>input_sequence_55082
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------------------------------------------------------------------------GATCGATG
CATATGCAGCAGGCCA-TATCATCATTACCTTATGCTTGATCAATCGACTGCAGGTGCATGCGACGATGAGCGCCTTGAG
ATGATAAGCGCCGGCGACCATGGGAACGACCGCCGGAAGTTCGAGCCGGCGGCGGCC-----------------------
----------TCGCGGCACTGGTCGGCGTCCACGGAGTCGCGGATCGTGCGCGTGTCGCGCGTGTTCGGCGGCAAGGACC
GGCACAGCAAGGTGAGGACCGTCAAGGGGCTGCGCGACCGCCGGGTGCGCCTCTCCGTGCCCACGGCCATCCAGCTCTAC
GACCTCCAGGACCGCCTCGGCCTCAGCCAACCCAGCAAGGTCGTCGACTGGCTCCTCAACGCCGCCCAGCATGAGATCGA
CAAGCTGCCGCCGCTCCAATTCCCGCCGCACGACGACGACCTCCTGCTCTCCGCCCACCACCACCACCATCACCTGCAGC
CGACCTCCTCCATGACGTCCATGGCCATGGCGCCGCCGTTCTCGCACGCCACCGCCACCGCAGCCGCGGCGTCCATGATG
GTCGTCGACGGCGACAAGGCGGCGCAGGCCCACGACGGGGGCGGCGATCTCAAGGGGTTCATGAGCCTGAGCAACTCGCT
CGGCCTGGTCAACGGTGCCGGAGCCGCCATGCCGACGCTGGCTGCGGCCCAAGCCGGGTCGTACCACCACCACTACGCCG
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---------------------------------------------------------------------------CTCAT
GAGGCTTGGAGCAATGGCGG------------------------------------------------------------
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---CAACAATGTCCACGAGCAGCTGGGCGGCCATCGCTCTTCGCCTCATGTGGTGCCTCACCACGGCTTGCCGTTCCCGT
CGCTGCTGTCCTTGGCCCCGGTGTCTCAGTTCGTCTTCTACACGCCGGAGGGCGGCTTCGCCATGAAAGACGTCGCCTCC
GATGGTCAGTTCCCCGTAGACAACCTCGGCGATTCGCAAGGCCAGCTCTCGCTGAGCTCGCGGGGAGAAGCTTTCTTCAC
TCAGGAAGCCAGGGTTGATCGATGAATCACCTACGTCGTGGGCATCTGCATGGTCTCTAGCTGCTCCAAGAAGGTGCTTA
TAAATTAATAATCCATAATGCTCTGAGGAGCAGTATTTTACTGTCT---TTATAGGTAAGTTATGCTGTGATTTAAGAAT
ACTTGAGTGGGGATTATTTGGGAGTATTGGGTGTGATGATCAAGTTAAGGTTTTTGCAGCCACTGTGCAATGCAATTCGT
TGCTTTTTTT---ACTACAAGAAGTAATCGTTCATGTATTGACTGGCTTTGTGTAATAACGATCTGGGATTTTGCTTGGG
AGTCTCTGCTTAATAAGTTCATTTTTCTCTT-------------------------------------------------
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>chr1D_1_TraesCS1D01G335300
CCCAGTGTAGTACTAGTCAGCTATCATCAACAGGAGCAGCTC-------TTCCCATCCAT----CTAGGGTTTACACGCA
GATTATCAGTCGCCGCCCGCCAGCTCCCT--------CTCTCCCGCAGCTAGCGGAACTTCGGTGTGCACGGAGGCAATC
GGCCGGCCGGGGCTCGCTCGCGTTCTTCCTCAAAAGCTCAGGCAGC---CAGGGTCACTTCAGCTCAGCTCGCCGCCGCG
CCCTATTAATTCGAGGCGATCTGATCTGCGGGGAGAAGCTGGCTTCCCGGCTGGCCGACGATTTCTCATGCTTGTAAGTT
GCGTTTATAATTGCTTTCTTGGTG--GATCTGCCCAGATTCTGTGATTTCCCGGAGTGTTTCGAGCTCCTTCTTGAGTCG
TAGATCCTCAGATTAATTGGCTAGGGTTGCACTTGCGCTTGGAATCCTGGACCCACATGGAAATCTCAGATGATCTCGAT
CTGATTTTGAAGCTCCCGTGGTTTTCAACTTTTTTTCTTCCTTTTCCCTCTCGCGGTCTCGCCTCCTGTGTCCTGTCGCT
CTTCACTTGGTATTTCCGGCAT---ATGTTGCTAATTTTCTGCCCGGATTTGATGCTTACTAAATGAGTGTACGCGAGGA
GCGAGGATGTAATTCAACTAAATCCTTTCAGCAGGTTTTCAAAGTACATATATTTCCTTAATTGCTACTACTA-GCAAGC
