>input_sequence_55122
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------ATGGCTACTGTCTTCCCCCGTGACGCCGGCGTC
TCCACGCCGGAAGCCGACGAGGCTAAGAAAATCTACGATGAAGCACGGCGAGTGGTGTCCACCTACGAGACTGTTCCCAG
TCCCAGCGGAACCCTGCAGGATTACTGCCGCCACCCCAGCGGCTGGTGCATAACCCTGCCGATCATGGTGAGCTCCATGG
TCGCAGAGCAGCACTTTGAGGCGCGTGGCACCGACGTGCTCCTTGTTACGATGCCCAAGTCCGGGACTACCTGGATCAAG
GCCCTCCTCTATGCTGCGGCCCACCGCACTGACGACACATCATCGTCCATACTCCGGCAGCTCGCCTCCCACAACTCCCA
CCAGCTCGT-----TCCTTTCCTCGAGGCCCAGGTCTACACCAAGGACCAGATTCCAGACCTGAGCTCGCTTCCCGCGCC
ACGGCTCTTCGCCACGCACATCCCGGCTGAGTCGCTGCCACCCTCCGTTGTGGCGTCCGGCTGCAAGGTACGTACGTTTT
CTACGAGTGAAGCGCACTATAGTCCCTAAATTACTTCATTCAAGGGTGTCGTGTAAGTCCTCAAACTATGAAAATTGACA
TTCAAATTCTTGAAATGTAATAAGTGTGTCTCTGAATTGT----------------------------------------
------------------------ATTTCGGGGATTTGGATGGCGATTTTCATAGTCCAAGGTCTAACGTGACACCCAGA
AACAATTCAGGGACCTGAGCAGAAAACAACATTAA---------------------------------------------
-------TGTCTTGCGACAATTACATAGTAGCATCATGCA------------TGCAGGTGGTGTACTTGTGCCGGGACCC
CAAGGACTGCTTCGTGTCTCTCTGGCACTTTATGAACAAGTTCACCCCA------TGGGACATCGACGAGGCACACGGCC
GGTTCTGCGAGGGTGTCTCGTTGTATGGGCCATTTTGGGAGCACGTGCTGAGCTACTGGCGTTGGCACGTCGACCGACCG
GGTCAGGTGCTCTTCCTGACTTACGAGGAGCTCAGCGCCGACCCGCTCGGCCAACTGAGGCGCCTAGCCGAGTTCATTGG
GCGCCCCTTCACGCCGGGGGAGCAGGAGGCGGGAGTGGACAGGGAGATTGCGGAGGCATGTGCCATGAAAAGCATGGTCA
ACCAGGAGGTGAACCAGTCCAGGACGACCGAAATCGTTGAGATGCCGATTCCCAACGGGATCTTCTTCCGGCGAGGCGTG
GTCGGAGACTGGACCAACTACCTCACGCCGGAGATGGCAGGAAGGATCGATGAGATTACCAAGAGCAAGTTTGAAGGATC
CGGCCTCATGCTGCCGAAAACAATCTCGGAAATCTCAAAGATCTAG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr6D_1_TraesCS6D01G231100
AGCGGCACTTTCAATAAGGGGTAACACATCGGTATTACTCTACACAAGCCCATCCTCTTAGAAACTGATTGTTCTTTTGT
GGCTTCCTTTCTAGGAAACGGTTATTTGGACAGGTCTTCCCTAGTTGATCTGAAGATGGAAGCATTGAGCATTTCGAGGT
TGATGACAAGTTTCAAGATTTCCAAGATTAACAGAAGGGCCAATAGGGTGGCGCATGAAATTGCTAAATTCAGTTTTGTT
AATAGGTCTGATAGTGTGTCTTAATAGTGTTCCGCCCTGCGTGGCTGAAGTTGTAATAGACGATTGTATGAACATTTTTA
ATTAATTAATATATGGGAGGGGTTTTAAAAAAAAAGGGGCAACACATGCTCGCACCGTTGTTGTCACATTCGACCAATGA
GTAAGGATTTTCATCCTGATTGTCAAAATCAACCACTTAAGGTTGGTACATTAAACTACAAGGTAATACATTCAACAAGG
TAACGACACAAGTTCATCACTGATGAGTCTGGCCAATAAAATCCATGACAAGAATTTTCACCTGGACATGGATTAGCGTT
TCAAATATCATCTTGAAGATAGATCTTTTGAGTCAAGCCAGCCAGTACTCCCCAGCCAGCCCCAAAACAGTAAGCATCAC
CTTATTTAATCTGCACTCACTGTCTCCTAGACGATGCATCAATCTTATTTTTGGTGGTCAAATTAATGGCCCCAACTCCC
