>input_sequence_55202
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----------------------------------------------------------------------ATGGAGGTCC
AGATGAGACGGGGCGGCGCGACGCACCTGGTCCAGGCGGCGGCGGTGGTGGTCTCCTACGTGGTGCTGATGGCGT-----
-CGGCGGGGGTGCGCGCGCAGCTGCGGGTGGGGTTCTACGACAGCTCGTGCCCGGCCGCGGAGATCATCGTGCAGCAGGA
GGTGAGCAAGGCGGTGTCCGCCAACCCGGGCCTCGCCGCGGGCCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCGGCG
GCTGCGAGGCGTCGGTGCTGGTCGACTCCACCAAGGGCAACACGGCGGAGAAGGACGCCGGGCCCAACACGAGCCTGCGC
GGGTTCGAGGTCATCGACCGGATCAAGGCGCGGGTGGAGCAGGCGTGCTTCGGCGTCGTCTCCTGCGCCGACATCCTCGC
CTTCGCTGCCAGGGACAGCGTTGCGCTGGTACGTGC---AAAGCAAATCCATGCATCATTAGCCCCGGCTTTAATC----
---CTGCATTTTGTGGTTAATTAATATATA-----TATAAACTGTCACTTTAGGAAACCACACAGCACATGATCATATGG
GTTTATCAGAATCTCAGTACGTAAAGCTTATTTGATCCGCCATCTGTGTCCCCCTACCTTTCTCCTTTTCTCTCTGTGCA
CCACATGGACATGACGCTACTAGCTGCACCTGCATGCGCACACGATGCC----GTTGTTTAGTCTGTCAATCGTTGCTGA
TGGTGACTGTGTGCGCGCACGCAGACTGGCGGGAACGCGTACCAGGTGCCGGCGGGGCGGAGGGACGGGGGCGTGTCGCG
GGCGCAGGACACGGGCGGCAACCTGCCGCCCCCGACCCCCAACGTGAACCAGCTCACCAAGATCTTCGCCTCCAAGGGGC
TCAACCAGAAGGACCTGGTCACCCTGTCCGGCGCGCACACCATCGGCGGCTCGCACTGCAGCTCCTTCAGCAGCCGCTTG
CAGACGCCGTCCCCGACGGCGCAGGACCCGACCATGGACCCCGGCTACGTGGCGCAACTGGCGCAGCAGTGCGGCGCGTC
CGCCTCGCCGGGGCAGCTGGTGCCCATGGACGCCGTCACCCCCAACTCCTTCGACGAAGGGTTCTACAAAGGCATCATGT
CCAACCGGGGCCTGCTCGCCTCCGACCAGGCGCTGCTCAGCGACGGGAACACCGCCGTGCAGGTGGTCTCCTACGCCAAC
GACCCGGCCACCTTCCAGAGCGACTTCGCCGCTGCCATGGTCAAGATGGGTTACATCGGCGCGCTCACCGGCAGCAGCGG
CAAGATCAGGGCCAACTGCAGAGTCGTATGA-------------------------------------------------
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>chr1B_1_TraesCS1B01G214900
AGCTTTTCTTTTAATTCCATGGTTAAGCTTGAAGAAATACGCACAATCATTCGCGCCCTGCTGGATTCGTTTCGTTCTAG
CTGTGCCGCATTTGCTATT-CTGCATGCATCTCTACACTGACTA-----GATGGAGCTTGTCTGTCAGGAATCGGGATTT
GCTAGCATTGC------ATGCCGTGTGTATCCGATGCCTG---CCCTTTTAGGCCTTTGCTACATGCAGAAAAAAA-AAG
GACACAGCAGCATCTAAAATCTATAATAGAGTAAAGGTACTAATTGGACCATTCCGGTTATATAGTTAAAATTGAGCAAT
CGGACTCCCC---CAACATGCAACGAGGCCTCAATGATTAAGCTTGGTTTGGTCACAAATATAGTACTACTACGTACTAC
AAATCTCACTTCTGGAGACGAACAAGAATACCAGCTGAGACAGAGCTGAATTACCAGGTGTCAAGGAGACGCAAGTCACA
-TTCAGTCTTGGCAGTAATTAATTAAATCGTCCAAACAACAACGCGAGC-------------------------------
--------AGTA---TCTGCCAACTTTTTTT----TTAGTTCTAGTGTCAGGACATGACAGTTCTTGCATGCACGACGCC
GCCGTAGCATTACAAGATGCAGCAACAATCACCACTTCATCTTCCTCGCAAAAATGGCGTGCATACGCAGCTGTGGGGGA
ATCCACGGCTTGACGTAGTA-------------CTGCATGCAGGTGAAAACACCGGAGTG--------CCGCAGATCTCG