TCACTAAACTCAGTCAGTTAGTGCAGGTGTGAGCCTGTGATAGCAGCGTATGTAGGTTCATTCATCCATAAATCCGTGTA
CAGTGGACAGTGGTTGTAGACTGTAGTGCGATGGATACATGCCGCTACACGTACGGACGGCTACAGTATCCTTGCCACAG
CGTTCTTGTTTCGATGCGGCGCTTTGTCTGTCACTATGTGTGGCGAATAAAGCTGCAAGTGTTCCTCAGTGGCTCA----
GTCAGTGATGCTGAAATCAAGAATCGATTGATATGATCTACTACTACGACAGGGCGAGCACATACGCACTGTGATCGATG
CATATGCAGCAGGCCA-TATCATCATTACCTTATGCTTGATCAATCGACTGCAGGTGCATGCGACGATGAGCGCCTTGAG
ATGATAAGCGCCGGCGACCATGGGAACGACCGCCGGAAGTTCGAGCCGGCGGCGGCC-----------------------
----------TCGCGGCACTGGTCGGCGTCCACGGAGTCGCGGATCGTGCGCGTGTCGCGCGTGTTCGGCGGCAAGGACC
GGCACAGCAAGGTGAGGACCGTCAAGGGGCTGCGCGACCGCCGGGTGCGCCTCTCCGTGCCCACGGCCATCCAGCTCTAC
GACCTCCAGGACCGCCTCGGCCTCAGCCAACCCAGCAAGGTCGTCGACTGGCTCCTCAACGCCGCCCAGCATGAGATCGA
CAAGCTGCCGCCGCTCCAATTCCCGCCGCACGACGACGACCTCCTGCTCTCCGCCCACCACCACCACCATCACCTGCAGC
CGACCTCCTCCATGACGTCCATGGCCATGGCGCCGCCGTTCTCGCACGCCACCGCCACCGCAGCCGCGGCGTCCATGATG
GTCGTCGACGGCGACAAGGCGGCGCAGGCCCACGACGGGGGCGGCGATCTCAAGGGGTTCATGAGCCTGAGCAACTCGCT
CGGCCTGGTCAACGGTGCCGGAGCCGCCATGCCGACGCTGGCTGCGGCCCAAGCCGGGTCGTACCACCACCACTACGCCG
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---------------------------------------------------------------------------CTCAT
GAGGCTTGGAGCAATGGCGG------------------------------------------------------------
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---CAACAATGTCCACGAGCAGCTGGGCGGCCATCGCTCTTCGCCTCATGTGGTGCCTCACCACGGCTTGCCGTTCCCGT
CGCTGCTGTCCTTGGCCCCGGTGTCTCAGTTCGTCTTCTACACGCCGGAGGGCGGCTTCGCCATGAAAGACGTCGCCTCC
GATGGTCAGTTCCCCGTAGACAACCTCGGCGATTCGCAAGGCCAGCTCTCGCTGAGCTCGCGGGGAGAAGCTTTCTTCAC
TCAGGAAGCCAGGGTTGATCGATGAATCACCTACGTCGTGGGCATCTGCATGGTCTCTAGCTGCTCCAAGAAGGTGCTTA
TAAATTAATAATCCATAATGCTCTGAGGAGCAGTATTTTACTGTCT---TTATAGGTAAGTTATGCTGTGATTTAAGAAT
ACTTGAGTGGGGATTATTTGGGAGTATTGGGTGTGATGATCAAGTTAAGGTTTTTGCAGCCACTGTGCAATGCAATTCGT
TGCTTTTTTT---ACTACAAGAAGTAATCGTTCATGTATTGACTGGCTTTGTGTAATAACGATCTGGGATTTTGCTTGGG
AGTCTCTGCTTAATAAGTTCATTTTTCTCTTGTGAGTTTTGTATCTCCATT-AATCTATCTTTGTAATATGATTGGTGCG
TTGTTGTTTGCAACTCTTTCATGTTCTTACAATCCTCGCTTTGTC-GTTGGGGTTATACATGATTAATTGGGGAGTTTCA
ATTTGTATGACTCTTTTCACAAGGACAAAA-ACAATTTCAAAAAAGTAACATAAAA-GTATACTTATTTTGTGCCTACTC
TTTCGGGAAACCACCCTCTCATTCTTTAATTATCAGAATGGTCATATCCGAGTTT--ATTTCATCATTTGGAATTTGAAC
TTTATATCTTTGACTTGTTTTTAGCTTTATTCATTACTATTTATTTAGCTCATCCCATAGAATTGAAAGCATGGTTCACT
CCTACGCCACCCAATATAAACGGGACTAGTGTGATTTGTCAT----TTAAATGGATCATTCAAGATTTTGTGACCCACAG
TTGGG-CACACAGTGCCAATTCGATCGGTTGCAGTCCTGAACATATTATATATGATATTTAAAATTATAGTTGAATAAAA
CCTATAATTCCTATAAGCAGTTAAGCATAGTGCTTTAACAATTTAATAAGAATTTAAAAATAAATTAAAATAGAATGATT
TAATTGGTACACCAGTTTTACTGAACATTTTGCCTATACAATGC--------------------------TTGTTTGACC
