>input_sequence_55274
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--------AT-----GCTTGAACCTTGTGTGAA--------------GATGGCAGTGGCATCATCTCACACCTACG----
-----CTCCTCTCCTGCTCTTGTTCCTCCTG------------GCCTGTTCATGCAGGGCATCACCCGGCCATGCGGT--
-------------CGACCCTACCTGCCCTCCGGCCAAGGCGTCGGCGGTGGCAGTGGAAACCTTGGACTGCGGCGGACCT
CGGTGCCAGCCACCGGCTCCACATGTTCCGGTCCCGGTGTTCCCGTATGACATCGACCCGATGCAGTTCGCGCTGAACCT
GGAGTACACCGAGGCCGAGTTCTTCCTCCACGCAGTGTTCGGTGTAGGGCTCGACCAGATCGCGCCGAACCTGATGTTGG
GAGGGCCACCTCCGG-----------------------------------------------------------------
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---------------------------------TGGGCGCCATGAAAGCCAACCTCGATGAGGTGACATGGCGCATCGTC
GCGGAGTTTGGCCTTCAAGAAGTCGGCCACATCAGGTGTGTAAAAGATCCATTCAACGA-TTGCTCCCCTTCACCATTTC
AAATTGCAATACACTTGGA-----------------------TTGGATAGAGGCAAGTTGGTACTGAAAATCCATATGCT
TCCGGTTTATTCTCGTTGCAGGGCTATCCAGAACACAGTTGGTGGGTTCGCTAGGCCAAAGATAGACCTGAGCGCCAGCA
ACTTTGCAAGGGTGATGGACCAAGCATTTGGTTACCATTTGGACCCTCCTTTCGACCCCTACATCGACAGCCGCAACTTC
CTGCTGGCGTGCTACGTGATCCCCTACCTGGGCATCAACGGCTACACCGGCACCAACCCCATCATCGACGGCTACGAGAC
TAAACACGTAAC------C-AAATCCACCATCCAACATCGTCTCCATGCACATGGGCATTGAAACCTGCAAGTTACACAC
AAGTTGAGTTGAGGCCACTGTATTTGCTGCAGCTTCTTGCAGGGTTGCTAGCCGTGGAGGCGGGGCAGGACGCGGCCTTC
CGCGCGCTGCTCTTCGAGCGCAAGAGCGAGACGGTGCCGCCCTACAAGGGGATCACGGTGGCAGAGTTCACCGACCGCAT
CTCCGCGGCGAGAAACCAGCTGGGGAAATGCGGGGTGAAGGACGAGGGGCTCACCGTGCCGCCCGAGCTTGGCGCGGAGG
GCAGGATCTGCAC--------------CAACGTGCTCTCCGCCGACAGGGACTCGCTCTCCTA-CGCCCGCACGCCGGAG
GAGCTGCTCAGCATCCTGTACCTCACCGGCGACGAGCACGTGCCCGGTGGCTTCTTCCCGGAGGGCGCGAACGGGAAGAT
AGCACGGGAGTTTCTTCGCAAGCCGTTTGCAGCTGGGGATAACAAGGCGCCAGCAAATTAA-------------------
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>chr7B_1_TraesCS7B01G337300
TTGCA---------------------------------------------------------------------------
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-----------------------------------------------TGCTAAGAGATGATCACCTGGAGCACCCCATCT
CTTCCATTTCCTCGTCCCACTGTCATCCAAGTCG--------------------------CCTATTTTAAGCACGCCGGC
AGTTTGAGTGGCGGTGATTAATTTAGACTTAGAGGTGTGAGATAGTTAAGCTCGCTTTCGTTAACCGCTCCCTTCTACTA
CCTCGCAAGACCATTGGAAAGCAAGATGAACCGTACAAGCATTTGCCTTTCCCCAATGG--AAAAAGGAAAGGTGGCAGT
TTAGCCACAGCCACAGCTTGAAGCTTAACCACAATGGAAAAAAAGGGAAGGTAGCAGTTTAGCCACCTCCTTGGCTCGAA
GCTTAACCACAATATAAAATCAGCTGGTCAGCATTATGTCATGCGTGATTCATTCCAGTCAGGAAGGGTAGCTGCAA---
---------------------------TGAAGATTTCCAGCAAAGGAAAGGCGTTCCCCATGGGAAACTACAAGCAAGGA
AAGGCTTGAATTCTCTGGACACCCTGACAACAACCACATTAACTGCGGTGTATAAACAACATGTCATCAGTGAAGAAAAT
TTTGGCGAAGTGACCCGCAGATGCTCATATCTGACCTAGAAATAGCATCTGTGCCCTGCATAG-TCCAGGGTTTCTATGA
ATTTGGAAGTTGCCACTTAGCAGGTTTCCATGGGTGATAGTGATACAGAGATAGGCTGAAGAAAATTGGGAGCGATGC--
----ACCATGGCAATCCAATTTGAAGTGAAGCACCTGAACTCTCAAG-----AAAGTGATCTGTCTGCGAGTCTCCCTTC
TTGGCTTCGACAAGTAATCTATTTCCAGATACCTCCAAGCGTCAGCGATCCA-----GATTTCTCGCACACAACG-TCAC
GTCGCAGAAGGAGGTAAGCTC-AGCAACAATCACAGTCAAAGAACGTTAGTTAGCTGATTGC---------TTCAGAAGG
GAAGCTTCCAGATTGTTGGATATGCTACGCTGATTCGCTATAAGTTCAGCAAAGATGACACCATGCACCTTCAGTCCAGC
ATCCTCGGAT-----GCTTGAACCTTGTGTGAA--------------GATGGCAGTGGCATCATCTCACACCTACG----
-----CTCCTCTCCTGCTCTTGTTCCTCCTG------------GCCTGTTCATGCAGGGCATCACCCGGCCATGCGGT--
-------------CGACCCTACCTGCCCTCCGGCCAAGGCGTCGGCGGTGGCAGTGGAAACCTTGGACTGCGGCGGACCT
CGGTGCCAGCCACCGGCTCCACATGTTCCGGTCCCGGTGTTCCCGTATGACATCGACCCGATGCAGTTCGCGCTGAACCT