CAGGCTTTCCATTGCCACCAATCATGGCAGAAAAGCCATGGCCTCGCCGCGACCCCACTCTCTCCACCACATATTTCCGC
CACCAACCCTTTTCCCCCTCCGCGCGCACATGCACCGCCAATCGGTCGAGATTCCCCTTAATCCCT-----CCAACGTTT
AACCATAAACCTT-------CTATTTAACACGCTCCACTCATCAGCTCTCCCCTTCCTTAGCAAGGAAGTATAG------
--CTAAGCCAGTGTATAAAGAGGGTGTCAGTGCCACTGCCACCAGAGCGATCGAGTACGTGC---CGGCAATGGAGGTCC
AGATGAGACGGGGCGGCGCGACGCACCTGGTCCAGGCGGCGGCGGTGGTGGTCTCCTACGTGGTGCTGATGGCGT-----
-CGGCGGGGGTGCGCGCGCAGCTGCGGGTGGGGTTCTACGACAGCTCGTGCCCGGCCGCGGAGATCATCGTGCAGCAGGA
GGTGAGCAAGGCGGTGTCCGCCAACCCGGGCCTCGCCGCGGGCCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCGGCG
GCTGCGAGGCGTCGGTGCTGGTCGACTCCACCAAGGGCAACACGGCGGAGAAGGACGCCGGGCCCAACACGAGCCTGCGC
GGGTTCGAGGTCATCGACCGGATCAAGGCGCGGGTGGAGCAGGCGTGCTTCGGCGTCGTCTCCTGCGCCGACATCCTCGC
CTTCGCTGCCAGGGACAGCGTTGCGCTGGTACGTGC---AAAGCAAATCCATGCATCATTAGCCCCGGCTTTAATC----
---CTGCATTTTGTGGTTAATTAATATATA-----TATAAACTGTCACTTTAGGAAACCACACAGCACATGATCATATGG
GTTTATCAGAATCTCAGTACGTAAAGCTTATTTGATCCGCCATCTGTGTCCCCCTACCTTTCTCCTTTTCTCTCTGTGCA
CCACATGGACATGACGCTACTAGCTGCACCTGCATGCGCACACGATGCC----GTTGTTTAGTCTGTCAATCGTTGCTGA
TGGTGACTGTGTGCGCGCACGCAGACTGGCGGGAACGCGTACCAGGTGCCGGCGGGGCGGAGGGACGGGGGCGTGTCGCG
GGCGCAGGACACGGGCGGCAACCTGCCGCCCCCGACCCCCAACGTGAACCAGCTCACCAAGATCTTCGCCTCCAAGGGGC
TCAACCAGAAGGACCTGGTCACCCTGTCCGGCGCGCACACCATCGGCGGCTCGCACTGCAGCTCCTTCAGCAGCCGCTTG
CAGACGCCGTCCCCGACGGCGCAGGACCCGACCATGGACCCCGGCTACGTGGCGCAACTGGCGCAGCAGTGCGGCGCGTC
CGCCTCGCCGGGGCAGCTGGTGCCCATGGACGCCGTCACCCCCAACTCCTTCGACGAAGGGTTCTACAAAGGCATCATGT
CCAACCGGGGCCTGCTCGCCTCCGACCAGGCGCTGCTCAGCGACGGGAACACCGCCGTGCAGGTGGTCTCCTACGCCAAC
GACCCGGCCACCTTCCAGAGCGACTTCGCCGCTGCCATGGTCAAGATGGGTTACATCGGCGCGCTCACCGGCAGCAGCGG
CAAGATCAGGGCCAACTGCAGAGTCGTATGATCGGTCCATCCATGGCGACATGCATCAAGGATCATCTTTCTCATTTAGA
AGAGTGGCGATGGATTAATTTGGATTGGACGTGCACCCGTGCTAGCATTTAGCGTTCTTGTTTGACCATGTACGTA-GTA
CTCCGCCTATTCTTTTGCTCATCGATCGATCTGTATTGATTCTTTCTCGGCTGAGGTGTGTGTGTCTTTTGAGGAAATTG
TAACTAGCTACTACCAGCT-------TTGTGAGTCTTCGTGTGCCAAATTGATGATACTAAATAAATAAAAATACAATGT
TAATTATCTTGTAGTGAGATTAAG------------------------ACGTGTTTGAACTTTGAACAGAGTATGATCCG
GACCATCAATCGAAGCATGAAAAATGCCTTTCGAGAAAACAAGCATGAAAAATGCCATCGTGCATGCTACCTTTTTCCTT
GAAGGAAAATCAACATGTTACATATCAAAGGAAAAATAAATGGATTACTGAAAATTTAAAATTCCTTCTGCTTCATTTGT
CATCACCTCACGCACACACACTCTCTCTCTTTTCTCTTTTCCT-------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------TTTTTTTTTGAAACAATCACCTCACGCACTCAACACAGG
AAGAAGACCACACTGCCACTCGTCATGATTCTGAAGAGTTTTATTTTTTTTCGCGAATACGCGCGGAGGCATATCATTCC
ATTGGTAGATAGGAGAGAAAACAAGGGTTTGTGGTTACCCCAAAGGCTTGAACAACTAGGGCGCCTTCAAGGTTACCAAT
