>input_sequence_55109
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----------------------------------------AGAGGATTGGAAAGTGTAGATTCCTTCATACCGAACAGCC
TAACATGCAACGATTCCTTAGGAACAAGTTTCCTTTGATTTTCCTTCGTTTTTCCTCCATCCCGAATAGGGCCTCACTAT
TCATATTGATTGTTTTCAGTGCTTCAAACTATGGATGGGGGTTTCTCTACTACTTCAGCGGCAGCTGTGTATGCTGATTG
CAATATCCTTATTTTTGGATTTGACCATGTGCTTGTTGATTATTGTAATAGGAAGAGTGACTATATACTTATATAGTGAC
TCATGAGCTTGCTAGGAATGCTTCGATTTCGACTAATATCTGTATGTGGACGATGACCCCTCTAGTTTTATTCCAGACTC
TCTAGAATGATGTAACCATTCTATCCTGATTCTACACCCAAAAAAAGCCCCCCATCATGATGACTTTCCCTAAAAACACA
CACACACAGTGCATCCATATGCCTGACCTATCAATTTATGGATTTGTTTCTAGCATGTAGCCTCTAGGCTGAACGTGCCT
TGATGCCCACAAGGCATACGCCCCCTTGATGGCCACACTAGCCTATGAGGGATTTAATGTCACCCCGC--AAAAAAAGGC
CACTTCTGAACTGGGCACGAGACAGT------------------------------------------------------
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--------------TTCTGGCTTCGCTGCAGGAATTTCTTGAGCCCCTGATTATCGGCGTCATTTTGAACCGCGCACCTG
CAAGTTTTAGGAGCTAACCGCTGCTAACAAAAAAGC--AAACTGTGCATCAGGGTA-------CGTACGCACAAGT----
AGCTCCGCCC----CCGGCGCATCGGTTCGTCGTTTTGCTAGAGAAGAAAACGGCAAAGGCCGTCCATCCCTGGCTCGAA
CCATTCGCCCACGAGCAAATGGAAGTTGTTTAATCCAGCCACTACGGGCGCGTCTCCATCGGCCGGCTGTGCGAGCGGAG
CCATGGCGCCCTTCATCGTGATCGGCCTGGTGCTCGGCCTGGACCTGCTCGCCTTCGTCCTCGCCATCGGCGGAGAGCTG
CCCCGGAGAGCGGTAAGCAAGCAGTAGTAGATATGCACATATGCTCACAGGCGTCAGGATTTTCTGATCGGGGAAAGTGC
AGGATTACGTGAACGTGTTGGTGTTCGACGACGACCCCGAGAGGCCCTTCTGCCTGTACGGGCTCGGCACGGAGGCGTCG
ACGTGGTATGGCCCCGGCGCGATCGTCCTGCTGATGGCGGGGCAGGCCGTGGCCATGGCGGCCACCCGGTGCTTCTGCTG
CGGCCGCCCGCTCTCGCCCGGCCGCTGGCGCTCCTTCTCCGGTCTCTTCTTCATCCTCTCCTGGTAA-------------
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>chr2A_1_TraesCS2A01G591800
ACAACACCTATTTTTTGGTGCCTCTATTTTCCATACAAATTTTACATTTTTTGTATACACCAGGAATATTTTCTATAGAC
ACATTTGAACATTTTAAAAATACAGTATTAATACTTTTTTAAACATATATGTTTTATGTTTTTTTCATTAACATTGTATC
TTTTTTGTGTACAGCAGAAACATTTTATATGTACATGTTTACATTTTACAAAAACAAGATTAACATTTTTGAAAACATAT
AGTTTTTTATGTCTACTTTTTCCATGTCAATTAATTTTTTTTGTATACATCAGGAAAAATTTTATGTACATGTTTAATAG
TGTTCAAATACATGATTAACATTTGTAAAACAAATATTTTTTTCATGTTTTTTTTTTCATACGCATTGTACATTTTTTGC
ATGGATTTTGTATACACTGAAAATATTTTTTCTATACATGATTAACATTTTTAAAATGCATTATTAACATTTTCCAAACA
TTATGAAAATTATTTTATTCCAACTCCGGGCCTCTTTGATTCATAGGATTTTGAAAACGTAGGAATAGGAAAAGTATAGC
ATTGGAGTGGCATGCCCACTTGAATCCTATAGGATTAGCAATGAGTGTTTGATGGCACAGGAAAAACTAAGGAATTGTAA
AAGAAGGTTGGAGTGGATGTTAGATTTCCTATGAAATGTAGTACAAAAGATTCCATAGAAAAATTCCTATGGGATTCAAT
CGTATGAATCAAACGACCAACATAGGAAAAAATCCTAAGGATTTCAATCCTCCAGAAATCCTATAAAATTCCTTTGAATC
AAATGAGCCCTCATATGGACCCCTCTAGTGATTTGACAATATTAACAGATCAACTATTGTCTTAATTCTTCCGTATGTGG
GCCCTGACATAGTACAGATTGAACCCCACATGGGTCCCAAGGTGCCTCGGGCCTGCACGAAAAATTTGACAGTGGTGAAT
GTTCGATTTCCCATGAAAACGCAGGGAGGAGAACCTATCCAGAGGATTGGAAAGTGTAGATTCCTTCATACCGAACAGCC
TAACATGCAACGATTCCTTAGGAACAAGTTTCCTTTGATTTTCCTTCGTTTTTCCTCCATCCCGAATAGGGCCTCACTAT
TCATATTGATTGTTTTCAGTGCTTCAAACTATGGATGGGGGTTTCTCTACTACTTCAGCGGCAGCTGTGTATGCTGATTG
CAATATCCTTATTTTTGGATTTGACCATGTGCTTGTTGATTATTGTAATAGGAAGAGTGACTATATACTTATATAGTGAC
TCATGAGCTTGCTAGGAATGCTTCGATTTCGACTAATATCTGTATGTGGACGATGACCCCTCTAGTTTTATTCCAGACTC
TCTAGAATGATGTAACCATTCTATCCTGATTCTACACCCAAAAAAAGCCCCCCATCATGATGACTTTCCCTAAAAACACA
CACACACAGTGCATCCATATGCCTGACCTATCAATTTATGGATTTGTTTCTAGCATGTAGCCTCTAGGCTGAACGTGCCT