AAAATAGATGTTACAAAGTGCACAATCAATAATTAGCATCTGATGCACATAACACTAGGAGTGCTATTTTATTTAGCGAG
GTAAAACAGT--------------TTCACCAATGTTAAAAAA---TATTTCATGGTTGAATTTTTAATAATTCATGCATA
TATAATCAAAGAAGTAACAATCAAAATTATATCAAAGGCTTTGCAAAAGAAAAAC-ATCATTTATTTTGAAGCGTTTGAG
AAGGAAAATGGCTTGATTTTAATCGGTGCTTTAACAATTTGTTGAGAAGCTAAAGAAATGTAATAGTTTGTTTTTAATTG
GTGCCCCATATTTGAACAATGGTTTGCAACTGATCAATAAAACAAG
>chr1B_1
CCCAGTGTAGTGCTAGTCAGCTATCATCAACAGGAGCAGCTC-------TTCCCATCCAT----CTAGGGTTTACACGCA
GATTATCAGTCGCCGGCCGCCAGCTCCCT--------CTCCCGC------GGCGGAACTCCGGCGTGCACGGAGGCAATC
GGCCGGCCGGGGCTCGGTCGCGTTCTTCCTCAAAAGCTCAGCCAGC---CAGGGTCACTTCAGCTCAGCTCGCCGCCTCG
CCCTACTAATCCGAGGCGATT-----TGCGGGGAGAAGCTGGCTTCCCGGCTGGCCGACGATTTCTCATGCTTGTAAGTT
GCGTTTATAATTGCTTTCTTGGTG--GATCTGCCCAGATTCTGTGATTTCCTCGAGTATTTCGAGCTGCTTCTTGAGTCG
TAGATCCTCAGATTAATTAGCTAGGGTTGCACTTGCACATGGAATCCTGGATCCACATGGAAATCTCAGATGGTCTCGAT
CTGATTTTGTAGCTCCCGTGGTTTTCAACTCTTTTTATTTATTTTCCCTCTCGCGGTCTCGCTTCCTGTCA-------CT
CTTGACTTGCTATTTCCGGCAT---AGGTTGCTAATTTTCTACGCGGATTTGATGGTTACTAAATGAGTGTAGGCGAGGA
GCGAGGATGTAATTCAACTAAATCCTTTCAGCAGGTTTTCAGAGTACATATATTTCCTTAATTGCTACTA----GCAAGC
TCACT-AACTCAGTCAGTTAGTGCAGGTGTGAGCCTGTGATAGCAGCGTATGTAGGTTCTTTCATCCATAAATCCGTGTA
CAGTGGACAGTAGTTGTAAACTGTAGCACGATGCATACATGCCGCTACACGTACGGACGGCTACAGTATCCTTGCCACAG
CGTTCTTGTTTCGATGCGGCGCTTTGTCTGTCACTATGTGTGGCGAATAAAGCTGCAAGTGTTCCTCAGTGGCTCACTGA
GTCAGTGATGCTGAAATCAAGAATCGATCGATATGATCTACTGCC---ACAGGGCGAGCACATACGCACTGTGATCGATG
CGTATGAAGCAGCCCATTATCATCATCACCTCATGCTTGATCAATCGATTGCAGGTGCCTGCGACGATGAGCGCCTTGAG
ATGATAAGCGCCGGCGACCATGGGAACGACCGCCGGAAGTTCGAGCCGGCGGCGGCCGGCAACAAGGCCCTGCAGGCGGC
GGCGGCGGCCTCGCGGCACTGGTCGGCGTCCACAGAGTCGCGGATCGTGCGCGTGTCGCGCGTGTTCGGCGGCAAGGACC
GCCACAGCAAGGTGAGGACCGTCAAGGGGCTGCGCGACCGCCGGGTGCGCCTCTCCGTGCCAACGGCCATCCAGCTCTAC
GACCTCCAGGACCGCCTCGGCCTCAGCCAGCCCAGCAAGGTCGTCGACTGGCTCCTCAACGCCGCCCAGCACGAGATCGA
CAAGCTGCGGCCGCTCCAATTCCCGCCGCACGACGACGACCTCCTGCTCTCTGCCCACCACCACCACCATCACCTGCAGC
CGACCTCCTCCATGACGTCCATGGCCATGGCGCCGCCGTTCTCGCACGCCACCGCCACCGCAGTCGCGGCGTCCATGATG
GTCGTCGACAGCGACAAGGCAGCGCAGGCCCACGACGGAGGCGGCGATCTTAAGGGGTTCATGAGCCTGAGCAACTCGCT
CGGCCTGGTCAACGGTGCCGGAGCCGCCATGCCGACGCTGGCTGCGGCCCAAGCCGGGTCGTACCACCACCATTACGCCG
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---------------------------------------------------------------------------CTCAT
GAGGCTTGGAGCAATGGCGG------------------------------------------------------------
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---CAACAATGTCCACGAGCAGCTGGGCGGCCATCGCTCTTCGCCTCATGTGGTGCCTCACCACGGCTTGCCGTTCCCGT
CGCTGCTGTCCTTGGCCCCGGTGTCTCAGTTCGTCTTCTACACGCCGGAGGGCGGCTTCGCCATGAAGGACGTCGCTTCC
GATGGTCAGTTCCCCGTAGACAACCTTGACGATTCGCAAGGCCAGCTCTCGCTGAGCTCGCGGGGAGAAGCTTTCTTCAC
