>input_sequence_55155
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--------------------------------------------------------ATGCACTCCGGCGACGCGTCGACC
AGCGAGGATCCTCGGGCGTGCCGGGGGCCGGCGAGGCGCCGGCGCCTGCGGAGCCGCGTGACCGCCGTCCGGGCGCCGCC
GCTCGCCGACGTGCTGCGGGAGCGCGCGCTGGTGCACCTCCCGCCGGCGGCCGCCGCGCGCCTCCGCCTCGTGCACCCGT
CCTGGGAGCGCCGGCTCGCGTCCCCGCTCTTCGCCGTGGCGCACGCGGCCGCCCCGCGACGGATGTCCGGGCTCTTCGTC
CCCAAGGCCGGGTTCCTCCCGTTCGACGGGCCCGACGACGCCGTGCCGTCCCCGACGCTCGCCTTCGCCCCGGCCTCGGA
GGGGGTCACCGTGCTCTCGTCGTCGCACGGCGTCGCGTGCTGCTACTCGCCGGCCGACGACGCCTTCTTCGTGTGCAACC
CGGCCACCGCGTCCTGGGCGCCCGTCCCGTCCCCGCCGTGCCGGACCTGGCCGCGCCCTGCGATCGTCGTCCTCTTCGAC
GCCACGCCGTACAACTTCCGCGGCGACTACGCGCTCGTCTGCGCCGCCGAGTGCGCGCCGGGCTCCGGCGCCTACTGCTT
CCTGGTGTTCACGTCCGGGACGGGCGAGTGGCGGGCCACCGACGCGGTCGTGCCCGCCGAAGGGCTCGTCGCCGCTTCGG
GCGTGGCGGCCGGTGGGACGGCGTGGTGGCGGACGAGCGTCGGCACGGCGGTCGGGTACAGCCCGTTAACGGGGCGCGTC
GAGATGGTACTCTGCCCCGGCGACAGCGGCATGTGGGAGATCGGCTCGGCCGGGGGCAAGCTCCACTGCGCCGTGCGTGA
TCATGACAACAGCGTCGCCGTGTTCCGGCTTGACGAGGACGGGAGCTGGGAGGAGGCCGCCGCGAGGGTGCCCGTCGCGG
AGCTGCTTCCACGTCCGCTGACAAGGCACGG---------GAACGGCGAGGCGAGCGGGCAGGAGCTGGTCGCCCAGTCT
TCCTTCATCGTGGAGGAGGAGGTGGTGCGGCTGGACGACGGCGTGCGGCTCCTGGGGTTCCAGGGCGCGGAGCTGGAGGT
GGTGGCGCTGGCCGGCAGGCGGCTGGTGGCGTTCGACGTGCGGACGCGGCGGCGGCGCGAGGTCAGGGTGCCGGTGGCTC
AAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAGGAGAAACGGTGGGACGGCGCGGAGTACGCCGCGCACACCAACACGCTG
GCGCTCGTCGCGCCCGCCGTGCTCGCGGGCGAGCCGAAGCTCGTGGAGGAGCGACCGGACGCCGGAGGGGTCGCATTTTA
TTGA----------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G420400
CATGATTAACATTGTTTTCCTTCTTTATTTTTTTTAA-TTCATGATTTTTTAAAAACTGATTTAGCAATATCCCACCATG
-TAGTAGTTAACAGCCCAGTACTTTAATCGCTCGATGCATCTCACTTGTCCCATTACACCAGCATGCAAGGTACTGTAGC
GCAGCGAAGCACCAGCATTCATGGCAACTATAGCAAAAGAGCGCATCATCAGAATGTAAAGATATTGTAGTGTTCTTTAT
TTGTCTTCACTGCGTCGTACTGTAGTTTGATAGCGACGC-CCCGAGTCATACCGCGCACGAGCCCGCCGCACGGGACA-T
CGTTGTGCGACGTGCACTATTTAAATTTATTCGTGTGTTTTAAAAAATGTTCGGAATTTTCAAATCTGTCCACACTTTAA
AAACCGTCCGGGCATTTTCAAAATTTGTTCATGTTTTCAAATTTTGTTCATGAAGAAATTGTTTGGAATATCAAATTTTG
TTATTATTT-TTCAAAAAATGTCTGGAATTACAAATTGTATTCCCATTTGAAAAATATTTTTCGAAAATTTTAAATTACT
T-GGGTTTTCAAATATATTCAACATTTGTAATTTGTTCACAATTTGCAGAAAAAAAGGTTTCAAAAAATTTCAAAAATGT
