>input_sequence_55141
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------ATGAACGGCAGGAGGAAGAAGAGCAGCGGCACGCCGCTGCTCGGCAAGTACGAGCTCGGGCGTCTGCTCGGCCG
CGGCACGTTCGCCAAGGTCTACCTCGCGCACACGGTGACCGGCGGCGAGCCGGTGGCGGTGAAGGTCATCGACAAGGCGG
AGGTGATGGGCACGGAGGGCATGGCGCCTCGCGTGCTCCAGGAGGTGGAGGCCATGCGCCGGCTTCGCCACCCGGGAGTG
CTCCGCCTCCACGAGGTGCTCGCAACTCGCGCCAGCATCTACCTCGTCATGGAGCTCGCCCCCCGCGGCGACCTTCAGTC
CAGGCTCGCCGCTCTGCCAAGCCACCGGTTTTCGGAGAAGGCCGCGCGGCGCGTGTTCGTGCAGCTCACGGTGGCGCTCG
CCCACTGTCACGCGCGCGGCGTGACGCACCGCGACCTCAAGCCGCAGAACCTCCTCCTCGACGGCGCCGGCAACCTCAAG
GTCTCCGACTTCGGCCTCTCGGCGCTCCCAGACTCGTTCCGGGAGGACGGCCGCCTCCACACCGCCTGCGGCACGGCGGC
CTACGCCGCGCCGGAGGTGCTCCGCAACAAGGCATACGACGGCGCCAAGGCCGACGCGTGGTCCTGCGGAGTCACGCTCT
TCGTCCTCGTCGCCGGCCGCCTGCCCTTCGACGACGCTAATATCCCCGATATGTGCCGGAAGGCGTGCCGCCGGCAATAC
GTGGTCCCGCCGTGGGTGTCCCCGCCAACGAGCCGACTGCTGCACCGCCTGCTCGACCCGAACCCGGAAACCCGCGTCGC
CGTAGAGGCTCTAGCGGGGACACACCCATGGTTCGTCAAGCGCTCCCTCAGCCTCGACTCGCACCTTGAAGGCCTCCTCG
ACAGCCAGCCGGAGCGCGCGCTGGCGTTCCGGGCGCCGTCAGTGAACGCGTTCGACATCATATCCACGTCGCAGTGGCTC
GATCTGTCCGGGATGTTCGGCGAGAGCAGGAGGAGCAAGGAGAAGCGGTTCGTGACGACGGCGTCGCCGGAGCAGACGCT
GGAGCAGCTCGGCCGGGCGGGCAGGAAGCTCGGGTACGTGGTCGTGGTGGGGAAGAAAGGAAGGGAGTGCCAGCGCTGTC
CTCTAGGGG---GGCTGACGATATCGGTGGAGATTTCGGAGCTGGAGCCGCCGCTGATGCTCGTCGAGATGCGGCTGGAG
ATGGACGACGGA------GAGGTTCGAGTGTTTAGCTGGGATCAGTTGAGGGTAGAGCTAGGGGATGGTGTACTTAGGGC
TTGGGATAGCAGTGAGGATTTGCAACAAGTTTAG----------------------------------------------
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>chr3A_1_TraesCS3A01G446800
ATCCAATCGCAGCCGATTGTGCTCTCCTACATGACGGCCCCAGACCCCTTTCCCACGCGGCGGCGACTGTCTTCCCCGAA
AGCCGTGGCAACGACGACGTACGTGGGAGGACGGCGGTGGCAACAATCAGCAGACATGCTCCATCCTCATTCCTCCTTCT
TCCACCTCGACGCAAAATTTTGGACCCCACTTTCTCCCTAGCAAAACGGTCCTACCTGGGCAGCGACGGTAGACGTCAGG
ATGGTTACAACACTTGGGCACCGAGGTGGAC--AGTGGCCGTCAAAGGTGGAGAGGAAGGCAAGCGAGAAGATGTGTGCA
AGGGGAGGGCCACAAAATTAGAAGAGAAAACCTTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNN-----------------------------------------------GCTGATGC
AACACGGATAGGACTACGAGATGACACACTTATAAAACTTTTAGGACCCGAATATGCATTTTCATAGTATT---------
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-----------------------------------------------------------------------------AGG
ACTAACTTGACAGTCTTCAAATAGTTTTGGGACTTGTGGTGTATTTTACTCTAGAATTAACCATGGATAAC-AAAGCCAT
AAACCCTAGTAGTTATCTAA------------------------------------------------------------
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---------------------------------------------------------------------ACAACTACACA
GCCAGCCAACTCACTCAGCCATATAAAAC-CCAACACCGTCACCTAATGCTACTA--CATCCACAGACATACATTTGTTA
CTCCATAGCAAACTTTGAGGTGTTCTTA-ATTTCGAGCTAAGCTGCACGTAC----------GCGTGTGGGCGTA-----
--CGCCATGAACGGCAGGAGGAAGAAGAGCAGCGGCACGCCGCTGCTCGGCAAGTACGAGCTCGGGCGTCTGCTCGGCCG
CGGCACGTTCGCCAAGGTCTACCTCGCGCACACGGTGACCGGCGGCGAGCCGGTGGCGGTGAAGGTCATCGACAAGGCGG
AGGTGATGGGCACGGAGGGCATGGCGCCTCGCGTGCTCCAGGAGGTGGAGGCCATGCGCCGGCTTCGCCACCCGGGAGTG
