>input_sequence_55095
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---------------ATGTGTTGCTTCTGGACCATGGACACGGCGCCGGTCTGCCTCGACCTCATGGTCGGGCGTCCCAT
GGACCACGAGCCGTCTCGGGCGAGATGCACCGGAACAAGAACCGAGGCCAACGTTGCTAGCTCGGCCTGTGGCAGAGCAC
CTTCCA------TGACCAACGACGAGGTACTTACCCGCCCGATC--------------CTTCCCCACTCC----------
--GTCTCGTGCATTGTCT-CAATGAGGTGCTGACCTGAGCGTGCCA-------ATTTCCAGGC---TAAGATCCTGGAGG
CGAAGCTGGCGCAGGTGAGCGAGGAGAACCGGAAGCTGACTGAAATGATTGCCTACCTGTACGGCAACCAGG------TC
TCGCGCCAGAGCCCCGACGGCGAGGGCCAGCCGCGCGCCAGCACGGCAGCGTCGCCGACGCCCCCGGCGAGCAAGAAGAG
GAGCCGGGACAGCATGGACACCTCCCATTCTTGCGATGTGGAAATTAGCAACAGGAACGTAGGCACGGGCGAGGCCGAAC
ATGTCGATGTGGACAGCCCTCTGAGCAATGGCACTTGCCGGAGAATCAAGGTCAAGAAGGTCTGCACCAGGATCGACCCA
TCGGACACGAGCCTCGTAAGTGCCAAAT-------------------------------------CACTGGTCAAAGCAT
TTTTCAACGGATGAACGAACTGCAACAGTACAAATTGATACCAAAATCGGTGGCATCTGTAGGTTGTGAAAGATGGATAT
CAATGGCGGAAGTACGGGCAGAAGGTGACACGGGACAACCCGTCCCCAAGGGCCTACTTCCGATGCGCCTTCGCACCGTC
CTGCCGTGTCAAGAAGAAGGTACCGTGCGAATCCCGTCCAATTCGCCGAGCATTGTGCAGCACCACCATTTACAGTCACA
GCAATCCATTACTGAAAAGCTCATGCTCTGGTCCGTCGCTAATTTCTTGCTGCGATGATCCATGGTGGTGCAGGTCCAGA
GAAGCGCGGAGGACAGCTCGGTGGTGGAGGCGACGTACGAGGGCGAGCACAACCACCCGCACCCCACGCGGGCCGGCGAG
CTGCCGAGCTGCGCCACGCAGGGCGGCGGCTCGGTGCCGTGCTCCATCTCCATCAACTCCTCCGGTCCGACCATCACGCT
GGACCTCACCAAGAACGGGGGAGGCGTGCAGGTCGTCGATGCCGGGGAGGCGCAACCGGACATGAAGAAGGTGTGTCGGG
AGGTCGCGTCGCCAGAATTCCAGAGGGCGTTGGTGGAGCAGATGGCCCGCGAGCTCACCGGCGACCAAAAGTTCACCGAC
GCGCTCGCCGCGGCGATCCTGCGGAAGCTGCCGGATTATTAG--------------------------------------
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>chr5D_1_TraesCS5D01G232800
ATATAAAGTACTTTTAGAGAAGTTTCGACATAAAGAAACAACAGGG------ACGCACGGCGCGTCCAGCCTGACAGCCA
CCACCCGCGGTAGCTCTCTTCTCCTCCTTTTAGCGGTCGTGCGAGGGTCACGGCGTACATGACAGAGCAAAGAAAACCCA
AAGAGATTAAAACTATTTTTTTAGGATCGAGATTAAAACTAATTGCAAGGTAGTACTGGTACAGGT-AGGAGTGACAAGA
GAATCAACTGAATCTTTCGCCAAAATAAAAAAAGAATCAACATGATCAACTGTATAATAATTGTTACCAAAATA--GGGG
GTGGGGGTACTAGTTAGTGATCACGCAACAGTAGTGGTTCGTACAACTTTCTTCCTCCGTTCTCCCGGCACAAAAACAAT
CTGAACAA---GTCATTCAAAGTGAGGCCCGTTCGCTCTGACTAATAA--------------------------------
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-CTCTCCCGGAGCTGTAGAGAAAGTACCGCACTTTTCCGTTGAC-AAAAGATAAGATGTTCTTTTTCTAGGGCTGGAGCT
TTGGAATGGCACCCATCTCGTGGAAAACATGCCGGTCGGAGATGGAATTTGGACGGAGGAGTACTC-----TTTTCTCTC
GTACACATCTGGAAGTGTGATCGCATAGTACGCGCATCTCAATCCATGTGATTTGGTGCATAGTATACC----CCTGCAC
CAGATTCATCCGAGGACCGCGAGGCCGACTTCATTGATTACAGTGCTAG-------------------------ACTATT
CTGCAGCTTGTTCCGTCAGCCATGACGCGAATCGTGACCTCGCCCCCTTCAATAATGTATGACGTAACCGGAGGCGATAT
CAGCGTGACCTCAGGCTGCAGATCCAATGG----------------------------ACGCGCCGGCCAGACCAGACTA
CCGCTTCTCG--------GCTGCGTAACCGATTTCCCACGTCCCCCATATCCCCGC------------------TATATA
TCACCCGCGCTCCTTGCCTATTCTCAAA-CATTCAAGCGTCCTCTGCTCGTGCTTGATTCTTCTACCTCCAGCCAGAACA
GTCGCAGAGGCGTGCATGTGTTGCTTCTGGACCATGGACACGGCGCCGGTCTGCCTCGACCTCATGGTCGGGCGTCCCAT
