>input_sequence_55015
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-------------------------------------------------------------------AT------GGGAA
GTGTTCCAGCAGCCACCCCCAGCGTGCGCGAGATCTGGCGCGCGCAGCGCGCCGACGGGCCGGCGGCCGTGCTCGCCATC
GGCACGGCGAACCCGGCGCACTGCGTGCCCCAGGACGAGTTCCCGGACTTCTACTTCCGCGCCACCAACAGCGACCACCT
CACTGCCCTCAAGGGCAAGTTCAAGAGAGTCTGTAA---------GCATGC----------------CCCAGCTTTCTTG
ATCATCTTCCATTTAGGACGT----GTTTGATTGGACCATTAAC----TA------ACTGTTTGTTTGGTTGGCATGCGT
CGAGCGCAGTTCAGAAGCTAGGCGTTGAGAAGCGCTACCTCCACCACACGGAGGAGCTGCTGCGCGCCCACCCCGAGTTC
CTCGACGACGAGGCGGCGTCCCTGGACGCCCGGCTGGACATCGTCGCCACCGCCGTCCCGGAGCTGGCCGCGGAGGCCTC
TAAGAAGGCCATCTCCGAGTGGGGCCGGCCGGCCGCCGACATCACCCACCTCGTGGTCACCACAAACTCCGGCGCCCACA
TCCCGGGCGTCGACTTCCGCCTCATCCCGCTTCTCGGCCTCCGCCCCTCCGTGCGTCGCACCATGCTCTACCTCAACGGC
TGCTTCGCCGGCTCCGCCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCGCGCGTCCTCGTGGTCTG
CGCCGAGCTCACCCTCATGCTGTTCAACGGGCC---CAAGGAGGGCTCCTTCGAGAGGCTCATCCACCAGGGGCTCTTCG
GCGACGGCGCGGGCGCCGTCGTCGTCGGCGCCGACCCGCTG---AGCCCCGTCGAGCACGCCCTGTTCGAGATGGTGTCC
GCCGCGCAGACGGTGATACCGGACTCCGGCGACGCCATCACCATGCACATCACCAAGGGCGGGTTCGGCGGCAACATCTC
CACGAG---GGACGTCCCGGTGTTCATTGGGGACAACGTCGAGCGGTGCCTCCACGACTCGCTGGAGCCGC------TCG
GCATCGGCGCG------AAATGGAACGACCTCTTCTGGGCGGTGCACCCCGGGTCGTCTGCCATTCTGGACCGCATCGAC
ACGGTGCTCCAGCTCGAGCCGGAGAAGCTGGCGGCGAGCCGCCGGGTGCTGAGCGACTACGGCAACATGTTCGGCGTGAC
AATTATATTTGTTCTCGACGAGCTGCGCCGGAGGCTTAGGGAGCAGGAAGGGGCCGGCGGCGCGCCGGAGTGGGGTGTGG
TGATGACCTTCGGGCCGGGGCTCACCGTGGAGACGATGGTGTTGCACGCCACTGGGCACATGCATGCGTCCCCATGA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr6D_1_TraesCS6D01G278200
AAGGAAAACTTAAGGTGGTTATTTTAATACATATCTGGGTGGATTGGTTGAGGCACCCAGGGGATACCAGTGGATTGCCC
GGACACCTGAGGAATCCAGTGTTGTCCAAAGAGATCCCGAACGGCACGAACAGCACGAATGGCACGTTACCGAACGGCAC
GTTACCAACTCACCGTCAAACCCTCTCCCGACGTCGGCACCAACGTCCTCCACAACGCCGTCTCATTCCCGACGCATTAA
CTGTCCCCAACTGCCACCTGCAATACGTCCGTAGTCTCGCATCTCCGCCTGATGGACGAGCGACGATAGCGAGAGCGCGC
GAGCTCGTCCGCGCCTGGTGATTTTCGAGGCTGCTTCCTTCTTTTCTGTCGGGTGCCCTCATCTCCGGTGTCTAGTTCAT
CACAGTAAGCGCAGTTTCATTTTCTTAGATATCACATTTAACTCGGAG--------GCATCATTCATGAGCCAGAAGTCA
GCGGAAAGTATGAGTTTAACAATTGATTTCCTGTTGCCCTCCTAATAAAA-TACTACTAGCATCCATCCATAGCCGCCGG
GCATATCATACTCACTAACCGAAGAACGCCATTAACTACTTCCGGACGACCAGGCCCAGTCTCA------TGGTCACAGA
GGAAAGTCAATGCCAAGAATGGCAATGGAGCCGTGTCAAACGTCGATTGCTGGAACATGACGGAAGTCCCACAATACGCT
TCCGCTCCTGCAAAACACCAATTTCCGGTGTGCTGGCGGGCGCCGCAAAAGTATACTGTGGACCTCTTCAATCATCGTCA
TCTCCCCGGGCGCCTCTCATTGCAAAGCAGTCTTGACGATCTACAGAGCATACAATTCCA--------CAACCAAATGCG
GTACGCA----TACTATATATATACAGGTAGAACTCCATCGTGGAAACATACTAGGCAAGAAAGGGAAAGAGAAATAGAC
AGCGGAAAGTTGCCTCCATAGTGGAAACAGGCTAGGCGTGAGAGAGTTCAGTTTTGGCAACCACAGCAT------GGGAA
GTGTTCCAGCAGCCACCCCCAGCGTGCGCGAGATCTGGCGCGCGCAGCGCGCCGACGGGCCGGCGGCCGTGCTCGCCATC