CTCCGCCTCCACGAGGTGCTCGCAACTCGCGCCAGCATCTACCTCGTCATGGAGCTCGCCCCCCGCGGCGACCTTCAGTC
CAGGCTCGCCGCTCTGCCAAGCCACCGGTTTTCGGAGAAGGCCGCGCGGCGCGTGTTCGTGCAGCTCACGGTGGCGCTCG
CCCACTGTCACGCGCGCGGCGTGACGCACCGCGACCTCAAGCCGCAGAACCTCCTCCTCGACGGCGCCGGCAACCTCAAG
GTCTCCGACTTCGGCCTCTCGGCGCTCCCAGACTCGTTCCGGGAGGACGGCCGCCTCCACACCGCCTGCGGCACGGCGGC
CTACGCCGCGCCGGAGGTGCTCCGCAACAAGGCATACGACGGCGCCAAGGCCGACGCGTGGTCCTGCGGAGTCACGCTCT
TCGTCCTCGTCGCCGGCCGCCTGCCCTTCGACGACGCTAATATCCCCGATATGTGCCGGAAGGCGTGCCGCCGGCAATAC
GTGGTCCCGCCGTGGGTGTCCCCGCCAACGAGCCGACTGCTGCACCGCCTGCTCGACCCGAACCCGGAAACCCGCGTCGC
CGTAGAGGCTCTAGCGGGGACACACCCATGGTTCGTCAAGCGCTCCCTCAGCCTCGACTCGCACCTTGAAGGCCTCCTCG
ACAGCCAGCCGGAGCGCGCGCTGGCGTTCCGGGCGCCGTCAGTGAACGCGTTCGACATCATATCCACGTCGCAGTGGCTC
GATCTGTCCGGGATGTTCGGCGAGAGCAGGAGGAGCAAGGAGAAGCGGTTCGTGACGACGGCGTCGCCGGAGCAGACGCT
GGAGCAGCTCGGCCGGGCGGGCAGGAAGCTCGGGTACGTGGTCGTGGTGGGGAAGAAAGGAAGGGAGTGCCAGCGCTGTC
CTCTAGGGG---GGCTGACGATATCGGTGGAGATTTCGGAGCTGGAGCCGCCGCTGATGCTCGTCGAGATGCGGCTGGAG
ATGGACGACGGA------GAGGTTCGAGTGTTTAGCTGGGATCAGTTGAGGGTAGAGCTAGGGGATGGTGTACTTAGGGC
TTGGGATAGCAGTGAGGATTTGCAACAAGTTTAGTT-------TAATTTAGAAGAAGTTGTTTGAAAGCTTAACTAGTTA
ACGGACGTATAAAAAAGTA-----CTCTAGTATATCAAATATAT---ATGTGAATATCTAGCTTGTTTATTT-ATTTTCT
TGATTTCTGTTTTGGATATTACAACGTACA--------------------------------------------------
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---------------------------------------------------------TATACACCTTTTTGGGCAACCAT
GTGAATTCATT----AAGTAAAGATAGTAGGACCTACGAAATTAAGAAACTGAAACGAAGTTCTACTCCCTCCCTTCCAA
AATATTTAAAGTTCAAGGTTTGTCCTAAGTCTAACTTCTTTAAGTTTGACCAAGTTCGCAGAAAAGTATATCAAAATCAA
TAACATTGAATTACCCTCATTAGATTCATCAGAACATATATTTTGGACAAATTTTTGCTACCACCGGTGGTAGTTACCAC
CACTTGAGTTTTGTACGTTGTATGTAGTATCTATCAAATCGGAGAGTATATACGCGTAGTATGTAGTATATAAGAATGTT
TGGATACTACATATACTACTCTTTAGGTAGTATGTATCGTATTTTTCGTATGCTTCTTTTTACGTACAAATATGTACGTA
TTTCATAAATGTAATAAAAATCACTGGCCAACTTGTAATTTCTTCATTTAACTCACTTTGAATTATCTTATATATAGTAT
ATGAACATATTCGAAATGATAAAGTAGTATATATAGTACCACGTGGTAGTATATGAGACATGTGGGGTAACTACCCCTAG
GTGGTAGGATGTATTTTCC-------------------------------------------------------------
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----------------------------------------------------GGATAAACTTAGAACTTCAAATATTTTG
GAATGGAGCAAGTATGTATGTCCAGCTCTACCC--------------CTGTGTAATGGTTGTGTTTATCCAACTTTAATC
GGTGGTGATTTTAATATGAGGAGAGAAACACACTATGAGGTGTCCGTACG-----CGGTCTGATCTTTTTAGTGCTATCA
TAGAAAATTTAGAGTTGCATAAGATTGACCTGTCAAACATGAGGTTCACTTTTCAAATGATCAAGAGGACACCCTTTTTC
AAAAGCTTGATAG
>chr3D_1
ATCCAGTCGCAGCCAATTCTGCTCTCCCACACGACGACACCAGACCCCCTTCCCACGCGGCGGCGACTATCTTCCCCGAA
GGCCGCGGCGACGGCGGCATACGCGACAGGACGGCGATGGCAGCAATCAGCAGACGTGCTCCATCCTCATTCCTCCTTCT
TCCACCTCGACGTAGAAGTCTGGACCCCACTTTGTCCCTAGCAAAACGGTCCTACCTGGGTAGCGAAGGTAGACGTCAGG
ATGGTTACAACACTTGGGCGCCGAGGTGGACTGTGTGGCCGTCAAAGGTGGAGAGGAAGGCAAGGGAGAAGATGTGTGCA
AGGGGATGACCACAAAATTAGAAGAGAAAACCTTTGATTCTTAAAAAGAAAAAGATAAGAGAGATAACCTTTTATTTGGG
