCTGGAGGAGGGCCGGATGGGGAAGCACGGAGGCAATGTAGGGGATACC
TGGGCGCCGGGGCCGGCGCCGCGGCACGAGCCGAGGGCTCCGCCCGTCCCGCCGCCGCCGGAGGGTTCTTACAAGGACGC
TGTCGTGAGCGGCGGCAACTAGTGTGATCTTGTCGTCCACGGCGGTGACGAATAATAAGAGAGGACGTGCCAT-------
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>chr3A_1_TraesCS3A01G137300
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGACGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGTGGCGAGCAC
CATGAGATGCTCTTCTTCCTAGACGTCGGCCAAGGCTTCCTCCTCCAGCAGCGCGGCGAGCTCTTCCTCGTCATCCGAGT
CCATCGCCGAGTCAGGCAAAACGCCGAACACCTTGCGCTCGGTGGGCGTGTACCCGCCGCTAAACCGCGCCTCCGCGGCC
GGAAACGGCGGCCGGAGACGCCCAGCTGCTGTGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGAAATGG
CTATCTAGCGGAGTAGGGCGGCGGGCCGTCGCCGGGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTC-CCTTTCGGTGTGGGCCACGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAACTGC
TCCCC-AGCGCGCCGGGTTCGGCCTATGACCGCCGGGCGGAAAAAAGGTCCGAACCGGCGATTTTCGGCGTCCTAAGGGC
GCAACTGTGCCGTTTTTTGGGCACCGGCGTCGAAAAAATGGCCTGGAAGGCT----TGTT-AGGGCGCGCCTGGAGATGC
CCTTAGTGAGAGAAACGTATATGTGACTATTTCGTCGATCTCAAGATAATGTACCGGCACATTGGGCAGAATGTACGCGC
GTATGCGTCTCTGCTGTGTTAAAAGAAACTACC-AACTCCGTGAGGTGAGGGTGACGTAGCCCCTTCTGTCTTGTGTGAT
ACTGCCCACGTGGTTTGACTCGTGTGTGAAGTGGCGTGTCTCGCGTATAGTCCAGAAGCACTCGTATCCC----------
ATAGTTTACTCGCCGG-CGCCGTGCGTGACGAATCAGAGCCCGACTCGCGCCTGCCT---------TACATGGCGCAGCA
TGCACGCGGCCACGTATCAGCCATGTGCT-CCGCTCGGTCTTACACATAGCGCCTTTCCGCCATC---GCTTCACAGTCC
AGATCGCCGTCTCCGCCGACCACCACTTCAACTCCTCCACTGCAGCCTGCAGGAAGCAGCTAGAGTACGCACCTACCTAG
C----------AGCCATGGTGAAGCTAGCCACGGCGCGGGACTGCCGCGCGTACAGCCTCGGCGCCACGGGCGGCGAGAC
GTCGCGCAACCGGCGGTGGGAGTACATCAACGCCGGGGTGTACGTCTTCGCCGCCGTCCTCCTCGTCGCCGGCTTCCTGG
CGCAGTTGTGGCCGTGGGCGGTGTCCACCAAGGCCGGCCTCGCCGTGGCCGTCGTCGGGCTGCTGGGCGTGCTGGGAGCG
AACGCGCACGACCTGCTGGCGCACGTCGCCGGCGTCGACTACAACCTTGGGCTGGCCGGGCTCGACACCCAGTTCGTGCT
CGTCGAGCTCGCCGCCCCCGCCGTGCAGCTCGCCGGCGCCGCGCTCACCCTGGTCGCGCTCATCTTGTTCGAAATCCAGG
TATGGAGTTGGAGTTCATCCATCCAAGCTAGTAGTACCAGC---------AAGTTCAGAGTTCAGACTGGAGTTGCATGC
CTGTTCTTTTCTATCTGAATCCATGGGACAAACCTCGCAGATGGAGAGAGGGCACCGGCGCGGCCTTGAGAGGCACGGCC
TGAACCTGCTCATCGCCGGGCCGGCGCTGTGGTGCCTCGGGTCCATACACAACATGTGCCAAGTCTACGAGCGAGCCAAC
GGGCACGTCCAGATCCTCCAGAAGAGCGTGCACATCCCGTTCCTGCTCGGCAGCACCCTCTTCTTCATCGGCGGCGTCGT
CAACCGGAACGACGTCCACGGCCGCTCCTCCCACAGCTCCACCCTACTGGTAACCAACTGAACACTTGAGATTCA-----
-------TTCAATCCAAGA-------------------------------------ACACGGCGGTGCTGAAATACTCTG
CTCTGGACGATGCAGGGGAGGAGCTGGGCGTGGTACTGCCTGTTCGGGAGCTTGCTGTTCCTGGCCGGAGGGCTGCTGAA
CCTCCTCAAGGTGTTCAAGATGCAGCAGATGGGCGGCCGGGGGCTGGAGAAGCTGCGCGGCGGTGCGCAGGAGCGGCTCA