CTTATAATGTCGACGCTGTATTACATTATCTAAATTCCTCGCTTTGTAAATGAAAACAGCAGTCATCGGCTGGAGTGGTA
GGAGCTGGCGATTTTGGGTGC-GTGGTGCTGACATAGTCACACCCTATGAAAAATTGACACGACCTGCGCATTGACCCCT
CTCGGTCGCGTCAG--------CCAAGTCGCGCACCGAGAAGAACCCGGTCGATTTCTACGCTACCGGAGTGCATGGATG
CCTTCCCCGCGACGAAAGTGAAATTTCCACGAAGCCGCACGCGTTGGTTTCGATCTGCTCTGCTCGAAACATCCGCCGCG
GAGGAGCGGACACGGC-AGCGCGCGTGGGCACGATCCGTCTGCTGGTCAGGCAGCCATGCACTCCGGCGACGCGTCGACC
AGCGAGGATCCTCGGGCGTGCCGGGGGCCGGCGAGGCGCCGGCGCCTGCGGAGCCGCGTGACCGCCGTCCGGGCGCCGCC
GCTCGCCGACGTGCTGCGGGAGCGCGCGCTGGTGCACCTCCCGCCGGCGGCCGCCGCGCGCCTCCGCCTCGTGCACCCGT
CCTGGGAGCGCCGGCTCGCGTCCCCGCTCTTCGCCGTGGCGCACGCGGCCGCCCCGCGACGGATGTCCGGGCTCTTCGTC
CCCAAGGCCGGGTTCCTCCCGTTCGACGGGCCCGACGACGCCGTGCCGTCCCCGACGCTCGCCTTCGCCCCGGCCTCGGA
GGGGGTCACCGTGCTCTCGTCGTCGCACGGCGTCGCGTGCTGCTACTCGCCGGCCGACGACGCCTTCTTCGTGTGCAACC
CGGCCACCGCGTCCTGGGCGCCCGTCCCGTCCCCGCCGTGCCGGACCTGGCCGCGCCCTGCGATCGTCGTCCTCTTCGAC
GCCACGCCGTACAACTTCCGCGGCGACTACGCGCTCGTCTGCGCCGCCGAGTGCGCGCCGGGCTCCGGCGCCTACTGCTT
CCTGGTGTTCACGTCCGGGACGGGCGAGTGGCGGGCCACCGACGCGGTCGTGCCCGCCGAAGGGCTCGTCGCCGCTTCGG
GCGTGGCGGCCGGTGGGACGGCGTGGTGGCGGACGAGCGTCGGCACGGCGGTCGGGTACAGCCCGTTAACGGGGCGCGTC
GAGATGGTACTCTGCCCCGGCGACAGCGGCATGTGGGAGATCGGCTCGGCCGGGGGCAAGCTCCACTGCGCCGTGCGTGA
TCATGACAACAGCGTCGCCGTGTTCCGGCTTGACGAGGACGGGAGCTGGGAGGAGGCCGCCGCGAGGGTGCCCGTCGCGG
AGCTGCTTCCACGTCCGCTGACAAGGCACGG---------GAACGGCGAGGCGAGCGGGCAGGAGCTGGTCGCCCAGTCT
TCCTTCATCGTGGAGGAGGAGGTGGTGCGGCTGGACGACGGCGTGCGGCTCCTGGGGTTCCAGGGCGCGGAGCTGGAGGT
GGTGGCGCTGGCCGGCAGGCGGCTGGTGGCGTTCGACGTGCGGACGCGGCGGCGGCGCGAGGTCAGGGTGCCGGTGGCTC
AAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAGGAGAAACGGTGGGACGGCGCGGAGTACGCCGCGCACACCAACACGCTG
GCGCTCGTCGCGCCCGCCGTGCTCGCGGGCGAGCCGAAGCTCGTGGAGGAGCGACCGGACGCCGGAGGGGTCGCATTTTA
TTGACTGGACTTTGGTTGGTTGCTCGCAAGTTTTGCTGGGGACACTA-GAAGCATCGATCGAGATAATAAGTCGTGTGAA
TGCTATTAATTCGTTTAAGAACTTGACACTTTTAGTTACTGTGTGC---TACTACCTGTATTCCCAAATGTGTGTTGAAC
TGCCGAGACCTATTAGACTACCCACAGTGGGAGTAACATCACACATGTCTAGATAAAATAGATGATGTGGCAAATAATAA
ATGAAGAAAAAGAAAAAAGTGGTACATAGCTAGTTACTACTCCCTCCGTCTCATGATGTAAGACGTTTTTTGACACTAGA
CTAGTGTCAAAGAATGTCTTACATTTATGGGACGGAGGGAGTACTAGTAGGAGTAACATCACACATACCAAAGCAAGATG