GGGAGGGTATTGTGCAAAAAGAAGCCGGTGC-------------------------------------------------
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-----------------------------------------------------------------AGTCAACGCTGATGC
AACACGGAAAGGACTATGGGGTGACACAGTTAGAAAACTTTTAGGACCCCAATATGCATTTTCATAGTATGAGGACTGGC
CAGTAGCCTAGTGGCAAGGGTGTAGTGGCGCTTCCTTGCAGACTGGGGTTCGACTCCCGTCGAGAGCGAATTTCCGCGAT
CTCACCCGGGTGGGCTTCTTTTATAAAAATATGTCCTGGGTGCTAGATCCAATAGATCTCATTTTTTTAATAGTATGAGG
ACTAGCTTGACACCCTCCGAATAGTTTTAGGACTTGTGGTGTATTTTACTCTAGAATTAACCATGGTTAAC-AAAGCCAT
AAACCCTAGTCGTTATCTAA------------------------------------------------------------
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---------------------------------------------------------------------ACAACTACACA
GCCAGCCAACTCACTCAGCCATATAAAAC-CCAACACCGTCACCTAATGCTACTA--CACCCACAAACATACATTTGTTA
CTTCGTAGCAAACCTTGAGGTGTTCTTAGATTTCGAGCTAAGCTGCACGTACGTGCCCCTCTGCGTGTGGGCGTA-----
--CGCCATGAACGGCACGAGCAAGAAGAGCAGGGGCACGCCGCTGCTGGGCAAGTACGAGCTCGGGCGTCTGCTCGGCCG
CGGCACGTTCGCCAAGGTCTATCTCGCGCACACGGTTACCGGCGGCGAGCCGGTGGCGGTGAAGGTGATCGACAAGGCGG
AGGTGATGGGCACGGAGGGCATGGCGCCTCGCGTGCTCCAGGAGGTGGAGGCCATGCGCCGGCTTCGCCACCCGGGAGTG
CTCCGCCTCCACGAGGTGCTCGCCACTCGCGCCAGCATCTACCTCGTCATGGAGCTCGCCCCCCGCGGCGACCTTCAGTC
CAGGCTCGCCGCTCTGCCAAGCCACCGGTTTTCGGAGAAGGCCGCGCGGCGCGTGTTCGTGCAGCTCACGGTGGCGCTCG
CCCACTGCCACGCGCGCGGCGTGACGCACCGCGACCTGAAGCCGCAGAACCTCCTCCTCGACGGCGCCGGCAACCTCAAG
GTCTCCGACTTCGGCCTCTCGGCGCTCCCAGACTCGTTCCGGGAGGACGGCCGCCTCCACACCGCCTGCGGCACGGCGGC
CTACGCCGCGCCGGAGGTGCTCTGCAACAAGGCATACGACGGCGCCAAGGCCGACGCGTGGTCCTGCGGAGTCACGCTCT
TCGTCCTCGTCGCCGGCCGCCTGCCCTTCGACGACGCTAATATCCCCGATATGTGCCGGAAGGCGTGCCGCCGGCAGTAC
GTGGTTCCGCCGTGGGTGTCCCCGCCAACGAGCCGACTGCTGCACCGCCTGCTCGACCCGAACCCGGAAACCCGCGTCGC
CGTAGAGGCTCTGGCGGGGACGCACCCATGGTTCGTCAAGCGCTCCCTCAGCCTCGACTCTCACCTTGACGGCCTCCTCG
ACAGCCAGCCGGAGCGCGCGCTGGCGTTCCGGGCGCCGTCAGTGAACGCGTTCGACATCATATCCACGTCGCAGTGGCTC
GATCTGTCCGGGATGTTCGGCGAGAGCAGGAGGAGCAAGGAGAAGCGGTTCGTGACGACGGCGTCGCCGGAGCAGACGCT
GGAGCAGCTCGGCCGGGCGGGCAGGAAGCTCGGGTACGTGGTCGTGGTGGGGAAGAAAGGAAGGGAGTGCCAGCGCTGTC
CTCTAGGGG---GGCTGACGATATCGGTGGAGATTTCGGAGCTGGAGCCGCCGCTGATGCTCGTCGAGATGCGGCTGGAG
ATGGACGACGGA------GAGGTTCGAGTGTTTAGCTGGGATCAGTTGAGGATAGAGCTAGGGGATGATGTAGTTAGGGC
TTGGGATAGCTGTGAGGATTTGCAACAAGTTTAGTT-------TAATTTAGGAGAAGTTATTTGAAAGCTTAACTAGTTA
ACGGACGTATAAAAAAGTA-----CTCTAATATATCAAATATAT---ATGTGAATATCTAGCTTGTTTATTT-ATTTTCT
TGATTTCTGTTTTGGATATTACAACGTACA--------------------------------------------------
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---------------------------------------------------------TATACACCTTTTTGGGCAACCAT
CTGAATTCATTGACTAAGTAAAGATAGTAGGACCTACGAAATTAAGAAACTGAAACGAAGTTCTACTCCCTCCTATCCAA
AATATTTAAAGTTCAAGGTTTGTCCTAAGTCTAACTTCTTTAAGTTTGACCAAGTTTGTAGAGAAGTATATCAAAATCTA
TAACATCGAATTAGCTTCATTAGATTCACCAGAAGATATATTTTAATGTAATATATATAGGGAAAATGCATCCTACTACC
GGCACTCATTTCTC------------------------------------------------------------------