TGATGCCCACAAGGCATACGCCCCCTTGATGGCCACACTAGCCTATGAGGGATTTAATGTCACCCCGC--AAAAAAAGGC
CACTTCTGAACTGGGCACGAGACAGT------------------------------------------------------
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--------------TTCTGGCTTCGCTGCAGGAATTTCTTGAGCCCCTGATTATCGGCGTCATTTTGAACCGCGCACCTG
CAAGTTTTAGGAGCTAACCGCTGCTAACAAAAAAGC--AAACTGTGCATCAGGGTA-------CGTACGCACAAGT----
AGCTCCGCCC----CCGGCGCATCGGTTCGTCGTTTTGCTAGAGAAGAAAACGGCAAAGGCCGTCCATCCCTGGCTCGAA
CCATTCGCCCACGAGCAAATGGAAGTTGTTTAATCCAGCCACTACGGGCGCGTCTCCATCGGCCGGCTGTGCGAGCGGAG
CCATGGCGCCCTTCATCGTGATCGGCCTGGTGCTCGGCCTGGACCTGCTCGCCTTCGTCCTCGCCATCGGCGGAGAGCTG
CCCCGGAGAGCGGTAAGCAAGCAGTAGTAGATATGCACATATGCTCACAGGCGTCAGGATTTTCTGATCGGGGAAAGTGC
AGGATTACGTGAACGTGTTGGTGTTCGACGACGACCCCGAGAGGCCCTTCTGCCTGTACGGGCTCGGCACGGAGGCGTCG
ACGTGGTATGGCCCCGGCGCGATCGTCCTGCTGATGGCGGGGCAGGCCGTGGCCATGGCGGCCACCCGGTGCTTCTGCTG
CGGCCGCCCGCTCTCGCCCGGCCGCTGGCGCTCCTTCTCCGGTCTCTTCTTCATCCTCTCCTGGTAATTAACCAACCAGT
TTTTTTCATTCACCGCTTCGTTGTTCTTCTATTTTCTTTTTACTGGCTTCTATCTATTATTCACTTGCATTCGCTACAAT
CGAAGTTTGACGGCCTCATCACGGCCCGATACTAGCCACACCGCCGCACACTGGTAGAAAAAAGGCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGA-----CCCCCCTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGC-CTTTAGTCCCGGTTCTTGTGGCTGACCGGG-CCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCATCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TGGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTTCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAACGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGCCCCCGATGGCTGCTGATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr2B_1482
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-----------------------------------------ATTTGTTTCTAGGATGTAGCATCTAGGCTGAACGGGCCT
TGATGCCCACAAGGCATACGCCCC-TTGATGGCCACGCTAGCCTATGAGGGATTTAATGTCACCCCGCCAAAAAAAAGGC
CACTTCTGAAATGTGCACGAGACAATTTCTGGCTTGGTGGCGGCTACAAATCATCCGGCTAACTAACCGTCCGATCTGGT
GCTGGTTGCCGTTTGATTTCACCAGCAGCTCGAATCTTCTCTCCTCTCATCCCGTTCAGTTCAACACCCCCGCGTGGGCC
GCGCCTATGTACTCCACTGCGGCAACGAGGCCGTGCTGCCGCGGCATGTGCACTCGCTGAAACGCAAGCCGGAGCTTCTC
CCTCAACTCCGGCGGCCGCTGCCGACGTGCTGCATTGCAACACCACTATTGATTGAGCAGCTCCCATGGCAGCCCCACAC
ACTAACTTCATGGCAGCGCTGCGCCGCTCCATTATAGCACCGGCGAAGCTTCAATGGCCCACGCCGCGCTTCATTGAAAC
TCCGGCAGGCTTCAATGCAACTCCGGCGGCGCTCGTTGCACCTTCGGCGGCGCTTCAGTGCAACTCCGACGGTCCCGCCG
ATGCTTCATCGCAACTCCGGCGAACCCCCACGTGCTTCACCGTCGAACCCCCGCTCTGCTTCATCGCAACGCCGGCGAGC
CCCCTCTGCTTCATCTGCTGCATGCAGCTCCCGCCGGCCATGGCAGCAGCTTCACCCTAGCCTTGCCTACAGCAGCGCGA
GGTGAGCGGAGACAGCCATATGCAGCAGCGGTGCAACTGACACTAGGTGACGGCGGTTTGTAGCGGCGGTGCAGCAACGC
GGTCGAGGTGATGGCGGCGGCGGTCTACAGCGACGGCGATGCGCTGGTGTGTGGTGCGGTGTGCTGGAGGAAGAAGAAAA
AGGAAGAAAAAAAAAAGAGTGGCTCAACGCAACTGAGGAAGAGATAAGGGAAAAGGAAAGGATAAGGGAGGGAGGAGACA
AGCGGCGTGTGGGGCTCATCGGGCGCTTGGCGCGCGTTGGAGTCCGACGGCTTACACAGACACAAAATCATCCGGTTTAT
TTAGAACGTTTGCCTTCTGGCTTTGCTGCAGGACTTTCTTGAGCCCATGATCGGCGTTT--ATTTTGAACTGCGCACCTG
CTAGTTCTAGGAGCTAACCGCTGCTAAGAAAAAAAGAAAAACTGTGCATCAGGGTAGAGGGTACGTACGCACAAGT----
AGCTCCGCCC----CCGGCGCATCGGTTCGTCGTTTTGCTAGGGAAGAAAACGGCAAAAGCCGTCCCTCCATGGCTCGAA
CCCTTCGCCCACGAGCAAATGAAACTTGTTTAATCCAGCCAGCACGGGCGTGTCTCCATCGGCCGGCTGGGCGAGCGGAG
CCATGGCGCCCTTCGTCGTGATCGGCCTGGTGCTCGGCCTGGACCTCCTCGCCTTCGTCCTCGCCATCGGCGGAGAGCTG