GGAGTACACCGAGGCCGAGTTCTTCCTCCACGCAGTGTTCGGTGTAGGGCTCGACCAGATCGCGCCGAACCTGATGTTGG
GAGGGCCACCTCCGG-----------------------------------------------------------------
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---------------------------------TGGGCGCCATGAAAGCCAACCTCGATGAGGTGACATGGCGCATCGTC
GCGGAGTTTGGCCTTCAAGAAGTCGGCCACATCAGGTGTGTAAAAGATCCATTCAACGA-TTGCTCCCCTTCACCATTTC
AAATTGCAATACACTTGGA-----------------------TTGGATAGAGGCAAGTTGGTACTGAAAATCCATATGCT
TCCGGTTTATTCTCGTTGCAGGGCTATCCAGAACACAGTTGGTGGGTTCGCTAGGCCAAAGATAGACCTGAGCGCCAGCA
ACTTTGCAAGGGTGATGGACCAAGCATTTGGTTACCATTTGGACCCTCCTTTCGACCCCTACATCGACAGCCGCAACTTC
CTGCTGGCGTGCTACGTGATCCCCTACCTGGGCATCAACGGCTACACCGGCACCAACCCCATCATCGACGGCTACGAGAC
TAAACACGTAAC------C-AAATCCACCATCCAACATCGTCTCCATGCACATGGGCATTGAAACCTGCAAGTTACACAC
AAGTTGAGTTGAGGCCACTGTATTTGCTGCAGCTTCTTGCAGGGTTGCTAGCCGTGGAGGCGGGGCAGGACGCGGCCTTC
CGCGCGCTGCTCTTCGAGCGCAAGAGCGAGACGGTGCCGCCCTACAAGGGGATCACGGTGGCAGAGTTCACCGACCGCAT
CTCCGCGGCGAGAAACCAGCTGGGGAAATGCGGGGTGAAGGACGAGGGGCTCACCGTGCCGCCCGAGCTTGGCGCGGAGG
GCAGGATCTGCAC--------------CAACGTGCTCTCCGCCGACAGGGACTCGCTCTCCTA-CGCCCGCACGCCGGAG
GAGCTGCTCAGCATCCTGTACCTCACCGGCGACGAGCACGTGCCCGGTGGCTTCTTCCCGGAGGGCGCGAACGGGAAGAT
AGCACGGGAGTTTCTTCGCAAGCCGTTTGCAGCTGGGGATAACAAGGCGCCAGCAAATTAAGTAGGCCC------GCATG
AGTGATTGCAGCGTCAATCATCGGCCTGAATGAATAATAATGTAAATAGTGTGTGGATGGCATGCTCGATGGAATAAGAT
GGACAGTGTTTGTGCGGCTTCTGAGGTCTTAGAAATTGAAGCG---TTGCGCAGGC--------------TGCACATTAT
-TTGTTCGAAACTGAATTGCAAAACAGAAGCCGGAGCGTAAGAAATTGGCTTAAACCTCTACGAATTTGCGGCAGAACG-
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---------------------------------------------TACATTCATATGTTATGGATTTTGCTAAGTACATG
TTTT------------------GCAAGATCAGGAAGTCTGGAGAATTTAATCGAGGAGTTGATACTCATGAAGAGCTTGT
ATGTTCTACTCATATTATACTAGTACTCCCTCCGTAAAGAAATATTAGAGCGTTTAGATCACTATTTTACTGATCTAAAC
ACTCTTATATTTCTTTACAGAGAGAGTAGTAAAATTAGGGCTGCATCATCGGTATAATTCCTTCCGTTTAGAATCAAAAT
TCTGAATTCAACTAGTAACAGATAACCAAAGCAGAATTTAGGCAATGCCAACATGAAAGGATTACTGAATTTGGAACCTA
GTACTACTTTATGTAG-TGATGATTGCTGATGTAAAGGGAGAAAATCCATTAGAGCTGAACCGTGGGAGGGTGAAAGCGC
GTCACCGGAGGGCAAAATTTTGTGTTTTGACCCTTTTCTGAAACCTATTCGAGATCTGACCCTAGTTTGAAAAAAATTCG
AGATTTGACCATTTTGCTACCGCCAGAGTAAATGGCGGTAGGGTGTAACAGCTTACCGCCAGAGACCTTGGCGGTAGAAA
ACATCCCTACCGCCAAACAGACTGGCGGTAGGCTGTACAACCCTACCGTCAAGGTGCTTGGCGGTAGGCACGAGCACGCA
CTGTGTTCAATACTTAGCAAGATTTTGCGGTAGGGCATGCAACCCTACCGCCAGGGACCTTGGCGGTAGGCTGTTATACC
CTACCGCCATGGACCCTGCCGGTAGCAAAA
>chr7A_1
CATGAAAGGATTGCTGAATTTGGAACCTAGAATGTATAAGCTAACTCTTTATGTTAGTGACGACTGCTGATGTAAAGGGA
GAAAATCCATTAGAGCTGAACCGTGAAAGGGTGAGAGCGCATCATTGGAGTACTATGGAGGTCACGAAGCAGCTGGAAGT
CTGGAAGTGCAAAGGAGCAACTTAATTGTTGGATAGCTTGTTAAAATTTAAGGTAATACATCCATAGCTAGCTCAAAACA
CACACTTTGTGCG-------AAGTAATCTA-----GTAGGTATGGAGCCCTTTCCCCGTGTGTTGCTTGAATTTTCTATC
TTAGTCTTCTGTTCAGATCAAAAATAACTGTCGACATATATGGTGCGCTTCCTTTTTTTTCTTGTTTGTAACAATTATTT
TTGGCTGATTCTCTGTCAAAATTTGAGAAGTGTAAATATGAGTTATCGTGAAAATTTTGGACGATGTCCTGCAACTTTAA
CAC-TTCCTTTTTGTGGTTGGTGCAATGTTCATATAGTTCTAAA------------------------------------
---CTGCTACCATTCAAAGCAATCAAGTACAGATGAATGCATAGCAGAGGACACAACCTACCCCAATTTGCTTGGGACAA
AAAGGCTTTGTTGTTGTTGTATTTTCTCTCCCTTCAACTTTAAGCAGGGTGGAAGATCTGAGCTCTCAGCACTGGCTCAC
CAATGGTAAAACAATCAGATACAAAACCGCTGAACCAGGCGACCTCTCCCTTTACCGACCCGTCTCACCAATGCATCCCT
TCATGACTAGATGGGTAGACACGCTTCACCATTTGCAGTAACACATATTTCAGAATTGAGATTGCAGTATACATAATTAG