AAGGATTCAACAGGATAGCACAGAATCATATCATCCCTTGTGCAATTATTTAGTGCACAAAACAGCTAAGTCAACGATTT
GCTGAGTTCACCAAGCGATCCTTTCATCAATCCGCAAGAAAGGAACAATGTGGTGGAGACTAAGAGAGTGTACGGCTTTA
C-----TACGAGCTAGCAGTATAAAACTAGTAAAGCTATTGCTACTCAATACACAACCGGGCCCTGTATTACACTACAGC
ACCGCGCCTACACGCAACGATTTACGATTAGCCTAGCGACTC--GGCATGGCTACTGTCTTCCCCCGTGACGCCGGCGTC
TCCACGCCGGAAGCCGACGAGGCTAAGAAAATCTACGATGAAGCACGGCGAGTGGTGTCCACCTACGAGACTGTTCCCAG
TCCCAGCGGAACCCTGCAGGATTACTGCCGCCACCCCAGCGGCTGGTGCATAACCCTGCCGATCATGGTGAGCTCCATGG
TCGCAGAGCAGCACTTTGAGGCGCGTGGCACCGACGTGCTCCTTGTTACGATGCCCAAGTCCGGGACTACCTGGATCAAG
GCCCTCCTCTATGCTGCGGCCCACCGCACTGACGACACATCATCGTCCATACTCCGGCAGCTCGCCTCCCACAACTCCCA
CCAGCTCGT-----TCCTTTCCTCGAGGCCCAGGTCTACACCAAGGACCAGATTCCAGACCTGAGCTCGCTTCCCGCGCC
ACGGCTCTTCGCCACGCACATCCCGGCTGAGTCGCTGCCACCCTCCGTTGTGGCGTCCGGCTGCAAGGTACGTACGTTTT
CTACGAGTGAAGCGCACTATAGTCCCTAAATTACTTCATTCAAGGGTGTCGTGTAAGTCCTCAAACTATGAAAATTGACA
TTCAAATTCTTGAAATGTAATAAGTGTGTCTCTGAATTGT----------------------------------------
------------------------ATTTCGGGGATTTGGATGGCGATTTTCATAGTCCAAGGTCTAACGTGACACCCAGA
AACAATTCAGGGACCTGAGCAGAAAACAACATTAA---------------------------------------------
-------TGTCTTGCGACAATTACATAGTAGCATCATGCA------------TGCAGGTGGTGTACTTGTGCCGGGACCC
CAAGGACTGCTTCGTGTCTCTCTGGCACTTTATGAACAAGTTCACCCCA------TGGGACATCGACGAGGCACACGGCC
GGTTCTGCGAGGGTGTCTCGTTGTATGGGCCATTTTGGGAGCACGTGCTGAGCTACTGGCGTTGGCACGTCGACCGACCG
GGTCAGGTGCTCTTCCTGACTTACGAGGAGCTCAGCGCCGACCCGCTCGGCCAACTGAGGCGCCTAGCCGAGTTCATTGG
GCGCCCCTTCACGCCGGGGGAGCAGGAGGCGGGAGTGGACAGGGAGATTGCGGAGGCATGTGCCATGAAAAGCATGGTCA
ACCAGGAGGTGAACCAGTCCAGGACGACCGAAATCGTTGAGATGCCGATTCCCAACGGGATCTTCTTCCGGCGAGGCGTG
GTCGGAGACTGGACCAACTACCTCACGCCGGAGATGGCAGGAAGGATCGATGAGATTACCAAGAGCAAGTTTGAAGGATC
CGGCCTCATGCTGCCGAAAACAATCTCGGAAATCTCAAAGATCTAGCATCCCTCC---GTCGTGT-TTGATGTTTGAAAT
CGTTCACCTTTTTTTT----CTCTTGTTGTAAACTGCACCCTGCTGGCACTGGCTTGGCTGAATAAAAAAAGCTTGCATT
GTTCTTGTTGATCAAACGAAATACCAGCTGGCGAGTTGTTGATGTTACGGAAAAGGCCTGCTTAGTCTTAGGTATTTTTC
TTATCGGTTTAATTGTGATCAAATGTGTTTGTACTCTGCTTAATTATTAATAAAAATGATTGTATGCATCACAATAATAC
AGAGGCCAAGGGACTCAACTTCATTTTCCAAAACAAGAGAATACTAACCTGCTCCGAATGATCTTCTACATGATTAAGCA
CGATGGCGCCACAAGTCAAAGGACGCCAAGATCAAGCTGTATAGTATTTTCCAGTTCAACAAAATAAGCGAATCAAAAGT
TTCAACTGGTATGAGCATTGTGTTCATCGTGAAATAAAAAAGTAAAAAAACAACACGGCGTCATATCTCGGAAAATCCTA
TATGCCGCTCGCTGCGTCAAACTGCCGGCGCTTCGCACAGGCGAGCGACCGAGCAGCGACGCAACGGCCGGCACA-TTTA
ACCGTTCCAACGCTCCCGGTTTTGGGAACCTTCTAGGGGTTCCCAGCT----------GGTTTTGGGAACCTTCTAGAAG
