>input_sequence_55087
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATGAAGC
TCATCTGCGACTTCCCGTCGCCAAAGTCCCTGCCGGACAAGTACGTCTTGCCGCCGGAGAGACGCCCTTGCAACCACGAG
CTACAAGGCGACCTCTCGGTCGCTCTCCCCGTCATCGACCTCCAAGGAGCTCTTGGAGATGGCCGCCGACAGGTCATTGG
CGAGATCATGGAGGCCGGCAAGGAGTATGGCTTCTTCCAGGCACGTT-------------------GCCTTGCTTCGTTT
CACTGCCAT------------GCATGTAATCTGCGCTCCTGAATCCTGATCAGTTCTTACATTGCATGCATGG--CGTTG
CAGGCAGTGAACCACGGTGTGGGGGAAGACGTGATCCAGGGCTTCCGTGAAGCGGCGGCAGAGTTCTTCAGGATGCCGGC
CGAGGCAAAACTCAAGCACTACTCCAACGAGCACAACAAGCATTACCGGGTCTTCTCCGGCTCCGTCACGTCCCACACTG
ACACCAACGACATCCGCTACTGGCGCGACTGTCTCAAGCTCCGGTGCTACCCGGTCGACAAGCTGATGGACCATTGGCCA
TCACAGCCAGAAACATTTCGGTAAGAGTACATTCGTGTTGATCC----CTTATACT------------------------
------------------------------------------------------------------------------CT
CACCTAGCTATAGCGGCATTGTATTCATGGGTTGCAACCC---CACGCAGGGAGCGTCTTGCAAAGTACGCCGTGGCAGT
GCAAGAGCTGGCACAAAGGCTCCTGCGACTCATCGCGGAGGGGCTCGGCTTGGATAGTCAATTCTTCGAGGGCGACCTCA
CCGGCGGGGAGACGATGATGAACGTGAACTACTACCCGCGATGCCCCGACCCGAGCCTCACGCTGGGCATCCGGCCGCAT
TCCGACCGCTACATCCTCACCGTCCTGTCACAGGGCGACGTCACTGGTTTACAGGTGAAGCACAAGGGACGCTGGATCGG
TGTCCAACCCATGCGCAACGCGTTTGTTGTCAACTTTGGGCTTCAGCTGGAGGTGAGGTCGCATCACA--TCG---CATC
TACCCTATGGAAGAAGAGAGCAC------AT--GATAGCTAATTCTATTTGTTCTTGTGTAGATGGTGACCAACGGGGTG
CTTACAAGCGTGGAGCACCGGGTGGTGACGAACTCGGCCAAGGCGAGGATGTCGGTGGCAACGCTTATCAGGCCAAATAT
GGGCTGCAGGATTCGTCCGGCGCCGATGATGGTGAATGGAGAGACCAACCATCGTCCTAAGTACAGGGACTTCACGGGGA
GCGAGCTCATCGAGGCGTATGAGGCCACTGCGGGAAATAGGGAGGCCCTGCTTGCCTTGTTCAGGATCCATCACACCAAG
TTGCTATAG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3A_1_TraesCS3A01G445000
ACAATGCC-GGGGGAAAGGCTATCACATTCATGCTACAGAAGGAAAAAACAGATAATATAAGTACTCCTTTCGTCTAGGT
GCGTAAGTTACCTTACGAAAATCAAATAATCTCAAAATACTTAGATATGATACATTAACTTCCTTCTTGTTTCTTATTTC
ATGACATACCAATCAATAAAAAATGTGGGCCGTGCATGATTTCAGTGACTTAAGACTACCAAACATGACATACAGTGGTT
AGTTCATTGCATGCAATGCTATTAATTAGAAGAAAACATTAAGTTCTCTTGTTTTTTCCTTTGTCTTAGTCGTGTTGCAC
AACCTAAGATGACTTATATACCTAGACGGAGGGAGTAAGTACAGTGTTAGCTGAACATCTATACCACAATAGCTACTCCC
TCTGATCCAAGTCGTGGTTTTGAACTAAGATTGAGTGAAACTTTTTGAAGTTTCAATCACTATT---TGTGCCCCGTCGA
TAAAATTCAATCACACAATTAAGAAAATAACCGCAAAAACATAAGTGCAATTGTATCAAAATAAAGTGTGGTTGCAGGTT
TCTCGTATTCAGATACACATCCACGCTTACTCTTTCACAAT----ATGGGACGGTGGC--------TAGAAACACATGCA
ATTTCCGACAAAAATAAGGACTTGCTGTAAAAATTGCCATGTTCGCTTCGAGAAATTGTCATGCACTGCACAATATAATT