GAGCATAGGAGAAGGGGTTGCTCAGCCTCACAAGAGGGGGATCAGATTACATGGATAATTCTATCTAAACCCTTGGCACC
AGCGCGTGCCCATCGCCTCACTTCGTCTTTGATGGCACTAGAGAGGTGGGAGTTGGACGGTTGCAGGCCATCGAAGATGA
CTGCGTTTCTATGCTTCCAAATGTACCAAGCTGTGATGATCGCTAGAGAGGCGAAACCTTTGCACTGCTGAGGCGGGGCC
GCGGCGGTGCACTCCAGCCAC
>chr1A_15
--------------TTCCATGGTTAAGCTTGAAGAAATAGGGACAGTCATTCGCGCCCTGCTGGA-----TTCGTTCTAG
CTGTGGCGCATTTGCTATTTCTGCTTGCATCTCTACACTGACTG-----GATGGAGCTTGCCTGTCAGGAATCGGGATTT
GCTAGCTATGC------ATGCCGTGTGTATCCGATGCCTCTGCCCCTTTTAGGCGTTTGCTACATGCAGAAAAAACGAA-
GACACAGCAGCATCTAAAATCTAAAATAGAGTAAAGGTACTCATTGGACCATTCAGGTTATATAGTTAAGATTGAGCAAT
CGGACTCCCC---CAACATGCAACGAGGCCTCAATGATTAAGCTTGGTTTGGTCACAAATATAGTAGTACGTACTACTAC
AAATCTCAGTTCCGGAGATGAACAAGACTACCAGCTCAGACAGAGCTGAATTA-------TCAAGGAGACGCAAGTCATA
CTTCAGTCTTGGCTG----TAATTAAATCGTCCAAACAACAACGCAAGC-------------------------------
--------AGTAGTATCTGCCAAC--TTTTT----TTAGTTCTAGTGTCAGGACATGACAGTTCTTGCATGCACGACGCC
GCCGTGGCATTACAAGATGCTGCAACAATCGCCACTTCATCTTCCTCGCAAAAATGGCGTGCATACGCAGCTCTGGGGGA
ATCCATGGCTTGACATAGTA-------------CTGCATGCAGGTGAAAATATTGGAGTG--------CCGCAGATCTCG
CAGCCTTTCCATTGCCAGCAATCATGGCAGAAAAGCCATGGCCGCG-CGCGACCCCACTCTGTCCACCACATATTTCCAC
TACCAACCCTTTTCCTCCTCCGGCCGCACATGCACCGCCAATCGGTCGAGATTCCCCTTAATCCCTTCCCTCCAATGTTT
AATCGTTCGTAAACCTTCTACTATTTAACACGCTCCACTCATCAGCTCTCCCCTTCCTTAGCAGAGAAGTATAGCTAAGC
CACTAAGCCAGTGTATAAAGAG--------TGTCAGTGCCAACAGAGC----GAGTACCAGCAAGCGGCAATGGAGGTCC
AGATGAGACGGGGCGGCGCGATGGGCCTGGTCCAGGCGGCGGCGGTGGTACTCTCCTACGTGGTGCTGATCATGGCGTCG
ACGGCGGGGGTGCGCGCGCAGCTGCGGGTGGGGTTCTACGACAGCTCGTGCCCGGCGGCGGAGATCATCGTGCAGCAGGA
GGTGAGCAAGGCGGTGTCCGGCAACCCGGGCCTCGCGGCGGGCCTCCTCCGGCTCCACTTCCACGACTGCTTCGTGGGCG
GCTGCGAGGCGTCGGTGCTGGTCGACTCCAGCAAGGGCAACACGGCGGAGAAGGACGCCGGGCCCAACACGAGCCTGCGC
GGGTTCGAGGTGGTCGACCGGATCAAGGCGCGGGTGGAGCAGGCCTGCTTCGGCGTCGTCTCCTGCGCCGACATCCTCGC
CTTCGCTGCCAGGGACAGCGTCGCGCTGGTACGTGCCGTAAAGCAAACCCATGCATCATTAGCCCCGGCTTTAATATAAT
CGGCTGCATTTTGTGGTTA--------ATACAGTATATAAACTGTCGCTTTAGGAAACCACACAGCACATGATCATATGG
GTTTATCAGAATCTGAGTACGTAAAGCTTATGTGATCTGCCATCTGTGT-CCCCTGCCTTTCTCCTTTTCTTTCTGTGCA
CC------ACATGACGCTACTAGCTGCACCTGCATGCGCACACGATGCC----GTTGTTTAGTCTGTCAATC---GCTGA
TGGTGACTGCGTGTGCGCACGCAGACCGGCGGGAACGCGTACCAGGTGCCCGCGGGGCGGAGGGACGGGGGCGTGTCGCG
GGCGCAGGACACGGGCGGCAACCTGCCGCCCCCGACCCCCAACGTGAACCAGCTCACCAAGATCTTCGCCTCCAAGGGGC
TCAGCCAGAAGGACCTGGTGACCCTGTCCGGCGCGCACACCATCGGCGGCTCGCACTGCAGCTCCTTCAGCAGCCGCCTG
CAGACGCCGTCCCCGACGGCGCAGGACCCGACCATGGACCCCGGCTACGTGGCGCAGCTGGCGCAGCAGTGCGGCGCGTC