GTTCCTGAACCGGTTTTT-ATTTTCCTTTCTTTTTCTATTTCTGTGTTGTTTTTATTCTATTTTACTTATTTATTTGTTT
TTTCTTTTTTGTTTTTCAAGTTTATG-TTTCTTTTTCAAAAAAATGTTCGTGCTCTTA--------------------AA
AATTGTTCAAAATTTCTAAAAATGTTTGTGTTTTCAAATTTTGTTCATAAATTCAAAAACTGTATGCATTTTTCAAAAAT
TGTTCGGGAATTTTCAAAAAATATTTGTTCATAAATTCAAAAACTGTATGAATTTTGTTCAAAATGTTTTTGTTCAAAAT
ATTCACAAA-TTTAAAAAAAAATCGGGATTTCAAAAAATATTCCCGTT
>chr6A_770
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TTCGTGCACAAAACAGCTAAGTCAACGATTT
TCTGAGATCACCAAGCGATCCTTCCGTCAATCCGCAAGAAAGGAGCAATGTGGAGGAGACTAAGAGAGTGTACGAGTTTA
CTACTGTACGAGCTAGCAGTATAAAATTAGTAAAGCTATTGCTACTCAATACACAACCGGGCCCTGCATTACACTACAGC
ACCGCGCCTACACGCAACGAATTACGACTAGCCTAGCGACTCGGGGCATGGCTACTGTCTTCCCCCGTGACGCTGGCGTC
TCCACGCCGGAAGCCGACGAGGCTAAGAAAATCTACGAGGAAGCACGGAGAGTGGTGTCCACCTACGAGACCGTTCCCA-
-----GCGGAGCCCTGCGGGATTACTGCCGCCACCCGGGCGGCTGGCACATGATCATGCCGGTCATGGTGAGCTCCATGG
TCGCAGAGCAGCACTTTGAGGCGCGTGGCACCGACGTGCTCCTTGTTACGATGCCCAAGTGTGGGACTACCTGGATCAAA
GCCCTCCTCTATGCTGCGGCCCGCCGCACCGACGACACATCGTC---CATACTCCGGCAGCTCGCCTCCCACAACTCCCA
CCAGCTCGT-----TCCTTTCCTCGAGGCCCAGGTCTACACCAAGGACCAGATCCCCGACCTCAGCTCGCTTCCAGCGCC
ACGGCTCTTCGCCTCGCACATCCCGGCTGAGTCTCTGCCACCCTCCGTTGTGGCGTCGGGCTGCAAGGTACGTACGTTTT
CTATGAGTGATA--------AGTCCTTCAATTAT----TTCAGGGATGTCATGTAAGTCCTCGAGCCATAAAAAATGACA
TTCAAGTTCTGGAAATGTTAATAAGCTGTCATCTGGTTCTAAACCAGTGCAACCCTAGAATAGCCCTTGGACCTATATTT
TGCATAGCATAACAAGCTTACTACATTTCAAAGATTTGGATGCCGACTTTCATAGTTCGAGGACTGGCATGACACCCCTA
AACAATTCAGGGATCTAAGCACGCAATAACATTAA---------------------------------------------
-------GGGCTTGCAACAATT---------CATCGTGCA------------TGCAGGTGGTGTATTTGTGTCGGGACCC
CAAGGACTGCTTTGTGTCTCTCTGGCACTTTATGAGCAAGTTCACCCCA------CGGGACATCGACGAGGCACACGACC
AGTTCTGCAACGGCGCCTCATTGTATGAGCCGTTCTGGGAGCACGTGCTGAGCTACTGGCGGTGGCACATTGAGAGACCG
GGACAGGTGCTCTTCCTGACTTACGAGGAGCTCAATGCCAACCCGCTCGGCCAGCTGAGGCGCCTTGCTGAGTTCATCGG
GCGCCCCT-----TCAGGGGAGCAGGAGGCCGGAGTGGACAGGAAGATCACGGAGGCATGTGCCATGAAGAGCATGGTCA
ACCAGGAGGTGAACCAGTCGGGTACGACCGAAATAATTGAGATGCCGATGCCCAACGGGGTCTCCTTCCGGCGCGGCGTG
GTCGGAGACTGGACCAACTACCTCACGCCAGAGATGGCGGGAAGGATTGATGAGATTACCAAGAGCAAGTTCGAAGGAAC
CGGCCTCATGCTGCCCAAAACAATCTCGGAAATCCCAAAGATCTAACATTCCTAT---GTCGCAAATTGATGTTTGAAAT
CGTTTACCTTAATTTTCTTGCTCTTGTTGTAAACTGCACCC-GATGCCATTGGTTTGGCTGAATAAAAAAA-CTTGCAAT
GTTCTTGTTGATTAAACGGAATACCAGCTGGCAAGAAGTTGTTGTTACGGAAGAGGCCTACTTAGTCTTAGGTATTTTTC
