>input_sequence_55092
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AAAACTCACCGGTATCTAGCCAAG
TTAGCTCGAGCTCCATTGTCACAATACGAGCGTCTACACACCCACATTGCACCTCCAGGGCCAGGCCAACCTCGAACGCC
ATGGAAGCCCCTCTGCACCAGCTGGCCCCCATGCAGCAAGCACTGCTCGCCCGTCCTCAGAACTGCAAGCACGACGCCGC
GGCGACCATGGCCGCGACGGACATGGCGTGCCTCCAGCAGCAGCAGCAGC---TGATGCAGCTGCAGCCGGCGGCGGCGA
ACCCGAACACGCCCTCGGGCGCGGCACGGGAGCAGTGCCCGCGGTGCGCGTCTCACGACACCAAGTTCTGCTACTACAAC
AACTACAACACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCTCGGGGGCTCCCTCCGCAACGT
CCCCATCGGGGGCTCCACCCGCAAGCGCCTGCGCCCGGCGCCGCAGCAGACGATGCGCCGCCCGCCCGTCCACTTCGGTG
CGCCTCCGCCGCCGCCGATGCCGGCGCAGTCGCACTCCCAGCAGGCTCCGCAGGGCGGCCTTCTCAGCTCGCTGTTCGCG
TTCGGCGCGGCGCCGCTGTTCGAGGGCCGCGTCGGGTTCGACCTCGGCCTCGGCCTGCCCGGGCTGAGCCAGGTGGGGCT
CGGCGGCGGCGCCGGGGAGTTCGGCCTGCACTCCCTCGGGCTCCGGGGCGGCCATGCAGGGACGTCGGCGCCGATGCTCT
GGCCGACAGCGTTCTTGGACAACGGCAATGTGGACACGTGGAAGGTGTCCGGCGGCGGGGCGGCTGCCATGTGGGCGCCG
GAGTTCTCTCCCGCGCCGACGGTAGCACAGGTCGGCGGCAATGGCATGTTTCATGGCGGGGCCCAGATAATGGGAC-AAC
TGTGAGAGTGGTCAGTAGTTGTGTGCGTAGCGTACGTGATGGCTCATGCATGTGCCTGCTGGATTATGTGTGTGTAGGTC
TTAATTTGTTGTGCAAGTGCATGGCTCGTGTCGTGTCTTGTTTACGTAGTACGTAGTGGTACAAGGAGGGGCCTGTCTAG
TTTACAGTTTTGGTTCCACAGGGGTAGAATGGTCTCTCATGTGTCTTATAGCGTGCGTC--TCTACAGGTCTGATGGTGT
TATTTGTTGGGTACTT-GGGTTACATGCATGTTGATGTTATGATTG----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TATAATTTACATTATTATCTATAGATTGGGTT
TGCTCTCGTTTTCTTTTTTGAGAGAGAGTTTCAAAGTTTGGTGCATGAACGATCTTCAAAGAATTGTTCAGACCCAACCG
AAAAAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G234000
GATGACTGCTTGTGTGATGATGCATAATATGATCGTAGAAGATGAGCACCCAGAACGTATCTACGATCAAGGGTTTCATC
TTCAGGGTGAGAATGTTGTGCCTGAACATGAAGGAGCTGCAACGTTCGAACAGTTCAGCCAATT-TCATCATGATATGCG
TGATTGGGAAACTTACATGCAATTACAAAATGATTTGGT----CATATGTGGGCTCATGTTGGCAACCAATAGATGTATC
-TCTTTT-ATTTGGCTTGCAAAACTATGTGACACTATTT-TATTTTCATTCGGCTTGTAAAACTATACTA---TTTATTT
GGTTTGAAACTATATGTTTGCTTGTGAAATATTGTCCATATTTGTTAAAAAAGGACGGTTAGCCGTCCACGCCGGCAAAT
ATGGGCCGGCGCATTGGGCGCACAGCCAGCCCAAATCTCAAACCTGGCGGACGCT-----------CGACCCAAACG---
-------AATAAAAAATGGACCAAAGCGTCATCCGTTTGAGTATGTGCGTTGGAGTTGCTCTAAAAACGGACCCAAATGC
AAGTTGTGGTAGTGCAGAGTTCACTTTGGCAAGTTTTAAACCAAATCATCACATTCTCTACAAGTAAAAGCCAGAGGCAG
AAACACGCTGCAGATGGTAACAGTTGTATAGCTAGCAGTAGCATGTTGCTGTAGTACTAGCTCGGCAGAGCTCCTACGTA
GCAGTAGTA----------------------------------------------------TATAGAATGGGAGAAAAAC
