>input_sequence_55043
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-----------------ATGCCGTCCGCCTCCAGCGCCGTCCCACCCGCCGCGGCGCCGGGAGACGAGTCCCAATCCCA-
--------GAAGGTCCTCCTCGGGAGGTACGAGCTGGGCGGGCTCCTCGGCCGCGGGGCGTCCGCCAAGGTGTACCGGGC
CAGGGACCTCCTCACGGGCCGGGACGTGGCCATCAAGTCCTTCCCCAACCCGCGCGCCGGCGGGCGCGACGGCGAGGGCT
CGGCCGGGACCGCCGCCATTGAGCGGGAGGCGGCCATCCTCGCCCGCCTGCGCCACCGCCACGTCGTGAGGCTGCACGAG
ATTCTCGGGACCCGCAAGAAGGTCCACTTCGTCCTCGACCTCGCCACCGGCGGCGAGCTCTTCTCGCTCGTCGACTCCGA
CGGCTGCATGACGGAGGACCTCGCGCGGTATTACTTCCGCCAGCTCGTGTCCGCCGTCCGCTACTGCCACTCCCGCGGCG
TCTACCACCGCGACATCAAGCCGGAGAATTTGCTGCTCGACGGCGACGGCGACCTCAAGGTCGCCGACTTCGGCCTCGGC
GCCGTCGCGGACGAGAGCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTCGCGCCGGAGATTCTCTCGAAGCAGGG
GTACCACCCGGCCAAGGTCGACATCTGGTCCTGCGGCGTGGTGCTCTTCGTCCTCGCCGCCGGCTACCTCCCCTTCAACG
ACGCCAGCCTCATCAACATGTACCGCAAGATCTACGCCGGCCGGTTCCGGTGCCCGTACTGGTTCTCGCCGGCGCTGCGC
CACCTGCTGCGCCGCATCCTCGACCCCAACCCGGCCACGCGCATCGACACGGACGGCATCCTGGAGCACCCCTGGTTCCG
CCACGGCGCGAGCGG---CGACGGCGAGCTGGAGAAGCTGATGCGCGGCCACGAGGAGGAGGCGTGGTTCAAGACGGAGT
TCAAGGAGGACATGGCCCGCGACATGACCGCGTTCGACATCCTGGCCTTCTCGCCCGGCTCGGACCTCTCCGGGCTGTTC
GTCGCCGGGCCGGGCACGGAGCGGGTGTTCGTGGGCGAGCCCGCCGCGGCCGTGCTGGCCCGGGTCGAGGACGCCGGGAA
GAAACAGGGCTACGGCGTGAGGAGGGAAGGGAAGGGCCGCGCCGGGCCGGTGTACGTGGAGGCGGAGGCCGGCGGCATTG
TCGCCAAGGTGACCGTGTTCCGGATCGCCGACGCGGTGTCGGTGGTGGAGGTCGTCAAGGGCCACGGCGCGGAGGCCGCG
GCGTTCTGGAGCGACTGGCTCGAGCCGGCCGTGAAGCCTCAGGCAGTGTGA-----------------------------
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>chr2A_1_TraesCS2A01G106500
TAGCCGTCGGTGCATGGACCTTCCATCTCGCATCCATCATCGATGGCATTCCGCATTGTCATCGCCTCTGTTTCGACCCA
TGCTAGCCTCCGACTTCTATGCAGCCCCACGTTGTCATTGTTTCCT-CCTTACATGAGATACAATCTCAAAGAGATCGCA
TTGCTAAAAACTCGCCCGTGATCCGCA-AAGATCTCATTTCTCTAATTGATGCATGGTTTTCACCCTAAACTCCGACCAT
CGATGCATGAACCTTCCTTCTCCAATTCTCCGTCGACGAGATTCCGTGTTGTCACGACCTCCGCCTCAGACCCTCGGTAC
ATTACAGCCTCCGACGTCGCTACCCGACCCATGTCAGCACAATTCCCACCCTACTAATGGGAG----AATCCCAAATAAA
TCGCAGAGTTAAAAGCTCGGACCGTGATCGGCACAAATCAAACCTCTCATTGATCCACAAACACGCATGCACCACCACCT
CACAAATTGAGAGAATATGCATCAAGCCCAAACACAATCATCCCACTCCCCCATCAACTTATCCCTCTTCAAAGCCCAGA
CCTGACCCGTACCATCCTCCCCAACCACTAAAACCTGACCGTCCAAAACTCC--------------------CAACAGCA
ACAGCACACGGTAGCCGTCGTTGCACCGTACGTCCAAACCGTACCATGCATGCAACAATAAATCAATAATTCGTTTAAAT
ACAATATATAAAACTCTGAAAATA-TACGAGAATCGGAACCACAATTAGTGAGCAGCAGCGCGTCGTGTTAGCAAGAAGA
AACTTCCCGGCTGCTGCCACAGCGGCAGCACTTAA-CACCACAACACGCGG-----------------------------