AGTCTATAACCTAATAAATGAAGTGTTTCATGTTACCACACATATGTTACTCCCCACTATGGCTAGTCCATGTTACTACC
CATTGTGGCTAGTCTTACATTTAGAAACAGAGGGTGTGTACTACACGCGCGTAGGAACGGCCGATTTCCCACAGGTTGTT
TTTGTTCCTGGTTTGGAAAGTGTGTAGGATTACTTATTGAGAAAATTCCTTATTTGACACTATCTTAAAATCAGCCTCCT
TATTTGACAGTGAAAAAATTGTTCTTCCCTATTTGACACAAGTTCTAAATTTTATTCCCTATACGACATTTTCGTCCATT
TTAAGCCTAAATGACACCTGAAAAGACTCTTTTGCCCCTCATGTGGTATGTGCGTGCAGCAACACATACACATGCACCAA
CACACACGCACGCGCACACACACGCAACAACACGCACGCGTGCGTGCACACCCTGAAATCAGTGGATTGAGTAGATTTGC
AATAAGTGGGGTTTAAAACAACGGTGGGACCCACCCTGAAATCAGGGGGCCGGACGAATTTTCAACGTTCTTGGGGAGCC
TGTTGACAATTTGGGTCCTGAGAGATTAGGCGTGGGTCCTGCATGTCA
>chr5D_1
CATGATTAACATTGTTTTCCTTCTTTATTTTTTTTAAATTCATGATTTTTTTAAAACTGATTTAGCAATATCCCACCATG
-TAGTAGTTAACAGCCCAGTACTTTAATCACTCGATGCATCTCACTTGTCCCATTACACCAGCATGCAAGGTACTGTAGC
GCAGCGAAGCACCAGCATTCATGGCAACTATAGCAAAAGAGCGCATCATCAGAATGTAAAGATATTGTAGTGTTCTTTAT
TTGTCTTCACTGCGTCGTACTGTAGTTTGATAGCGACGC-CCCGAGTCACAGCGCGCACGAGCCCGCCGCACGGGACA-T
CGTTGTGCGACGTGCACTATTTAAATTTATTCGTGTGTTTTAAAAAATGTTTGGAATTTTCAAATGTGTCCACACTTTAA
AAACTGTCCGGGGATTTTCAAAAATTGTTCTTGTTTTCAAATTTTGTTCATGAAGAAATTGTTTGGAATACCAAATTTTG
TTATTATTT-TTCAAAAAATGTCTGGAATTACAAATTGTATTCCCATTTGAAAAATATTTTTCGAAAATTTTAAATTACT
T-GGTTTT-CAAATATATTCAACATTTGTAATTTGTTCACAATTTGCAG-AAAAAAGGTTTCAAAAAATTTCAAAAATGT
CTTATAATGTCGACGCTGTATTACATTATCTAAATTCCTCGCTTTGTAAATGATAAGAGCAGTCATCGGCTGGAGTGGTA
GGAGCTGGCGTTTTTGGGTGC-GTGGTGCTGA------------------------------------------------
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>chr5B_1
CATGATTATCATT-TTTTCCTTCTTTATTTTTTTTAAATTCATGATTTTTT-GAAACTAATTTAGCAATGTCCTACCATG
-TAGTAGTTAACAACTCAGTACTTTAATCACTGGATGCA-CTCACTGGT-CCGTTACACCAGCATGCAAGGTACTGTAGC
GCAGCCAAGCACCAACATTCATGGCAACTATAGCAAAAGAGCGCATCACCAAAATATAAAGATATTGTAGCATTCTGTAT
TTTACTTCACTGCATCCTACTGTAGTTCGACAGCGATGCT----------------CACGAGCCCGCCGCACAGGACGGT
CGTTCTGCGGCGTGCACTATTTAAATTTAATTGCGTTTTTTT--AAATGTTCACAATTTTCAAATATGTCCACACTTTAA
AAACTGTTCAGGGATTTAAAAAAATCATGTTTGAAAA-----TTTGTTTGTGAAGAAATTGTTTGGAATGCCAAATTTTG
TC-TTATTT-TTC-AAAAATGTTTGGAATTACAAATTGTATTCCTATTTAAAAAATATTTTTCGAAAATTTTAAATTACT
T-GGGTTTTGAAATATATTCAACATTTTTAATTTGTACACAATTTGCC-AAAAAAAGGTTTCAAAAGTTTTAAAAAATGT
CTTATAATGTCGATGTTGTATTACATTATTTAAATTCCACGTTTTGTAAAAGACAACAACAGTCATTGGCTGGAGTGGTA