CATTTACTTTTACTGTGGGGTTTCAAAACTGTCTGGTGCGGGGAGCATACACGTCAGCATTCAGGTA-GCTCACAGGATT
CC-TTGTCCTGCAAAGATCGAAAGCAACTCTACATGGTCAGTCCCTGCACCCTGCGTACTCATCCCCTCAGCCTTCTGTC
ACCCACCGTACCATCACCTACAACGCCTATCAGACTG----------CACACACCTTCTCTCGCTCGCTCACTCACACAC
TCACTCTGGCTCACGCCGTGTATATATACGCCCTCGCACTTCAATCCCAAAACAGCAAAACTCACCGGTATCTAGCCAAG
TTAGCTCGAGCTCCATTGTCACAATACGAGCGTCTACACACCCACATTGCACCTCCAGGGCCAGGCCAACCTCGAACGCC
ATGGAAGCCCCTCTGCACCAGCTGGCCCCCATGCAGCAAGCACTGCTCGCCCGTCCTCAGAACTGCAAGCACGACGCCGC
GGCGACCATGGCCGCGACGGACATGGCGTGCCTCCAGCAGCAGCAGCAGC---TGATGCAGCTGCAGCCGGCGGCGGCGA
ACCCGAACACGCCCTCGGGCGCGGCACGGGAGCAGTGCCCGCGGTGCGCGTCTCACGACACCAAGTTCTGCTACTACAAC
AACTACAACACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCTCGGGGGCTCCCTCCGCAACGT
CCCCATCGGGGGCTCCACCCGCAAGCGCCTGCGCCCGGCGCCGCAGCAGACGATGCGCCGCCCGCCCGTCCACTTCGGTG
CGCCTCCGCCGCCGCCGATGCCGGCGCAGTCGCACTCCCAGCAGGCTCCGCAGGGCGGCCTTCTCAGCTCGCTGTTCGCG
TTCGGCGCGGCGCCGCTGTTCGAGGGCCGCGTCGGGTTCGACCTCGGCCTCGGCCTGCCCGGGCTGAGCCAGGTGGGGCT
CGGCGGCGGCGCCGGGGAGTTCGGCCTGCACTCCCTCGGGCTCCGGGGCGGCCATGCAGGGACGTCGGCGCCGATGCTCT
GGCCGACAGCGTTCTTGGACAACGGCAATGTGGACACGTGGAAGGTGTCCGGCGGCGGGGCGGCTGCCATGTGGGCGCCG
GAGTTCTCTCCCGCGCCGACGGTAGCACAGGTCGGCGGCAATGGCATGTTTCATGGCGGGGCCCAGATAATGGGAC-AAC
TGTGAGAGTGGTCAGTAGTTGTGTGCGTAGCGTACGTGATGGCTCATGCATGTGCCTGCTGGATTATGTGTGTGTAGGTC
TTAATTTGTTGTGCAAGTGCATGGCTCGTGTCGTGTCTTGTTTACGTAGTACGTAGTGGTACAAGGAGGGGCCTGTCTAG
TTTACAGTTTTGGTTCCACAGGGGTAGAATGGTCTCTCATGTGTCTTATAGCGTGCGTC--TCTACAGGTCTGATGGTGT
TATTTGTTGGGTACTT-GGGTTACATGCATGTTGATGTTATGATTG----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TATAATTTACATTATTATCTATAGATTGGGTT
TGCTCTCGTTTTCTTTTTTGAGAGAGAGTTTCAAAGTTTGGTGCATGAACGATCTTCAAAGAATTGTTCAGACCCAACCG
AAAAAAGAAATGTCCAAACAATCGTAGCTTTTTTTAACATAATACAGACGCAAGAGCTCATATATATGTGCATACACTCA
TCCCTATGAACGCATACCCTACTCCTATGAGCACCTTTGAGAGACTGAGTCGACATGTCATCTTGAGATTTTACAAAGTC
ATCTTAGACGCCACGTAATCGATGGGAACGCCTCCTTCCATTGAACGTGTATCACCAAAAATCCTGATATATATTCAAGG
ATAAATACAAGCATGAGGATTTGAATCCTGATGGACTGGAATAACACTGTCTGCCTAACCATCTAAGTACCCG-------
----------TCGTAATTGAATCAAAAAGTCTCATAACTTCGAATCTATCTCACTTTTTCATGAGCGGACAGTCTGTAAC
AGTATTGCATTACTTTGTGCAGATGTTGCTTCATAAAAAAATACTCCAACC-GTAAAACATCTTACATTTATGTACAAAG
GAAGTATTACTTGATGCAGATGCTGGAGGATCAACAAAATTCCTTTTCGTTCACAAAAAACCATTTTCTCATGAAGATAT
TATTTTCTTGCTCGGTTATTGCACTACTTTCGAAAAGGGACCTCCTATTTATCGACTGGTGCGATGGAAAGAGCT----C
ATGCACCGCCCACACGCCCTTTCGGGCAACCCATTTGCGGGGCATCTCTTTCAAAAAATATATTTTCCGTTTCTTTTTT-