GGACCACGAGCCGTCTCGGGCGAGATGCACCGGAACAAGAACCGAGGCCAACGTTGCTAGCTCGGCCTGTGGCAGAGCAC
CTTCCA------TGACCAACGACGAGGTACTTACCCGCCCGATC--------------CTTCCCCACTCC----------
--GTCTCGTGCATTGTCT-CAATGAGGTGCTGACCTGAGCGTGCCA-------ATTTCCAGGC---TAAGATCCTGGAGG
CGAAGCTGGCGCAGGTGAGCGAGGAGAACCGGAAGCTGACTGAAATGATTGCCTACCTGTACGGCAACCAGG------TC
TCGCGCCAGAGCCCCGACGGCGAGGGCCAGCCGCGCGCCAGCACGGCAGCGTCGCCGACGCCCCCGGCGAGCAAGAAGAG
GAGCCGGGACAGCATGGACACCTCCCATTCTTGCGATGTGGAAATTAGCAACAGGAACGTAGGCACGGGCGAGGCCGAAC
ATGTCGATGTGGACAGCCCTCTGAGCAATGGCACTTGCCGGAGAATCAAGGTCAAGAAGGTCTGCACCAGGATCGACCCA
TCGGACACGAGCCTCGTAAGTGCCAAAT-------------------------------------CACTGGTCAAAGCAT
TTTTCAACGGATGAACGAACTGCAACAGTACAAATTGATACCAAAATCGGTGGCATCTGTAGGTTGTGAAAGATGGATAT
CAATGGCGGAAGTACGGGCAGAAGGTGACACGGGACAACCCGTCCCCAAGGGCCTACTTCCGATGCGCCTTCGCACCGTC
CTGCCGTGTCAAGAAGAAGGTACCGTGCGAATCCCGTCCAATTCGCCGAGCATTGTGCAGCACCACCATTTACAGTCACA
GCAATCCATTACTGAAAAGCTCATGCTCTGGTCCGTCGCTAATTTCTTGCTGCGATGATCCATGGTGGTGCAGGTCCAGA
GAAGCGCGGAGGACAGCTCGGTGGTGGAGGCGACGTACGAGGGCGAGCACAACCACCCGCACCCCACGCGGGCCGGCGAG
CTGCCGAGCTGCGCCACGCAGGGCGGCGGCTCGGTGCCGTGCTCCATCTCCATCAACTCCTCCGGTCCGACCATCACGCT
GGACCTCACCAAGAACGGGGGAGGCGTGCAGGTCGTCGATGCCGGGGAGGCGCAACCGGACATGAAGAAGGTGTGTCGGG
AGGTCGCGTCGCCAGAATTCCAGAGGGCGTTGGTGGAGCAGATGGCCCGCGAGCTCACCGGCGACCAAAAGTTCACCGAC
GCGCTCGCCGCGGCGATCCTGCGGAAGCTGCCGGATTATTAGCATAACTAATTATAGAGACTACGCGAA---CTTCAGAA
ACTTTCTAATTTTGTAGCATTTGGAACACTAA-GGCTGAC----------------------------------------
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----GTAGTACAAAATTTCATC----TACAATATTGAAATCGATTACAGACATTTTTACAATATATTAAAACCCATAGGC
CATAGCTGATCACAAGCTCATCGGCTTAC-GGGTAGACACTAAATTCCAATAAAATAGCAAAAAAAATCTAAAATTTTCA
TACATCAAAGATGAACAAATTTTCTATGTGCGTGCAAAATTGAATGACAATATGACATTGGGGAGCTCGGGGCAGAAAAA
ACAGAATCGGTTCTCCAAAATAAAAAAAATTGAACATTTCTTAAGACTTTGATTTAGTTTTGTCGAGAGCTCTTGTGATG
TCATATCGTCATAAAGTTTCGCGCATCTAGAAACTTGTGCACCATTGGTGCCAAAAA-CAATATTTTTTTGCTA----TA
TTTTTTCATTTTATTGTTCACCCACAGAAGCAGATGCTC-----------------CTGTGCATCGAAACGCCATACTCA
ACATCAAA------------------------------------------------------------------------
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----------------------------ATATCACATCTTCTAATAGTAATTCCAAGATCAACTCTTGTAGAGTCGATAA
CACACCCTCCGTACATAATGACCGTCGCCGATACGAAGACTAGACGGGTAAAAAAACACTCGTAATTTTT----------
------------------------------TCTAGCCGCCCGCGGCT---AAGACTCGGCCGCGACACGTCTTAGGGCA-
-TCGTTTCCTCCCCACCTCGTCCCTAAATTCAACGCTAACATAACCCATCCTTGCCACGCCATGGACTAGTTGAGCCGCC
TCGTGTCGTCACAGGTGGCGCTGGTCGGCGGTGCTTCATTTTCCCACATCGCCGTAGCCTCATCCTTGGGACCCACGTCG
ATGGGTGGCTGTCCTCCCCCCTTGTCCTTGGAGTTTCGAGAACTTGTGATTTAGTAGTCCATGTCCTCAACTCTGACATG
TTGGATTTTGAGGTTGACTTTGACTCCGACATTAGCGAGCTCAACCCCTTCCCATCCCCCCT
>chr5B_1
ATATAAAGTACTTTTAGAGAAGTTTCGACATAAAGAAAAAACGGTG------ACGCGCGGCGCGTCTAGC---ACAGCCA
CCACCCA---------TCTTCTCCTCCTTTTAGCGGTCGTGCGAGGGTCATGG-GTACACGACAAAGCAAAGAAAACCCA
AAGAGATTAAAACT--------------------------AATTGCAAGGTACTACTAGTACAGGTCAGGCGTGACAAGA