GCAGGGAGAGGGAGGGCAAGGTGCCTCTCATCCTGGAGGAGGGCCGGATGGGGAAGCACGGAGGCAATGTAGGGGATACC
TGGGCGCCGGGGCCGGCGCCGCGGCACGAGCCGAGGGCTCCGCCCGTCCCGCCGCCGCCGGAGGGTTCTTACAAGGACGC
TGTCGTGAGCGGCGGCAACTAGTGTGATCTTGTCGTCCACGGCGGTGACGAATAATAAGAGAGGACGTGCCATGGCGGCT
GGTAGAGGAGAAACATTGGCTTAGGGCGACGCCATCCTGTATTTTCGTATATGTACACGATGTCATGTG-----AATTAT
ATCGACTTGCTGCCTATGATTCTACTACTACTTGCTTAGAGCGTGAATCTGCGGCGGGTCACCATTTGCAAGTTTCCCGG
CGACGCCGGGAAGCTCGTCGGCGACATCGTGGAATTGGTGCTCGCCTGCTTCGTCCTGCCTAGTTGCAATCGAAAATTCC
ATGATGAAACTGCTAACAGCATCTTCATCTCCAACAGCCACCCAACGAGTGGCGTGCTAAAATTCATATTCATTTTGCAG
CGCGTCCATCGCCTGCTTTGGCGTGCTAAAATTCATATTCATTTTGCAGCGCGTCCATCGCCTGCTTTGGCGTGACGGGG
AGCGCTGGCTTTGGTGGCCACGGTAAATTTAGCTCGTGCATAGCCACGGTGAATTTAGCTCGTGCATAGCTCCAGCGCGG
CGGGGAGCGTTGGCTTCAGCAATCGTTGTAAATTTAACGCGTGTAACTCCAACAGGCGCGACCGTTGTAAATTTAGCGCG
TGTAACTCCAGCAGGCGCCGATCGCCTACTTTGGCGTGGCGAGGAGCGCTGGCCGCGGTAAATTTAGCTCGTGCGTAGCT
TCAGCGCGGCTGGGAGCGCTGGCTTCAGCGACCATTGTAAATTTAGCGCGTGTAACTTTAGTAGACGCGCAAATGCAGCC
TGCGCCCTCGCACAAACAAAATATTTTGTTTATAGATAAGAAAACAATACATACTAGTTCATAACATAGATAAAATCGAT
ACATACAACTACATAATTAAACTACGGTGCAACTAGATAAACTACGATGCAACTAGAACCGTCTTGATCATCATCCTCAC
TGGTGTTGTTTGATGTAGAGATTCACACAAATCATTAGAACGACTTCCCACCGACGTTAACGAGATCGTACTGTGATATG
GCCAGTGTCTTCCGCCTGTTCGCCCGCTCCGTGCGGCG
>chr7A_1
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATGAGATGCTCTTCTTCCTGGACGTCGGCCGCGGCTTCCTCCTCCAGCAGCGCGGCGAGCTCTTCCTCGTCATCCGAGT
CCATCGCCGAGTCAGGCAAAACGCCGAACACCTTGCGCTCGGTGGGCGTGTACCCGCCGCTAAACCGCGCCTCCGCGGCC
GGAAAAGGCGGCCGGAGACGCCCAGCTGCTGTGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGGAATGG
CTATCTAGCGGAGTAGGGCGGCG-GCCGTCACCGAGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTCCCTC-TCGGTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGGCCCCAACTGC
TCCCC-AGCGCGCCGGGTTCGGCCTGTGACCGCCGGGCGGAAAAAAGGTTCGAACCAGCGATTTTCGGCGTCCTGCGGGC
GCGACTAGGCCGTTTTTTCGGCGCCGGTGCCGAAAAAGTGGCCTGGA--GGG-GTCTGTTGGGGACGCGGCTGGAGATGC
CCT-----------------------------------------------------------------------------
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>chr7A_1
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATGAGATGCTCTTCTTCCTGGACGTCGGCCGCGGCTTCCTCCTTCAGCAGCGCGGCGAGCTCTTCCTCCTCATCCGAGT
CCATCGCCGAGACAGGCAAAACGCCGAACACCTTGCGCTCGGTGGGCGTGTACCCACCGTTAAACCGCGCCTCCGCGGCC
GGAAACGGCAGCCGGAAACGCCCAGCTGCTGTGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGGAATGG
CTATCTAGCGGAGTAGGGCGGCG-GCCGTCGCCGGGATATAACTAGTGGTGGCCAAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTCCCCTGTCGGTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAACTGC
TCCCC-AGCGCGCCGGGTTCGGTCTGTGACTGCCGGGCGGAAAAAAGGTCTGAACCGGCGATTTTCGGCGTCCTGGGGGC
GCAACTAGGCCGTTTTTTCGACACCGGCGCCAAAAAAATGGCCTG-A--GGG-GCCTGTTGAGGGCGCGGCTGGAGATGC
CCT-----------------------------------------------------------------------------
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>chr7A_1
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATCAGATGCTCTTCTTCCTGGACGTCGGCCGCGGCTTCCTCCTCCAGCAGCGCGGCGAGCTCTTCCTCCTCATCCGAGT
CCATCGCCGAGACAGGCAAAACACCGAACACCTTGCGCTCGGTGGGCGTGTACCCGCCGTTAAACCGCGCCTCCGCGGCC
GGAAACGGCGGCCGGAAACGCCCAACTGCTGTGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGGAATGG
CTATCTAGCGGAGTAGGGCGGCG-GCCGTCGCCAGGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTTCCCTGTCGGTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAACGGC
TCCCC-AGCGCGCCGGGTTCGGCCTGTGACCGCCGGGCGGAAAAAAGGTCCGAACCGGCGATTTTCGGCGTCCTGGGGGC
GCGACTGGGCCGTTTTTTTGGCGCCGCCGCCGAAAAAGTGGCCTGGGGGGGG-GCCTGTTGGGGGCGCGGCTGGAGATGC
CCT-----------------------------------------------------------------------------
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>chr5A_1
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCTGCGAGCAC
CATGAGATGCTCTTCTTCCTGGATGTCGGCCGTGGCTTCCTCCTCCAGCAGCGCGGCGAGCTCTTCCTCGTCATCCGAGT
CCATCGCCGAGTCAGGCAAAACGCCGAACACCTTGCGCTCGGAGGGCGTGTACCCGCCGCTAAACCGCGCCTCCGCGGCC
AGAAACGGCGGCCGGAAACGCCCAGCTGCTGTGGGAGGGGCTGCCGCAGCGAAGCGCTGCTATTTTCCGGTGGGGAATGG
CTATCTAGCGGAGTAGGGCGGCG-GCCGTCACCGGGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTCCCCTGTCGGTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAACTGC
TCCCC-AGCGCGCCGGGTTCGGCCTATGACCGCCGGGCGGAAAAAAGGTCCGAACCGGCGATTTTCGGCGTCCTGGGGGC
ACGACTGGGCCGTTTTTTCGGCGCCGGCGCCGAAAAAGTGGCCT---GGGGG-GCCTGTTGGGGGCGCGGCTGGAGATGG
CCT-----------------------------------------------------------------------------
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>chr5A_1
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATGAGATGCTCTTCTTCCTGGACGTCGGCCACGGCTTCCTCCTCCAGCAGCGCGGCGAGCTCTTCCTCGTCATCCGAGT
CCATCGCCGAGACAGGCAAAACGCCGAACACCTTGCGCTCGATGGGTGTGTACCCTCCGCTAAACCGCACCTCCGCGGCC
GGAAACGGCGGCCGGAAACGCCCAGCTGCTGTGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTTCGGCGGGGAATGG
CTATCTAGCGGAGTAGGGCGGCG-GCCGTCGCCGGGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAAGCGAG
TCGGGGGAAGAAAACCTTGACTTTTCCCCTGTCGGTGTGGGCCAGGCGTGCTTTTCCCTACCGCCGGAGCCCCCAACTGC
TCCCC-AGCGCGCCGGGTTCGGCCTGTGACCGCCGGGCGGAAAAAAGGTCCGAACCGGCGATTTTCGGCGTCCTGGGGGC