TATTTTCTACTTCCTTAAATCTAGTTCGGGATAT-AAAAAAGGCTCATAAAATTTTAGAAAAACCCAATTTTTTT-CAAT
GTTCACGAATATTAAATCACAAGTTTTTAAACAATGTTCCAAATTCTAAGAGATATTTACTGATTTGGTAAAAATATTTG
TGGATTCAAAATTAGTTAATCAAATTTAAGAAAATGTTTGTTAATTCAAAATATGTTTACTAATCACCAAAAACAAACAT
TTATTAAAAAATTATGGAT-AATTTGAATTTC---AAAATCAAACATGAACAAGAAATGAAAATGGAAGAAGAAA
>chr3D_1
GATGACCGCTTGTGTGATCATGCATAATATGATCGTAGAAGATGAGCGCCTGGAATGTATCTACGATCAAGGATTTCAGT
TTCAGGGTGAGAATGTTGTGCCTGAGCATGGAGGAGTGACAACGTTCGAACAGTTCACCCAATT-TCATCATGACATGTG
TGATTAGGAAACTCACATGCAATTGCAAAATGATTTGGTTGAGCATATGTGGGCTCATGTTGGCAACCAATAGATGTATC
-T-TTTTTATTCGGCTTGCAAAACTATGTGACACTATTT-TATTTTCATTCGGCTTGTAAAACTATGCTA---TTTATTT
GGTTTGAAACTATATGTTTGCTTGTGAAAATTTGTGCATATTTGTTGAAAAAGGGCGGCCAGCTGTCCACGCCGGTAAAT
ATGGGTCGGCGCGTTGGGCGTACTGCCGACACAAATCTCAAAGCTGGCGGACGCCGAGCGGGCGGCCGACCCAAACG---
-------GACAAAAAGCGAACAAAAGCGTTGTCCGTTTGGGTCGGCGCGTTGGAGTTGCTCT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2B_1
GATGACTGCTTGTGTGATCATGCACAATTTGATCGTAGAAGATGAGCGCCCAGAATGTATCTACGATCAAGGGTTTCAGT
TTCAGGGTGAGAATGTTGTGCCTGAGCATGGAGGAGCGGCAACGTTTGAACAGTTCACCCAATT-TCATCATGACATGCG
TGATTGGGAAAATCACATGCAATTGCAAAATGATTTGGTTGAGCATATGTGGGCTCATGTTGGCAACCAATAGATGTATC
-T-TTTT-ATTCATCTTACAAAACTATGTGACACTATTACTTTT---ATTCGGCTTGTAAA-CTATGCTAT--TTTGTTT
GGTTTGAAACTATATGTTTGCTTGTGAAATTTTGTGCATATTTGTTGAAAAAGGGCGGCCAGCCGTCCACGCCGGCAAAT
ATGGGTCGGCGTGTTGGGTGCATTGTCGACCCAAATCTAAAACCTGACAGATGTCGAGCGGGAGGCCGACCCAAACG---
-------GACAAAAAGCGGATAAAAGCGTCATCTGTTTGGGTTGGCGCGTTGGAGTTGCTCTAA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr6D_1
GATGACTGCTTGTATGATCATGCATAATATGATCGTAGAAGATGAGCGTCCGAAAGGTATCTATGATCAAGGGTTTCAGT
TTCAGGGTGAGAATGTTGTGCCTGAGCATGGAGGAGTGGCAACATTTGAACAGTTCACTCAATTGTCGTCATGACATGTG
TGATTGTTAAACTCACATGCAATTGCAAAATGATTTCGTTGAGTATATGTGAGCTCATGTTAGCAACCAATAGATGTATC
-T-TTTTTATTGGGCTTGCAAAACTATGTGACACTATTT-TTTT---ATTCGGCTTGTAAAACTATGCTA---TTTATTT
GGTTTGAAACTATATGTTTGCTTGTGAAAATTTGTGCATATTTGTTGAAAAAGGGCAGCCAGATGTCCACGCCGGCAAAT
ATGGGTCGGCGCCTTAGGCGCACTGTCGACCCAAATCTCAAACCTAGCGGACGCCGAGCGGGCGACCGACCCAAACG---
-------GACAAAA-----------GCGCCGTCCGTTTGGGTCGGCGTGTTGAAGTTGCTCTAA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2B_4
---GACTGCTTATTTGATCATGCACAATATGATCGTAGAATATGAGCGCCCGAAATATATCTACGATCAAGGGTTTGAGT
TTCATCGTGAGAATGTTGTGCCTGAGCATGGAGAAGAAGCAAAGTTCGAACAGTTTACCCAATT-TCATCATGACATGTG