ATATTGGTTTAATTGTGATCAAATATATTTGTACTCTGCTTAATTATTAATAAAAATGATTGTATGCATCGCAATAATGC
AGAGACCAAGGATTTCAACTGCATTTTCGAAAA-AAGAGAATGCTAACCAGCTCTGAATGAACTTCTACATGATTAAGCA
TGATGGCGCCACAAGCCAAAGGACGCCAAGACCAAGTTGTATAGTATTTTCCAGTTCAACAAAATAAGCGAATCAAAAGT
TTCAAATGATATGAGCACTGTGTTCATCGTGAACTAAAAAGT--AAACAATAGCACGACATCATATCTC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr6B_1003
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGCTAATCTCTTCCCACGTCACGCCGGCGTC
CCCGCGCCGGACGCCGACGAGGCAAAAGAAATCTATGACGAAGCTCGGAGAGTGGTGTCCACCTACGAGACCGTTCCCA-
-----GCGGAATCGTGGTTGATTACCACCGCCACCCCGACGGGTGGCATATGGCCCTGCCGGTGATGGTGAGCTCCATGG
TCGCACATCACCACTTCGAGGCCCGCGGGACCGATGTGCTCCTTGTTACCATCCCCAAGTCCGGGACCACCTGGATCAAG
GCTCTTCTCTACGCCGCCGCCCGCCGCACCGATGACGCATCGTTCG---TACTCCGGCAGCTCGCCTCCCACAACTCGCA
CCAGCTCGTTCCTTTCCTTTCCTCGAGACCCAGGTGTACACCAAGGACCAGATCCCCGACCTGAGCTCGCTTCCGGCGCC
ACGGCTCTTCGCCACGCACGTCCCGGCGGAGTCGCTGCCAGCTTCCGTTGTGGCGTCGGGTTGCAAGGTAGTAGGACTAT
GTTTGCTACCATGGTT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACAACATTATTACTAGTGGTTTATTGCAACAGTTTTTCTTTTTCTTTTTCTTTTT
GAGAACGTTTCTTGCAACAATTACAAATAGTAGTACTATATTATGTGTGGTGTGCAGGTGGTGTACTTGTGCCGGGACCC
CAAGGACTGTTTCGTGTCTCTCTGGCACTTTATGAACAAGCTGACCCCA------TGGGACATTGACGAGGCACACGGCC
GGTTCTGCGACGGCGTCTCGGTCTATGGGCCGTTCTGGGAGCATGTGCTAAGCTACTGGCGGTGGCACGTCGAGAGGCCG
GGTCAGGTGCTCTTCCTTACTTACGAGGAGCTCAGCGCCGACCCGCTTGGCCAGCTGAGGCGCCTTGCCGAGTTCATCGG
GCGCCCGTTCACGCCGGGAGAGCAGGAGGCCGGAATAGACAGGGAGATCGCGGAGGCATGCGCCATGAAGAGCATGGTCA
GTCGGGAGGTGAACCAGTCGGGGACGACCGAAATGACGGAGATGCCGATGCCCAACGGGATCTTTTTCCGACGCGGCGTG
GTCGGAGACTGGACCAACTACCTAACACCGGAAATGGCAACACGGATTGATGAGATTACCAAGAGCAAGTTCGAAGGATC
CGGCCTGATGCTGCCCGAAACGAACTCGAAAATCACAAAGATCTAGCATTCCTACATTGTTGCAT-TTGATGTTTTAAAT
CGTTCGCCATAATTTGGTCCCTCTTGTTGTAAACTGCAGACTGATGTCGCTGGCTTGCCTGAATAAAAAAAAATTACATT
ATT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr6B_1686
--------------------------------------------------------------------------------
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-ACAATTTAGGGATCTAAGCACGCAACAACATTAA---------------------------------------------
-------TGGCTTGCAACAATT---------CATCATGCA------------TGCAGGTGGTGTATTTGTGTCGGGACCC
CAAGGACTGCTTTGTGTCTCTCTGGCACTTTGTGAGAAAGTTCACCCCA------CGTGACATAGACGAGGCACACGACT
AGTTCTGCAATGGTGTCTCATTGTATGGGCCATTCTGGGAGCACGTGCTGAGCTACTGGCGGTGGCACGTTGAGAGACCG
GGATAGGTGCTCTTCCTGACTTACGAGGAGCTCAGCGCTGACCCTCTCGGCCAGCTGAGGCGCCTTGCCGAGTTCATCGA