TCAGGAAGCCCGGGTTGATCGATGAATCACCTACGTCGTGGGCATATGCATGGTCTCGAGCTGCTCCAAGCAGGTGCGTA
TAAATTAATAATCCATAATGCTCTGAGGAGCAGTATTTTACTGTCT---TTATAGGTAAGTTATGCTGTGATTTAAGAAT
ACTTGAGTGGGGATTATTTGGGAGTATTGGGTGTGATGATCAAGTTAAGG-TTTTGCAGCCACTGTTCAATGCAATTCGT
TGCTTTTTTTTTTACTACAAGAAGTAATAGTTCATGTATTGACTGGCTTTGTGTAATAACGATCTGGGATTTTGCTTGGG
AGTCTCTGCTTAATAAGTTCGGTTTTCTCTTGTGAGTTTTGTATGTCCATTAAATCTATCTTTGTAATATGATTGGTGCC
CTGTTGTTTGCAACTCTTTCATGTTCTTGCAATCCTCCCTTTTGTTGTTGGGGTCATACATGATTAACTGGGGAGTTTCA
ATTTGTATGACTCTT-TCACAAGGAC-AAA-ACAATTTCAAAAAAGTAACATAAAAAGTATACTTATTTTGCGCCTACTC
TTTCCGGAAACCATCCTCTCATTCTTTAAGAATCAGAATGGTCATATCCGAGTTTCCATTTCACCATTTGGAATTTGAAC
TTTATATCTTTGACTTATTTTTAGCTTTATTCTTTA---TTTATTTAGCTCATCCCATAGAATTGAAAGCATGGTTCACT
CCTACGCCACACAATATAAACGGGACTAGTGTGATTTGTCATTTAGTTAACAGGATCATTCAATATTTTGTGACCCACAG
TTGGGACACACACTGCCAATTCGATCGGTTGCAATCCTGAACACATTCTATATGAGATTTATAATTGCAGTTGAATAAAG
CCTATAATTCATATTAGCAATTAAGCATAGTGCTTTAGAAATTTAAGAAGTTT----AAAATAAATAAAATAGCATGATT
TAATTGGTACGCCAGTTTTACTGAACATTTTGCCTACACAATGT--------------------------TTGTTTGAAC
AAAATAGATGATACAAAGTGCACAATCAATTATTAGCATCTGATGCACATAACACTAGGAGTGCTATTTTATTTAGGGAG
TTAAAACAGT--------------GTCACCAATGTTAAAAAA---TTCATGGTTGA--AAATTTTAATAATTCACGCATA
TATATTCAAAGAAGTAACAATCAAAATTATATCAAAGACTTTGCAAAGGGAAAGC-ATCATTTATTTTGAAGCTTTGTTG
AAAGAAAATGGCTTGACTTTAATCGATGCTTTAACAATTTGTTGAGAAGGAAAAAAAGTGTAATATTTCGTTTTTAATTG
GTGCCCCATATTT---------------------------------
>chr1A_19
------------------AGCTATCATCACCAGGAGCAGCTCCCTCCCTTTCCCATCCAGCTAGCTAGGGTTTACACGCA
GATTATCAGTCGACGGTCGGCAGCTCCCTCCCTCCCGCTCCCGC------AGCGGAACTCCGGCGTGCACGGAGGCAATC
GGCCGGCCGGGGCTCGCTCGCGTTCTTCCTCAAAAGCTCAGCCAGCCTGCAGGGTCACTTCAGCTCAGCTCGCCGCCTCG
CCCTATTAATTCGTGGC-----GATCTACGGGGAGAAGCTGGCTGCCCGGCTGGCCCACGATTTCTCATGCTTGTAAGTT
GCGTTTATAATTGCTTTCTTGGTGTAGATCTGCACAGATTCCGTGGTTTCAGTGAGTATTTCGAGCTCCTTCTTGAGTTG
TAGATCCTCGGATTAATCAGCCAGGGTT------GCACCTGGAATCCTGGATCCCCATGGAAATCTCGGATGGTCTCGAT
CTGGTTCTGATGCTCATCCCATGG-------TTTTCATTTTTTTTCCCTTTTCCC-TCTCGTCTCCTGTCA-------CT
TTTCACTAGCTATTTCCGGCATGGTATGTTGTTAATTGTCTACCAGAATTTGATGGTTACTAAATGAGTGTAAGCGAGGG
GGATGTA-GTAATCCAACTAAATCC-TTCAGCAGGTTTTCAAAGTACATATATTTCCTTAATTGACACCGGCCGGCAAGC
TCACTAAACTCAATCAATTAGTGCAGGTGTGAGCATGTGATAGCAGCATATGTAGGCTCATTCATCCATTAGCTCACTAA
ACTT---CAGTAGTTGTAGACTGTAGCACGATGCATACATGCCGCTACACGTACGGACGGCTACAGTATCCTTGCCACAG
CGTTCTTGTTTCGATGCGGCGCTTTGTCTGTCACTATGTGTGGCGAATAAAGCTGCAGGTGTTCCTCAGTGGCTCA----
GTCAGTGATGCTGAAATCAAGAATCGATTGATATGATCTACTACTACGACAGGGCGAGCACATACGCACTGTGATCGATG
--------------CA-TATCATCATTACCTTATGCTTGATCAATCGACTGCAGGTGCATGCGACGATGAGCTCCTTGAG