GCCCTGAAAAATGCTCATTTTGCCATCCT--------GTCCCACTGAACTTTCATTGAATAACATTACCCAAATGTATAA
CTATTTATTTCTTCCTCTTTCTCCGTGGCATGTCGAAGAAGAGATGCAGAGGAACAAGGCCCCTTCTCTAGTCTAGTGCC
TTCTCAATCAAAAAGGAAAGAAAAAAATGCCTGCGGTAGGTAGGCCTTCTCAAACTAGTATAAGTGCATGTGATAGAGTG
GTG---CAATACAGACAGAAAAG------TAGTATACGGTACAGAAGTCGAAGCCAAGAAGAAAAGCGAGACAATGAAGC
TCATCTGCGACTTCCCGTCGCCAAAGTCCCTGCCGGACAAGTACGTCTTGCCGCCGGAGAGACGCCCTTGCAACCACGAG
CTACAAGGCGACCTCTCGGTCGCTCTCCCCGTCATCGACCTCCAAGGAGCTCTTGGAGATGGCCGCCGACAGGTCATTGG
CGAGATCATGGAGGCCGGCAAGGAGTATGGCTTCTTCCAGGCACGTT-------------------GCCTTGCTTCGTTT
CACTGCCAT------------GCATGTAATCTGCGCTCCTGAATCCTGATCAGTTCTTACATTGCATGCATGG--CGTTG
CAGGCAGTGAACCACGGTGTGGGGGAAGACGTGATCCAGGGCTTCCGTGAAGCGGCGGCAGAGTTCTTCAGGATGCCGGC
CGAGGCAAAACTCAAGCACTACTCCAACGAGCACAACAAGCATTACCGGGTCTTCTCCGGCTCCGTCACGTCCCACACTG
ACACCAACGACATCCGCTACTGGCGCGACTGTCTCAAGCTCCGGTGCTACCCGGTCGACAAGCTGATGGACCATTGGCCA
TCACAGCCAGAAACATTTCGGTAAGAGTACATTCGTGTTGATCC----CTTATACT------------------------
------------------------------------------------------------------------------CT
CACCTAGCTATAGCGGCATTGTATTCATGGGTTGCAACCC---CACGCAGGGAGCGTCTTGCAAAGTACGCCGTGGCAGT
GCAAGAGCTGGCACAAAGGCTCCTGCGACTCATCGCGGAGGGGCTCGGCTTGGATAGTCAATTCTTCGAGGGCGACCTCA
CCGGCGGGGAGACGATGATGAACGTGAACTACTACCCGCGATGCCCCGACCCGAGCCTCACGCTGGGCATCCGGCCGCAT
TCCGACCGCTACATCCTCACCGTCCTGTCACAGGGCGACGTCACTGGTTTACAGGTGAAGCACAAGGGACGCTGGATCGG
TGTCCAACCCATGCGCAACGCGTTTGTTGTCAACTTTGGGCTTCAGCTGGAGGTGAGGTCGCATCACA--TCG---CATC
TACCCTATGGAAGAAGAGAGCAC------AT--GATAGCTAATTCTATTTGTTCTTGTGTAGATGGTGACCAACGGGGTG
CTTACAAGCGTGGAGCACCGGGTGGTGACGAACTCGGCCAAGGCGAGGATGTCGGTGGCAACGCTTATCAGGCCAAATAT
GGGCTGCAGGATTCGTCCGGCGCCGATGATGGTGAATGGAGAGACCAACCATCGTCCTAAGTACAGGGACTTCACGGGGA
GCGAGCTCATCGAGGCGTATGAGGCCACTGCGGGAAATAGGGAGGCCCTGCTTGCCTTGTTCAGGATCCATCACACCAAG
TTGCTATAGCTAGCGACAAGTACACAAACACACACTG---------------TCGACCATCGCTTTCTTAAGTTCAGTTT
GTCGATCGTAGTTTACTACT---CCCAACAATAAATGATTGTTAAATCATGCATGCCGATTGACATGTGCACTCAGTTGT
TTTAATTTTCAATTATCTGTTGTTATATTTTGCACTGTAATAAGCAACAGAGTGATTGCTACTCCATCGGCTTCCTAATG
TACTGCATACAGTACACCTTTCAAAAGTCAAACTTACTCCATCTCTCTCAGTTTACGGGGCATGCGCGTACCCTTAGGTC
GTCAATTTGACCAACCTAATGCAAGTCATATATTACAAAAATATACTGCCAATATAAACTTCAGATGTTCTATTTTCAAA
TGATATAAATGTTTGTGTTATATAGTTTATATTAAAGTGATAAGATTGGCAACCTAGATATACATGCAGAACTTGTAGAT
TGAAACGGAGGGAGTAGCAATCATTGACCAAGTTTATAATAGCAACTCCTTGTGCACAAAAGGAGGGTGATTAAGGCATG
CATTCCAGATTTCCGGACACTTTTAGCATAAGGAAACAAAAACAAATAACATCTAGATACAGCTCTTTGAGCATCAACTA