---------------------------------------------GCCCCAGATCGTCTTCAACCCAGGAACCAGAAG-A
G--------------AATCCCAACCCCCGAGACAACTCTCCGGCCCGAACACG--------------------CTCCCAT
CTCTTTTCTCGCCGCCGATCCAGCCGGGGAAAATTACTACCGCACAGTCACGACCGCGCACGGCGACGGCGGCCACACAG
CATACCCCGCCGCCACGATGCCGTCCGCCTCCAGCGCCGTCCCACCCGCCGCGGCGCCGGGAGACGAGTCCCAATCCCA-
--------GAAGGTCCTCCTCGGGAGGTACGAGCTGGGCGGGCTCCTCGGCCGCGGGGCGTCCGCCAAGGTGTACCGGGC
CAGGGACCTCCTCACGGGCCGGGACGTGGCCATCAAGTCCTTCCCCAACCCGCGCGCCGGCGGGCGCGACGGCGAGGGCT
CGGCCGGGACCGCCGCCATTGAGCGGGAGGCGGCCATCCTCGCCCGCCTGCGCCACCGCCACGTCGTGAGGCTGCACGAG
ATTCTCGGGACCCGCAAGAAGGTCCACTTCGTCCTCGACCTCGCCACCGGCGGCGAGCTCTTCTCGCTCGTCGACTCCGA
CGGCTGCATGACGGAGGACCTCGCGCGGTATTACTTCCGCCAGCTCGTGTCCGCCGTCCGCTACTGCCACTCCCGCGGCG
TCTACCACCGCGACATCAAGCCGGAGAATTTGCTGCTCGACGGCGACGGCGACCTCAAGGTCGCCGACTTCGGCCTCGGC
GCCGTCGCGGACGAGAGCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTCGCGCCGGAGATTCTCTCGAAGCAGGG
GTACCACCCGGCCAAGGTCGACATCTGGTCCTGCGGCGTGGTGCTCTTCGTCCTCGCCGCCGGCTACCTCCCCTTCAACG
ACGCCAGCCTCATCAACATGTACCGCAAGATCTACGCCGGCCGGTTCCGGTGCCCGTACTGGTTCTCGCCGGCGCTGCGC
CACCTGCTGCGCCGCATCCTCGACCCCAACCCGGCCACGCGCATCGACACGGACGGCATCCTGGAGCACCCCTGGTTCCG
CCACGGCGCGAGCGG---CGACGGCGAGCTGGAGAAGCTGATGCGCGGCCACGAGGAGGAGGCGTGGTTCAAGACGGAGT
TCAAGGAGGACATGGCCCGCGACATGACCGCGTTCGACATCCTGGCCTTCTCGCCCGGCTCGGACCTCTCCGGGCTGTTC
GTCGCCGGGCCGGGCACGGAGCGGGTGTTCGTGGGCGAGCCCGCCGCGGCCGTGCTGGCCCGGGTCGAGGACGCCGGGAA
GAAACAGGGCTACGGCGTGAGGAGGGAAGGGAAGGGCCGCGCCGGGCCGGTGTACGTGGAGGCGGAGGCCGGCGGCATTG
TCGCCAAGGTGACCGTGTTCCGGATCGCCGACGCGGTGTCGGTGGTGGAGGTCGTCAAGGGCCACGGCGCGGAGGCCGCG
GCGTTCTGGAGCGACTGGCTCGAGCCGGCCGTGAAGCCTCAGGCAGTGTGA-AAAAGCTGCCGAGTGCGAGCCGGGTCGG
GAATATCATATCGCCTC-----GCCGTGCCGTGCCGGCGCCGGCATGCCGCCGCCGCCGAGGGCGCGTGTGGTCGGAGAT
TTGTTGTTTCAAACTTCCAATGGCGAATTCGTTTGGTTTTTCTTTTCTTTGGGTCGTGTTTGAACTTGCAATGGCATGCC
ACGGCACTGCAAGTGTGCTGGTGACTGCAAAACCTGGTCGGCGGACCTGCTCTGTAT-ATATTGTGGGAGGGA---AGAA
TTCTTGCCAACTCGAGGCAACAATCGCCGTCATCAACAACTCACAGGG--------CCTGCGCACGACCGCATCGACCGC
CGGCATGAACCTCGCCTC-----------------------CCGGGCGGGGCGGAGAAGTACAATGAACCCGGACCGAAA
ACTTGCACAGAAGCACAACGACCG------CGGTGGCGGCGCCATCGAACTCTCGGCTCGACGAGTCAACTATAGGCCT-
----------------------ATAGCAGGAGAGCAAGATATACAGGGGGCTGCCGGCGGACGGCGGCGCGGTTTGGTGA
AGAATATGATCGCCTTGCCGCGGCGGGCTGCCGGCGGACGGCGGCGCGGGTCGAGATTTTGATGC---------------
--TTCCTATTTGGTGCAGTGCGTGAGCAGGATGTGCGCGTGCCATCCGGTGGCCGGCGACGTGCATCCATA--ATTCCAG