ATGATAAGCGCCGGCGACCATGGGAACGACCGCCGGAAGTTCGAGCCGGCGGCGGCCGGCAACAAGGCCCTGCAGGCGGC
TGCGGCGGCCTCGCGGCACTGGTCGGCGTCCACGGAGTCGCGGATCGTGCGCGTGTCGCGCGTGTTCGGCGGCAAGGACC
GCCACAGCAAGGTGAGGACCGTCAAGGGGCTGCGGGACCGCCGGGTGCGCCTCTCCGTGCCCACGGCCATCCAGCTCTAC
GACCTCCAGGACCGCCTCGGCCTCAGCCAGCCCAGCAAGGTCGTCGACTGGCTCCTCAACGCCGCCCAGCACGAGATCGA
CAAGCTGCCGCCGCTCCAATTCCCGCCGCACGACGACGACCTCCTGCTCTCCGCCCACCACCACCACCATCACCTGCAGC
CGACCTCCTCCATGACGTCCATGGCCATGGTGCCGCCGTTCTCGCACGCCACG------GCAGCCGCGGCGTCCATGATG
GTCGTCGACAGCGACAAGGCAGCGCAGGCCCACGACGGAGGCGGCGATCTCAAGGGGTTCATGAGCCTGAGCAACTCGCT
CGGCCTGGTCAACGGTGCCGGAGCCTCCATGCCGACGCTGGCTGCGGCCCAAGCCGGGTCGTACCACCACCACTACGCCG
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---------------------------------------------------------------------------CTCAT
GAGGCTTGGAGCAATGGCGG------------------------------------------------------------
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---CAACAATGTCCAGGAGCAGCTGGGCGGCCATCGCTCTTCGCCTCATGTGGTGCCTCACCACGGCTTGCCGTTCCCGT
CGCTGCTGTCCTTGGCCCCGGTGTCTCAGTTCGTCTTCTACACGCCGGAGGGCGGCTTCGCCATGAAAGACGTCGCTTCC
GATGATCAGTTCCCCGTAGACAACCTTGACGATTCGCAAGGCCAGCTCTCGCTGAGCTCGCGGGGAGAAGCTTTCTTCAC
TCAGGAAGCCAGGGTTGATCGATGAATCACCTACGTCGTGGGCATATGCATGGTCTCTAGCTGCTCCAAGAAGGTGCGTA
TAAATTAATAATCCATAATGCTCTGAGGAGCAGTATTTTACTGTCTTTATTATAGGTAAGTCATGCTGTGATTTAAGATT
ACTTGAGAGGGGATTATTTGGGAGTACTGGGTGTGATGATCAAGTTAAGG-TTTTGCAGCCTCCGTGCAATGCAATTCGT
TGTTTTTTTT---ATTACAAGAAGTAATAGTTCATGTATTGACTGGCTTTGTGTAATAACGATCTGGGATTTTGCTTGGG
AGTCTCTGCTTAAGAAG-TCGGCTTTCTCTTGTGAGTTTTGTATCTCCATTAATCA-ATCTTTGTAATATGATTGGTGCG
TTGTTGTTTGCAACTCTTTCATGTTCTTGCTATCCTCCCTTTTGTTGTTGGGGTTATACATGATTGATTGGGGAGTTTCA
ATTTGTATGACTCTT-TCACAAGGAC-AAAAACAATTTCAAAAAAGTAACATAAAA-GTATACTTATTTTGCGCCTACTC
TTTCGGGAAACCACCCTCTCATTCTTTAAGAATCAGAATGGTCATATCCGAGTTTCCATTTCATCATTTGGAATTTGAAC
TTTATATCTTTGACTTATTTTTAGCTTTATTCTTTT---TTTACTTAGCTCATCCCATAGAATTGAAAGCATGGTTCACT
CCTATGCCACCCAATATAAACGGGACCAGTGTGATTTGTCATTTA----ACAGGATCATTCAAGATTTTGTGACCCACAG
TTGGGACACACACTTCCAATTCGATCGGTTGCAATCCTGAACATATTATATATGAGATTTAAAATTGTAGCTGAATAAAG
GCCATAATTCGTATAAGCAATTAAGCATAGTGATTTAACAATTTAATAGGAAGTTTAAAAGC-----AAATTGCATGATT
TAATTGGCATGCCAATTTTACTGAACTTTTTGCCTATACAATGCTTTTTTTGCGGGTGCCTATACAATGATTGTTTGACC
CAAATAGATGTTACAAAGTGCACAATCCATTATTAGCTACTGATGCACATAACACTAGGAGTGGTATTCTATTTAGCGAG
GTAAAACAGT--------------GTCACCGATGTTTAAAAATATTTCATGGTTGA--AAATTTTAATAATTCAGGCATA
TATATTCAAAGAAGTAACAATCAAAATTATACCAAAGACTTTGCAAAATAAAAAA-ATCATT-ATTTTTAAGTGTTGGAG
AAAGAAAATGGCTTGATTTTAATCGGTGCTTTAACAAGTTGTTGAGAAGCTAAAAAAATGTAATAGTTCGTTTTTAATTG
GTTCCCCATAGTTT--------------------------------
>chr2A_1213
CCGCCACTG-----------------------------------------------------------------------