TGACTGGGAAACTCACATGCAATTGCAAAATGATTTGGTTGAGCATATGTGGGCT-ATATTGGCAACTAATAGATGTTTC
TT-TTTT-ATTCGGCTTGCAAAACTATGTGACACTATTT-TATTTTCATTCGGCTTGTAAAACTATGCTATTTTTTATTT
GGTTTGAAACTATATGTTTGCTTGTGAAAATTTATGCATATTT-TTGAAAATGGGCGGCCAGCCAACCACGTCGGGAAAT
ATGGGTCA---------GCGCACTGCTGACCCAAATCTCAAACCCGACGGATGTCGAGCGGGCGGCCGACCCAAACGAAA
AAAAGCGGACAAAA-----------GCGCTGTCCATTTGGGTCGGCACGTTGGAGTTGCTCT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr4B_589
CAATA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AAAGCCAGAGGCAG
AAACACGCTGCAGATGGTAACAGTAGTATAGCTAGCAGTAGCATGTTGCTGTAGTACTAGCTTGGCAGAGCTCCTACGTA
GCAGTGGTAAGCTAGCCGTGGGAAATGCATCACGAATAATACTTATGCAAGCAAAACACTGTATAGAATGGGGGAAAAGC
CATTTACTTTTACTGTTGGGTTTCAAAACTGTCTGGTGCGGGGAGCATACACGTCAGCATTCAGGTAGGCTCACAGGATT
CC-TTGTCCTGCAAAGATCGAAAGCAACTCTACATGGTCAGTCCCTGCACCCTGCGTACTCATCCCCTCAGCCTTCTGTC
ACCCACCGTACCATCACCCACAACGCCTATCCAGCGCCCACACTGTCCACACACCTTCTCTCGCTCACTCACTCTGGT--
----------TCACGCCGTGTATATATACGCCCTCGCACTTCAATCCCAA--------AACTCACTGGTATCTAGCCAAG
TTAGCTCGAGTTCCATTGCCATAATACGAGCATCTACGCACCCACATTGGACCTGCAG-----GGCCAACCTCGAACGCC
ATGGAAGCTCCTCTGCACCAGCTGGCCCCCATGCAGCAAGCACTGCTCGCCCATCCCCAGAACTGCAAGCACGACGCCGC
GGCGACGATGGCCGCGACGGACATGGCCTGCGTCCAGCAGCAGCAGCAGC---TGTTGCAGCTGCAGCCGGCGGCGGCGA
ACCCGAACACGCCCTCGGCCGCGGCGCGGGAGCAGTGCCCGCGGTGCGCGTCGCACGACACCAAGTTCTGCTACTACAAC
AACTACAACACGTCGCAGCCGCGCCACTTCTGCCGTGCCTGCCGCCGCTACTGGACGCTCGGGGGCTCCCTCCGCAACGT
CCCCATCGGGGGCTCCACCCGCAAGCGCCTGCGCCCGGCGCCGCAGCAGGCGATGCGCCGCCCGCCCGTCCACTTCGGCG
CGCCTCCGCCA---CCGATGCCGGCGCAGTCGCACTCCCAGCAGGCTCCGCAAGGCGGACTTCTCAGCTCGCTGTTCGCG
CTAGGCGGGGCGCCGCTGTTCGAGGGCCGCGTCGGGTTCGACCTCGGCCTCGGCCTGCCCGGGCTGAGCCAGGTGGGGCT
CGGCGGCAGCGCCGGGGAGTTCGGCCTGCACTCCCTCGGGCTCCGGGGCGGCCATGCAGGGACGTCGGCGCCGATGCTCT
GGCCAACTGCGTTCTTGGACAACGGCAATGTGGACACGTGGAAGGTGTCCGGCGGCGGGGCGGCTGCCATGTGGGCGCCG
GAGTTCTCTTCTGCGCCGACGGTAGCACAGGTCGGCGGCAATGGCATGTTTCATGGCGGGGCCCAGATAATGGGAC-AAC
TGTGAGAGTGGTCAGTAGTTTGTGC----GCGTACGTGATGGCTCATGCATGTGTCTGCTGGATTGTT--TGTGTAGGTG
TTAATTTGTTGTGCAAGTGCATGGCTCGTGTCGTGTCTTGTTCACGTAGTACGTAGTGGTACAAGGAGAGGCCTGTCTAG
TTTACAGTTTTGGTTCCACAGGGGTAGAATGGTCTCTCATGTGTCTTATAGCGTGCGTTTTTCTACAGGTCTGATGATGT
TATTTGTTGGGTACTT-GT-TTACATGCATGTTGATGTTATGATTA----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TATAATTTACATTATTATCTATAGATTGAGTT
TGCTCTCCTTTTCTTTTCTGAGAGAGAGTCTCAAAGTTTGGTGCATGAACGATCTTCAAAGAATTGTTCAGACCCAACTG