GAATCAACTGAATAATTCGCTAAAATAAAAAA--AATTAACATAATCAACTGTATAATAATTATTACAAGAATAGAGGGG
GTGGGGCCGTGGGGGCTAG-------------------------------------CCGTTCTCTCTACACAAAAACAAT
CTGAACA---GGTCATTCAAAGTAAGGCCTGTTCCCTCTGACTAATAAGGGCCTTTTTGGATTGAAGGATTTTCATAGGA
ATATTGGAGGATTCCAATTCATTGGATTTTTTCCTAAAGAAGCCCTTTGGATCAAAGGAACCACACCTCCAAAATTCCTA
TGGATGCATTCCTACACCTCAATCCTATAGGAATTTCAACATCCACTATAATCTCTTTTTTACACTGATTCGCGTAGGAT
CGAGGCACTTTTCCTGTGTTTTTCCTGTGTTCCATCCAAATGACCATTTTTGTAGTTTTCCTCTATTTTGTAAACCTCTG
TTTTGCACCTACAATCCCGTCAAATTCCTGTGTTTTTTGAATTCCTTTGTTTTCTAATCCTGTGATCCAAAGAAGCCCTA
ACTCTCCCAGAGCTGTAGAGAAAGTACCGCACTTTTCCGTTGACAAAAAGATAAAATGTTATTTTTCTAGGGCTCGAGCT
TTGGCAT-----CCATCTCGTGGAAAACATGCCGGCCGGAGATGGAATCTGGAT---GGAGTACTC-----TTTTCTCTC
ATACACATCTCCAAGTGTGATCGCATAGTACGCGCATCTCAATCCATGTGATTTGGTGCATACTAGTACTCCTCCTGCAC
CAGATTCATCCGAGGACCGCGAGGCCCACTTCATTAATTGCAGTACTAG-------------------------ACTATT
CTGCAGCTTGTTCCGTCAGCCATGACGCGAATCGTGACCTCGCCCCCTTCAATAATGGATGACGTAGCCGGAGGCGATAT
CAGCGTGACCTCAGGCGGCAGATCGAATGGACGCGCGCGAAGCCCCTTCCCAAGTCTAACGAGCCGGCCAGACCAGACTA
CCGCTCA----------AGCTGCGTCACCGATCTCCCGCGTCCCGATCCCACCTGTCTCCCAAATCCGCCGG--TATATA
TCACCCGCGCCCTTTGCCTATTCTCAAA-CATTCAAGCGTCCTCCGCTCGTGCTTCATTCTTCTACCTCCAGCCAGAACA
GTCGCAGAGGCGTGCATGTGTTGCTTCTGGACCATGGGCACGGCGCCGGTCTGCCTCGACCTCATGGTCGGGCGTCCCAT
GGACCACGAGCCCTCTCCGGTGAGGTGCACCGGCGTGAGAACCGAGGCCGACGTTGCTAGCTCGGCCTGTGACAGAGCAC
CTCCCA------TGACCAACGACGAGGTACTTAAT----CGATC--------------GTTTCCCACTCC----------
--GTCTCTTGCATTGCTTCCAACGAGGTGCTGATCAGATCGTGCCA-------ATTTCCAGGC---TAAGATCCTGGAGG
CGAAGCTGGCGCAGGTGAGCGAGGAGAACCGGAAGCTGACTGAAATGATCGCCTACCTGTACGGCAACCAGG------TC
TCGCGCCAGAGCCCCGACGGCGAGGGCCAGCAGCGCGCCCGCACGGCCGCGTCGCCGACGCCGCCGGCAGGCAAGAAGAG
GAGCCAGGAGAGCATGGACGCCTCGCATTCTTGCGATGTGGAAATTAGCAACAGGAACGTAGGCACGGGCGAGGCCGAGC
ATGTCGATGTGGACAGCCCGCTGAGCAACGGCACTTGCCGGAGAATCAAGGTCAAGAAGGTCTGCACCCGGATCGACCCA
TCGGACACGAGCCTCGTAAGTGCCAAATTGATCATCAAACGTAGTTCAAACCCCAATGGATCCTCCACTGATCAAAGTAT
TAATGGAACT--------------------------------------GGTGGCATCTGTAGGTGGTGAAAGATGGGTAT
CAATGGCGGAAGTACGGGCAGAAGGTGACACGGGACAACCCGTCCCCAAGGGCCTACTTCCGATGCGCCTTCGCGCCTTC
CTGCCCTGTCAAGAAGA---------------------------------------------------------------
-----------------------------------------------------------------------AGGTGCAGA
GGAGCGCGGAGGACAGCTCGGTGGTGGAGGCGACGTACGAGGGCGAGCACAACCACCCGCACCCCACGCGGGCCGGCGAG
CTGCCGAGCTACGCGGCGCGGAGCGGCGGCTCGGTGCCGTGCTCCATCTCCACCAACTCCTCCGGCCCAACAATCACGCT
GGACCTCACCAAGAACGGGGGAGGCGTGCAGGTCTTGGATGCGGGGGAGGCGCAGCCGGACATGAAGAAGGTGTGTCGGG
CGGTCGCGTCCCCAGAATTCCAGAGGGCGTTGGTGGAGCAGATGGCTCGCGAGCTCACCGGCGACCAAAAGTTTACCGAC
GCGCTCGCCGCGGCGATCTTGCGGAAGCTGCCGGATTATTAGCGTAACA----ATAGAGACTACGCGAA---CTTCAGAA
ACTTCA-AATTTTGTAGCATTTGGAACACTAAAAGGCTGACGTACTCCCTTCATTTTTTATACAAGGCCACAAACTCGGA
TTACAGATACCAATGTACTTTACAAGTCAACTTTTCTTCTTGTTTATTGGGATCATTAATACTTCATATGCATGCAAAGA
AACTGAGTGGAGGAAGTAGCTGTGATTATGATTGCATGCATGCAAGTATTAAACATGTTGTTAGTACGAGAAAATATATT