GCGACTGGGCCGTTTTTTCGGCGCCGGCGCCGAAAAAGTGGCCT---GGGGG-GCCTGTTGGGGGCGCGGCTAGAGATGC
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>chr2A_1
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATGAGATGCTCTTCTTCCTGGACGTCGGCCGCGGCTTCCTCCTCCAGCAGCGCGGCGAGCTCTTCCTCGCCATCCGAGT
CCATCGCCGAGTCAGGCAAAACGCCGAACACCTTGCGCTCGGTGGGCGTGTACCCGCCGCTAAACCGCGCCTCCGCGGCC
GAAAACGGCGGTCGGAAACGCCCAGCTGCTGTGGAAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGGAATGG
CTATCTAGCGGAGTAGGGTGGCG-GCCGTCGCCGGGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTCCCCTGTCGGTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAAGTGC
TCCCC-AGCGCGCCGGGTTCGGCTTGTGACCGCCGGGCGAAAAAAA-GTCCGAACCGGCGATTTTCGGCGTCCTGGGGGC
GCGACTGGACCGTTTTTTCGGCGCCGGCGCCGAAAAAGTGGCCT---GGGGG-GGCTGTT-GGGGCGCGGCTAGAGATGC
CCTTAGT-------------------------------------------------------------------------
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>chr2A_1
GCTTTAACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATCAGATGCTCTTCTTCCTGGACGTCGGCCGTGGCTTCCTCCTCCAGCAGCGCGGCGAGCTCTTCCTCCTCATCCGAGT
CCATCGCCGAGACAGGCAAAATGCCGAACACCTTGCGCTCGGTGGGCGTGTACCCGCCGTTAAACCGCGCCTCCGCGGCC
GGAAACGGCGGCCGGAAACGCCCAGCTGCTGTGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGGAATGG
CTATCTAGCGGAATAGGGCGGCG-GCCGTCGCCAGGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTCCCCTGTCGCTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAACGGC
T-CCC-AGCGCGCCGGGTTCGGCCTGTGACCTCCGGGCGGAAAAAAGGTCCGAACCGGCGATTTTCGACGTCCCGGGGGC
GCGACTGGGCCGTTTTTTCGGCACCGGCGCCGAAAAAGTGGCCT---GGGGAGGCCTGTTGGGGGCGCGGCTGGAGATGC
CCT-----------------------------------------------------------------------------
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>chr6B_1
GCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATCAGATGCTCTTCTTCCTGGACGTCGGCCGCGGCTTCCTCCTCCAGCAGCGCGGCGAGATCTTCCTCCTCATTCGAGT
CCATCGCCGAGACAAGCAAAACGCCGAACACCTTGCGCTCGGTGGGCGTGTACCCGCCGTTAAACCGCGCCTCCGCGGCC
GAAAACGGCGGCCGGAAACGCCCAGCTGCTGTGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGGAATGG
CTATCTAGCGGAGTAGGACGGCG-GCCGTCGCCGGGATATAGCTAGTGGTGGCCGAGGG-CGCGGGGGGTGCGAGGCGAG
TCGGGGGTAGAAAACCTTGACTTTTCCCCTGTCGGTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAACGGC
T-CCCCAGCGCGCCGGGTTCGGCCTGTGACCGCTGGGCGGAAAAAAGGTTCGAACCGGCGATTTTCGGCGTCCTGGGGGC
ACGACTGGGCCGTTTTTTCGGCGCCGGCGCCGAAAAAATGGCCT---GGGGG--CCTGTTGGGGGCGCGGCTGGAGATGC
CCTTAGT-------------------------------------------------------------------------
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>chr1B_1