CGCAAGGAGGAGTA------------------------------------------------------------------
-------------------------------------------GAGCATGATGGAAGAAAATTCT-TGCGAGCGCAGACA
AAGTTGTCGTCGTCGGAGAAGGCGCGCACGGACGCAGCGGCGGCACCGATGGATGAATCTTTTACCCTGTCAACCCTGCG
CAAGAAAAGGAAAGACGTTCGGCTCCTCAACTGCAGCCGCGACTGCTC--------------------------------
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-------AATCGTGCAGGCCGCTTGGCCTGCCAAAAACAGAGCATTTTCCATGGAATCCTCGGCACCTAACGGTCGTGGC
TGGTCGTTGGCGTGGAGTAATCAGTGCGCGTACCGATCATCGGTGCCGTGTGCGTGCGTTTCGGC--TATAGGCTGCCTA
CGAGATCTGAT
>chr2B_1
TAGCCATCGATGCACGGACCTCCCGTCTCCTATCCTTCATCGACGTCATTCCACATTGTCATCACCTCCATCC-------
------CCTCCGACTTCGCTGCCGCCCCACGTTGTCGTTATTTGCTTCCTTACTCGAGAGAGA-----------ATCACA
GTGTCAAAACCTCCACTGTGATGGGCAGAAAATATCTTTTCTCAGATTGATGCACGGCTT-CACCCTAGACTCTAATCGT
CGATGCACGAACCTTCCTTCTCCTATTCGTC-TCGACGCGATTCTGCGGTGTCACCACCTCCGCCTCGGACCCTCGGAAC
ATTCTAGCCTCCCATGCCGTTGCCAACCTGCGGTGT-CACCATTCCCACCTTACACATGGAAG----AATCTCAAAGAAA
TCGCGGAGTTAAAATCTAAGACCGTGATCTTCAAAGATCAAAATTCTCATTCATCCTCAAA----CATGCACCACCACCT
CACAAAT---GAGAACATTCATCAAACCCAAACACAATCATCTCACTACCACTTCAATCCAGCCCTCTTCAAAGCCCTGA
CT------GTATCATCCTCCCCAACCACTAAAACCCGACGGTCCAAAACTCCTCGCCATTCACTCCG------AACAGCA
ACAGCACACGGTAGCTGTCGTTGTACCGTACGTCCAAACCGTACCATGCATGCAACAATAA--------TTTGTTTTAAT
ACAAATA--AAATCTCTGAAAATA-TAAGAGAATCGGAACCATAATTAATG---AGCAGCGCGTCGTGTTA---AGAGGA
AACTTCCCGGCCGCTGCCACAGCGGCAGCAGTTAAACACCACAACACGCGGGCCCCACCGGTCATACTGACCGTGGGCCC
GCGGCTCCTCCCCCGCAGCCCCGCATAAATAGCTCCCCCGGTGGCGCCCCAGATCGTCTTCAACTCCAGAACCAGAGCGC
AGCAGAATCCATACCAACCTCAACCCCCGAGAGAACTCTCCGGCCGGAGCACGGGAGCGACCGACCGAGCGATCCCCAAT
CTCTTTTCCGGCCGCCGATCCAGCCGGGGAAAATTACTACCCCACAGTCACGACCGCACACTGCGACGGCGGCGACAGAG
CATACCCCGCCGCCACGATGCCGTCCGCCTCCAGCGCCGTCCCATCCGCCGTGGCGCCGGCAGACGAATCCCAATCCCTC
GCCGCCCCGAAGGTCCTGCTCGGGAGGTACGAGCTGGGCGGGCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTACCGGGC
CAGGGACCTCCTCACGGGCAGGGACGTGGCCATCAAGTCCTTCCCCAACCCGCGGTCCGGCGCGCGCGACGGCGAGGGCT
CCGCCGGGTCCGCCGCCATTGAGCGGGAGGCGGCCATCCTCGCCCGCCTGCGCCACCGCCACGTGGTGAGATTGCACGAG
ATACTGGGGACGCGCAAGAAGGTCCACTTCGTCCTCGATCTCGCCGCCGGCGGGGAGCTGTTCTCGCTCGTCGACTCCGA
CGGCCGCATGACGGAGGACCTCGCGCGGCATTACTTCCGCCAGCTCGTGTCCGCCGTCCGGTACTGCCACTCCCGCGGCG
TGTACCACCGCGACATCAAGCCGGAGAACCTCTTGCTCGACGGCGACGGCGACCTCAAGGTCGCCGACTTCGGGCTCGGC
GCCGTCGCGGACGAGAGCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTTGCGCCGGAGATCCTCTCGAAGCAGGG