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------------------------------ATATACTACCATGTGGTAGTATATACTCTACTTTATTATTTTTAGTATGT
TCATATACTATATCTAAGATATTTTAAAGTGAGTTTTATGAAAAAAGTGCAAGTGAACCCATAGTTTTGTTGTATTTATG
AAATACGTACATATTTGTATGTGAAATGGAGTATGCACAAAATATGATACATAATACCAAAAGAGTGGTATATATACTAC
CTAAGATATTGTAGATATTAGCATATTTTTCTATAACAAGAAGTTTGACTTAGGATAAACTTAGAACTTCAAATATTTTG
GAACGGAGCAAGTATGTATGTCCAGCTCTACAACGGATAAAGTGAATCTGTGTAATGGTTGTGTTTATCCAACTTCAATC
GGTGGTGATTTTAATATGAGGAGAGAAACACACTATGAGGTGTTCGTACGACGGACGGTCTGATCTTTCTAGTGCTATCA
TAGAAAATTTAGAGTTGCAGAAGATTGACCTTTCAAACATGAGGTTCACTTTTCAAATGATCATGAGGACACCCTTTTTC
AAAAGCTTGATAG
>chr3B_181
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--------------------TGGACCCCACTTTCTCCCTAGCAAAACGGTCCTACCTGGGCAGCGAAGGTAGACGCCAGG
ATGGTTACAACACTTGGGTGCCGAGGTGGGC--TGTGGCCGTCAAAGGTGGAGTGGAAGGCAAGGGAGAAGATGTGTGCA
AGGGGAGGGCCACAAAATTAGAAGAGAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACACCCATGCAAGTCAACGCTGATGC
AACGCGGATTGGACTGCAGGGTGACACACTTAGAAAACCTTTAGGATCCAAATATGAATTTTCATAGTATT---------
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-----------------------------------------------------------------------------AGG
ACTAACTTGACACTCTCAGAATAGTTTTAGGACCA-----GTATTTTACTCTAGAATTAACCATGGTTAAC-AAAGCCCT
AAACCCTAGTAGTTATCTAAGAGCATCTCCAACAGGCGCGCCCCCGCGGTAAAATCAGTTTTTAGCGTGCGCGGCCCGGT
TTCGCGCGCTCCAGCGGTGGCGGCAAACTATCGCGTGCGGGAGAAAGCGGCAGCTAGCGCGGTAGATTTGGCGCGCCGCT
TCGCGCGCGCCTATAAAATCCAGCACTCGCCACGCGCTCAAACAAACTGCCACGCGCCCTTCCCCTCGCCACCTCGCCGC
TCTTTCTCGCTGCTTTCCCCGCCACCACCGCCCCACCATGCCACCGCGCTGCCGGGGTTCTTCGGGCTACCACGGCGTCC
GCGAGCGCCTGAGCGGCTGGTACTCCGCCGAGATCCGGTCCGGCGACGTTCGGCTCGGCCTCGGCTCGTTCCGGACCACG
CACGAGGCGGCCCGCGCGTACGACGCGGCAGCGTGGCGCTTGGAGAGGCCCCCGTCATAGATGAACTTCCGGGACGTCTT
CACGCGCGAGCAGGTGCAGCGCCTTGCCCCTCCGCCTCGTCTCATCACCGACGAGGATCGTGCGAACCATGTTCGGCAGC
AGCGCCGCCTCCTCATCACCGAGGAGGACGAGCAAGCCATGGCGGAGTGGTGCCGTCGCCAACCGGAGGACGTCACCGCC
GAGGACGCCTTCTGGGCAAAGAGGACGACAAGGCACCGCGCGGACGTGCCGACAGGCGTCGGCGCAAGGCACTGGCCTTA
TCGCAGTGCGATATCGTCGAGAACGGCGGGCAATGGATCTTCTCCCCCAACGATCTGCGTTGGGATGACATGTGGCTCGA
TACCTCGGACAACACCACCGAGGATCATGATGGTGATGATGATGACGGCTGGGAGTCGCCGTAGTTTTTCTCGTTGCACC
GTAGTTTTTTCTATCTAGTTGCACCGTAGTTCTATCTATCTATCTTTGGAAGTATGTAAAATATCTTTGTTCCTTTCTTA
TCTATGCTATGAACTATGTATTTTTTTATCTATGCAAAGTTTATTTTAAAAAAATGTTGTGCGAGAGCACGCGCGCTGCA
TTTTAGTGCGCCTGCTGAAGCTACGCGCGTGCTGCATTTTAGCGCGGCTGCTGGAGCCAGCGCGCTGCGCCGCGCCAAAC
CTGATGAAGGGCGCGCCGCAAACCAGATTTTTGCGCGCCGTGCGTCGGCGGCTGTTAGGGATGCTCTAAACAATTGCACA
GCCAGCTA----ACTCAGCCATATAAAAC-GCAACACCGTCACCTAATGCTACTATACACCCACAGACATACATTTGTTA
CTCCATAGCAAACCTTGAGGTGTTCTTAGATTTCGAGCTAAGCTGCACGTAGGTACCCCTCTGCGTGTGGGCGTA-----
--CGCCATGAACGGCACAAGGAAGAAGAGCAGCGGCACGCCGCTGCTGGGCAAGTACGAGCTCGGGCGTCTGCTCGGCCG
CGGCACGTTCGCCAAGGTCTACCTCGCGCACACTGTGACCGGCGGCGAGCCGGTGGCGGTGAAGGTGATCGACAAGGCGG
AGGTGATGGGCACGGAGGGCATGGCGCCTCGCGTGCTCCAGGAGGTGGAGGCCATGCGCCGGCTTCGCCACCCGGGAGTG