GCTTTCACCCGCCCCGGTGCCGAGCCACCTCGACGCGGCTTTTCATTGCTCGCCAGCAGCTGGGCGAGGGCGGCGAGCAC
CATCAGATGCTCTTCTTCCTAGACGTCGGCCGCGGCTTCCTTCTCCAGCAGCGCGGCGAGCTCTTCCTCCTCATCCGAGT
CCATCGCCGAGACAGTCAAAACGCTGAACACCTTGCGCTCGGTGGGCGTGTACCCGCCGTTAAACCGCGCCTCCGCGGCC
GGAAACGGCGGCCGGAAACGCCCAGCTGCTGCGGGAGGGGCTGCCGCGGCGAAGCGCTGCTATTTTCCGGCGGGGAATGG
CTATCTAGCGGAGTAGGCCGGCG-GCCGTCGCCGGGATATAGCTAGTGGTGGCCGAGGGGCGCGGGGGGTGCGAGGCGAG
TCGGGGGAAGAAAACCTTGACTTTTCCCCTGTCGGTGTGGGCCAGGCGTGCTTTTCCCTAGCGCCGGAGCCCCCAACGGC
T-CCCCAGCGCGCCGGGTTCGGCCTGTGACCGCCGGGCGGAAAAAAGATCCGAACCGGCGATTTTCGGCGTCCTGGGGGC
GCGACTGGGCCGTTTTTTCGGCGCCGGCGCCGAAAAAGTGGCCT---GGGGGGGCCTGTTGGGGGCGCGGCTGGAGATGC
CCT-----------------------------------------------------------------------------
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>chr3D_733
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--------------------AAAAAAAACTACCAAACTCCGTGAGGTGAGGGTGACGTAGCCCCTTCTGTCTTGTGTGAT
ACTGCCCACGTGGTTTGACTCGTGTGTGAAGTGGCGTGTGTCTCGTATAGTCCAGAACCACTCGTATCCC----------
ATAGTTTACTCGCCGG-CGCCGTGCGCGACGAATCAGAGCCCGACTCGCGCCTGCCT---------TACATGGCACAGCA
TGCACGCCGCCACGTATCTGCCATGGCCCCCCGCCCGAGCTTACACATAGCGCCTTTCCGCCATCCTCGCTCCACAGTCC
AGAGCGCCGTGTCCGCCGACCACCACTTCAACTCCTCCACTGCAGCCTGCAGGAAGCTACTAGCTAGAACCCGAATAATC
TG----CACCTAGCCATGGTGAAGCTAGCCACGGCGCGGGACTGCCGCGCGTACAGCCTCGGCGCCACGGGCGGCGAGAC
GTCGCGCAACCGGCGGTGGGAGTACATCAACGCAGGGGTGTACGTCTTCGCCGCCGTCCTCCTCGTCGTTGGCTTCTTGG
CGCAGCTGTGGCCGTGGGCGGTGTCCACCAAGGCCGGCCTCGCGGTGGCCGTCGTCGGGCTGCTGGGCGTGCTGGGAGCG
AACGCGCACGACCTGCTGGCGCACGTCGCCGGCGTCGACTACAACCTTGGCCTGGCCGGGCTCGACACCCAGTTCGTGCT
CGTCGAGCTCGCCGCCCCCGCCGTGCAGCTCGCCGGCGCCGCGCTCACCTTGGTCGCGCTCATCTTGTTCGAGATCCAGG
TATGGAGTTGGAGTTCATCCATCCGAGCTAGTAGTATCAG---------TAAGTTCAGAGTTCAGACTGGAGTTGCATGC
TGTTCTTTT-TTATCTGAATGAC----ACAAACGTCGCAGATGGAGAGAGGTCACCGGCGTGGCCTGGAGAAGCACGGCC
TGAACCTGCTCATCGCCGGGCCAGCGCTGTGGTGCCTCGGGTCCATACACAACATGTGCCAAGTCTACGAGCGAGCCAAC
GGGCACGTCCAGATCCTCCAGAAGAGCGTGCAGATCCCGTTTCTGCTCGGCAGCACCCTCTTCTTCATCGGCGGCGTCGT
CAACCGGAACGACGTCCACGGCCACTCCTCCCACAGCTTCACCCTACTGGTAACCAACTGAG----TGAGATCCA-----
-------TTCAATTCAAGA-------------------------------------ACA---GGGTGCTAAACTACTCTG
CTCTGGA---TGCAGGGGAGGAGCTGGGCGTGGTACTGCCTGTTCGGGAGCCTGCTGTTCTTGGCGGGAGGGCTGCTGAA
CCTGCTCAAGGTGTTCAAGATGCAGCAGATGGGCGGGCGGGGGCTGGAGAAGCTGCGCGGCGGCGCGCAGGAGCGGCTTA
GCAGGGAGAGGGAGGGCAAGGTGCCTCTCATCCTGGAGGAGGGACGGAGGGGGAAGCACGGAGGCAATGTAGGGGACACC
TGGGCGCC---GCCGGCGCCGCGGCACGAGCCGAGGGCTCCGCCAGTCCCGCCGCCGCCGGAGGGTTCTTACAAGGACGC
TGTCGTGAGCGGCGGCAACTAGTGTGATCTTGCCGTCCACGGCGGTAACGAATAATAAGAGAGGACGTGACAAGGCAGCT