CGCTGCGCCGGGGCCGCTGGTGCCCATGGACGCCGTCACCCCCAACTCCTTCGACGAAGGGTTCTACAAGGGCGTCATGT
CCAACCGGGGCCTGCTCGCCTCCGACCAGGCGCTGCTCAGCGACGGGAACACCGCGGTGCAGGTGGTCTCCTACGCCAAC
GACCCGGCCACCTTCCAGAGCGACTTCGCCGCTGCCATGGTCAAGATGGGCTACATCGGCGCGCTCACCGGCAGCAGCGG
CAAGATCAGGGCCAACTGCAGAGTCGTATGATCGGTCCATCCATGGCGACATGCATCAAGGATCATCTTTCTTGTTTAGA
AGAGTGGCGATGGATTCATTTGGATTGGACGTGGACCCGTGGTAGCACTTAGCGTTCTTATTTGACCATGTACGTA-GTA
CTGCGCCTATTCTTTTGCTCATCGATCGATATGTATTGATTCATTCTCGGCTGAGGTGTGTGTGTCTTTTGAGGAAATTG
TAACTAGCTACTACTAGCTTTGTGAATTGTGAGTGTTCGTGTGCCAAATTGATGATACTAAATAAATAAAAATACAATGT
TAATTATCTTGTAGTGAGATTAAGGATTCATCTGTCAGCTCCATCCGGACGTGTTTCAACTTTGAACAGAGTATGGTCCG
GACCATCAATCGAAGCATTAAAAATGTCTTTCAAAAAAACGAGCATGAAAAATGCCATCGTGCATGCTACCTTTTTCCTT
GAAGGAAAATCAACATGTTACATATCAAAGG-AAAATAAATGGATTACTGAAAATTTAAAATTC-TTCCGCTTCATTTGT
CATCACCTCACGCTCTCTCTCTCTCTCTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCCTTTTTCCTTTTTTTTTGAAACAATCACCTCACGCACTCAACACAGG
AAGAAGACCACACTGCCACTCGTCATGATTCTGAAGAGTT----------------------------------------
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>chr1D_15
--------------TTCCTTGGTTAAGCTTGAAGAAATACGCACAATCATTCGCGCCCTGCTGGATTCGTTTCGTTCTAG
CTGTGGCGCATTTGCTATT-CTGCATGCATCTCTACACTGACTGGATTGGATGGAGCTTGCCTGTCAGGAATCGGGATTT
GCTAGCTATGCATGCCGATGCCGTGTGTATCCGATGCCTG---CCCTTTTAGGCCTTTGCTACATGCAGGAAAAAA-AA-
GACACAGCAGCATCTAAAATCTAAAATAGAGTAAAGGTACTAATTGGACCATTCCGGTTATATAGTTAAGATTGAGCAAT
CGGATCCCCCCAACAACATGCAACGAGGCCTCAATGATTAAGCTTAGCTTGCTAACAGGTACTGGTGGAGT---------
--ATCTCACTACCAGAGAGGAACGAGACTACCAGCTCAGACAGAGTTGAATTACCAGGTGTCAAGGAGACGCAGGTCATA
CTTCAGTGTTGGCAGA----AACTAAATCGTCCAAACAACACACAAGTACTAACTTTGTACAAAATCAGCGACACTTATT
TTGAAGGAAGTAGTATCTGCCAAT--TCTTTTTAATTAGTTCTAGTGTCAGGACACCGCAGTTCTTGCATGCACGACGCC
GCCGTGGCATCACAAGATGCGGGAACAACCACCACTTCATCTTCCTAAGAG-AATGGCATGCATACACAGCTCCGGGGGA
ATCCATGGCTCGACCGCGGCGTACTGCATGCATCTGCGCGCAGGTGAAAACATTGGAGTACCGATGTACCGCAGATCTCG
CAGCCTTTCCATTGCCACCAATCATGGCAGAAAAGCCATGGCCTCGCCGCGGCCCCACTCTCTCCACCACATATTTCCAC
TACCAACCCTTTTCCCCCTCCGGCCGCACATGCACCGACAATCGGTCGAGATTCCCCTTAATCCCT-----CCAATGCTT
AATTGTAACCCTT-------CTATTTAACACGCTCCACTCATCAGCTCTCCCCTTCCTTAGCAAGGAAGTATAG------
--CTAAGCCAGTGTATAAAGAGGGTGTCAGTGCCACTGCCACCAGAGG----GAGTACGTGC---CGGCAATGGAGGTCC
AGATGAGACGGGGCGGCGCGACGTGCCTGGTCCAGGTGGCGGCGGC---GGTCTCCTACGTGGTGCTGATGGCGT-----
-CGGCGGGGGTGCGCGCGCAGCTGCGGGTGGGGTTCTACGACAGCTCGTGCCCGGCCGCGGAGATCATCGTGCAGCAGGA
GGTGAGCAAGGCGGTGTCCGCCAACCCGGGCCTCGCCGCGGGCCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCGGCG
GCTGCGAGGCGTCGGTGCTGGTCGACTCCACAAAGGGCAACACGGCGGAGAAGGACGCCGGGCCCAACACGAGCCTGCGC
GGGTTCGAGGTCATCGACCGGATCAAGGCCCGGGTGGAGCAGGCGTGCTTCGGCGTCGTCTCCTGCGCCGACATCCTCGC
CTTCGCTGCCAGGGACAGCGTCGCGCTGGTACGTGC---AAAGCAAAGC----CATCATTAGCCCCGGCTT-----TAAT
CGGCTGCATTTTGTGGTTA--------ATA-----TATAAACTGTCACTTTAGGAAACCAGACAGCACATGATCATATGG
GTTTATCAGAATCTCAGTACGTAAAGCCTATGTGATCTGCCATCTGTGT-CCCCTACCTTTCTCCTTTTCTCTCTGTGCA
CCACATGGACATGACGCTACTAGCTGCACCTGCATGCGCACACGATGCCTGCCGTTGTTTAGTCTGTTAATCGTTGCTGA
TGGTGACTGTGTGTGCGCACGCAGACTGGCGGGAACGCGTACCAGGTGCCGGCGGGGCGGAGGGACGGGGGCGTGTCGCG
GGCGCAGGACACGGGCGGTAACCTGCCGCCCCCGACCCCCAACGTGAACCAGCTCACCAAGATCTTCGCCTCCAAGGGGC
TCAACCAGAAGGACCTGGTGACCCTGTCCGGCGCGCACACCATCGGCGGCTCGCACTGCAGCTCCTTCAGCAGCCGCCTG
CAGACGCCGTCGCCGACAGCGCAGGACCCGACCATGGACCCCGGCTACGTGGCGCAGCTGGCGCAGCAGTGCGGCGCGTC
CGCCTCGCCGGGGCCGCTGGTGCCCATGGACGCCGTCACCCCCAACTCCTTCGACGAAGGGTTCTACAAAGGCATCATGT
CCAACCGGGGCCTGCTCGCCTCCGACCAGGCGCTGCTCAGCGACGGGAACACCGCCGTGCAGGTGGTCTCCTACGCCAAC
GACCCGGCCACCTTCCAGAGCGACTTCGCCGCTGCCATGGTCAAGATGGGCTACATCGGCGCGCTCACCGGCAGCAGCGG
CAAGATCAGGGCCAACTGTAGAGTCGTATGATCGGTCCATCCATGGCGACATGCATCAAGGGTCATCTTTCTCGTTTAGA
AGAGCGGCGCTGGGTTGATTTGGATTGGACGTGGACCCGTGGTAGCATTTAGCGTTCTTATTTGACCATGTACGTAGGTA
CTCCGCCTATTCTTTTGCTCATCGATCGATCTGTGTTGATTCTTTTTCGGCTGAGGTGTGTGTGTCTTTTGAGGAAATTG
TAACTAGCTACTACCAGCT-------TTGTGAGTGTTCGTGTGCCAAATTGATGATACTAAATAAATAAAAATACAACGT
TAATTATCTTGCAGTGATATTAAG------------------------ACGTGTTTGACCTTTGAACAGAGTATGATCCG
GACCATCAATCGAAGCATGAAAAATGTCTTTCGAAAAAACAAGCATGAAAAATGCCATCGTGCATGCTACCTTTTTCCTT
GAAGGAAAGTCAACATGTTACATATCAAAGG-AAAATAAATTGATTACTGAAAATTTAAAATTC-TTCTGCTTCATTTGT
CATCACCTCACGCACTCACGCACTCTCTCTCTCTCTCTCTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG---------------------------------------
-------------------------------------------------------------------------ACACAGG
AAGAAGACCACACTGCCACTCGTCATGATTCTGAAGAGTT----------------------------------------
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>SNPs
SSSSSSSSSSSSSS------------------------------------------------------------------
-----S-------------------------------------S----------------S-------------------
------SS-----------------------------------------------------------------------S
-----------------------S---------------------------------------------S----------
------------------------------------------------------------------S----SSS------
------------S-----S--------S--------S-----------------------------------------S-
---------------SSSS--------------------------S----------------------------------
------------------------SS------------------------------------------------------
-----S--------------S---------------------------------------------------S-------
-----S--------S-------------------------------------SS--------------------------
---S--------------------------------------------------------------------------S-
S---------------------SS---------------------------------------------------S----
--S-S---S-----------------------------------------------------------------------
------------------------------------------------SSSS----------------------------
-----------------------SS-------------------------------------------------------
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---------------------S-------------------------S---------------------------S----
-------------------SSSSSSSS-----------------------------------------------------
-------------------------------S-----S-----------S------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S---------------------------------------------------------S--
--------------------------------------------------------S-----------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------------------------------------------S------
----------------S----------------S-------S-----------------S--------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-------S---------------------------------------------
-------------------------------S--------------------------------S---------------
---------------S---S----------S-SSSSS-S--SS-------------------------------------
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----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS
>forward_526
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--------------------------ATCGTCCAAACAACAACGCG----------------------------------
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>reverse_1712
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-------------------------------TTGATCCGCCATCTGTGTCC-----------------------------
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>forward_774
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----------------------------------TGCATGCAGGTGAAAACACC--------------------------
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>reverse_2514
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---------------------------------CACCCGTGCTAGCATTTAGC---------------------------
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