GTCCGCCTCCACGAGGTGCTCGCCACTCGCGCCAGTATCTACCTCGTCATGGAGCTCGCCCCCCGGGGCGACCTTCAGTC
CAGGCTCGCCGCTCTGCCAAGCCACCGGTTTTCAGAGAAGGCCGCGCGGCGCGTGTTCGTGCAGCTCACGGTGGCGCTCG
CCCACTGCCACGCGCGCGGCGTGACGCACCGCGACCTCAAGCCGCAGAACCTCCTCCTGGACGGCGCCGGCAACCTCAAG
GTCTCCGACTTCGGCCTCTCGGCGCTCCCAGACTCGTTCCGGGAGGACGGCCGCCTCCACACCGCCTGCGGCACGGCGGC
CTATGCCGCGCCGGAGGTGCTCCGCAACAAGGCATACGACGGCGCCAAGGCCGACGCGTGGTCCTGCGGAGTCACGCTCT
TCGTCCTCGTCGCCGGCCGCCTGCCCTTCGATGACGCTAATATCCCCGATATGTGCCGGAAGGCGTCCCGCCGGCAGTAC
GTGGTCCCGCCGTGGGTGTCCCCGCCAACGAGCCGACTGCTGCACCGCCTGCTCGACCCGAACCCGGAAACCCGCGTCGC
CGTAGAGGCGCTGGCGGGGACGCACCCATGGTTCGTCAAGCGCTCCCTCAGCCTCGACTCTCACCTTGACGGCCTCCTCG
ACAGCCAGCCGGAGCGCGCGGTGGCGTTCCGGGCGCCGTCAGTGAACGCGTTCGACATCATATCCACGTCGCAGTGGCTC
GATCTGTCCGGGATGTTCGGCGAGAGCAGGAGGAGCAAGGAGAAGCGGTTCGTGACGACGGCGTCGCCGGAGCAGACGCT
GGAGCAGCTCGGCCGGGCGGGCAGGAAGCTCGGGTACGTGGTCGTGGTGGGGAAGAAAGGAAGGGAGTGCCAGCGCTGTC
CTCTAGGAG---GGCTGACGATATCGGTGGAGATCTCGGAGCTGGAGCTGCCGCTGATGCTCGTCGAGATGCGGCTGGAG
ATGGACGATGGA------GAGGTTCGAGTGTTTAGCTGGGATCAGTTGAGGGTAGAGCTGGGGGATGGTGTAGTTAGGGC
TTGGGATAGCCGTGAGGATTTGCAACAAGTTTAGTT-------TAATTTAGAAGAAGTTATTTGGCAGCTTAACTAGTTA
ACGGACGCATAAAGGGGTA-----CTCTAATATATCAAATATAT---AT--------CTAGCTTGTTTATTT-ATTTTCT
TGATTTCTGTCTTGGATATTTTTTTTTGACGAAATGTAGCAGCGCTACTTTCATTCATTAAGAAGAGGAGCCGGCAGAGC
CGTGAAATTACAGGGGAATGCAAAAATGAGAGGCAATATTACACCACTGAACACAACAAAAAAGAAAGAGAGAAGAAGAG
AACAGCTGGGTCGAGGCGACAACATGGCAAATGCCGAAAAGAAAAAGGACCAAAGTGCCATCATCTTCCATTGTTCTCAC
CAATGAGGGGCTGCATGAGGAACACCACCACCGCAGACGAAGAGCTCCCATCAACCGAGACCATCCATGATGCCTCAAGG
CTATTGGTGCAGCCGAAGGGCAACGAGCAACCGAGTCCACACCCGGACGAAGGGCCAAACGCAACCGAGGCTACAACACA
ACAGCGGCACCGCCGGCAAAGCCGAAGGGCATCAAAGAGCTGAGTCCATTGAGTAAGTATACACCTTTTTGGGCAACAAT
CTGAATTCATTGAGTAAGTAAAGATTGTAGGACCTACGAAATTAAGAAACCGAAACAAAGTTCTACTCCCTCCATTCCAA
AATTC---AAGTTCAAGGTTTGTCCTAAATCTAACTTCTTTAAGTTTGATCAAGTTTGCAGAAAAGTATATCAAAATCTA
TAGCATCGAATTAGCTTCATTAGATTCATCGGAACATATATTTTC-----------------------------------
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----ATACTATATATAATTTA-----------------------------------------------------------
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-----ATGTTGTAGATATTAGCAAATTTTTTTATAACAAGAAGTCTAACTTAGGATAAACTTAGAACTTCAAATATTTTG
GAACGGAGCAAGTATGTATGTTCAGCTCTACAACGGATAAAGTGAATCTGTGTAATGGTTGTGTTTATCCAACTTTAATC
GGTGGTAATTTTAATATGAGGAGAGAAACACGCTATGAGGTGTCCGTACG-----CGGTCTGATCTTTTTAGTGCTATCA
TAGAAAAATTTGAGTTGTACAAGATTGACCTTTCAAACATGAGGTTCACTTTGCAAATGACCATGAGGACACCCTTTTTC
AGAAGCTTGATAG
>chr5A_797
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---------------------------------------------------TAGCACTAACCATGGGTAACGAAAGCCCT
AAACCCTAGTTAACAA----------------------------------------------------------------
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-----------------------------------------------------------------CTAAACAATTGCACA
GCCAGCCA----ACTCAGCCATATAAAAAGCCAACACCACCACCTAATGCTACGTACACGGTGGCATCTCTAACCTTGAG