AAAAAAGAAATGTCCAAACGA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TCGTAATTGAATCTAAAAGTTTCATAACTTCGAATACATCTCACTTTTTCATGAGCGGAAAGTCTGTAAT
AGTATTGCATTACTTCGTGCAGATGATGCTTCATAGAAAACATACCCCCTCTGTAAAACGTCTTACATTTATGTACAAAG
GAAGTATTACTTGATGCAGATGATGGAGGATCAACAAAATTCCTTTTTGTTCTCAAAAAT-CATTTTCTTATGAAGATAT
CATTTTCTTGCTCGGTTATTCAACTATTTTCAAAAAGGGACCTCCTATTCATCGGCCGGTGTGATGGAAAAGAGCTAAAC
ATGCACCGCCCACACGCCCTTTCGAGCAACCCATTTGCGAGGCATCTCTTTCAAAAAATATATTTTCTGTTTCTTTTTTC
-ATTTTCTGCTTCCTTAGATCTAGTTCGGGATGTCAAAAAAGGCTCATAAAATTTTAAAAATCGCAA--TTTTTT-AAAT
GTTCATGAATATTAAATCACAACTTTTAAAA-AATGTCCCACATTCTAAAACATATTTACTGATTTGGTAAAAAAAAT--
TGGATTTAAAATTAGTTAATCAAATTTACAAAAATGTTCATTAATTCAAAATATGTTTCCTAATCAACAAAA--AAACAT
TTATTAAAAAATATATGCAAAATTTTTGAATTTCAAAAATCAAACATGAACAAGAAACGAAAATGACAGAACAA-
>chr4D_589
CAATA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AAAGCCAGAGGCAG
AAACACGCTGCAGATGGTAACAGTAGTATAGCTAGCAGTAGCATGGTGCTGTGTTACTAGCGTGGCAGAGCTCCTACGTA
GCAGTAGTAA------------------------------------GCAAGCAAAACTCTGTATAGAATGGGAGAAAAGC
CATTTATTTTTACTGTTGGGTTTCAAAACTGTCTGGTGCGGGGAGCATACACGTCAGCATTCAGGTA-GCTCACAGGATT
CCTTTGTCCTGCAAAGATCGAAAGCAACTCTACGTGGTCAGTCCCTGCACCCTGCGTACTCATCCCCTCAGCCTTCTGTC
ACCCACCGTACCATCACCTACAACGCCTATCCAACACCCGCACTGTCCACACACCTTCTCTCACTCACTCACTCACTCAC
TGGCTCTTGCTCACGCCGTGTATATATACGCCCTCGCACTTCAATCCCAAAACAGCAAAACTCACTGGTATCTAGCCAAG
TTAGCTCGAGCTCCATTGTCATAATACGAGCATCCACACACCCACATTGCACCTGCAG-----GGCCAACCTCGGACGCC
ATGGAAGCTCCTCTGCACCAGCTGGCCCCCATGCAGCAGGCACTGCTCGCCCATCCCCAGAACTGCAAGCACGACGCCGC
GGCGACGATGGCCGCGACGGACATGGCGTGCCTCCAGCAGCAGCAGCAGCAGCTGATGCAGCTGCAGCCGGCGGCGGCGA
ACCCGAACACGCCCTCGGGCGCGGCGCGGGAGCAGTGCCCGCGGTGCGCGTCGTACGACACCAAGTTCTGCTACTACAAC
AACTACAACACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCTCGGGGGCTCCCTCCGCAACGT
CCCCATCGGGGGCTCCACCCGCAAGCGCCTGCGCCCGGCGCCGCAGCAGGCCATGCGCCGCCCGCCCGTCCACTTCGGCG
CGCCTCCGCC---GCCGATGCCGGCGCAGTCGCACTCCCAGCAGGCTCCGCAAGGCGGCCTTCTCAGCTCGCTGTTCGCG
CTCGGCGCGGCGCCGCTGTTCGAGGGCCGCGTCGGGTTCGACCTCGGCCTCGGCCTGCCCGGGCTGAGCCAGGTGGGGCT
CGGAGGCAGCGCCGGGGAGTTTGGCCTGCACTCCCTCGGGCTCCGGGGCGGCCATGCAGGGACGTCGGCGCCGATGCTCT
GGCCGACCGCGTTCTTGGACAACGGCAATGTGGACACGTGGAAAGTATCCGGCGGCGGGGCGGCTGCCATGTGGGCGCCG
GAGTTCTCTCCTGCACCGGCGGTGGCACAGGTCGGCGGCAATGGCATGTTCCATGGCGGGGCCCAGATAATGTGACAAAC
TGTGAGAGTGGTCAGTAGTTGTGTGCGTGGCGTACGTGATGGCTCATGCATGTGTCTGCTGGGTTATGTGTGT--AGGTG