AACTTTGCCTCGATTACTGTTGATGGCCTTGTATAGATGCAAAATGTATATTTCATAGTGGCCTTGTATATAAAAATGGA
GGGAGTAGTAC-AAATTTCGTC----TATAATATTGAAATCCATTACAGTCATTTT-ACAATATATTGAAAAC------C
CAAAGCTGATCACAAGCTCATCGGCTTACAGGGTAGACGCTAAATTCCAACAAAATAGTCAAAAAAATCTAAAATTTTCA
TACATCAAAGATGAACAAATTTTCTATGTGCATG-------------CAATATGACATTGGGGAGCTCGGGGCAGAAAAA
-CAAAATAGCTCCTCCAAAATAAAAAAT-TTGAACATTTCTTAAGACTTTGATT-ATTTTTGTCGAGAGCTCTTCTGACA
TCATATCGTCAAGAAGTTTCGCGCACCTAGAAACTTGTGCACCATTGGTACCAAAAAACAATATTTTTT---TA----TA
TTTTTTCATTTTATTGTTCA-----------------TC-----------------TTGTGCACCGAAACGCCATACTCA
ACATCAGAATATCACATTGGAATGGCTTTACACACGACACAGACTGCACGATCTCTGAACGATAACATTGTGCATGCATC
AGTAAAGAGAAAAAACAATTGCCTCCTGCATGTACGCGTGCTGCTGGCGCTGCCACATGTGATCGTGCACGCATCGGCTG
TAATTTCGTCGTCTGTATAGCAGCTCTCATATCACATCTTCTAATAATAATTCCAAGATCAACTCTAGTAGAGTCGATAA
CACCCCCTCCTTACATAATGACCATCGCCTATACGAAGACTAGACGGGTAAAGAAACACTCGGAATTTTTTTTCCAGCCC
GCTCTCCCTTCGTTTCATGTCACCCTTGTTTCTCGCCACCCGCGGCTATAAAGACTCGGCCGCGACACGTCTTAGGGCAC
ATTGTTTTCTCCCCACCTCGTCCCTAAATTCAATGCAAACGTAACCCATCCTTGCCATGCCATGGACTAGTTGAGCCGCC
TTGTGTCATCACAGGTGACACTGGTCGGCGATGCTTCATTTTCACACATCGCCATAGCCTCATGCTTGGGACCCACGCCG
ATGGGTGGCTGTCCTTCCCCCTTGCCCTTGGAGTTTCGAGAACTTGTGATTTAGTAGTCCATGTCCTCAACTCTGACATA
TTGGATTTGGAGGTTGACTTTGACTCCGACATTAGCGAGCTCAACCCCTTCCCATCCCCCCT
>chr5A_14
-------------TTACAAAAGTTTCAACATAAAGAAACAAGGGTGACGCCCACGCGCGGCGCGTCTAGCCTGACAGCCA
CCACCCGCGTTAGCTCTCTCCTCCTCCTTTTAGCGGTCATGCGAGGGTCACGGCGTACACGACAAAGCAAAGAAAACCCA
AAGAGATTAGAACT--------------------------AATTGCAAGGTAGTACTGC-ACAGGTCAGGCGTGACAAGA
GAATCAACTGAATCTTTCGCCAAAATAAAAAAAGAATCAACATGATCAACTGTATAATAATTGTTACAAAAATAGTGTTC
---------------------------------------CGTACAACTTTCTTCCTCCGTTCTCTCGGCACAAAAACAAT
CTGAACAACAGGTCATTCAAATTAAGGCCCGTTCGCTCTGACTAATAA--------------------------------
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-CTCTCCCGGAGCTGTAGAGAAAGTAGCGCACTTTTCCGTTGACAAAAGATA--GATGTTCTTTTTCTAGGGCTCGAGCT
TTGGCAT-----CCATCTCGTGGAAAACATGCCGGCCGGGGATGGAATTTGGAT---GGATGGAGTACTCTTTTTCTCTC
ACACGCATCTCCAAGTGTGATCGCATGGTACGCGCATCTCAATCCATGTGATTTGGTGCATAGTA------CTCCTGCAC
CAGATTCATCCCAGGACCGCGAGGCCGACTTCATTAATGGCAGTACTAGTACTCCATTAATGGTAGTACGTACTACTATT
CTGCAGCTTGGTCCGTCAGCCATGACGCGAATCGTGACCTCGCCCCCTTCAATAATGGATGACGTAACCGGAGGCGATA-
CAGCGTGACCTCAGGCTGCAGATCCAATGG----------------------------ACGAGCCGGCCAGACCAGACCA
CCGCTACCGCTCTCTCGAGCTGCGTCGCCGATGTCCCACGTCGCAATCCAACGTGTCCCCCAAATCCCCCGCTATATATA
TCGCCCGCGCCCATTGCCAGTTCTCAAAACATTCAAGTGTCCTCTGCTCGTGCTTGATTCTCCTACCTCCGACCAGAACA
GTCGCAGGGGCGTGCATGTGTTGCTTCTGGACCATGGACACGGCGCCGGTCTGCCTCGACCTCATGGTCGGCCGTCCCAT
GGACCGCGAGCCGTCTCTGGCGAGGTGCACCGGAAGCAGAACCGAAGCCGGCATTGCTAGCTCGGCCTGTAGCAGAGCAC
CTTCCA------TGACCAACGACGAGGTACTTACCCGCCCGATC--------------CTTTCCCACTCC----------
--GTCTCGTGCATTGCCT-CAACGAGGTGCTGACCTGACCGTGCCA-------ATTTCCAGGC---TAAGATCCTGGAGG
CGAAGCTGACGCAGGTGAGCGAGGAGAACCGGAGGCTCACGGAGATGATCGCCTACCTTTACGGCAACAAGG------TC