GCGCCCCTTCACGCCAAGGGAGCATGAGGCCAGAGTGGACAGGGAGATTGCGGAGGCATGTGCCATGAAGAGCATGCTCA
ACCAGGAGGTGAACCAGTCGGGGATGACCGAAATCGCTGAGATGCAAATTCCCAACGGGATCTTCTTCAGGTGCGGTGTG
GTTGGAGGTTGGACCAACTACCTCATGCCAGAGATGGCGGGAAGGATTGATGAGATTACCAAGAGCAAGTTCGAAGGATC
CGGCCTCAGGCTGCCCAAAACAATCTCAAAAATCCCAA-GATCTAGCATTCCTAC---GTCGCAT-TTGATGTTTGAAAT
TGTTTACCTTAATTTTCTTGCTCTTGTTGTAAACTGCACCCTGCTGTCACTACCTTGGCTGAATAAAAAAATCTTGCATT
GTTCTTGTTGATC-AACGGAATACCAGTTGGCAAGAAGTTGTT---ACGGAAGAGGCCTACTTAGTATTAGGTGTT----
--------------------------------------------------------------------------------
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------------------------------------------------
>chr3D_1753
TGCAAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------GTGGTGTACCTGTGCCGGGACCC
CAAGGACTGCTTCGTGTCGCTCTGGCACTTCTGGAACAGGTTCGCGGCGTCGCCGTGGGACCTCGGCGAGGCGCTCCTGC
AGTTCTGCGACGGCGTTTCGCTGTTCGGGCCATTCTGGGAGCACGTGCTGGGCTACTGGCGCTGGCACGTGGAGAGGCCG
GAGCAGGTTCTCTTCCTGACCTACGAGGAGCTCGCCGCCGACACGGTCGGTCAGCTGAGGCGCCTCGCTGCGTTTGTCGG
GTGCCCGTTCACGGCAGAGGAGCGGGAAGCCAGGGTAGACAGGGAGATCGTGGAGGCATGCGCCATGGAGAGCCTGGCGG
GACTAGAGGTGAACCGGTCCGGGAAGACCGCCATGACCGAGACGTCAGTGGCGAACAACATATTCTTCCGGCGCGGTGTC
GTTGGCGACTGGCAGAACCACCTGACGCCGGAGATGGCGAGAAGGATCGATGAGATCACCGAGAGCAAGTTCAGAGGATC
GGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr3D_1753
TGCAAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------GTGGTGTACCTATGCCGGGACCC
CAAGGACTGCTTCGTGTCGCTCTGGCACTTCTGGAACCGGTTCGCGCCGTCGCCGTGGGACCTCGGCGAGGCGTTCCAGC
ACTTCTGCGACGGCGTCTCGCTGTTTGGGCCTTTCTGGGAGCACGCACTTGGCTACTGGCGCTGGCACGTGGAGAGGCCG
GAGCAGGTTCTCTTCCTGACCTACGAGGAGCTCGCCGCCGACACGATCGGCCAGCTGAGGCGCCTCGCGGAGTTTGTCGG
GCGCCCGTTCACGGCAGAGGAGCGGGAAGCCAGGGTGGACAGGGAGATCGTGGAGGCATGCGCCATGGAGAGCCTGGCGG
GACTGGAGGTGAACCGCTCCGGGAAGACCGCCATGATCGAGGACTCAGTGGCGAACAACATATTCTTCCGGCGCGGCGTC
GTTGGCGACTGGAAGAACCACCTGACGCCGGAGATGGCGAGAAGGATCGATGAGATCACCAAGAGCAAGTTCAGAGGATC
GGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr3B_1753
TGCAAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------GTGGTGTACCTGTGCCGGGACCC
CAAGGACTGCTTCGTGTCGCTCTGGCACTTCTGGAACCGGTTCGCGCCGTCGCCGTGGGACCTCGACGAGGCGCTCCAGC
AGTTCTGCGACGGCGTCTCGCTGTTCGGGCCTTTCTGGGAGCACGTGCTGGGCTACTGGCGCTGGCATGTGGAGAGGCCG
GAGCAGGTTCTCTTCCTGACCTACGAGGAGCTCGCCGCCGACACGCTCGGCCAGCTGAGGCGCCTCGCTGCGTTTCTCGG
GCGCCCGTTCACGTCAGAGGAGCGGGAAGCCAGGGTGGACAGGGAGATCGTGGAGGCATGCGCCATGGAGAGCCTGGCGG