GTACCACCCGGCCAAGGTCGACATCTGGTCCTGCGGCGTGGTGCTCTTCGTCCTCGCCGCCGGCTACCTCCCCTTCAACG
ACGCCAGCCTCATCAACATGTACCGCAAGATCTACGCCGGCCGGTTCCGGTGCCCGAACTGGTTCTCGCCGGCGCTCCGC
CACCTGCTACGCCGCATCCTCGACCCCAACCCGGGCACGCGCATCGACACGGACGGCATCATGGAGCACCCCTGGTTCCG
CCACGGCGCGAGCGG---CGACGGCGAGCTGGAGAAGCTGATGCGCGGGCACGAGGAGGAGGCGTGGTTCGAGACGGAGT
TCAAGGAGGACATGGCGCGGGACATGACCGCGTTCGACATCCTGGCCTTCTCGCCCGGCTCGGACCTCTCCGGGCTGTTC
GGCGCCGGGCCGGGCACGGAGCGGGTGTTCGTCGGCGAGCCCGCCGCGGCCGTGCTGGCCCGGGTCGAGGACGCCGGGAA
AAAGCAGGGGCACCGCGTGAGGAGGGAAGGAAAGAGCGGCGCCGGGCCGGTGTACCTGGAGGCTGAGGCCGGCGACATTG
TCGCCAAGGTGACCGTGTTCCGGATCGCCGACACCGTGTCCGTGGTCGAGGTCGTGAAGGGCCACGGCCCGGAGGCCGCG
GCGTTCTGGAACGACTGGCTCGAGCCGGCCGTGAAGCCTCAGGCAGTGTGAAAAAAGCTGCCGAGTGCGAGCCGGGTCTG
GAACGTTATGTCGCCTCGCCGTGTCG----GTGCCGGTGACGGCATGCCGCCGCCGCCGAGGGCGCGTGTGGTCGGAGAT
TTCTTGTTTCAAACTTCCAGTGGCGAATTCATTTGGTTTTTCTTTTCGTTGGGTCGCGTTTGAACTTGCAATGGCATGCC
ACGGCACTGCCAGTGTGGTGGTGACTGCT--ACCTGGTCGGCGGACCTGCTCTGTACAATATGGTGGAAGGGAAGAAGAA
TTCTTGCCAACTTGAGGCAACAATCTCCATCGTCAACAACTCACAGGG--------C--------GCGCGCATCGACCGG
CGGCATGAACCTCACCTTCCGCGCCTCGGGCGCAAGAACGGCCGGGCGGAACGGAGAAGTACAACGAACCTGGACGAAAA
CCTGTACAGATCCATCCTGGGAGACGGCCACGGCGGCGCCGCCACAGAGCTCTCGAGTCGACGAGTCAACCATAGTCGGA
GAGTGATCATAAAAAAAAAACCATAGTCAGAGAAGAAGATCGACAGGGGGCTGCCGGGTTGCCTCCGGCAGCGTGTTGA-
---------------------------------GCAGCCGCCGGCGCGGGTCGGGATTTGATGTGCTCATCGGCGAACTG
TTTTCCTGTTTGGTGCAGTGCGTAAGCAGGACGTGTG-GTGCCATCTGGTGACCGGCGACCTGAATCCATATAATTCCGG
CGCGAGGAGTATATACAGTACTACTCCCTCCGTTCGGAATTACTTGTCTCCGAAATGGATGTATCTAGAACTAAAGTACA
TCTAGATACATCCATTTCTACGACAAGTAATTCCGGACGGAGGGAGTATGATGGAAGAAGAATTCGTGCGAGCGCAGACA
AAATTGTGGTCGTCAGAGAAGGCGCGCACGCACCGACGGCATGAAC----GGGTGAATCTTTTACCTTGTCAACTCTGTG
CAAGAAAATAGAAGACGTCGGGTTGCACAAGGCATGGAGGAGGACGCCGTGCCGTGAACCCGGTTTAGCTCACGGAGAAG
AAGAGAACGTTGGTGTCTCAACCGAGAACAGCAGCCACGCACAACTACTCAACCGTGCAAGTTTACATTTATTTATTGCG
AAAAATCGTGCAAGTAACTTGGAGGGTGTTTGGATCACTAGAGACTAGAGACTAGTAGTAGTCACCTTTAGTCAGTAAAC
CTTCAAACACCCCTGACTAGTGGTCCCTAGTCACCCCACCCCCAACTTTTACTGACTAGAGACTAGTAGTAGTCACCTTT
AGTCAGTCAATAAACCTCCAAACACCCCTGACTTTTACTGACTAAAGTCCCCCTCTCTCTCCTCTAATTGGTGTTGCACA
AGGGACATTTAATACTGAGACATTTAATGCTAACTAGTAGTAGTCACCTTCCAAACATGGCCTGACTAAAAACTTCTAGT
CTGACTACTACTAGTCACATGACTAGAGAGTATCCAAACACCCTCTTGGAGCATGCTTGGATCCAAGAGACTATTTTTAG
TCTGACTAAAACTAGTCTTTTTTAGAGGCTAAAGTTCCAATCACCCCCTGACTACAGAGAGGCTAGAACTAGTCTTGAGA
CTAAATTTTTTTAGTCAGGGGAACCCTACTAAAATGTGGATTAGTCATCTCTCTCTTCATTTAACTCCTCTCCTTTAACA