TGTATAATCTAGTAGGAAAGAAAGAGTCATAAAGTGAAAGTATATCCTTATATGTGTATGAAAAACAGGAAAAGCTTTTA
CATATTTTCTCGGTTCCAGGAAACAATCATGTGTGTTTATGCGCAGATGGCCCTGCAACCACTTAACCTGGTAATTCATA
TTCACCATGTGCCATGTGCAAGTTGT-------TCAGCATCCAAGAGAGTAACTTTAGCTTGCTTCTCTTTTCAGCAAGA
GCTCAAGGATCCGTATCTACCTGCTGAATTAGGTACTGCAAACAAACAGCCAACGAATTATTTTTGCAAATCGTTAACTG
CAAGTGACACAAGCTC----------------------------GCAGCTGAGAAAGTGTTTCCTCTGGTGGTCTGTGCT
GCTTCTCTACGCTTTCCAGATTGAATTTTGAGTTTACTTGGTTTCATGGAGTGAACCGAATCATCAACTCTTCTTCTAAC
TTGCCTATAACTTCTTTTTTGTAGGATTTCACTATGCAACCTC----CAGCACAGGAGTTGCCTGCAAAAGATCTTCATG
GCAATGAGTAGAAATTCATTAGAGCTGACGGTGGAGGGGATGTTGCGTGCTAAGAGATGATCACCTGGAGCACCCCATCT
CTTTCATTTCTTCATCCCACTGTCATCCAAGTCG--------------------------CCTATTTTAAGCACGCCTGC
AGCTTGAGTGGCGGTGATTAATTTAGACTTGGAGGTGTGAGATAATTAAGCTCGCTTTCGCTAACCGCTCCCTTCTACCA
CCTCGCAAGACCACTCTAAAGCAAGATGAACCGTACAAGCATTTGCTCTTCCCCAATGG-AAAAAAGGAAATGTGGCAGT
TTAGGCACCGCCTCA----------------------------------------------------------GCTCGAA
GCTTAACCACAATATAAAATCAGCTGGTCAGTATTATGCCATGCGTGATTTATTCCGGTCAATGAGGGTAGCTGGTGCAT
GTGGTTGCAATTACAGACGTGGTTACCTGAAGATTTCCAACAAAGGAAAGGCGTTCCCCATGGGAAACTACGAACAGGGA
AAGGCTTGAATTCTCTGGACACCCTGACAACAACCACAATAACTGCCGTGTATCAACATGTCA-CATCAGTGAAG-AAAT
TTTGACGGAGTGACCCACAGATACTCACCTCTCACCCTGAAATAGCATCTGTGGCCTGGAGTTTTCCAGGGTTTCTCTGA
ATTTGGAAGTTA-CACTTGGCAGATTTCCATGG------GTGGCACAGATATAGGCTGAAGAAAATTGAGA-CGATGC--
----ACCATTGCAATCTAAATTGAAGTGAAGCACCTGAACTGGCTCTGAAGAAAGGTGATCTGTCTGCGAGCCTCACTTC
TTGGCTTCTACAAGTAATCTATTTCCAGATACCTCCAAGCGTCAGCGATCTAA-----ATTTCTCGCAGACAACG-TCAC
CTCGCTGAAGGAGGTAAGCTCAGGCAGCAATCACCGCCAGAGAACGTTAGTTAGCGGATTGC---------TTCAGAAGG
GCAGCTTCCAGATTGTTGGCTATGCTACGCTGATCCGCTATAAGTTCAGCAGAGATGACACCATGCACCTTCAGTCCAGC
GTCCTCGGAT-----GCTTAAACATTTTGTGAA--------------GATGGCAACGGCATCATCTCACACCTACG----
-----CCCCTCTCCTGCTCTTGTTCCTCCTG------------GCCTGTTCATGCAGGGCATCATCCGGCCATGCGGT--
-------------CGACCCTACCTGCCCTCCAGCCAAGGCGTCAGCGGTGGCGGTGGAAATCTCGGACTGCGGCGGACCT
CGGTGCCAGCCACCGGCTCCGCACGTTCCGGTCCCGGTGTTCCCGTACGACATCGACCCGATGCAGTTCGCGCTGAACCT
GGAGTACACCGAGGCCGAGTTCTTCCTCCACGCAGCGTTCGGTGTAGGGCTCGACCAGATCGCGCCGAACCTGACGTTGG
GAGGGCCGCCTCCGG-----------------------------------------------------------------
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---------------------------------TGGGCGCCATGAAGGCCAACCTTGACGAGGTGACATGGCGCATCACC
GCGGAGTTTGGCCTTCAAGAAGTCGGCCACATCAGGTGTGTGCAAGATCCATTCAACGAATTGCTCCCCTTCACCATTTC
GAATTGCAACACACTTGGAC-----------------------TGGATAGAAGCAAGTTGGTGCTGAAAATCCATGTGCT
TCCGGTTTATTTTCGTTGCAGGGCTATCCAGAACACAGTTGGTGGGTTCCCTAGGCCGAAGATAGACCTGAGCGCCAGCA
ACTTTGCAAGGGTGATGGACCAAGCATTTGGTTACCATTTGGATCCTCCTTTCGACCCCTATATGGACAGCCGCAACTTC
CTGATGGCGTGCTACGTGATCCCCTACCTGGGCATCAACGGCTACACCGGCACCAACCCCATCATCGACGGCTACGCGAC
TAAACACGTAAC------C-AAATCCACCATCCAACATCGTGTCCATGCATATGGACATTGAAACCTGCAAGTTACACAC
AAGTTGAGTTGATGCCACTGTATCTGTTGCAGCTTCTTGCAGGGTTGCTAGGCGTGGAGGCGGGGCAGGACGCGGTCTTC
CGCGCGCTGCTCTTCGAGCGGAGGAGCGAGACGGTGCCGCCCTACAAGGGGATCACGGTGGCGGAGTTCACCGACCGCAT
CTCCGCGGCGAGGAACCAGCTGGCGAAGTGCGGGGTGAAGGACGAGGGGCTCACCGTGCCGCCCGAGCTTGGCGCGGAGG
GGAGGATCTGCAC--------------CAACGTGCTCTCCGCCGACAGGGACTCGCTCTCCTA-CGCCCGCACGCCGGCG
GAGCTGCTCCGCATCCTGTACCTCTCCGGCGACGAGCACGTGCCCGGCGGCTTCTTCCCGGAGGGCGCGAACGGGAAGAT
AGCACGGGAGTTTCTTCGCAAGCCGTTTGCAGCTGGGGGTAACAGGGTGCCAGCAAATTAAGTAGGCCC------GTATG