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--------AAGGTGAGGACCGTCAAGGGGCTGCGCGACCGCCGGGTGCGCCTCTCCGTGCCCACGGCCATCCAGCTCTAC
GACCTCCAGGACCGCC-CGGCCTCAGCCAGCCCAGCAAGGTCGTCGACTGGCTCCTCAACGCCGCTCAGCACGAGATCGA
CAAGCTTCCGCCACTCCAATTCCCGCCGCACGACGACGATCTCCTGTTCTCCGCCCACCACCACCACCATCACCTGCAGC
CGACCTCCTCCATGACGTCCATGGCCATGGCACCGCCGTTCTCGCACGCCACTGCCACCGCAGCCGCGGCGTCCATGATG
GTCGTCGACAGCGACAAGGCGGCGCACGCCCACGACGGGGGCGGCGATCTCAAGGGGTTCATGAGCCTGAGCAACTCGCT
TGGCTTGGTCAACGATGCTGGAGCCGCCATGCCGACGCTGGCTGCGGCCCAAGCCAGGTCGTACCACCACCATTACGCCG
CTCAGGGCATCTTCAGCCGTTGGCCCTTCAGGAGGGGCAAAAAATCGCCCCCTGAGGGTGCACCGGCGCTAAACCGCGCA
TTGGGGGCGTGATGCCCCCCAGTCGCGGCCCCCCACGGAATTTTAAAAAAGTCAAATACGGCGCAAACACGACTCAAATT
TAACGCAAACATCGACGAGTTCGTTCAAATTTAAACATACTTTAAAAAAAAGGAAAAACTACCGCGGGCTACCCCCGCCG
TCTCCCTCGCCGCCCGCCTCGCCGCCCGCCCACGCGGTTCTACATGCCGAGGAGGCGGTAGAACCGCGTGTAGTCACCGC
CGCCGCCGCCGCCGTCGTCGTCGTCGTCCCTGCCGACGCCTCCGCCGTCCCTGCTGCATCCCTCCCCCGGTTGGCGCGGC
GGGTTGGACGGTCCGGGGGCGTCGTCGTCGTCGTCGTTGAGGACCACGATGCCGTGCTCGTCCTCGCGCCCACGCTTGCG
GGCGGCGATATCCTCCAGGGCCCGGCGCTGACGGACCATCTCGTCGCGGAGGTAGTCGTCCCGCGCCCACCGCAGGGCGT
CCTCGTCGGAGAAGCCACGCCGGGCTATCTTCTCGTACTCCACGGGGAGGCCGGGCTCTGGCTTGGGCTCCGGCTTGGGC
TCGACGAGGACGAAGCGGCCGGTGGGGGAGGCGTTGTCGCCGATGCGGACACCGGAGCTGCGGGTGCGCGCGCTGACAGG
CGCGCCCTGGGGCTCCGGCTTGACGGGGCGGAGGTGGAGGTAGGGGGAGCCGCCGGACGAGGAGGAGGACCCCCCGGTCT
CCATGCGCCTCGGGGTCCAGAAGCTTCCCCGGCGGCATGTGAAGGACGGGGGAGAGGGGTACTCGAGGCACGGCGTGTTG
CCGCCCTCGATGTACTCGAGGACGGCCTCCAACGTGCGCCCGGGCACGCCCCACCACCGACGCCGGCCGACGGTGTTGAG
CCTGCCGGAGGGCTCAACGCCGTTGGTGGCCTCGAGCTGCTCGGCGTGACGGCGGCGGAAGTAGGGCTTCCAGAGCGGGC
TGTCGGGGACGTACCGTGGCCCCTCCCTCACCGCACGCGGCAGGGACGAGCGGATGCGTGCGATCTCCGCACGCCTCGCC
GCGCCGGTGGGTATCGGGGGCACCGGCACGCCGCCGACGCTGATCCTCCACGCCCCGGGTACCCGCATGTCCGGCGGGAC
CGGGTACTTGGCCTCGAAAAGGAGGCGAGCCTCGCTCTCGTGAAGATGGCGGCGGTCGAAGCCGTTCGCCGCCGCGCTGT
CGCCTGGGAAGCGCTCGGCCATGGGTGCTGAAGACGGCGAGAGAGAGGAGAGGGAGGAACGACGACGGCGAGAGAGAGGA
GAGGGAGGAACGACGACGACGAGAGAGTACGAGTCGCCGAGTGCTCTGGGGCGCGTCTTATATAGGCCGAGGCGCCGCCC
GGGCGTGAGCCGCCGTGAGTACGCGTGACGGGCAAGGGAGGGCGAGGGACGCGCGTCATCCGGTCTTCACTGCGCCGCCC
GTGAGGCATCAATGGCGCAGGCTGACCGGCGCGTTAGCGCGGCAGCTTTGGCATTGATTCGCCACGAGAAACGAGGCGAT
GAGGACGACGAAGAGCCGAGAAGAGGGTAGAGTCGCTGACGCGGCGGGCCCGCGGCTGTTTCGCGCCAAAACAGTTCCCT
CCGCAGCGCGCCGGGTTCGGCCTGGGTCTGCTGGCGCTGTTTTCGGCCCAAGCCGGCGAAAATCGGGCTCCTGGGAGCAC
GACTGGGCCGATTTTTCGGCGCCGGCGTAAAAAAAACGCCCGAGGAGGCCTTGCTGGGGCGCGGCTGGAGATGCCCTCAT
GAGGCTTGGAGCAATGGCGCCAATAATGCGAAAATATATATTAGAGCATCTGCACCCCGGTCCGGTTATCTCAGCCGTTT
GTTTCCTCAGGGATCCGCGTCATTCACAGGGGCAAAACAAAGTCACGGGCACGTTTTGGTCCTAACCTTGTTGGGATGTA