GACTGGAGGTGAACCGCTCCGGGAAGACGGACATGACCGAGAACTCAGTGGCGAACAACATATTCTTCCGGCGCGGCGTC
GTTGGCGACTGGAAGAACCACCTGACGCAGGAGATGGCCAGAAGGATCGATGAGATCAGCGAGAGCAAGTTCAGAGGATC
GGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr3B_1753
TGCAAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GTGGTGTACCTGTGCCGGGACCC
CAAGGACTGCTTCGTGTCGCTCTGGCACTTCTGGAACCGGTTCGCGCCGTCGCCGTGGGACCTCGGTGAGGCGCTCCAGC
AGTTCTGCGACGGCGTCTCCCTGTTCGGGCCTTTCTGGGAGCACGTGCTGGGCTACTGGCGCTGGCATGTGGAGAGGCCG
GAGCAGGTTCTATTCCTGACCTACGAGGAGCTCGCCGCCGACACCCTCGGCCAGCTGAAGCGGCTCGCTGCGTTTCTCGG
GCGCCCGTTCACGTCAGAGGAGCGGGAAGCCAGGGTAGACAGGGAGATCGTGGAGGCATGCGCCATGGAGAGCCTGGCGG
GACTGGAGGTGAACCGCTCCGGGAAGACGGACATGACCGAGTCTTCAGTGGCGAACAACATATTCTTCCGGCGCGGCGTC
GTTGGCGACTGGAAGAACCACCTGACGCCGGAGATGGCTAGAAGGATCGATGAGATCACCGATAGCAAGTTCAGAGGATC
GGG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chrUn_2796
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GGAAAATCCTA
TATGCCGCTCGTTCCGTCAAACTGCCGGCGCTTCGCACAGGCGAGCGACCGAGCAGCGACGCAACGAGCCAGCCCGTTTA
ACCGCTCCAGCGCTTCCGGTTTTGGGAACCTTCTAGACGTTCCCAGCAGATTTTTTCCGGTTTTGGGAACCTTCTAGAAG
GTTCCTGAACCGGTTTTTTATTTTTCTTTATTTTTCTATTTATGTTTCGTTTTTCTTTTCA----------------TTT
TTCATTTTTTGTTTTTCAAGTTTATGTTTTCTTTTTCAAATAAATGTTCGCATTTTTGGAAAATGTTCGCACTATTACAA
AAATGTTCAAAATTTATAAAA-TGTTCGTGCTTTCAATTTTT-TTCATAAATTCAAAAACTGTATGCATTTTTCAAAAAT
TGTTC-GGAATTTTCAATAAATATTTGTGTGTTAACAAAA--------------TTGTTCAGAATGTTTTTGTTCAAAAT
TTTGACAACTTTTAAAAAATGTTCGGGATTTCAAAAAATGTTTCCGTT
>SNPs
S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----------------------------
S-----S----------------S-S------------------S--------S--------------------SS----
--------------------------S---------------------------------------S-------------
--------------------S------S----------------------------------------------------
--------------------------------------S---------S----------------------S-------S
SSSSS------------S-------------------S--------SS---S---------S------------------
--------------------------------------------------------------------------------
----------------------S------S-----------S--SSS---------------------------------
-----------------------------------------------------S--S-----------------S-----
---------------------------------------------------------S----------------------
---S-------SS-SSSSSS-----S-S-----SSSSS----S--S----S-----------S-S-S--S----S-----