AGTGATTGCAGCGTCAATCATCGGCCTGAATGAATAATAATGTAAATAGTGTGTGGATGGCATGCTTGATGGAATAAGAT
GGACGATGTTTGTGCGGCATCTGAGGCCTTAGAAATTGAACCCGCATTGCGCAGGC--------------TGCACAATGT
GTTGTACGGAATTGAATGGCAAAACAGAAGTTGCAGTGTAAGAAATCGACTTACACGTCTACGAATTTGCGGCAGAACG-
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---------------------------------------------TACATTTATATGCTACGGATTTTGCTCGAGTACAT
GCTTTGCA--AAACTAAGAATAGCAAGATCAGGAAGTCTGGACAGTTTGATCGAC-AGTTGATACTCATGAAGAGCTTGC
ATGTTCTGCGTACATTG---TACTACTCCCTCCGTCCGTA----------------------------------------
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>chr7D_1
ACTCT-------------------------------------------TTATGTTAGTGAGGACTGCTGATGTAAAGGGA
GAAAATCCATTAGAGCTGAACCGTGAAAGGGTGAAAGCGCATCATTGGAGCACTATGGAGGTCACGGAGCAGCTGGAAGT
CTGGAAGTGCAAAGGAGCAACTTAGTTGTTGCATAGCTTGTTGAAATTTAAGGTAATACATCCATAGCTAGCTCAAAACA
CACACTTTGTAGTTTGTACCAAGTAATCTACAGTTGTTGGTAGGGAGGCCTTTCCCCATGTGTTGCTTGAATTTTCTATC
TCAGTCTTCTGTTCAG---------------------------------TCCTCTATTTTCTTGTTTGTAACAATTA-TT
TTGGCTGATTCTCTGTCAAAATTTGAGAATTGTAAATATGAGTTATCGTGAAAATTTTGGACGACGTCCTGTAACTTTTA
ACATTTCCTTTTTGTGGTTGGTGCAATGTTCAAATAGTTCTAAACTGATCATCTTAAATCAAACAGGGGCTGGTACTGAT
CACCTGCTACCATTCAAACCAATCAAGTACAGATGAATGCATAACAGAGGACACAACCTACCCCAATTTGCTTGGGACAA
AAAGGCTTTGTTGTTGTTGCATTTCCTCTCCCTGCAATTTTAAGTGGGGTGAAAGATCTGAGCTCTCAGCGTTGGCTCAC
CAATGGTAAAACAATCAGGTAGAAAACCGCTGAAACAGACGAGCTCTCCCTTGACCGACCCATCTCACCCAGCTATTCCT
TCATGACTAGATGGGTAGACGTGCTTCACCATCTGCAGTAACATATATTCAGTG---------------TACATAATTAG
TTTATAATCTAGTAGGAAAGAAAGAGTCATAAAGTGAAAGTATATCCTTATATGTGTGTGAAAAACAGGAAAAGCTTTTA
CAAATTTTCTCGGTTCCAGGAAACAATCATGTGTGTTTATGCGCAGATGGCCCTGCAACCACTTAACCCGGTAATTCATA
TTCACCATGTGCCATGTGAAAGTTGTTTTTAACTCAGCATCCAAGAGAGTAACTTTAGCTTGCTTCTCTTTTCAGCAAGA
GCTCAAGGATCCGTATCTACCTGCTGAATTAGGTACTGCAAACAAACAGCCAACGAATTATTTTTGCAAAACATTAACTG
CAAGTGACACAGGCACGCGTGGTGGATTCTCTGTTCCCCGCCGTGCAGCTGAGAAAATGTTTCCTCCGCTGGTCTCTGCT
GCTTCTCTGCGCTTTCCAGCTTGAATTTTGAATTTACTTGGTTTCATGGAGTGAACCGAATCATCAACACTTCTTGTAAC
TTGCCTATAACATTTTTTTTGTAGGATTTCACTAGAAGGCGTGGTTACAGCACAGGAGTTGTTTGCACAAGATCTTCATG
GCAACGGGTAGAAACTCATTAGAGCTGACAATGGAGGGGATGTTGCATGGCAAGAGATGATCACCTGGAGCACCCCATCT
CTTTCACTTCTTCACCCCCCTGTCATCCAAGTCGGCTATCATGATTCTAGGGGCTTTGAGCCTATTTTCAGCACGCGTGC
AGTTTGACTGACGGTGATTAATTTAAACTTGGAGGTGTGAGATAATTAAGCTCGGCTTTGCTAACCGCTCCCTTCTACCA
CCTCGCAAGACCATTCGAAAGCAAGATGAACCGTACAAGCATTTGCTTTTCCTCAATGGAAAAAAAGGAAAGGTGGCAGT
TTAGGCACCTCCTCA----------------------------------------------------------GCTCGAA
GCTTAACCACAATATAAAATCAGCTGGTCAGTGTTATGTCATGCGTGATTTATTCCAGTCAGGAAGGGTAGCTGGTGCAT
GTGGTTGCAGTTACTGACATGGTTACCTGAAGATTTCCAACAAAGGAAAGGCGTTCTCCATGGGAAACTACGAACAAGGA
AAGGCTTGAATTCTCTGGACACCCTGACAACAACCACAATAACTGCCGTGTATAAACATGTCA-CATCAGTGAAG-AAAT
TTTGACGGAGTGACCCGCAGGTACTCACCTCTCACCTAGAAATAGCATCTGTGGCCTGGAATTTTCCAGGGTTTCTCTGG
ATTTGGAAGTTA-CACTTGGCAGATTTCCATGG------GTGGTACAGATATAGGCTGAAGAAAATTGAGA-CGATGC--
----ACCATTGCAATCCAAATTGAAGTGAAGCACCTGAACTGACTCTGAAGAAAG-TGATCTGTCTGCGAGTCTCACTTC
TTGGCTTCAACAAGTAATCTATTTCCAGATACCTCCAAGCGTCAGCGATCTA-----GATTTCTCGCACACAACG-TCAC
CTCGCTGAAGGAGGTAAACTCAGGCAACAATCACAGCCAAAGAACGTTAGTTAGCTGATTGC---------TTCAGAAGG
GCAGCTTCCAGATTGTTGGACATGCTACGCTGATCCGCTATAAGTTCAGCAGAGATGACACCATGCACCTTCAGTCCAGC
ATCCTCGGAT-----GCTTAAACCTTTTGTGAA--------------GATGGCAACGGCATCATCTCACACCTACT----
-----CCCCTCTCCTGCTCTTGTTCCTCCTG------------GCCTGTTCATGCAGGGCATCATCCGGCCATGCGGT--