TTTATTTTTTCTGCAAGTGCATGGCTCGTGTCGTGTCTTGTTCACGTAGTACGTAGTGGTACAAGGAGAGGCCTGTCTAG
TTTACAGTTTTGGTTCCACAGGGGTAGAATGGTCTCTCATGTGTCTTATAGCGTGCGTC--TCTACAGGTCTGATGGTGT
TATTTGTTGGGTACTTGGT-TTACATGCATGTTGATGTTATGATTGTACTCCCTCCGTCCCTAGATATAATCTTTTTAGA
CATTTTAAATAGACTACAACATACGGATGTATGTAGACATATTTTAAAGTATAGATTCACTTATTTGGCTTCGTATGTAG
TCACTTGTTGAAATCTTTAAAAAGACTTATATTTTGTAACGGAGGGAGTATAATTTACATTATTATCTATAAATTGAGTT
TGCTCTCGTTTTCTTTTTTGAGGGAGAGTTTCAAAGTTTGGTGCATGAACGATCTTCAAAGAATTGTTCAGACCCAAC-G
AAAAAAGAAATGTCCAAACGATCGTAACTTTCTTTAACATAATACAGACGCAAGAGCTCATATATATGTGCATACGCTCA
CCCCTATGAACGCACACCCTATTCCTATGAGCACCTCTGAAA-ACTGAGCCGACACGTCATCTTGAGATTTTACGAAGTC
ATCTTAGACGACTCGTAGTTGACGGGAACGTCTTCTCCTACTAAACGTGTATCACCAGAAATCCTGATATAAATTCAAGG
ATAAATGCGAGCACGAGGATTTGAATCCTGGTGGACTGGGATAATACCGTCCTCCTAACCATCTAACTACACGTTGGTTC
GTCCAGACGATCGTAATTAAATCTAAAAATCTCATAACTTTGAATATATCTCACTTTTTCATGAGCGGACAGTCTGTAAC
AGTATTGCATTACTTCGTGCAGATGCTGCTTCATAGAAAAATACTCCTTCC-ATAAAACGTCTTACATTTATGTACAAAG
GAAGTATTACTTGATGCAGATGCTGGAGGATCAACAAAATTCCTTTTCATTCTCAAAAAACCATTTTCTGATGAAGATAA
CATTTTCTTGCTCAGTTATTGCACGACTTTCGAAAAGGGACCTCCTATTTATCGACCGGTGTGATGGAAAGAGCTGAAAC
ATGCACCGCCCACACGCCCTTTCGGGCAACCCATTTGCGGGGCATCTCTTTCAAAAAATATATTTTCCGTTTCTTTTTTT
TATTTTCTGCTTCCATAAATCTAGTTCGGGATAT-AAAAAAGGCTCACAAAATTTTAAAAATCCCAA--TTTTTTTCAAT
GTTCACGAATATTAAATCACAAGTTTTTAAA-AAATGTTTCAATGTTCACGAATA-TTACTGATTTGGTAAAAATATTTG
TGGATTCAAAATTAGTTCATCAAATTTAAGAAAATGTTTGTTAATTCAAAATATGTTTACTAATTACCAAAAACAAACAT
TTATTAAAAAATTATGGAT-AATTTTTGAATTTCAAAAATCAAACATGAACAAGAAACAAAAATGAAAGAAGAAA
>SNPs
------------------S----------------------------S-------S----------------------SS
-------------------------S----S------S-------------------S----------------S-----
-------------S----------S-------------------------------------------------------
--S--------S------------------------------------------------------S-------------
------------------------------S----S----------S-------S---SS--------------------
-----S------S----------S---SS-------------------------S-------------------------
-------S-S-----SS----S-----------------S--SS-S------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
------------------------S-------------------------------------S-----------------
------------------------------------------------------------------------------S-
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------SS--SS-----------------------------S---------S---