GGAGCTGCCGTTTCTCTATGC-GTGGTGC---------------------------------------------------
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>chr2D_1
CACGATTAACATT-TGTTCCTTCTTTATTTTTTTTAAATTCATGATTTTTT-AAAACTGATTTAGCAATGTCCCACTACG
-TACTAGTTAACAACCCAGTACTTTAATCACTCGATGCA-CTTACTAGTCCCATTACACCAGCATGCAAGGTACTGCAGC
ACAGCGAAGCACCAGCATTCATGGCAACTATAGCAAAAGAGTGCATCACCAGAATGTAAAGATATTGTAGCGTTCTGTAT
TTGTCTTCACAGCATCCTATTGTAGTTCGATAGCGACGCACCCGAGTCACAGCGCGGACGAGCCTTCCGCACGAGACGGT
CGTTC---------------------------GTGTTTTTCAAAAAATGTTTGAAATTTTCAAATATGTCCACACTTCAA
AAATTGTTCACATTTTCAAAAAAA----------------------TTCGTGAAGAAATTGTTTGGAATACCAAATTTTG
TTCTAATTT-T-CAAAAAATGTACGGAATTACAAATTGTATTCCCATTTGAAAAAAA----TCGAAAATTTTAAATTACT
CGGGTTTT-CAAATATATTCAACATTTTTAATTTGTTCACAGTTTGCAA-AAAAAAAGGTTTCAAAAATTTCAAAAATGT
CTTACATTGTCCATGCTGTATTACATTATGTAAATTCCTCGCTTTGTTAATGATGATTGCAGTCATCGGCTGGAGTGGTA
GGAGGTGGCGTTTTCTTTGAGTGTGGTGCTGA------------------------------------------------
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>chr1B_8
-------AACATT-TATTTGTTCTTA--TTTTTTCGAATTCATGATTTTTTT--AACTGATTTAGCAATGTCACACCATA
TTAGTAGTTAACAACCCAGTACTTTAATCAGTTGATGCG-CTCACTAGTCCTATTACACTAGCATGCAAGGTACCGTAGC
GCAGTAAAGCACCAACATTCATGGCAACTATAGCAAAAGAGCGCAACAGCAGAATATAAAGATATTGTAGCGTTTTGTAT
--GTCCTCACTGCGTCCTACTATAGTTCGATAGAGACGCCCC-GAGTCACAGCGAGCACGAGCCTGCCGCACGGGATGGT
CGTTGTGCGACGTGCACTATTTAAATTTATCCGTGTTTTTTT--AA----TCGGAATTTTCAAATGTATCCACAATTTAA
AAACTGTCGGGGGATTTTAACAAATTGTTCATGTTTTCAACTTTTTTTTGTGACGAAATTGTTATGAACACCAAATTTTG
TTCTTATTTTT-CAAAAAATGTTCAGAATTACAAATTGTATTCCCAATTGAAAAATATTTTTCGAAAA------------
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>chr5B_759
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---------------------------------------------TATGAAAAAATGACACGACCTGCGCATTGACTCCT
CTCGGTCGCGTCAAGCCGTCAACCAAGTCGCGCACCGAGAAGAACCCGGTCGATTTCTACCCTACCCAGCGGT-----TG
CCTTCGCCGCGACGAAAGTGAAATTTCCACGAAGCCGCACGCGTTGGTTTCGATCTACTCTGCTCGTAACACCCGCCGCG
GAGGAGTAGACACGGC-AGCGCGCGTGGGCACGATCCGTCTGCTGGTCAGGCAGCCATGTACTCCGGCGACGCGTCGACC
AGCGAGGATCCGCGGGCGTGCCGGGGGCCGTCGAGGCGCCGG---CTGCGGAGCCGCGTGACCGCCGTCCGGGCGCCGCC
GCTTGCCGACGTGCTGCGGGAGCGCGCGCTGGTGCACCTCCCGCCCGCGGCCGCCGCGCGCCTCCGCCTCGTGCACCCGT