GAGC-----------TGAGGTGCTTTTGGATTTCTAGCTA-GCAGCACGTAGGTACGAACGTCGTCAGTGGTCGTACGCA
GTCGCCATGAACGGCAAGAGCAAGACGAGCAAGAGCACGCCACTGCTGGGCAAGTACGAGCTCGGGCGACTGCTCGGCCG
CGGCACGTTCGCCAAGGTCTACCTCGCGCACCCGCTCACTGGCGGTGAGCCAGTGGCAGTGAAGGTGATCGACAAGGCGG
AGGTGATGGATATGGAGGGCATGGCGCCTCGCGTGCTCCGGGAGGTGGTGGCCATGCGCCGGCTTCGCCACCCGGGCGTG
CTCCGCCTCCACGAGGTGCTCGCCACCCGCTCCAGGATCTACCTCGTCATGGAGCTAGCCCCCCGCGGCGACCTCCAGTC
CATGCTCGCCGCTCTGCCAAACCGCCGCTTTTCGGAGAAGGCCGCGCGGCGCGTGTTCGTGCAGCTCACGGCCGCGCTCG
CCCACTGCCACGCGCGCGGCGTGACGCACCGCGACGTCAAGCCGCAGAACGTCCTCCTCGACAGCGCCGGCAACCTTAAG
GTGTCCGACTTCGGCCTATCGGCGCTCCCAGACACGCTCCGGGACGACGGCCGCCTCCACACCGCCTGCGGCACGCCGGC
CTATGCCGCGCCGGAGGTGCTCCGCCACACATCATACGACGGCGCCAAGGCCGACGCGTGGTCCTGCGGCGTCATGCTCT
TCGTCCTCCTCGCCGGACGCCTGCCCTTCGACGACGCGAACATTCCTGATATGTGCCGGAAGGCGCACCGCCGTGAGTAC
GAGGTCCCGCCTTGGGTGTCCCCGCCGGCGCGCCGCCTGGTGCACCGCCTGCTCGACCCGAACCCGGCGACCCGCGTCTC
CGTGGAGGCTCTGGCGGCGACGCACCCATGGTTCGTCAAGCGCTCCCTCAGCCTCGACTCGCAGCTCGACGGCCTCCTTG
ACGGCCAGCCAGAGCGCGCGCTGGCGTTCCGGGCGCCGGCGGTGAACGCATTCGACATCATATCCATGTCGCAAGGGCTC
GACCTGTCCGGGCTGTTCGGCGGGAGCAAGAGCAG---GGAGAAGCGGTTCATGACGACAGCGTCGCCGGAGCAGACGCT
GGAGCAGCTCAGCCGGGCGAGCGGGAAGCTCGGGTACG---TCGTGGTGGGGAAGAAAGGAGTGGGGTGCCAGCGCCGTC
CTCCAGCAGGGAGGCCGGCAATATCAGTGGAGATTTCGGAGCTGGTGCCGCCACTAATGCTCGTCGAGATGCGGCTGGAG
ATGGACGACGGCGACGGCGAGGTTCAAGTGTTTGGTTGGGACCAGTTGAGGGTGGAGCTAGGGGAT---GTAGTAAGAGC
TTGGCATAGCTGTGAAGATTTGGAACAAGTTCAGTAA-CTTTCTTATTCAGAAGAAGTTATTTTGCAGCTTAGCTAGTTA
ATGGAGGTGTAAAAAGGTA-----CTCTAAAATGTCAATATATGTGAAT--------CTAGCTTGTTTGTTT-TTTTACT
TGTTTTCTGTTTTGAATATTTCACTGTACA--------------------------------------------------
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>chr5D_997
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--CGCCATGAACGGCAAGAGCAAGAAGAGCAAGGACACGCCACTGCTGGGCAAGTACGAGCTCGGGCGACTGCTCGGCCG
CGGCACGTTCGCCAAGGTCTACCTCGCGCATCCGGTCACTGGCGGTGAGCCAGTGGCAGTGAAGGTGATCGACAAGGCGG
AGGTGATGGGCATGGAGGGCATGGCGCCTCGCGTGCTCCGGGAGGTGGTGGCCATGCGCCGGCTTCGCCACCCGGGCGTG
CTCCGCCTCCACGAGGTGCTCGCCACCCGCTCCAGAATCTACCTCGTCATGGAGCTAGCCCCCCGTGGCGACCTCCAGTC
CATGCTCGCCGCTCTGCCAAACCGCCGCTTTTCGGAGAAGGCCGCGCGGCGCGTGTTCGTGCAGCTCACGGCGGCGCTCG
CCCACTGCCACGCGCGCGGCGTGACGCACCGCGACGTCAAGCCGCAGAACGTCCTCCTCGACAGCGCCGGCAACCTTAAG
GTGTCCGACTTCGGCCTATCGGCGCTCCCAGACACGCTTCGGGACGACGGCCGCCTCCACACCGCCTGCGGCACGCCGGC
CTATGCCGCGCCGGAGGTGCTCCGCCACATATCATACGACGGCGCCAAGGCCGACGCGTGGTCCTGCGGCGTCATGCTCT
TCGTCCTCCTCGCCGGACGCCTGCCCTTCGACGACGCGAACATCCCCGATATGTGCCGGAAGGCGCACCGCCGTGAGTAC
GAGGTACCGCCGTGGGTGTCGCCGCCGGCGCGCCGCCTGGTGCACCGCCTGCTCGACCCGAACCCGGCGACCCGCGTCTC
CGTGGAGGCTCTGGCGGCGACGCACCCATGGTTCGTCAAGCGCTCCCTCAGCCTCGACTCGCAGCTCGACGGCCTCCTCG
ACGGCCAGCCAGAGCGCGCGCTGGCGTTCCGGGCGCCGGCGGTGAACGCATTCGACATCATATCCATGTCGCAAGGGCTC
GACCTGTCCGGGCTGTTCGGCGGGAGCAAGAGCAG---GGAGAAGCGGTTCATGACGACGGCGTCGCCGGAGCAGACGCT
GGAGCAGCTCAGCCGGGCGAGCGGGAAGCTCGGGTACG---TCGTGGTGGGGACGAAAGGAGTGGGGTGCCAGCGCCGTC
CTCCAGCAGGGAGGCCGGCAATATCAGTGGGGATTTCGGAGCTGGTGCCGCCACTAATGCTCGTCGAGATGCGGCTGGAG