CATGCGAGTTCTGGATTGAAGGGTTTGGAGGATAATAAATGCTCATAAACTCGATTTTAGTCTATTTAGTATTTATATCC
AAGCATAGGTGAGGCTAACAAGTTTTAGTCCCACTACTTTTAGTCATGGGACTAAAACGTATCCAAGCACCCTCCTCCAT
TGTGAAAAATCGTGCAAGTAACTTGGCTTGCCAAAA-CAGGGCATTTTCCGTTCTTCTC-CGGCACCTAACGGCCGTGGC
TGGTCGCTGGCTTGGAGTAATCAGTGCGCGTACCGATCATCTGTGCCGTGTGCGTGCGTTTCGGCCATATAGGCTGCCTA
CGAGATCTGAT
>chr2D_11
----------TGCATGGACCTCCCGTCTCCTATCCCCCATCGATGCAATTCCGCATTGTCATCACCTCCATCTCGACCAA
TTCTAGCCTCCGACTTCGGTGCTGGCCCACATTCTCGCAGTTTCCT-CCTTACTTGAGAGAGAATCTCAAAGAGATCGCA
TCGTTAAAAATTCGACTGTGATATACA-AAGATCTCATTTCTTTGATTGATGCACGGGCTTCATCCTAAACTCTGACCAT
CGATGCACGAACCTTCCTTCTCCTATTTCCCGAAGATGTGATTCTGCGGTGTCACCACCTCCGCCTCGGACCCTCGGTAC
ATTACAGCCTCCGACGTCGCTCCCCGACCTGTGTCAGCGCCATTCCCACCTTACTCATGGGAGAATCAATCTCAAAGAAA
CCGCGGAGTTAAAAACTC-GACCGTGATCTGCAAAGATCTAAATTCTCATTCATCCACAAA----CATGCACCACTACCT
CACGAGT---GAGAACATTCATCAAACCCAAACACAATCATCTCACTCCCCCTTCAACCCAGCCCTCTTCAAAGCCCTGA
CT------GTACCATCCTCCCCAACCACTAAAACCTGACCGTCCAAAACTCCTCGCCATTCACTCCAAACAGCAACAGCA
ACAGCACACGGAATCCGTCGTTGCACCGTACGTCCAAACCGTACCATGCATGCAACAATAAATCAATAATTCGTTTAAAT
AT--ATA--AAATCTCTGAAAATAATAAGAGAATCGGAACCATAATTAATG---AGCAGCGCGTCGTGTTAGCAA---GA
AACTTCCCGGCTGCTGCCACAGCGGCAGCAGTTAA-CACCACAACACGCGGGTCCCACCGGTCATACTGGCCGTGGGCTC
ACGAAT-CTCCCCCGCAGCCCCGCATAAATAGCTCCCCCG-TGGCGCCCCAGATCGTCTTCAACCCAGAAACCAGAGACA
G--------------AATCCCAAGCCCCGAGAGAACTCTCCGGCCAGAACACGGGAGCG--------AGCGATCTCCAAT
CTCTTTTGCGGCCGCCGATACAGCCGGAGAAAATTACTACCCCACAGTCACGACCGCGCAGGGCGACGGCGGCCACACAG
CATACCCCGCCGCCACGATGCCGTCCGCCTCCAGCGCCGTCCCATCCGCCGCGGCGCCGGGCGACGAGTCCCAACCCCTC
GCCGCCCCGAAGCTCCTGCTGGGGAGGTACGAGCTGGGCGGGCTCCTCGGCCGCGGCGCGTCCGCCAAGGTGTACCGGGC
CAGGGACATCCTCACGGGCCGGGACGTGGCCATCAAGTCGTTCCCCAACCCGCGGGCCGGCGCGCGCGAGGGGGAGGGCT
CCGCCGGGTCCGCCGCCATCGAGCGGGAGGCGGCCATCCTCAGCCGCCTGCGCCACCGCCACGTCGTGAGGCTCCACGAG
ATTCTCGGCACGCGCAAGAAGGTCCACTTTGTCCTCGACCTCGCCGCCGGCGGCGAGCTGTTCTCGCTCGTCGACTCCGA
CGGCCGCATGACGGAGGACCTCGCGCGGCATTACTTCCGCCAGCTCGTGTCGGCCGTCCGGTACTTCCACTCCCGCGGCG
TCTACCACCGCGACATCAAGCCGGAGAATTTGCTCCTCGACGGCGACGGCGACCTCAAGGTCGCCGACTTCGGCCTCGGC
GCCATCACGGACGAGAGCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTCGCGCCGGAGATCCTCTCGAAGCAGGG
GTACCACCCGGCCAAGGTCGACATCTGGTCCTGCGGCGTGGTGCTCTTCGTGCTCGCCGCCGGCTACCTCCCCTTCAACG
ACGCCAGCCTCATCAACATGTACCGCAAGATCTACGCCGGCCGGTTCCGGTGCCCGAACTGGTTCTCGCCGGCGCTCCGC
CACCTGCTGCGCCGCATCCTCGACCCCAACCCGTCGACGCGCATCGACACGGACGGCATCATGGAGCACCCCTGGTTCCG