CATGCCTATGCATGTGATCAGTCTAGGTTTGGAGTATATGGTACTGTTCAACCCACAACTGTTCACACCGCATGCAGTAC
AAGAAGACAACCGGGTCAGACAATTTTCTTGGAACACATGGAGAGTCACTGCGTGCACTTCTTGCCTCCTGCTATTTCCA
TTGCTTCTGTTTTCTAAAAATGAAGAAGAGCCTAGACGGCCTGTCCAATTTTCGGTTGCCCATGTTAGGAACTGAAAGAG
TGAAAATGAGAGTGAGAGAGAGATGCATCATGCATGCATGCAGAAGTAGAGAGAGAGAGAGAGAGAGAGTATCCATGAGC
TCCAACCAGAGCTGGCTAGCTCTGTCTTCTCTCTCTTCCCTTAGTTTGCATGAGCTCCATCTTGTATTCATGGCGGACGA
GCGCCCAACTCATGAGAATGAGAGATGCATGCAAAGATTTGTGTTCTCTCCATCTATTGAGCGAAGGTTGGGAGTGAGAG
AGAGAGAGAGAGTATTCATGCGCTCCAACTAGAGCTGGCTAGCTCGGTCTTCCCTCTCTTTCTTCACTTGCATTAGCTCC
ATCTTTTATTCATGGCGGACGAGCGCCCAACTCATGAGAATGAGAGAGATGCATGGAAAGATTTGTGTTATTTCCATCCA
TTGGTAGTCACGGGTGCGCGTCTGTATGCTGGGGCGCTGTAAGACAAGATTCCGCCATGTTAACGGATACACTAAAACTG
GAACTGGAATTGTGACAGGTATCTCGAGGTACAGGTCCTACCTGCCATGTTAACGGATACACTAAAACTGGAATCTGTGA
CAGGTATCTCGAGGTACAGCGCCATAACTCAACGGCAAGGATAACGCGGCCGGGGTGCAGGCGCTCAAAAAATCCGCATC
CGCCAACAATGCCCACGAGCAGCTGGGCGGCCATCGCTCTTCACCTCATGTGGTGCCTCACCACGGCTTGCCGTTCCCGT
CGCTGCTGTCCTTGGCCCCGGTGTCTCAGTTCGTCTTCTACACGCCCGAGGGCGGCTTCGCCATGAAAGACGTCGCCTCC
GATCATCAGTTCCCCGTAGACAACCTCGACGATTCGCAAGGCCAGCTCTCGCTGAGCTCG--GGGAGAAGCTTTCTTCAC
TCAGGAAGCCAGGGTTGATCGATGAATCACCTACGTCGTGCCTATACAATG-----------------------------
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-------------CTTGTTTTTGCGGG-----------------------------------------------------
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------------------------------TGCCTATACAATGC--------------------------TTGTTTGACC
AAAATAGATGTTACAAAGTGCACAATCAATTATTAGCATCTGATGCACATAACACTAGGAGTGGTATATTATGGTTGAAA
TTTTTAATAATTCACGCATATATATTCACCAATGTTTAAAAATATTTCATGGTG---GAAATTTTAATAATTCACGTATA
TATATTCAAAGAAGTAACAATCAAAATTATATCAAAGACTTTACAAAAGAAAAAACATCATT-ATTTTGAAGCGTTGGAG
AAGCAAAATGGCCTGATTTTAATCGGTGCTTTAACAATTTGTTAAGAAGCT-AAAAAATGTAATAGTTCGTTTTTAATTG
GTTCCCCATATTT---------------------------------
>SNPs
-----------S--------------------------------------------------------------------
---------------S------------------------S-S-SSSSSS---------S---S----------------
-----------------------------------------S-----------------------------------S--
--------------------SS----------------------------------------------------------
---------------------------------------------------SS----S----------------------
------------------S-----------------S-S------------S--------------------S-------
------------------------------S-----S--SS----------------------------SSSSSSSSS--
---------S-------------------------------S-------------S----------------S-------
----------------------------------------------------------------------SSS-------