ATTTCGGACAGAGGGAGTATGATACTTGACAGCGATAGGTAATCATCAAAAGTCAGCTCATCACAAAATGAAATAGCTGT
TTGGAGCTCTAACAACCAATATGTATATTTATTTTTTTTATCAAAATTAATATATTCATTAAATATAATAATAATAAAAA
CTTCAGTGGTACATGAATAATTTCTCTTATATGGAATAAACCTCAACATCATCAGTACGCTACATAAGAGAAACTACTTA
TAGCTCTAAGTTCAGTAGCATACTGCACTTGTTGAGGTCCATTCCACATACTCCCTCCGGTCCTTTTTAGTTCGTATATA
AGATTTGTCTGAAGTCAAACCTCGTAAACTTTGACCAAATTTACAGAAAAAACACCAACATTCAAAA
>chr3D_1
ACAATGCCGGGGGGAAAGGCTATCACATTCATGCTACGGAAGGAAAATGGATAATTT--A--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGTAAGTACAGTGTTAGCTGAACAGCTATACCACAATGGCTACTCCC
TCCGATCCAAGTCGCGGTTTTGAACTAAGATTGAGTGAAACTTTTTGGAGTTTCAATCACTATT---TGTGCCCCGTCGA
TAAGATTCAATCACACAATTAAAACAATAACCGCAAAACCATAAGTGCAATTGTATCAAAATAAAGTGTAGTTGCAGGTT
TCTCGTATTCAGATACACATCCACGGTTACTCTTTCACAAT----ATGGGACGGTGGCAATTTCTTTAGAAACAGATGCA
ATTTCCGACAAAATTAAGGACTTGCTGTAAAAATTGCCATGTTCGCTTCGAGAAATTGTCATGCACTGCACAATATAATT
GCCGTGAAAA-TGTTCATTTTGCCATCCT--------CTCCCAGTGAACTTTCATTGAATAACATTACCCAAATGTATAA
CTATTTATTTCTTCCTCTT-CTC-----CATGTCGAAGAAGAGATGCAGAGGAACAAGGCCCCTTCTCTAGTCTAGTGCC
TTCTCAATCAAAAAGGAAAAAAAA------------TAGGTAAGCCTTCTCAAACTAGTATAAGTGCATGTGATAGAGTA
GTAGTACAATACAGACAGAAAAG------TAGTATACACTACAGAAGTCGAAGCCAACAAGAAAAGTGAGATAATGAAGC
TCATCTGCGACTTCCCGTCGCCAAAGTCCCTGCCGGACAAGTACGTGTTGCCGCCGGAGAAACGCCCTTGCAACCACGAG
CTACAAGGCGACCTCTCAGTCGCTCTCCCCGTCATCGACCTCCAAGGAGCTCTTGGAGATGGCCGGCGACAGGTCATTGG
CGAGATAATGGAGGCCGGCAAGGAGTTTGGCTTCTTCCAGGCACGTT-------------------GCCTTG-TTCGCTT
CATTGCCAT------------GCATGTAATTTGCATTCCTGAATCCTGACCAGTTCTTGCATTGCATGCATGGGGTGTTG
CAGGCGGTGAACCACGGTGTGGGGGAAGACGTGATCCAGGGCTTCCGGGAAGCGGCGGCAGAGTTCTTCAGGATGCCGGC
GGAGGCAAAACTCAAGCACTACTCCAACGAGCACAACAAGCATTGCCGGGTCTTCTCCGGCTCCGTCACGTCCCACACTG
ACACCAACGACATCCGCTACTGGCGCGACTGTCTCAAGCTCCGGTGCTACCCGGTCGACAAGCTGATGCACCATTGGCCA
TCACAGCCAGAAACATTTCGGTAAGAGTACATTCGTGTTGATATTCCTCTTATTCT------------------------
------------------------------------------------------------------------------CA
CACCTAGCTATAGCGACATTG--TTCATGGGTTGCAACCCGGCCACGCAGGGAGCGTCTTGCCAAGTACGCCGTGGCAGT
GCAAGAGCTGGCACAAAGGCTCCTGCGACTCATCGCGGAGGGGCTCGGCTTGGACAGTCGATTCTTCGAGGGCGACCTCA
CCGGCGGGGAGACGATGATGAACGTGAACTACTACCCGCGATGCCCCGACCCGAGCCTCACGCTGGGCATCCGGCCGCAT
TCGGACCGCTACATCCTCACGGTCCTGTCACAGGGCGACGTCAGTGGTTTACAGGTGAAGCACAAGGGACGCTGGATCGG
TGTCCAACCCATGCACAACGCGTTTGTTGTCAACTTTGGGCTTCAGCTGGAGGTGAGGTCGCATCGCA--TCACACCACC