-------------CGACCCTGCCTGCCCTCCGGCCAAGGCGTCGGCGCTGGCAGTGGAAACCTCGGACTGCGGCGGACCT
CGGTGCCAGGCACCGGCTCCGCACGTCCCGGTCCCGGTGTTCCCGTACGACGTCGACCCGATGCAGTTCGCGCTGAACCT
GGAGTACACCGAGGCCGAGTTCTTCCTCCACGCAGCGTTCGGTGTAGGGCTTGACCAGATCGCCCCGAACCTGACGTTGG
GAGGGCCGCCTCCGG-----------------------------------------------------------------
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---------------------------------TGGGCGCCATGAAGGCCAACCTCGACGAGGTGACATGGCGCATCGCC
GTGGAGTTTGGCCTTCAAGAAGTCGGCCACGTGAGGTGTGTAAAAGATGGCACTCAA------CTCGCCTTCACCATTTT
GAATTGCGCTTC------------------------ATACACTTGGATAGAAGCAAGTTGGTAATGAAAATCCATGT-CT
TGCGGTTTGTTTTCATTGTAGGGCTATCCAGAACACAGTTGGTGGGATTCCTAGGCCAAAGATAGACCTGAGCGCCAACA
ACTTTGCAAGGGTGATGGACCAAGCATTTGGTTACCATCTGGACCCTCCTTTCGACCCCTACATCGACAGCCGCAACTTC
CTGCTGGCGTGCTACGTGATCCCCTACCTGGGCATCAACGGCTACACCGGCACCAACCCCATCATCGACGGCTACGAGAC
TAAACACGTAAC------CAAAGTCCACCATCCAACATCGTGTCCATGCACATGCACATTGAAACCTGCAAGTTACACAC
AAGTTGAGTTGAGGCCACTGTATCTGCTGCAGCTTCTTGCAGGGTTGCTAGGCGTGGAGGCGGGGCAGGACGCCGTCTTC
CGCGCGCTGCTCTTCGAGTGCAAGAGCGAGACGGTGCCGCCCTACAAGGGGATCACGGTGGCGGAGTTCACCGACCGCAT
CTCCACAGCGAGGAACCAGCTGGGGAAGTGCGGGGTGAAGGACGAGGGGCTCACCGTGCCGCCCGAGCTTGGCGCGGAGG
GGAGGATCTGCAC--------------CAACGTGCTCTCCGCCGACAGGGACTCGCTCTCCTA-CGCACGCACGCCGGCG
GAGCTGCTCAGAATCCTGTACCTCACCGGCGACGAGCACGTGCCCGGCGGCTTCTTCCCGGAGGGCGCAAACGGGAAGAT
AGCACGGGAGTTTCTTCGCAAGCCGTTTGCAGCTGAGGGTAACAAGACGCCAGCAAATTAAGTAGGCCC------GTATG
AGTGATTGCAGCGTCAATCATCGGCCTGGATGAATAATAATGTAAATAGTGTGTGGATGGCATGCTCGATGGAATAAGAT
GGACAGTGTTTGTGCGGCTTCTGAGGTTGTCGAAATTGAACCG---TTGCGCAGGC--------------TGCACAATGT
-TTGTACGAAATTGAATGGCAAAACAGAAGTTGCAGTGTAAGAAATTGGCTTAAACGTCCATGAATTTGCGGCAGAACG-
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---------------------------------------------TACATTTATTTGCTATGGGTTTTACTCGACTACAT
GCTTTTTTGCAAACTAAGAATAGCAAGATCAGGAAGTCTGGACAGTTTGATCGAC-AGTTGATACTCATGAAGAGCTTGC
ATGTTCTACTCATATTGTACTA----------------------------------------------------------
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>chr4D_659
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---------------------------------------GTGATGCGGAGATAGGCTCAAGAAAATTGAGA-CGATACTT
TGGGACCATGGCAATCCAATTTGAAGTGAAGCAGCTGGACTCTGTAG-----AAAGTGA---------------------
-------------------TATTTCCGGATACCTCCAAGCATCAACCATCTACTCCAGATTTCTCACGCACAATGTTTAC
CTTGCAGCAGGAGGTAACCTC-GGCAACAATCACGGTCAAAGAAGGGTGGTTAGCTGCTTGTTTGTTTCAATTCAGAAGG
GCAGCTTCCAGATTGTTGGACGTGCTA-------------TAAATTTAGCA---ATGACACCATATACCTTC--------
-----------------------CTCGAGTTAGCTAACTAGTACTAGGATGGCAATGGCATCATCTCGCACCTACACAGT
GACTCCTCTCCTGCTGCTCCTGTTCCTCCTAGTCCTAGCCTTAGCCTGTTCATGCAGGGCATCATCCGGCCATGCGGT--
-------------C---------TGCCCTCCAGCCAAGGCGTCAGCGGCGGCAGTGCAGGCCT-----------------
CATTGCCAGCCACCGGCTCCGCACGTTCCGGTCCCGGTGTTCCCGTACGACGTCGACCCGATGCAGTTCGCGCTGAACCT
CGAGTACACCGAGGCCGACTTCTTCCTCCACGCGGCGTTCGGCG------------------------------------
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---------TTGATTATTATTATTACGTTGATGAAAATCCACTTAGATGGAAGCAAGTTGGTACTTTAAATCCATATGAC
GCCC-TTCATTTTGGTTGCAGGGCCATCCAGAACACGGTGGGTGGGTTCCCTAGGCCAAAGATCGACCTGAGCGCCAACA
ACTTTGC---------------------------------------------------------------CCTCAACTT-
----------------------------------------------------CCAACCCCATCATCGACGGCTACCAGAC
TAAACATGTAATCAAATTC-AAATCGACCATCCAACATCGTATCCATGCACATCGGCACCATTCATAGTTGGTAACAAG-