CCTGGGAGCGCCGGCTCGCGTCCCCGCTCTTCGCCGTGGCGCACGCGGCCGCCCCGCGCCGGATGTCCGGCCTCTTCGTC
CCCAAGGCAGGCTTCCTCCCGTTCGACGGGCCCGACGACGCTGTGCCGTCCCAGACGCTCGCCTTTGCCCCGGCCTCGGA
GGAGGTCACCGTGCTCTCGTCGTCGCACGGGGTCGCGTGCTGCTACTCGCCCGCCGACGACGCGTTCTTCGTGTGCAACC
CGGCCACCGCGTCCTGGGCGCCCGTCCCGTCCCCGCCGTGCCGCACCTGGCCGCGCCCCGCGATCGTCGTCCTCTTCGAC
GCCACGCCGTACAACTTCCGCGGCGACTACGCGCTCGTCTGCGCCGCTGAGTGCGCGCCGGGCTCCGGCGCCTACTGCTT
CCTGGTGTTCACGTCCGGGACGGGCGCGTGGCGGGCCACCGACGCGGTCGTGCCCGCCGAAGGGCTCGTCGCCGCGTCGG
GCGCGGCGGCCGGTGGGACGGCGTGGTGGCGGACGAGCGTCGGCACGGCCGTGGGGTACAGCCCGTTGACGGGGCGCGTC
GAGATGGTACTCTGCCCCGGCGACAGCGGCATGTGGGAGATCGGCTCGGCCGGGGGCAAGCTCCACTGCGCCGTGCGCGA
TCATGACAACAGCGTCGCCGTGTTCCGGCTTGACGAGGACGAGAGCTGGGAGGAGGCCGCCGCGAGGGTGCCCGTGGCGG
AGCTGCTGCCACGTCGGCTCACAAAGCCCGCGGGGCACGAGAACGGCGAGGCGAGCGGGCAGGAGCTGGTCGCCCAGTCT
TCCTTCATCGTGGAGAAGGAGGTGGTGCGGCTGGACGATGGCGTGCGGCTCATGGGGTTCCAGGGCGCGGAGCTGGAGGT
GGTGGCGCTGGCCGGCAGGCGGCTGGTGGCGTTCGACGTGCGGACGCGGCGGCGGCGCGAGGTCAGGGTGCCGGTGGCTC
AA---GAGGAAGAAGAGGAAGAGGAAAAGGAGGAGAAACGGTGGGACGGGGCGGAGTACGCCGCGCACACCAACACGCTG
GCGCTCGTCGCGCCCGCCGTGCTCGCGTGCGAACCGATGCTCGTGGAGGAGTGACCGGACGCCGGAGAGGTCGCATTTTC
TTGACCGGATTTTGGTTGGTTCCTCGCAGGCTTTGCTGTGGGCACTA-GAAGCATCGATCGAGATAATAAGTCGTGTGAA
TGCTATTAGTTCTTCCAAGAGCTTGACACTTTTAGTTACTCTGTGC---TACTACCTGTATTCCCAAATGTGTGTTGAAC
TGCTAAGACCTATTA-----------------------------------------------------------------
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>chr5A_759
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---------------------------------------------TATGAAAAATTGACACGACTTGCGCATTGACCCCT
C--GGTCGCGTCAG--------CCAAGTCGCGCACCGAGAAGAACCCGGTCGATTTCTACCCTGCCCAGC-----GGATG
CCTTCGCCGCGACGAAAGTGAAATTTCCACGAAGCCGCACACGTCGATCTCGATCTGCTCTGCTTGTAACATCCGCCGCG
GAGCGGCAGACAAAGGTAGCGCGCGTGGGCACGATCCGTCTGCTGGTCAGGCAGCCATGTACTCCGGCGACGCGTCGACC
AGCGAGGATCCGCGGGCGTGCCGGGGGCCGTCGAGGCGCCGG---CTGCGGAGCCGCGTGACCGCCGTCCGGGCGCCGCC
GCTCGCCGACGTGCTGCGGGAGCGCGCGCTGGTGCACCTCCCGCCGGCGGCCGCCGCGCGCCTCCGCCTCGTGCACCCGT
CCTGGGAGCGCCGGCTCGCGTCCCCGCTCTTCGCCGTGGCGCACGCGGCCGCCCCGCGAAGGATGTCCGGGATCTTCGTC
CCCAAGGCCGGGTTCCTCCCGTTCGACGGGCCCGACGACGCCGTGCCGTCCCCGACGCTCGCCTTCGCCCCGGCCTCGGA