TATCCTGTGGAAGAAGAGAGTAGTAGTATAT--GGTAGCTAATTCTACATGTTTTTATGTAGATGGTGACCGACGGGGTG
CTCACAAGCGTGGAGCACCGGGTGGTGACCAACTCGGCCAAGGCGAGGATGTCGGTGGCAACGCTTATCAGGCCGAATAT
GGGCTCCAGGATTGGTCCGGCGCCGGTGATGGTGAATGGAGAGACCAACCATCGTCCTAAGTATAGGGACTTCACGGGGA
GCGAGCTCATCGAGGCGTATGAGGCCACTGCGGGAAATAGGGAGGCCCTGCTTGAAATGTTCAGGATCCATCACGCCAAG
TAGCTAGACCCAACGCCAAACACACACACACACACACACACACACACATCCTTCGACCATTGTCTTCTTAAGTTCACAGT
GCCGATAGTCCGTAGTTTATTACCCCAACAATAAATGATTGTTAAATCGTGTATGCTGACCGACATGTGCAGTCGGTGGT
TTTGATTTTCGATAT--TGTTGTTATATTTTGCACTGCAATAAGGAACAGAGTAATTG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_1
ACAATGCCGGGGGGAAAGGCTATCACATTCATGCTACGTAAGGAGAATAGATAATTTATA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AGTGAGTACAGTGTTAGCTGAACAGCTATACCACAGTAGGTACCCCC
TTCGATCCAGGTCGCCGTTTTGAACTAAGATTGAGTGAAACCTTTTGTAGTTTCAATCACTATTATTTGTGCCCCATCGA
TAAAATTCAATCACACAATTAAAACAATAACCACAAAAACATAAGTGCAATTGTATCAAAATAAAGTGTAGTTGCAGGTG
TCTCGTATTCAGATACACATGCACGTTTACTCTTTCACAATACGCATGGGACGGTGGCAATTTCTTTAGAAACACACACA
ATTTTCGACAAAAATAAGGACTTGCTGTAAAAATTGCCGTGTTCGCTTCGAGAAATTGTCATGCACTGCACAATATAATT
GCCGTGAAAAATGTTAATTTTGCCATTCTCTCGCACAGTCCGAGTGAACTTTCATTGAATAACATTACCCGAATGTATAA
CTATTTATTTCTTCCTCTTTCTC-----CGTGTCAAAGAAGAGATGCAGAGGAACAAGGCCCCTTCTCTAGTCTAGTGCC
TTCTCAATCAAAAAGGG--GAAACAAATGCCTGCGGTAGGTAGGCCTTCTCAAACTAGTATAAGTGCATGTGATCGAGTA
GTG---CAATACACACAGAAGAAAAGTACTAGTATACAGTACAGAAGTCGAAGCCAACAAGAAAAGTGAGACAATGAAGC
TCATCTGCGACTTCCCGTCGCCGAAGTCCCTGCCGGACAAGTACGTCTTGCCGCCGGAGGAACGCCCTTGCAACCACGAG
TTACGGGACGACCTCTCAGTCGCTCTCCCCGTCATCGACCTCCAAGGAGCTCTTGGAGATGGCCGCCGACAGGTTATTGG
CGACATCATGAAAGCCGGCAAGGAGTTTGGCTTCTTCCAGGCACGTT-------------------GCCTTGCTTCGTTT
CATTGCCAT------------GCATGTAATTTGCACACCTGAATCCTGACCAGTTCTTGCATTGCATGCATGGGGCGTTG
CAGGCGGTGAACCACGGTGTGGGGGAAGACGTGATCCAGGGCTTCCGAGAAGCGGCGGCAGAGTTCTTCAGGATGCCGGC
GGAGGCAAAACTCAAGCACTACTCCAACGAGCACAACAAGCATTGCCGGGTCTTCTCCGGCTCCGTCACGTCCCACACTG
ACACCAACGACATCCGCTACTGGCGCGACTGTCTCAAGCTCCGGTGCTACCCGGTGGACAAGCTGATGCACCATTGGCCA
TCACAGCCAGAAACATTTCGGTAGGAGTACATTCGTGTTGAT--TCCTCTTACTCT------------------------
------------------------------------------------------------------------------CA
CACGTAGCTATAGCGGCATTG--TTCATGGGTTGCAACCCG-CCACGCAGGGAGCGTCTTGCCAAGTACGCCGTGGCAGT
GCAGGAGCTGGCACAAAGGCTCCTGCGACTCATCGCGGAGGGGCTCGGCTTGGACAGTCAATTCTTCGAGGGCGAGCTCA
CCGGCGGGGAGACGATGATGAACGTGAACTACTACCCGCGATGCCCTGAACCAAGCCTCACGTTGGGCATCCGGCCGCAT