CCCCGGAGAGCGGTA-------AGTAATAAGTATGTACATATGCTCAGAAGCGTCGGGATTTTCTGATCGGGGAAAGTGC
AGGATTACGTGAACGTGTTGGTGTTCGACGACGACCCCGAGAGGCCGTTCTGCCTGTACGGGCTGGGCACGGAGGCGTCG
ACGTGGTATGGCCCCGGCGCGATCGTCCTGCTGATGGCGGGGCAGGCCGTGGCCATGGCCGCCACCCGGTGCTTCTGCTG
CGGCCGCGCGCTGTCGCCCGGCCGCTGGCGCTCCTTCTCCGGCCTCTTCTTCGTCCTCTCCTGGTAA-------------
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>chr2D_1740
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---------------------------------------------------GGGTA-------CGTACGCACAAGTTAGT
AGCTCCGCCCCTGGCCGGCGCATCGGCTCGTCGTTTTGCT-GAGAAGAAAACGGCAAAAGCCGTCCATCCATGGCTCGAA
CCCTTCGCCCACGAGCAAATGGAAGTTGTTTAATCCAGCCAGCACCGGCGTGTCTCCATCGGCCGGCTGTGCGAGCGGAG
CCATGGCGCCCTTCATCGTGATCGGCCTGGTGCTCGGCCTGGACCTCCTCGCCTTCGTCCTCGCCATCGGCGGAGAGCTG
CCTCGGAGAGCGGTAAGCCAGTACTAGTAGATATGTACGTATGCTCACAGGCGTCAGGATTTTCTGATCGAGGAAAATGC
AGGATTACGTGAACGTGTTGGTGTTCGACGACGACCCCGAGAGGCCGTTCTGCCTGTACGGGCAGGGCACGGAGGCGTCG
ACGTGGTATGGCCCCGGCGCGATCGTCCTGCTGATGGCGGGGCAGGCCGTGGCCATGGCCGCCACCCGGTGCTTCTGCTG
CGGCCGCCCGCTCTCGCCCGGCCGCTGGCGCTCCTTCTCCGGCCTCTTCTTCATCCTCTCCTGGTAATTAACAAACCAG-
----TTCATTCACCGCTTCGTTGTTCTTCTATTATTCACTTATTA---------------------GCATTCGCTACAAT
CGAAGTTTGATGGCCTCGTCACGGCCTGATACTAGCCGCACCGCCGCA--------------------------------
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>chr2A_2439
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---------------------------------------------GCACACTGGTAGAAAAAAGCCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGACCC-CCCCCCCTTTAGACGCGGCT
CTTACGGACCGCGACAAAAGC-CTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCATGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATGTTGTGTTTTATTTTATTT
TGGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTGATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr6A_2440
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----------------------------------------------CACACTGGTAGAAAAAAGCCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGACCCT--CCCCCTTTAGCCGCGGCT
CTTACGGACCGCGACTAAAGGGCTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TTGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTTATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chrUn_2440
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----------------------------------------------CACACTGGTAGAAAAAAGCCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGACTC-CCCCCCCTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGC-CTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TGGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACGAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTTATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCATCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr2A_2441
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-----------------------------------------------ACACTGGTAGAAAAAAGGCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGACCC-CCCCCCCTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGC-CTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACTTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TGGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGCACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTGATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr6A_2442