GGGGGTCACCGTGCTGTCGTCGTCGCGCGGGGTCGCGTGCTGCTACTCGCCGGCTGACGACGCGTTCTTCGTGTGCAACC
CGGCCACCGCGTCCTGGGCGCCCGTCCCGTCCCCGCCGTGCCGGACCTGGCCGCGCCCCGCGGTCGTCGTCCTCTTCGAC
GCCACGCCGTACAACTTCCGCGGCGACTACGCGCTCGTCTGCGCCGCCGAGTGCGCGCCGGGCTCCGGCGCCTACTGCTT
CCTGGTGTTCACGTCCGGGACGGGCGCGTGGCGGGCCACCGACGCGGTCGTGCCCGCCGAAGGGCTCGTCGCCGCGTCGG
GCGTGGCGGCCGGTGGGACGGCGTGGTGGCGGACGAGCGTCGGCACGGCCGTCGGGTACAGCCCGCTGACGGGGCGCGTC
GAGATGGTACTCTGCCCCGGAGACAGCGGCATGTGGGAGATCGGCTCGGCCGGGGGCAAGCTGCACTGCGCCGTGCGTGA
TCATGACAACAGCGTCTCCGTGTTCCGGCTTGACGAGGACGGGAGCTGGGAGGAGGCCGCCGCGAGGGTGCCCGTCGGGG
AGCTGCTGCCACGCCGGCTGACAAAGCCCGCGGGGCACGAGACCGGCGAGGCGAGCGGGCAGGACCTGGTCGCCCAGTCT
TCCTTCATCGTGGAGGAGGAGGTGGTGCGGCTGGACGACGGCGTGCGGCTCCTGGGGTTCCAGGGCGCGGAGCTGGAGGT
GGTGGCGCTGGCCGGCAGGCGGCTGGTGGCGTTGGACGTGCGGACGCGGGGGCGGCGCGAGGTCAGGGTGCCGGTGGCTC
AG---GAGGAAGACGAGGAAGAGGAAAAGGAGGAGAAACGGTGGGACGGCGCGGAGTACGCCGCGCACACCAACACGCTG
GCGCTGGTCGCGCCCGCCGTGCTCGCGTGCGAGCCGATGCTCGTGGAGGAGCGACCGGACGCCGGAGAGGTCGCATTTTC
TTGACCGGACTTTGGTTGGTTGCTCG------------TGGGCACTAGGAGGTATCGATCGAGAAAATAAGTGGTGCGAG
TGCTATTAATTCTTCTAAGAACTTGACACTTTCAGTTAGTACTGTGTATTACTACTTGGATTCCTAAATGTGTGTTGAAC
TGCCAAGGCCTACCA-----------------------------------------------------------------
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--------------TTACATTTAGAAACAGAGGGTGTACTAGGCGCGCGCGTGGGAACGGCCGATTTCCGACAGGTTGTT
TC-GTTCCTGGTTTGGAAAGTGCGTAGGATTACTTATTCCCAATCGCTGT------------------------------
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---------------------------------------------------CCTGAAATCAGTGGATTGAGTAGATTTGC
AATAAGTGGGGTTT-------------------------AAACAGGGGGCC-----------------------------
-------------------GAGAGATTAGGCGTGGGTCCTGCATGTCA
>SNPs
---------------------------------------------------S----------------------------
-----------------------------S--------------------------------------------------
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-------------------------------------------------S-S----------------------------
-----------------------------------------------------------------S--------------
----S-------S----------S----------------------------------------------S---------
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-----------------------------------------------------S--------------------------
----------S---------------------SSSSSSSSSSSSS-----------------------------------
------------------------------------------------------------S-----SSSSS-SSS-----
-----S------------------------------------------------------------S-------------
-------S---------------------------------------------------S--------------------
-----------S------------------S-----------SSS-----------------------------------
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------------------------------S--------------------------------S----------------
----------------------------------------------------------S---------------------
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--------------------------S------------------------------------------------S----
-------------------------------------------------S-----------------S------------
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-------S-------S--------S--S--S-------------------------------------------------
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--SSS--S------------------------------------------------------------------------
---------------------------S---------S-----------------------------S-----------S
-----S----------------------S-S-------S--S--------------------------------------
------------S-S-------------------------S---------------------------------------
----S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-----------------------SSSSSS-S-------S----------------S----------
-SS-------------------S---------------SSS--SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSS--S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-----------------------------
>forward_873
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-----------------------------------------------------TTTCTACGCTACCGGAGTGC-------
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>reverse_2838
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-------------------------------------GTACTACACGCGCGTAGGAA-----------------------
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