TCAGACCGCTACATCCTCACGGTCCTGTCACAGGGCGATGTCAGTGGTTTACAGGTGAAGCACAAGGGGCGCTGGATCGG
TGTCCAACCCATGCGCAACGCGTTTGTTGTCAACTTTGGGCTTCAGCTGGAGGTGAGGTCGCATCACACATCG---CATC
TATCCTATAGAAGAAGAGAGTAC------AT--GGTAGCTAATTATATATGTTCTTGTGTAGATGGTGACCAACGGGGTG
CTTACAAGCGTGGAGCACCGGGTGGTGACCAACTCGGCCAAGGCGAGGATGTCGGTGGCAACGCTTATCAGGCCAAATAT
GGGCTGCAGGATTGGTCCGGCGCCGGTGATGGTGAATGGAAAGACCAGCTATCGTCCTAAGTATAGGGACTTCACAGGGA
CTGAGCTCATCGAGGCGTACGAGGCCACTGCGGGCAACAGGGAGGCCCTGCTTGAAATGTTCAGGATCCATCACACCAAG
TAGCTAGAGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------AAAGAAAAAAATGCCTGCGGTAGGTAGGCCTTCTGAGACTAGTATAAGTGCATGTGATAGAGTA
GTA---GAGTACACACA-AAAAG------TAGTGCAGTACTCAGC--TCGAAGCCAACAAGAAAAGTGAGACAATGAAGC
TCATCTGCGACTTGCCGTCGCCGAAGTCCCTGCCGGACAAGTACGTCTTGCCGCCAGAGAAACGCCCGTGCGACAACGAG
CTACGGGACGACCTCTCGGTCGCTCTCCCCGTCATCGACCTCCGGGGTGCTATGGGAGATGGCCGCCGACAGGTTATTGG
TGAGATCATGGAGGCCGGCAAGGAGTTTGGCTTCTTCCAGGCACGTTAGCTGATTAAATGGACGTTGCCTTGCTTTGCTT
CATTGCCTTTTCGCCATGCAAGCATGTAATCTGCGGT---------------GTTCCTGATATTCATGCATGCCGTTTTG
CAGGTGGTGAACCATGGTGTGGAGGAAGACGTGATCCAGGGCTTCCGAGAAGCGGCCGCGGAGTTCTTCAGGATGCCGGA
GGAAGCAAAACTCAAGTACTACTCCAACGAGCCGAACAATCCATTCCGGGTCTTCTCCGGCTCCGTCACGTCGCACACTG
ACACGAACGACATCCGCTACTGGCGCGACTGCCTCAAGCTTCGGTGCTACCCGGTTGACAAGCTGATGCACCATTGGCCA
TTAGAGCCAGAAATATTTAGGTAAATGAACAATTTAAAGTCAATAATGATGAAGCTAGGAAGAACAGAAAATTGTTACAC
CATCCGATCCAAAATAAGTGTCGCGGTTTTAGTTCAAAACTTCAAATTAGGAGTAGTACATCCGTGTACTATCTATAACC
CAGCTATATAATGCGGCATTG--TTTATGGGT------------ACGCAGGGAGCGTCTTGCCAAGTACGCGGTGGAAGT
GCAGGACCTGGCGCGAAGGCTCCTCCGGCTGATCGCCGAGGGGCTCGGCTTGGATGATCAATTCTTCGAGGGCGACCTCA
CCGGCGGGGAGACGGTGATGAACGTGAACTACTACCCGTCATGCCCCAACCCGAGCCTCACTTTGGGCATCCGACCGCAC
TCCAACCGCTACATCCTCACGATCTTGTCTCAGGGCGACGTCAGTGGTTTACAAGTCAAGCAAAAGGGACGCTGGATCGG
TGTCCAACCCATAGACAACGCCTTTGTTGTCAACTTTGGGCTTCAGCTGGAGGTGAGGTCGCAACGCATCAATCTTACTG
A----TGTCTAAGAAGAGAGTATACGTATGTGCGGTAGCTAATTCTACATGTTTTTGCGTAGATGGTGACCAACGGGGTG
CTTACAAGCGTGGAGCACCGGGTGGTGACCAACTCGGCCAAGGCGAGGATGTCAGTGGCAACACTTATCAGGCCCAATAT
GGAGTGCATGATAGGTCCGGCACAGGTTATGGTGGATGGAGACACCAACCC---TCCCAAGTACAGGGATTTCACGGGGA
GCGAGCTCATCGAGGCGTATGAGACCACTGCTGGCAACAGGGAGGCCCTGCTCGAAATGTTCAGGATCCATCACACCAAA
TCGTGCTAGCTAGCGCCAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>SNPs
-------------------------------------S---------S-S-S-SSS----SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S----------------------