----------GACGCCATTGTATTTGTTGCAACTACTTGCAGGGTTGCTAGGCGTGGAGGCGGGGCAGGACGCCGTCTTC
CGCGCGCTGCTCTTCGAGCGTAAGCACGAGACGGTGCCACCCTACAAGGGGATCACCGTGGCAGAGTTCTCCG-------
-----CCACGAGAAACCAGCTGGGGAAGTGCGGGGTCAAGGACAAGGGGCTCACTGTGCCGCCCGAGCTCGGCCCAGAGG
GCAAGATCTGCAC--------------CAACGTGCTCTCCGCCGACAGGGACTCCCTC--CTA-CGCCCGGACACCGGCC
GAGTTGCTCAGGATCCTCTACCTCACCGGCAACGAGCATATCGCTGGTGGCTTCTACCCGGAAGGAGCAAACGGCAAGAT
AGCACCAGAGTTTCTTAGCAAGCAGTTTACAGC-----------------------------------------------
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>chr7B_867
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-------------------------AACTATCACAGTCAAAGAACGTTAGTTAGCTGATTGC---------TTCAGAAGG
GCAGCTTCCAGATTGTTGGATATGCTACGCTGATTCGCTATAAGTTCAGCAAAGATGACACCATGCACCTTCAGTCCAGC
ATCCTCGGAT-----GCTTGAACCTTTTGTGAA--------------GATGGCAACGGCATCATCTCACACCTACG----
-----CTCCTTTCCTGCTCTTGTTCCTCCTG------------GCCTGTTCATGCAGGGCACCA-CCGTCCATGCGGTCG
ACCCG---CCTACC---------TGCCCTCCGGCCAAGGCGTCAGCGGTGGCAGTGGAAACCTCGGACTGCGGCGGGCCT
CGGTGCCAGCCACCGGCTCCGCACGTTCCGGTCCCGGTGTTCCCGTATGACGTCGACCCGATGCAGTTCGCGCTGAACCT
GGAGTACACCGAGGCTGAGTTCTTCCTCCATGGAGCGTTCGGTGTAGGGCTCGACCAGATCGCGCCCAACCTGACGTTGG
GAGGGCCGCCTCCGA-----------------------------------------------------------------
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---------------------------------TGGGCGCCATGAAAGCCAACCTCGACGAGGTGACATGGCGCATCGTC
GCGGAGTTTGGCCTTCAAGAAGTCGGCCACATCAGGTGCGTAAAAGATCCATTCAACGA-TTGCTCCCCTTCACCATTTC
AAATTGCAACACACTTGGA-----------------------TTGGATAGAAGCAAGTTGGTACTGAAAATCCATATGCT
TCCGGTTTATTCTCGTTGCAGGGCTATCCAGAACACAGTTGGTGGGTTCCCTAGGCCAAAGATAGACCTGAGCGCCAGCA
ACTTTGCAAGGGTGATGGACCAAGCATTTGGTTACCATTTGGACCCTCCTTTCGACCCCTACATCGACAGCCCCAACTTC
CTGCTGGCGTGCTACGTGATCCCCTACCTGGGCATCAACGGCTACACCGGCACCAACCCCATCATCGACGGCTACGAGAC
TAAACACGTAAC------C-AAATCCACCATCCAACATCGTCTCCATGCACATGGGCATTGAAACCTGCAAGTTACACAC
AAGTTGAGTTGATGCCACTGTATCTGCTGCAGCTTCTTGCAGGGTTGCTAGGCGTGGAGGCGGGGCAGGACGCGGTCTTC
CGCGCGCTGCTCTTCGAGCGCAAGAGCGAGACGGTGCCGCCCTACAAGGGGATCACGGTGGCAGAGTTCACCGACCGCAT
CTCCGCGGCGAGAAACCAGCTGGGGAAATGCGGGGTGAAGGACGAGGGGCTCACCGTGCCGCCCGAGCTTGGCGCAGAGG
GCAGGATCTGCAC--------------CAACGTGCTCTCCGCCGACAGGGACTCGCTCTCCTA-CGCCCGCACGCCGGAG
GAGCTGCTCAGCATCCTGTACCTCACCGGCGACGAGCACGTGCCCGGTGGCTTCTTCCCGGAGGGCGCGAACGGGAAGAT
AGCACGGGAGTTTCTTCGCAAGCCGTTTGCAGCTGGGGATAACAAGGCGCCAGCAAATTAAGTAGGCCC------GCATG
AGTGATTGCAGCGTCAATCATCGGCCTGAATGAATAATAATGTAAATAGTGTGTGGATGGCATGCTCGATGGAATAAGAT
GGACAATGTTTGCGCGGCTTCTGAGGTCTTGGAAATTGAACTG---TTGCGCAGGCCGCAGGCCGCAGGCTGCACAATGT
-TTGTACGAAATTGAATGGCAAAACAGAAGTTGCGGCGTAAGAAATTGGCTTAAACCTCTACGAATTTGCGGCAGAACGT
ACATTCATTTTTTTTCGACAAAGGGTGTTCTTTATTGACTCAAGATATAGCATCGAGGGATACAATTATAGTGAGTACAC
ACCCGGCCTCTGCATATCAAAGATGCACACAGCCAACACTAACACACGCACACAAAGTACCACGCCGGCAAATAGCAAAG
TCATTAAAGACCGAAGCTATGCATAGGCGGAGACAAAAGAAGGAAAAAAATCCCGTAAGCAATGAAAACAACGATTGATG
ACATACACCAATGACCGTCCGCACCAACCATCTCTTGATAGCATGATAACTACGATGAAGATTCTCCAAAAGCGATGCCT
TCGGGAAGAGAACGACGCGCAAGCGCCGCCGTTGTCTGATCCAACCACAGAGGTTAGACCGTGGGTTTTCACCCTGAAGA
TCAAGTCCGAGTAAACTCCAAACAATGTCTTCATCAAGGTAACGACGCGAAGAACGTCGCCATTGTCTGGTATAACCAAG
GGTCAGACCTATGGTTTTCACCATGGAGCTCGAGACCATCCAATCGAAGTCATTATATGTTGTCTCCTCCACTTGCCTCG
ATCCCAGCAGCTGCATACGCCCATGGTCTTGATGACGTGTTGAGGAGCCATGGTGAGAGCTGGTCGCGATAACATGACAA
AGTATTTGACGGAGAGGAAGGACATCGGCACGGCCAAAATCCCGACTCCGGGACGCTTCGAAGACCGTGTACCGTCCTCA