GCGCGCCAGAGCCCCGACGGCGAGGGCCAGCAGCCCGCCAGCACGGCCGGGTCGCCCACGCCGCCGGCGGGGAGAAAGAG
GAGCCGGGACAGCATGGACGCCTCGCATTCTTGCGATGTGGAAATTAGCAACAGGAACGTAGGCACGGGCGAGGCCGAGC
ATGTCGATGTGGACAGCCCGCTGAGCAACGGCACTTGCCGGAGAATCAAGGTCAAGAAGGTCTGCACCAGGATCGACCCA
TCGGACACGAGCCTCGTAAGTGTCAAATTGATCATCAAACGCAGTCCAAACCCCAATGGATCGTCCACCGATCAAAGTAT
TAATGGAAGT--------------------------------------GGTGGCATCTGTAGGTGGTGAAAGATGGGTAT
CAATGGCGGAAGTACGGGCAGAAGGTGACACGGGACAACCCGTCCCCAAGGGCCTACTTCCGATGCGCCTTCGCGCCTTC
CTGCCCTGTCAAGAAGA---------------------------------------------------------------
-----------------------------------------------------------------------AGGTGCAGA
GGAGCGCGGAGGACAGCTCGGTGGTGGAGGCGACGTACGAGGGCGAGCACAACCACCCGCGCCCCACGCGGGCCGGCGAG
CTGCCGGGCTGCACCACGCAGGGCGGCGGCTCGGTGCCGTGCTCCATCTCCATCAACTCCTCCGGCCCGACCATCACGCT
GGACCTCACCAAGAACGGGGGAGGCGTGCAGGTCTTGGATGCGGGGGAGGCGCAGCCGGACATGAAGAAGGTGTGCCGGG
AGGTCGCGTCGCCAGAATTCCAGAGGGCGTTGGTGGAGCAGATGGCCCGCGAGCTCACCGGCGACCAAAAGTTCACCGAC
GCACTCGCCGCGGCGATCCTGCGGAAGCTGCCGGATTATTAGCATAACTAATTATAGAGACTACGCGAA---CTTCAGAA
ACTTCCTAATTTTGTAGCATTTGGAACACTAAAGGCTGAC----------------------------------------
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----GTAGTAC-AAAATTTCATCTAGTACAACATTGAATTCGATTACAGACATTTTTACAATATATTAAAACCCATAGGC
CATGGCTGATCACAAGCTCATCGGCTTAC-GGGTAGACACTAAATTCCAATAAAATAGCAAAAAAA-TCTAAAATTTTCA
TACATCAAAGATGAACAAATTTTCTATGCGCGTGCAAAACTGAATGACAATATGACATTGGGGAGCTTGGGGCAGAAAAA
ACAAAATCGGTCCTTCAAAATAAAAAAA-TTGAACATTTCTTAAGACTTTGATTTATTTTTGTCGAGAGCTCTTGTGATG
TCATATCGCCATGAAGTTTCGCACACCTAG-AACTTGTGCACCATTGGTGCCAAAAAACAATATATTTT---TTGCTGTA
TTTTTTCATTTTATTGTTCA-----------------TCCACAGAAGCAGATGCTCTTGTGCACCGAAACGCCATATTCA
ACATCAAAATATCACA----------------------------------------------------------------
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------------------------------------TCTTCTAATAGTAATTCCAAGAGTAACTCTAGTAGAGTCGATAA
CACCCCCTTCGTACATAATGACCATCGCCGATACGAAGACTAGACGGGTAAAAAAACACTCGGAAA-TTTTTTCCAGCCC
GCTC--CCTTCGTTTCATGTCACCCTTGTTTCTCACCGCCCGCGGCTATAAAGACTTGGCCACGACACGTCTTAGGGCAC
ATCGTTTCCTCCCCACCTCGTCCCTAAATTCAACGCTAACGTAACCCATCCTTGCCACGCCATGGACTAGTTGAGCCGCC
TCGTGTCGTCACAGGTGGCGTTGGCCGGCGGTGCTTCATTCTCCCACATCACCATAGCCTCATCCTTGGGACCCACGCCG
ATGGGTGGCTGTCCTCCCCCCTTGTCCTTGGAGTTTAGAGAACTTGTGATTTAGTAGTCCATGTCCTCAACTCTAACATA
TTGGATTTTGAGGCTGACTTTGACTCCGGCATTATCGAGCTCAACCCCTTCCCATCCCCC--
>chr5D_1029
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-------------------------------------------CGCCGGTCTGCCTCGACCTCATGGTCGGGCTTCCCAT
GGTCCGCGAGCCGTCTCCGGCGAGGTGCGCCGGAATGAGAGCCGACGCTGGCATTGTTGGCTCGGCCTGTGGCAGAGCAG
CTTCCACCACCATGACCAACGGCGAGGTATGCAACCGTTCAACCACACTCTGTT-------TTTTTTGGCTTTATCGAAA
AAATCTCTTGCTTTTCCCTCGACGTGCTGGATTTGATCTTGGAAATGTGGGGGATTTCCAGGC---TAAAATCCTGGAGG
CCAAGTTCACGGAGGTGAGCGAGGAGAACCGGAGGTTGACAGAGATGATCGGTTACCTGTACGCTAATAACCAGAACTTC
GCGCGACAGGGCCCCGAAGGCGAGGGCGAGCAGCCCGCGAGTACAGCCGCGTCGCCGACATCGCCGGTGGGCAAGAAAAG