ATGGACGACGGCGACGGCGAGGTTCAAGTGTTTGGTTGGGATCAGTTGAGGGTGGAGCTAGGGGAT---GTAGTAAGGGC
TTGGCATAGCTGTGAAGATTTGGAACAAGTTCAGTAAACTTTCTTATTCAGAAGAAGTTATTTTGCAGCTTAGCTAGTTA
ATGGAGGTGTAAAAAGGTA-----CTCTAAAATGTCAATATATGTGAAT--------CTAGCTTGTTTGTTT----TACT
TGTTTTCTGTATTGAATATTACACTGTACACTATA---------------------------------------------
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>chr5B_998
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---GCCATGAACGGCAAGAGCAAGAAGAGCAAGGGCACGCCATTGCTGGGCAAGTACGAGCTCGGGCGACTGCTCGGCCG
CGGCACGTTCGCCAAGGTGTACTTCGCGCACCCGGTCACTGGCGGTGAGCCAGTGGCAGTGAAGGTGATCGACAAGGCGG
AGGTGATGGGCATGGAGGGCATGGCGCCTCGCGTGCTCCGGGAGGTGGTGGCCATGCGCCGGCTTCGCCACCCGGGCGTG
CTCCGCCTCCACGAGGTGCTCGCCACGCGCTCCAGGATCTATCTCGTCATGGAGCTAGCCCCCCGTGGCGACCTCCAGTC
CATGCTCGCCGCTCTACCAAACCGCCGCTTTTCGGAGAAGGCCGCGCGGCGCGTGTTCGTCCAGCTCACGGCGGCGCTTG
CCCACTGCCACGCGCGCGGTGTGACGCACCGCGACGTCAAGCCGCAAAACGTCCTCCTCGACAGCGCCGGCAACCTTAAG
GTGTCCGACTTCGGCCTATCGGCGCTCCCAGACACGCTTCGGGACGACGGCCGCCTCCACACCGCCTGCGGCACGCCGGC
CTATGCCGCGCCGGAGGTGCTCCGCCACACATCATACGACGGCGCCAAGGCCGACGCGTGGTCCTGTGGCGTCATGCTCT
TCGTCCTCCTCGCCGGACGCCTGCCCTTCGACGACGCGAACATCCCCGATATGTGCCGAAAGGCGCACCGCCGTGACTAC
GAGGTCCCGCCGTGGGTATCCCCGCCGGCGCGCCGCCTGGTGCACCGCCTGCTCGACCCGAACCCGGCGACCCGCGTCTC
CGTGGAGGCTCTGGCGGCGACGCACCCATGGTTCGTCAAGCGCTCCCTCAGCCTCGACTCGCAGCTCGACGGCCTCCTCG
ACGGCCAGCCAGAGCGCGCGCTGGCGTTCCGGGCGCCGGCGGTGAACGCATTCGACATCATATCCATGTCGCAAGGGCTC
GACCTGTCCGGGCTGTTCGGCGGGAGCAAGAGCAG---GGAGAAGCGGTTCATGACGACAGCGTCGCCGGAGCAGACGCT
GGAGCAGCTCAGCCGGGCGAGCGGGAAGCTCGGGTACG---TCGTGGTGGGGAAGAAAGGAGTGGGGTGCCAGCGCCGTC
CTCCAG---GGAGGCCGGCAATATCAGTGGGGATTTCGGAGCTGGTGCCGCCACTAATGCTCGTCGAGATGCGGCTGGAG
ATGGACGACGGCGACGGCGAGGTTCAAGTGTTTGGTTGGGATCAGTTGAGGGTGGAGCTAGGGGAT---GTAGTAAGGGC
TTGGCATAGCTGTGAAGATTTGCAACAAGTTCAGTAAACTTTCTTATTCAGAACTAGTTATTTTGCAGCTTAGCTAGTTA
ATGGAGGTGTAAAAAGGTACTTTGCTCTAAAATGTCAATATGTGTGAAT--------CTAGCTTGTTTGTTTCTTTTACT
TGTTTTCTGTTTTGAATATTACACTGTACA--------------------------------------------------
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-------------
>SNPs
-----S--------S---S--------S---S----S-S---------S-------------------S-----------
S----S---S---S--S-S----S-SS---------S-----S------------S------------------------
------------S-S--S-S----------------------------------------------S-------------
-------------------S-------------S------------------------------S---------------
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------------------S-S-----------S----------------S------------------------------
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------------S---S-S---------S-------------------------------------S-------------
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-----------------------------------------------------------S--------------------
-------------S------------------------------------------------------------------