-SS----S---------------------------------------------------------S--------------
---------------------S---------S----------------------S---SSSSS-----------------
--------S-------------------------------------------S---S-----------------------
------S-------------------------------------------------------------------------
-------------------------S--------------------------S---------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S----------------------------S-
----------SSS---------------------------------------S---------------------------
S-------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
----------------------------S-------------------------S------------------------S
------------------------------------------S-------------------------S-----------
--------------------------------------------------------------------------------
------------------SS------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
------------------------------------------------------------------------------S-
-------------------S------S----S-------------------------------------------S----
S-------------S------S--------------S---S-S------S-----S------------------S-----
----------S-S----S-S--S-------S--S--S-S-S-S--------------S-------------S--------
------S-S----S----------------S--------S----S--S---SS-------------S---S---------
-----------------------S---------------------S----------------------------------
---------------S---------S---------S-----------SS----------S--------------------
----------------------------------------------------S----------------S----------
S-------------------------------------------------------S----S------------------
--------------------------------------------------------------------------------
--------S------------------------------------------------S---SS--S-SS-----------
-------------------------------S-----------------S-S----------------------------
--------------------------------------------------------------------------------
-------------------------SSSSS-S-------------------------S-------S---------
>forward_1043
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTCGCTCACTCACACAC
TCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_3177
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGGTGCGATGGAAAGAGCTC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