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------------------------------------------------CACTGGTAGAAAAAAGCCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGACCCCCCCCCCCTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGC-CTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TGGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTGATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr6A_2442
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------------------------------------------------CACTTGTAGAAAAAAGCCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGA-----CCCCCCTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGT-CTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TTGATGAAGTTTCTGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACTATA
TACAACTTCGAACAAGTTTCAATCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTTATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr6A_2442
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------------------------------------------------CACTTGTAGAAAAAAGCCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGA---CCCCCCCCTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGT-CTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TTGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCATGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCTGATGGCTGCTTATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr6A_2442
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------------------------------------------------CACTTGTAGAAAAAAGCCCTTTAGTCCCGGTT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGCGACTAAAGA----CCCCCCTTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGT-CTTTAGTCCCGGTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCTGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TTGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTCCAATCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAACATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTTATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>chr2A_2443
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-------------------------------------------------ACTGGTAGAAAAAAGCCCTTTAGTCCCGATT
CGCAACAGCCTTTAGTCCCGGCTGTGCAACCGGGACTAAATAAGCGTGACTAAAGA----CCCCTCCTTTAGCCGCGGCT
CTTACGGACCGCGACAAAAGC-CTTTAGTCCTGCTTCTTGTGGCTGACCGGGACCAAAGGCCCGCCACGTGGGCGCCCGT
GGTCCGTCGGGGCCGAGGACCTTTAGTCCCGGCTCTCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTT
TTAGCCCCCCTAAACCTGGTTTCTTTTTAATTTGTAGTGTTTTATTTGTTTTATATTTTATTTTGTGTTTTATTTTATTT
TGGATGAAGTTTCAGTACACATATTCTACGCTTCTATATACATGCATATGAAATTTCAAACAAGAAGAATTCAAGAGGAA
TATATAATATATATTCAATCTCGGGTGACCATATACAACTTCGAACAAGTTTCCATACACAATTAGGATGGATGACCATA
TACAACTTCGAACAAGTTTCAACCTCGGGTATGCATATAAATTTCTTCGTCCTCGGTATAGTGTTGTCCTTTAGGATTGA
TGACTTCCCTCATGAAAAATCCTGCTAATTCTTCTTGAATTGGTCGGAAGCGAGCTTCTGGACTAAGCCTCCTCCGCAAG
TTATCCGTCGCGTTCCGCACGCTAGCTGATGCCTTCCGCTCAGTGGTTTGTCTCCGGATGTTCTCACAAATATAGTATCC
ACATAGATCGGTCCCCGATGGCTGCTTATCCACATTAACTAACTTTCTGAAATCTAGCTCATGTTTGAATTCACCGACAG
TTTCTTCTGAGAACCGTCTCCAAACCCTACAGGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-------S-------------S----