----------------S------------------------------S--------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
------------S--------S-----------------------------------------------S----------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------S-------
----------S------------------------------------------------S--------------------
-----------------------------S--------------------------------------------------
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S------------------------------------------------------------------------S------
--------------------------------------------------------S---------------------S-
------S------S-S----------------------------SSSSS---S-S-SSSSSS-SSSSSSS-SS-SSSSS-
SS-SSSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----S------------SSSSS-SS-SSSSSSSS-SSSSS-SS
SSSSSSSSSSSSSS-SSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
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---S---------------------------SS-----------------------------------------------
--------------------------------------------------------------------------------
-------------------S-----------S-------------------------------S----------------
-------------
>forward_175
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTTCT
TCCACCTCGACGCAA-----------------------------------------------------------------
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>reverse_3222
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---------------------ACACCCATGGTTCGTCAAGC---------------------------------------
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>forward_178
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CT
TCCACCTCGACGCAAAAT--------------------------------------------------------------
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>reverse_3270
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---------------------------------------------------------------------AGGCCTCCTCG
ACAGCCA-------------------------------------------------------------------------
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>forward_305
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GGTGGAGAGGAAGGCAAGC---------------
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>reverse_3673
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------------------------------------------------------------------------CTTAGGGC
TTGGGATAGCAGT-------------------------------------------------------------------
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>forward_3270
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---------------------------------------------------CCTCGACTCGCACCTTGAA----------
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>reverse_4529
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------------------------------------------------AAATTTTTGCTACCACCGGTGG----------
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-------------