CCACGGCGCGAGCGG---TGACGGCGAGCTGGAGGAGCTGATGCGCGGGCACGAGGAGGAGGCGTGGTTCAAGACGGAGT
TCAAGGAGGACATGGCGCGGGACATGACCGCGTTCGACATCCTGGCCTTCTCGCCCGGCTCGGACCTCTCCGGGCTGTTC
GGCGCCGGGCCGGGCACGGAGCGGGTGTTCGTGGGCGAGCCCGCCGCGGCCGTGCTGGCCCGGGTCGAGGACGCCGGGAA
GAAGCAGGGGCACCGCGTGAGGAGGGAAGGGAAGGGCCGCGCCGGGCCGGTGTACGTGGAGGCGGAGGCCGGCGGCATTG
TCGCCAAGGTGACCGTGTTCCGGATCGCCGACGCGGTGTCGGTGGTGGAGGTCGTCAAGGGCCACGGCGCGGAGGCCGCG
GCGTTCTGGAGCGACTGGCTCGAGCCGGCCGTGAAGCCTCAGGCAGTGTGA-AAAAGCTGCCGAGTGTGAGCCGGGCCAA
GAATGTTATGTCGCTTCGCCGTGCCGTGCCGTCCCGGTGCCGGCATGCCGCCGCCGCGGGCGGGCG-------CGGAGAT
TTCTTGTTTCAAACTTCCAATGGCGAATTCGTTTGGTTTTTCTTTTCTTTGGGTCGTGTTAAAGC-------GGCATGCC
ACGCCACCGCAAGTGTGGTGGTGACTGCGAA--CTGGTCGGCGGACCTGCTCTGTACGATATGGTGGGAGGGA---AGAA
ATCTTGGCAACTCGAGGCAACAATCGCTATCGTCAACAACTCACAGGGCGTGCGCAC--------GAGCGCATCTACCGG
CGGCATGAACCTCGCCTCCCGCG-----------AGAACGGCCGGGCGGGACGGAGAAGTACAATGAACCTGGACCGAAC
ACTTGCACAGAA--------------------------------------------------------------------
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>chr2D_1780
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-----GCTGCGCTGCATCCTCGACCCCAACACGGCCACGTGCATTGACACGGAGGGCATCATGGAGCACCCCTGGTTCTG
CCACGGTGCGAGCGA---CGGAGGCGAGCAGGAGCAACTGATGCGCGACCACAAGGAGGCGGCGTGGTTCAACGCGGAGT
TTGAGGAGGACATGGCCCGGGCCATGACCGCGTTCGACATCTTGGCCTTCTCGCCCGGCTCGGACCTCTCTGGGATGTTC
GGCGCTGGGCCGGGCACGGAGCGGGTGTTCGTGGGCGAGCCCGCCACTGTCGTGCTAGCCCAGGTCGAGGAAGCCGGGAG
GAAGCGAGGGCACCGCGTGAGGAGGGAAGGGTACCA---CGCCGGGCCGGTGTACGTGGAGGCGATGGCCGGCGGCATTG
TTGCCAAGGTGACTGTGTTTAGGATCGCTGATGCGGTGTCAGTGGTCGAGGTCGTGAAGGGCCACGGTGCGGAGGCTGCG
GCGTTCTGGAAGGACTGGCTCGAGCCGGTCGTGAAGCCTCGGACAGTGTGA-AAAAGCTACCGAGTGCGAGCCGGGT---
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>chr2B_1780
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-----GCTGCGTTGCATCCTGGACACCAAGACGGCCACACGCATTAACACGGAGGGCATCATGGAGCACCCCTGGTTCTT
CCACGGTGTGAGCGA---CGGAGGCGAGCAGGAGCAACTGATGCGCGGCCACAAGGAGGCGGCGTGGTTCAATACGGAGT
TCGAGGAGGACATGGCACGGGCCATGACCGCGTTCGACATCATGGCATTCTCGCCCGGGTCGGACCTCTCTGGGATGTTC
GGCGCCGGGCCGGGCACGGAGCGGGTGTTCGTGGGCGAGCCCGCCACTATCATGCTGGCCCGGGTCGAGGAAGTCGGGAA
GAAGCGAGGGCACCGCGTGAGGAGGGAAGGCTACCA---CGCCGGGCCGGTGTACGTGGAGGCGGTGGCCGGCGGCATTG
TTGCCAAGGTGACTGTGTTTAGGATCGTTGATGCAATGTCAGTGGTCGAGGTCGTGAAGGGCCACGACACGGAGGCTGCG
GCGTTCTGGAAGGACTGGCTCGAGCCGGTCGTGAAGCCTCGGATAGTGTGA-AAAC-CTACTGAGTGCAAGCCGGGT---
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>chr2A_1788