GGGCAGGGAGAGCATGGAGACGTCGGATTCCGGCGATGCCAAC---AGCGACAAGAAGATAAACATGGTCGAGGCCGAGC
ATGTCGACGTCAAGAGCCCGCTGAGCAACGGCACTTGCCGGAGAATCAAGGTCAAGAGGGTCTGCACCAGGATCGACCCA
TCGGACACGAGCCTCGTAAGTCCAAATCG----ATCAAAGCTAGCTAAAACCCC---------TCCACTGTTCGAAACAA
TCGTC--------GACTAATTGCAACTGTAC----TGATACTGAAACCTGTGGCATCTGAAGGTTGTGAAAGACGGGTAT
CAATGGCGGAAGTACGGACAGAAGGTGACACGGGATAATCCCTCCCCCCGAGCCTACTTCCGATGCGCCTTCGCGCCGTC
CTGCCCTGTCAAGAAGAAGGTATCCTACAAACTCCGCCCAATTCGACGAGCATTGAGCTGCAGCACCATCTGGTGCTTGT
ACGGT------CTGAAAAGCTTGTGCTCTG-----TCACTGATTTCTTGGTAC---GATCCATGGTGGTGCAGGTGCAGA
GAAGCGCGGAGGACAGCTCGGTGGTGGAGGCGACGTACGAGGGCGAGCACAACCACCCGCGCCCCACGGGGGCCAGCGAG
CTGCCGAGCTGCGCGGCGCAGGGCGGCGGCTCGGTGCCGTGCTCCATCTCCATCAACTCCTCCGGCCCGACCATCACGCT
GGACCTCACCAAGAACGGGGGAGGCGTGCAGGTCGTCGAGGCAGGGGAGGCGCAACCGGACCTGAAGAAGGTGTGCCGGG
AGGTCGCGTCGCCGGAGTTCCGGGCGGCTCTGGTGGAGCAGATGGCCCGCGCGCTCACCGGCGACCGAAAGTTCACGGAC
GCGCTCGCCGCCGCGATCCTGCGGAAGCTGCCCGATTATTAGCATCCAGTAGAAGCTATCGAGACTGTGCAGCTTCAGAA
ACTT----------------------------------------------------------------------------
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>chr5A_1029
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-------------------------------------------CGCCGGTCTGCCTCGACCTCATGGTCGGCCTTCCCAT
GGTCCGCGAGCCGTCTCCGGCGAGGTGCGCCGGAATGAGAGCCGAAGCTCACATTTCTAGCTCGGCCTGTGGCAGAGCAG
CTTCCACCACCATGACCAACGGCGAGGTATGCAACCGTTCAACCACACTCTGTTCTTTTCTTTTTTTTGCTTTATCGAAA
AAATCTCTTGCATTTCGCTCGACGTGCTGGATTTGATCGTGCAAATGTGGGGGGTTTCCAGGC---CAGGATCCTGGAGG
CCAAGTTCACGGAGGTGAGCGAGGAGAACAGAAGGCTCACCGAGATGATCGGCTACCTGTACGCTAATAACCAGAATTTC
GGGCGACAGAGCCCCGAAGGCGAGGGCGAGCAGCCCGCGAGTACTGCCGCGTCGCCGACATCGCCGGTGGGCAAGAAAAG
GGGCAGGGAGAGCCCGGACACGTCGGATTCCGGCGATGCCAAC---AGCGACAAGAAGATAAACATGGTCGAGGCCGATC
ATGTCGACGTCGAGAGCCCGCTGAGCAACGGCACTTGCCGGAGAATCAAGGTTAAGAAGGTCTGCACCCGGATCGACCCA
TCGGACACGAGCCTTGTAAGTCCAAATCG----ATCAAAGCTAGCTAGAACCTC---------TCCACTGTTCGAAACAA
TCGTC--------GACTAATTGCAACTGTAC----TGATACTGAAACCTGTGGCATCTGTAGGTGGTGAAAGATGGGTAT
CAATGGCGGAAGTACGGGCAGAAGGTCACACGAGACAACCCGTCCCCCAGAGCCTACTTCCGATGCGCCTTCGCACCGTC
CTGCCCTGTCAAGAAGAAGGTATCCTTCAAACTCCGCCCAATCCT-------------------ACCATCTTGACCATGC
ACGGT------CTGAAAACCTTATGTTCTG-----TCACTGATTTCTTGGTAC---GATCCATGGTGATGCAGGTGCAGA
GAAGCGCGGAGGACAGCTCTGTGGTGGAGGCGACGTACGAGGGCGAACACAACCACCCGCGCCCCACGCGGGACGGCGAG
CTGCCGAGCTGCGCAACGCAGGGCGGCGGCTCGGTGCCATGCTCCATCTCCATCAACTCCTCCGGCCCGACCATCACGCT
GGACCTCACCAAGAACGGGGGAGGCGTGCAGGTCGTCGAGGCAGGGGAGGCGCAACCGGACCTGAAGAAGGTGTGCCGGG
AGGTCGCGTCGCCGGAGTTCCGGGCGGCTCTGGTGGAGCAGATGGCCCGCGAGCTCACCGGCGACCGGAAGTTCACGGAC
GCGCTCGCCGCCGCGATCCTGCGGAAGCTGCCGGATTATTAGCAT-----------------------------------
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>chr5B_1031
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---------------------------------------------CCGGTCTGCCTCGACCTCATGGTCGGGCTTCCCAT
GGTCTGCGAGCCATCTTCAGCGAGGTGCACCGGAATGAGAGCCCAAGCCGACATTGCAAGCTCGGCCTGTGGCAGAGCAA