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-----------S--------------SS-----S----------------------------------------------
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-S----S-----S-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-S------------------------------------------------------------------------------
-----------------------------S-----------------------------------------S--------
--------------------------------------------------------------------------------
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---------S----------------------------------------------------------------------
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----------------------------S---------------------------------------------------
---------------------------------------------S-------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
----------------------------S---------------------------------------------------
--------------------SS----------------------------------------------------------
----------------------------S--------S----SSS-----------------------------------
---------------S----------S--------------------------------------------S--------
-----------------------------SS-------------------------------------------------
--------------------------------S---SSS-----------------------------------------
--------------------------------------------------SS----------------------------
------------S--------------------S---------------------S----------S------------S
----------S--------S-----------------------------------S----SS--S--------S------
----------S---------------------------------------------------------------------
------------------------------S-------------------------------------------------
----------------------------------------------SSS-SS---SS---S-------------S-----
----S--------------------------------S--------------------------------------S---
------------------------------------------------------S-------------S-----------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_570
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TCCTGTCGCT
CTTCACTTGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>reverse_4926
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CTGCATGGTCTCTAGCTGCT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>forward_1042
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TACGCACTGTGATCGATG
CA------------------------------------------------------------------------------
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>reverse_5693
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GTGCCAATTCGATCGGTTGC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