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-------------GCAGCCTCGACCCCAATCCGGCCACGCGTATTGAAACGGACGAGATCATGGAGCACCCCTGGTTCTG
CCATGACGCGAACGACGGCGGAGGCGAGCAGGAGCAACTGATGCGCGGCCACAAGGAGGCGGCGTGGTTCAATACGGAGT
TCGAGGAGGAGATGGCGCGGGATATGACCGCGTTCGACATCCTGGCCTTCTCACCAGGCTCGGACCTCTCCGGGTTGTCC
GGTGTCAGGCCGGGCACGGAGCGGGTGTTCGTCGGCGAGCCCGCGGCGGTCGTGCTGGCCCGGGTTGAGGATGCTGGGAA
GAAGCGAGGGCACCGTGTAAGGAGGGAGGGGAAGAACCGCACTATACCGGTGTTCGTGGAGGCGGTGGCCGGCGGCATTG
TCGCCAAGGTGACTGTGTTTAGGATCGCCGAAGCGTTATCAGTGGTCGAGGTCGTGAAGGGCCATGATGCGGAGGCCACG
ACGTTCTGGAAGGATTGGCTAGAGCCAGCCATGAAGCCTCGAACAGTGTGA-AAAACTTACAGAGTGCGAGCCG------
-AATATCATATCGTCTCGCCGTGC--------------------------------------------------------
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>SNPs
-----S---S-----------S--S----SS----S---------S-----------------S----SS-S------S-
-S---------------SS---S-------------S----------------S-----S-S------------------
---S----------S-S-----SS--------------------S---------S--S---------------S------
-------S---------------S----S---------S-----S-S-S------S-----------S------------
---------------------S-------SS---------S---------S----S---------------S----S---
----S---------S---S----------S---S-S------SS-------S---------SSSS---------------
-------SSS-----S--S------S----------------S---------S-----SS-S---------------S--
-SSSSSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SSSSS---S--------------S--------------S-----S--SSS-----------------------S--
------------------------------S-------------------------------------------------
----------------------------------------------------------------------------SS--
--------------------------------S------------S-------------------------------S--
--------SS-------------------------------S--------------------------------------
--------------------------------------------S---------------------------------S-
-----------------S--------------------------------------S-----------------------
------------------------------------------------------S-------S-----------------
-S------S-----------------------------------------------------------------------
-----------S---------------------------------S-------------S--------------------
----S-----------------------S-------------------------------S-------------------
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-----------------------------------------------------------------S--------------