CTTCCA------TGACCAGCAGCGAGGTATGCAACCGCTCAATCACACTCTGTTGTTTGTCACCCCGTCT----------
--ATTTCTTGATTTTCGCTCGAGGTGCTGGATTTGATCCTGGAAATGTGGGGGATTTCCAGGCAAATAAGATTATGGAGG
CGAAGTTCACGGAGGTGACCGAGGAGAACCGGAGGCTGACCGAGATGATCGGCTACCTGTACGCTAATAGCCAGAATTTC
GCGCGACAGAGTCCCGAAGGCGAGGGCGAGCAGCCCGCAAGTACTGCTGCGTCGCCGACATCGCCGGTGGGCAAGAAAAG
GAGCAGGGAGAGCATGGACACGTCGGATTCTGGCGATGTCAAC---AGCGACAAGAAAATGGGCACGGCCGAGGCCGAGC
ATATCGACGTCGAGAGCCCGCTGAGCAACGGCACTTGCCGGAGAATCAAGGTCAAGAGGGTCTGCACCCGGATTGACCCA
TCGGACACGAGCCTCGTAAGTCCATATCG----ACCAAAGCTAGCTAGAACC-C---------TCCACTGTTCTAAACAA
TCGTC--------AACTAATTGCAACTGTAC----TGATACTGAAACGTATGGCATCTGTAGGTGGTTAAAGATGGGTAT
CAATGGCGGAAGTACGGGCAGAAGGTGACACGGGACAACCCGTCCCCCAGAGCCTACTTCCGATGCGCCTTCGCGCCGTC
CTGCCCTGTCAAGAAGAAGGTATCGTACAAACTCCGCCCAGTTCGACGAGCATTGTGCAGCACTAATTT-----------
-CGGT------CTGAAAAGCTTTTACTCTG-----TCACTAATTTCTTGGTGC---GATCCATGGTGGTGCAGGTTCAGA
GAAGCGCGGAGGACAGCTCGGTGGTGGAGGCGACGTACGAGGGCGAGCACAACCACCCGCGCCCCACGCGGGCCGGCGAG
CTGCCGAGCTGCGCAACGCAGGGCGGCGGCTCGGTGCCGTGCTCCATCTCCATCAACTCCTCCGGCCCGACCATCACGCT
GGACCTCACCAAGAACGGGGGAGGCGTGCAGGTCGTCGAGGCAGGGGAGGCGCAACCGGACCTGAAGAAGGTGTGCCGGG
AGGTCGCGTCGCCGGAGTTCCGGGCGGCTCTGGTGGAGCAGATGGCCCGCGAGCTCACCGGCGACCGAAAGTTCACCGAC
GCGCTCGCCGCCGCGATCCTGCGGAAGCTGCCGGATTATTAGCAT-----------------------------------
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>SNPs
------------------------------------------S-S-----------S---------S-------------
---------S-------------------------------------------------S----S---------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------S---------
-------------------------------------------------------------------S------------
------SSSSSS-SSSSS-SSSSSSSSSSSSSSSSSSSS-------------------------S---------------
-----------------------S--------------------------------------------------------
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--------------------------------------------------------------------------S-----
----S--SSSSS-----------------------S-----------------SSSS-----------------------
S---------SS-----------------------------------------------------SSS------------
-----------------------------------S---S----S-----------------------------------
---------------------------------------------------------S----------------------
-------------------------------------------------------------S------------------
-----S-SSS---------------S------S-----------SSSSSSS--S-S------------------------
----------S-S-------------------------------------------------------------------
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-----------------S------S----------SS------------S------------------------------
-------------------------------------------------------------S------------------
---------------S------S---------------------------------------------------------
-------------------------------------------------S------------------------------
-------------------------------S---------------S--------------S------S----------