GGTAGAGGCGAAGCATTGGCTTAGGGCGACGCCATCCTGTATTTTCCTATCTGTACACGATGTCATGTG-----AATTAT
ATCGACTTGCTGCCTATGATTCTAC-------------------------------------------------------
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>chr3B_771
GCCCGTG-------------------------------------------------------------------------
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------------------------------------------------------------------CTGTCTTGTGTGAT
CGTGCCCACGTGGTTTGACTCATGTGAGAAGTGGCGTCTGTCTCGTATAGTCCAGAAGCACACTCGTTTCCTTTCCTACT
ATAGTTTACTCGCCGGGCGCCGTGCGTGACGAATCAGCGCCCGACTCGCGCCTGCCTTACATCAGTTACATGGCGCAGCA
TGCACGCCGCCACGTATCTGCCATGGACCCCCGCCCGAGCTTACACATAGCGCCTTTCCGCCATCCTCCTTCCACAGTCC
AGATCGCCGTGTCCGCCGACCACCACTTCAACCCCTCCACTGCAGCCTGTAGGAAGCTAA-AGCTAGAACTAGAACAATC
TGCCTACACCTAGCCATGGTGAAGCTAGCCACGGCGCGGGACTGCCGCGCGTACAGCCTCGGCGCCACGGGCGGCGAGAC
GTCGCGCAACCGGCGGTGGGAGTACATCAACGCCGGGGTGTACGTCTTCGCCGCCGTCCTCCTCCTCGCCGGCTTCCTGG
CGCAGCTGTGGCCGTGGGCGGTGTCCACCAAGGCCGGCCTCGCCGTGGCCGTCGTCGGGCTGCTGGGCGTGCTGGCAGTG
AACGCGCACGACCTGCTGGCGCACGTCGCCGGCGTCGATTACAACCTTGGCCTGGCCGGGCTCGACACCCAGTTCGTGCT
CGTCGAGCTCGCCGCCCCCGCCGTGCAGCTCGCCGGCGCCGCGCTCACCTTGGTCGCGCTCATCTTGTTCGAAATCCAGG
TATGAAGTTGGAGTTCATCCATCCGAGCTAGTAGTACTAGTATCAGTAATAAGTTCAGAGTTCAGACTGGAGTTGCATGC
TGTTCTTTTTTTATCTGAATCCATGGAACAAACGTCGCAGATGGAGAGAGGGCACCGGCGTGGCCTGGAGAAGCACGGCC
TGAACCTGCTCATCGCCGGGCCAGCGCTGTGGTGCCTCGGGTCCATACACAACATGTGCCAAGTCTACGAGCGAGCCAAC
GGGCACGTCCAGATCCTCCAGAAGAGCGTGCACATCCCGTTTCTGCTCGGCAGCACCCTCTTCTTCATCGGCGGCGTCGT
CAACCGGAACGACGTCCACGGCCACTCCTCCCACAGCTTCACCCTACTGGTAAGTAACCGAATGAACAAGCCAATGAATA
CTTGAGCTTTAATTCAAGACCATGTACATGATCGGGCCAATTTAGCGTTGTAACTGACA---CGGTGATGAAATGCTCTG
CTCTG---GATGCAGGGGAGGAGCTGGGCGTGGTACTGCCTGTTCGGGAGCTTGCTGTTCTTGGCGGGAGGGCTGCTGAA
CCTGCTCAAGGTGTTCAAGATGCAGCAGATGGGCGGGCGGGGGCTCGAGAAGCTGCGCGGCGGCGCGCAGGAGCGGCTTA
GCAGGGAGAGGGAGGGCAAGGTGCCTCTCATCCTGGAGGAGGGCCGGAGGGGGAAGCACGGAGGCAATGTAGGGGATACC
TGGGCGCC---GCCGGCGCCGCGGTACGAGCCGAGGGCTCCGCCCGTTCCGCCGCCGCCGGAGGGTTCTTACAAGGACGC
TGTCGTGAGCGGCGGCAACTAGTGTGATTTTGCAGTGCACCGCGGTAACGAATAATAAGAGAGGACGTGCCATGGCAGCT
GGTAGAGGAGAAGCATTGGCTTAGGGCGACGCCATCCTGTATTTCCGTATCTGTACACGATGTCATGTACTGTAAATTAT
ATGGACTTGCTGCCTACGATTCTACTACTACTTGCTCAGAGCGTGAATCTGCGGCGGTTCACCTTTTGCAAGTTTTGCGG
CGACGCCGGGAAGCTCGTCGGCGACATCGAGGAATTGGTGCTCGCCTGCTTCGCCCTGCCTTATTGCAATCGAAAATTCC
ATGGTGAAACTGCCAA----------------------------------------------------------------
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>SNPs
----------------------------------------------------------------------S---------