-----S----S-------S-SS-SSS----SSSSSS--S-----------------------------------------
-----------------------------SSS----------S---S---------S-S---S--SS-S--------SS-
-------------S--S----SSS--------------------------------------------------------
---------------S---------S-SSSS-------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------------------S--------------------------S-----------SS-----
-----------------------------------------------------S-----------S-----------S--
------------------------------S--------------------------------------S----------
--------------------S----------------------------------------------------S------
-----------------------------------------------------------------------S--------
---------------S------------------S--------------S---S--------SS----------------
----------SS----------------------------------S------------------------S--------
------------------S-------------S--SS----S----------S------S--------------------
S---S-------------------S-S-------------------------------------------S-------S-
----S------SSS------S-------S----S--------S------S----S------S------------------
S--------------S---------------S----S-------------------------------------------
-----S--S--------S---------------S------SSSS---S--S-S----S-S--------------------
-----------S-S----------------------------------------------------SS-SSSS-S-----
----S----S----S---------------------SS---------S--------------------------------
------------------------S----S-----------S---S-S------S--S-SSSSSSSSSSSSSSSSSS---
--SS------------------------------------S---------SSS-S--S----------------------
--S------------S-----S----S---S------S----S-------------------------------------
-----S-----------S----------SSS-S--SSS--SSSSSSSSSSSSSS-------S------------------
S--S----S----------SSS-----------------S--S-----
>forward_390
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGCACCGTTGTTGTCACATT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------
>reverse_2230
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------AAGCATGGTCA
ACCAGGAGG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_606
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------TTTGAGTCAAGCCAGCCAGT----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_2450
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------CCCTCCGTCGTGTTTGATGT-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