CAAGTAGCAGTCGATGGTTGATCTGCATCAGATAACACCACCGCCCACTGCTACTAGCTCTGTCGTCCTCATCGCAAAGC
ATATGTGACGCAGGAAATTGTCGTTGTCGCCGAATCAAAAGGTCGATGCCGCAGGCCACGCTGTCTAGCCGCTGCCACAA
CCACTTGGGTCTAAGGCAGTGCCATACACAGCATACGGCAAGATCCATGGCGCCTCCAGCCTTGAGTCGAAGCGGAAGAC
CACCATGGCCGCCACCTCCCGACGGGCAGCTTGGGCGACGGTTGCGACCTGCAGGCTGGCCACCGCCTAAACCCGCTGCA
CCCTTGCGTTGGCACTATACCTGGCCATGGAAAGCCCGGCCCGGCCGGCCCGGCCCGAAAAAGCCCGACCCGGCCCGGCC
CGACGTTGCCCCCAGGTCGGGCTCGGGCCTAGATTTTGAGCTCGAAGACCGGGCCCGGGCCCGTTGTTTTTGCGCTTTCC
TGAAGGTCGGGTCGGGCCGGCCCGAAGCCCGACGGGCTTTTAGTTGTTCGGGCCGGGCTCGGGCCCAAAAAACAGGCCCG
TTGGTCGGGCCGGGCCGGGCCCGGGCCTGGGTTTTTTGCGTCGGGCTTGGCTAGGCCCGGCCCGAGGTATGGCCAGGTAT
AGTTGGCACCCCAAGATCTCGTCTTCATGGCGGCTGTATCTCCCGCATCTCTCTCGCGTGATGCACCTGCGCCTTCAAGG
AAGGGACGCGGAAAACCTCCGAGGCCGCCGCCCAATCCCGATCCGGCGCCGTCGCTGCAAGCTCCACCTTCACGGCATCT
GATCGCTGCTCATACGCCACCAAAGCACTGCCTAAACGCCACAGGAACGAGGCCCCGCCGCCGCCGTCGGCCGCGCAGGC
AAGCCCGGCGGCGCCGACAGGCGGCGGCGAGGAGAGGGCGCCCGGAGAGCGCGGCCGGAAAAAGGGGATCAGGATCCGCC
CGAGCAGCCCAGAGGATGACGCGGGGGCAGTTGCGGTTTGTATTTTACATTCATATGCTATCGATTTTACTCGAGCACAT
GCTTTA---CAAACTAAGAATAGC----------------------------------------------------TTGT
ATGTTCACT-----------------------------------------------------------------------
------------------------AGTAGTAAAAGTAGGGCTCCATCATCGGTATAATTCCTTCCATTTAGAATCAAAAT
TCTGAATTAAACTAGCAACAGATAACCAAAGCAGAATTTACGCAAGGCCAGCATGAAAGGATTACTGAATTTGGAACCTG
CTACTTTATGTTAGTGATGATGATTGCTGATGTAAAGGGAGAAAATCCATTAGAGCTGAACCTTGGAAGGGTGAAAGCGC
GTCACTGGAG----------------------------------------------------------------------
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>chr4A_950
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-------------------------------------CTATAAATTTAGCAGAGATGTCACCATACACCTTCAGCCCAGC
ATCCTCGGATCGGATGCTTAAACCTCGAGTTAGCTAACTAG------GATGACAATGGCATCATC---------------
------TCCTCTCCTGCTCCTGTTCCTCCTAGTCCTAGCCTTAGCATGTACATGCAGGGCATCATCCGGCCATGCGGTCG
AGGTCGACCCTACC---------TGCCCTCCAGCCAAGGCGTCAGCGGTGGCAGTGCAGGCCTCGGACTACGGCGGGCCT
CATTGCCAGCCACCGGCTCCGCACGTTCCGGTCCCGGTGTTCCTGTACGACGTCAACCCGATGCAGTTCACGCTGAACCT
TGAGTACACCGAGGCCGAGTTCTTCCTCCACGCGGCGTTCGGCAAAGGGCTTGACTAGATCTCGCCCAACCTGACATTGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCGCCATGAAAGCCAACCTCGACGAGGCGACATGGCGCATCGCC
GCGGAGTTTGGTCTTTAAGAGGTCGGACACCTGAGGTCTG---------CATGCAACGA-TCACATCATTTTTACCGTTA
TTACTCTACTTGATTATTACGT---------TGAAAATCCACTTAGATGGAAGCAAGTTGGTACTGAAAATCCATATGTT
GCCC-TTCATTTTGGTCACAGGGCCATCCAGAACACAGTGGGTGGGTTCCTTAGGCCAAAGATCGACCTGAGTGCCAACA
ACTTTGCAAGGGTCATGGACCAAGCATTTGGTTACCATTTGAACCCTCCTTTCGACCCCTACATCCACAGCCTCAACTTC
CTGCTGGCGTCCTACGTCATCCACTACCTGGGCATCAACGGCTACACCGGCACCAACCCC--CATCGACGGCTACCAGAC
TAAACACGTAAC------C-AAATCAACCATCCAACAACGCATCCATGCACATCGACACTACTCGTAGTAACCATTGTAC
TAT-----------------TATTTGTTGCAGTTTCTTGCAGGGTTGCTAGGCGTGGAGGTGGGACAGGACGCCGTCTTC
CACGCGCTGCTCTTCGAACGCAAGCACGAGACGGTGCCACCCTACAAGGGGATCACCGTGGCAGAGTTCACCGATCGCGT
CTCCACCACGAGAAACCAGCTGGTGAA-----GGGTGAAGGACGAGGGGCTCACCGTGACGCCCGAGATGCAAAATAAAA
AAGTGAAGTAAGGGTGCCCTGTGGGCACAACTTGCTCTCCGCCGACAGGGACTCCCTCTCCTAGCCGCCGGACGCCGGCC
GAGTTGCTCAGGA---------TCACCGGCAACGAGCATATCCCTGGTGGCTTCTAGCCGGAAGGAGCAAACGGTAAGAT
AGCACGAGAGTTCCTTCGCAAGCCGTTTACAGCTTGTGATAACAATGTGACAGCAAATTAACTAAGCCCGTATCTGTATG
AATGACTGCAGCATCAATCGTCAGCCAGAA--------------------------------------------------