--------------------------------S-----------------------------------------------
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--------------------------------------------------------------------------S-----
-----------------------S--------------------------------------------------------
------------------------------S-------------S-----------------------------------
--------------------------------------------------------------------------SS----
-------S----------S----------S-----------------S--SS-----------------S----------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS----S-------------------------------------------------------
---------------------------------------S--S-------------------------------------
--------------------------------------------------------------------------------
-------S----------S------SS-S-----S--SS--------------------------------S--------
----------S----------------------------------------------SS----SSSSSS-S-SS--SSSS
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------------------S------------------------------
------------------------S---------------S---------------------------------------
SSS-SS----S---------------S------S--------------------------S-----S----S--------
----------------------S---------------------------------------------------------
-----------------------------------------S--------------------------------------
-----------------------S--------------S-----------------------SSSS------S-------
-------------S---------------------------------------------SSS------------------
-------S----------------------------------------------------S----S--------------
---S--------------------------------S--------------------------S--------------S-
------------------------------------------------S-------------------------------
--------SSS---------------------------------------------------------------------
--------------------------------S-------------S-----------------------------S---
------------S-------------------------------------S-----------------------------
------------------------------------S--------------------S-----S-----------SS---
-----------------------------S-----------------------S-------SS-----------------
---S---------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_719
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CATTGGGCAGAATGTACGCG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTCATCTCCAACAGCCACCC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