--S-----------S--------------------------------S--------------------------------
----------------------S-S--------------------------------------------S----------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
---S---------S-----------------------------S------------------------------------
-----------------------SSSSS----------------------------------------------------
-------------------------------------------------------------------------------S
-------------------------------------S-------------------S--------S-------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--S----------------------------------------------S--------S---------------------
-----S-----------------------------------------S--------------------------------
S-------------------------------------------S-----------------------------------
--------------------------------------------------------------------S-----------
------------------------------------------SS---------S--------------------------
-------------------------------------------------------------------------------S
---------------------SS---------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S----------------------S------------------------------------
--------------------------------------------------------------------------------
--S-----------------S-------------S-------------S-------------------------------
-----------------------------S--------------------------------------------------
-------------S-----------S------------------------------------------------------
------------------------------------------------------SSS-----------------------
-S-------------S---SS-----S--------SS-----------------------S-SS------------SSS-
-S----S--SSS-SSS-SS-----------------------------S--S----S--SS----------S--S--S--
---S------S--SSSS--------------------S------S--------S----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_207
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGCCGTGCATGATTTCAGTG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_1441
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CGAGGCAAAACTCAAGCACT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_1330
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CTGCGCTCCTGAATCCTGAT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_3011
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TGTGCACAAAAGGAGGGTGA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