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--------------------------------------------------------S-------------------S---
------------------------------------------------------------S-------------------
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-------------------S------------------------------------------------------------
-S------------------------------------------------------------------------------
---S-----SS--S------------------------------------------------------------------
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------------------------------------------------------------------------------S-
-------------------------------------S------------------------------------------
--S-----------------------------------------------------------------------------
-----------------S----------S---------------------------S-----S-----------------
----------------------------S--S-------------------------SSSSSSSS--S-----------S
--------------------------------------------------S-------------------S---------
------------SSS-SSS-SSSS---------S----S-----SS--S------SS-------------S----S-SS-
--------------------------SSS----SS-----SS---------------SSSS-SS-S-SSS-SS-SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-S--S------------S-----SSSSSS---------------
-------S---------------S-------S---S-S--------S----S--------S--S--------------S-
---S-----S-SSS------------------------------------------------------------------
----------------------------------------------S------------S-S-SS---------------
--S----S------S---------------S--SS-SS-SSS-S--SSSS--S-------------S-------S---S-
--------SSS-------SS--S-S-S---SSSSS-SS-SSSSSSSS---------------------------------
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----------------S-SSS------S--------S---S---------S-SSSSSS-S-------------S------
------S----S-----------------------------S--------------------------------------
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>forward_567
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-------------------------------------------------------------------TTCAAAGCCCAGA
CCTGACC-------------------------------------------------------------------------
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>reverse_2658
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CTGGTGACTGCAAAACCTGG-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