------------------------S-----------S-------------------------------------------
----------S--S----------S-------------------------------------------------------
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-----------------------S---------S------------S----SSS--SSSSS---------S---------
-S----S--------------------S------SS--------------------------------------------
----------------------------------------------------------S-----------S---------
--S--------------------------------------SS-------S-----------------------------
----------------------------------------------S---------------------------------
------------------S--S-------------S--------------------------------------------
----------------------------------------------S-----------------S---------------
-----------------------------------------------------------S--------------------
------------------------------------------S-----------------------------S------S
SSSS-----------------------------S-SSSS---S-SSSSSSSSSSSSSSSSSSSSSS--------------
----------S------S--------S----------S------------------------------------------
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-----S--------------------------------------------------------------------------
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----------------------------------------------------S---------------------------
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-------------------------------------------------S------------------------------
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-----------S--------------------------------------------------------------------
----------------------------------
>forward_520
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--------------------CAACTCCGGGCCTCTTTGAT----------------------------------------
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>reverse_1611
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----------CTGGGCACGAGACAGTTTCT--------------------------------------------------
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----------------------------------
>forward_1049
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---------------------------------------------------------------------ACCGAACAGCC
TAACATGCA-----------------------------------------------------------------------
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----------------------------------
>reverse_2996
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-----------------------------------CACATATGCTCACAGGCGTC-------------------------
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----------------------------------
>forward_2618
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--------------------------------------TTGAGCCCCTGATTATCGGC----------------------
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----------------------------------
>reverse_4050
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-------------------------------------------------ACGAGCTTCTGGACTAAGCC-----------
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----------------------------------