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>SNPs
SSS-----------------------------------------------------------------------------
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---S------S--S---------------------------------------------------------------S--
------------------------------S-------------S---------------S-----------------S-
---------------S------------------------------S---------------------------------
----S---S---S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-------------------------------S------------------S-----------------------SSS---
---------------------------------------S-------------------------------S-S------
--------------------------------------S-------S-----------SSSSSS-----------S----
----S--S--------------S----SS---S--------------------S----S-SSS-------------S---
-----------SS-----S----S---------SSSSSS-----------------------------S--S--------
--------------------------------------------S------------------------------S----
--------S-----------------------------------------S-----------------------------
S---------------------S---------------------------------------------------------
-S------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
----------------------------------------------------------------S---------------
---------------------------------------------------------------S----------------
--------------------S--S--------------------------------------------------------
-----------------------------------S--------------------------------------S-----
-------S------------------------------------------------------------------------
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----------------------------------------------------------S---------------------
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---------------------------------------------------S----------------------------
-------------------------------------------------S------------------------------
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---------------------------------------------------S-----------------------S----
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----------------------------------------S-----------------------------------S-S-
-----S-----S-----S------------SS-S----------------------------------------------
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---------------------------------------------------------S-------------SSSSSSSSS
SS----------------------------------------S-S---S-----SS------------------------
----------------S-----S------------SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----------S-------S----------------------S--------------
--------S------S------------------------S----S----S----------------------------S
S----SSS-SS-SSS-----------------------------------------------S---S-------------
-----S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2109
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---------GTGACCCGCAGATGCTCATA---------------------------------------------------
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>reverse_4511
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------------------------------CCGGAGCGTAAGAAATTGGC------------------------------
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------------------------------