------------------------S-----------------------------------------------------S-
-------------------S--------S---------------------------------------------------
----------------------------------------------------------------------S---------
-SS--S-S-SSSS---S--S------S----SSSS------SS---S-----------------------------S---
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-----S----------------S---S-S--SS---S--------S-----------------------S-SS--SSSSS
S-SS-SSSSSS----------S--------SSSSS--S-----------S---SSS-------------------S----
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------------------------------------------S-------------------------------------
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----S---------------------------------------------------------------------------
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-----------S-------S------------------------------------------------------------
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---------------------------------------S----------------------------------------
---S-------S----------------S---------------------------S-----------------------
------------S------------S-------------------------------------------SSS--------
--------------------SSSSSSSSSSSSSSSSS-------------------S------S----------------
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------------------------------------------------------------------S-------------
---S-------------------S--------------------------------------S-----------------
---------------------------------S----------------------------------------------
----------------------------------------S---------------------------------------
-----------------------------------------------------S-----------------------S--
-------------------------------------------------------------------------------S
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>forward_1290
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----------------------------------------------------------------------GACCAGACTA
CCGCTTCTCG----------------------------------------------------------------------
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>reverse_2455
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------------------------------------------------------ATGATCCATGGTGGTGCAGG------
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>forward_1371
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-----------------------------------------------------------------------CGCTATATA
TCACCCGCGCT---------------------------------------------------------------------
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>reverse_3657
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--------------------------------------------------------CTGTGCATCGAAACGCCATA----
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