GGCACGGCGAACCCGGCGCACTGCGTGCCCCAGGACGAGTTCCCGGACTTCTACTTCCGCGCCACCAACAGCGACCACCT
CACTGCCCTCAAGGGCAAGTTCAAGAGAGTCTGTAA---------GCATGC----------------CCCAGCTTTCTTG
ATCATCTTCCATTTAGGACGT----GTTTGATTGGACCATTAAC----TA------ACTGTTTGTTTGGTTGGCATGCGT
CGAGCGCAGTTCAGAAGCTAGGCGTTGAGAAGCGCTACCTCCACCACACGGAGGAGCTGCTGCGCGCCCACCCCGAGTTC
CTCGACGACGAGGCGGCGTCCCTGGACGCCCGGCTGGACATCGTCGCCACCGCCGTCCCGGAGCTGGCCGCGGAGGCCTC
TAAGAAGGCCATCTCCGAGTGGGGCCGGCCGGCCGCCGACATCACCCACCTCGTGGTCACCACAAACTCCGGCGCCCACA
TCCCGGGCGTCGACTTCCGCCTCATCCCGCTTCTCGGCCTCCGCCCCTCCGTGCGTCGCACCATGCTCTACCTCAACGGC
TGCTTCGCCGGCTCCGCCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCGCGCGTCCTCGTGGTCTG
CGCCGAGCTCACCCTCATGCTGTTCAACGGGCC---CAAGGAGGGCTCCTTCGAGAGGCTCATCCACCAGGGGCTCTTCG
GCGACGGCGCGGGCGCCGTCGTCGTCGGCGCCGACCCGCTG---AGCCCCGTCGAGCACGCCCTGTTCGAGATGGTGTCC
GCCGCGCAGACGGTGATACCGGACTCCGGCGACGCCATCACCATGCACATCACCAAGGGCGGGTTCGGCGGCAACATCTC
CACGAG---GGACGTCCCGGTGTTCATTGGGGACAACGTCGAGCGGTGCCTCCACGACTCGCTGGAGCCGC------TCG
GCATCGGCGCG------AAATGGAACGACCTCTTCTGGGCGGTGCACCCCGGGTCGTCTGCCATTCTGGACCGCATCGAC
ACGGTGCTCCAGCTCGAGCCGGAGAAGCTGGCGGCGAGCCGCCGGGTGCTGAGCGACTACGGCAACATGTTCGGCGTGAC
AATTATATTTGTTCTCGACGAGCTGCGCCGGAGGCTTAGGGAGCAGGAAGGGGCCGGCGGCGCGCCGGAGTGGGGTGTGG
TGATGACCTTCGGGCCGGGGCTCACCGTGGAGACGATGGTGTTGCACGCCACTGGGCACATGCATGCGTCCCCATGAAGA
GGAATTGACACTGGATTAAGAGGTCAATTCGTTGT----------ATCAGTTTGCACTTATTTGGCACTGTTTGAAGTCG
TTTACCAAAACCATCCTTACTTGAATGTGTGCG---TAATAAAGTCAAAGTTCAATAGTTTCAGGATCTATTCAGTCTGG
ACTCTTTTTGGAAAAAATCACCATGTGTTGATTAAGAAACCATGATACTATCATTCGTGACAAAATTCTTCATGACGGAA
CATCCCCAACAAGCACTCTTTCTCTACTGCTTAAAAAATACTCCCTCCATTTTCAAATATAAGTCTTTCTAGAGATTCTA
ACAAGTGACTACATACGAAGCAAAATGAATGAATCTACACTCTAAAATATATCTACATGCATACGTATGTTGTAGTCCAT
TTAAAATGTCTAAAAAGACTTATATTTAGAAACGGAGGGAGTAATTAACCAACTCGGTTCCCACGATTATAGGATCG-AC
GAGGCGATCAAGGAGGCGACGAGGGTTCCCTTGCGCGTCGCCGGTGACGCCGCCGGTTCCCTCTCTCTCCGTCGGCCGCT
CCGGCGGCGGGAGGGAGGGGGAACCTCGGGTCTGTTCGCTAGGTGGGTGTGTGGTAGGGTTAGGATTGAGGGAGACGTTG
CCGAGTCCGTTGCGGTGGTGTCGCGTCGGAATAAGTTTCTCCGGGCTCCGTTCGCGGTCAGGCGAGGCTTTTGCCTGCGT
CCAGGAGCCAGCGGGGTTGGGGATCCCCGTATCTCGTCGAGGTCGCGGGCTATGATGCCTGGAGGTCCATCGGCACTGGC
CGTTTGGGTCCTCAGATGGGCGATGGATACAGCGAGACGAAGACCTTTCTTCTTCCTTGTTGGTATGATTTGCTGCTGCT
GTTCTTCTCCTTCCTCTGTGCTGATGCTGGTGGGAGATCCTGCTTTGCCCAGGCGGATGGCCCGGCCGCGGTGCTGGACC
GGTCGGATTGTTGGGGATCGTAGCAGAAATTTAAAATTTTCTACGCATCAC
>chr6A_411
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GCAGTTTCATTGTCTTAGAGGTCACATTTGACTCGGAGTCTCGGAGGCATCATACATGAGCCACAAGTCA
GCGGAAGGTATGAGTTAATCAATTGATTTCCTGTTGCCCTCCTAATAATACTACTAGTAGCATGCATCCATAGCCGCCGG
GCATATCATACTCACTAACCGAAGAACGCCATTAACTACTTCCAGAGGACCAGGCCCAGTCCCA------TG------GA
GGAAAGTCAATGCCAAGAATGGCAATGGAGCCGTGTCAAACGTCGATTGCCGGACCATGACGGAAGTCCCACAGTACGCT
TCCGCTCTTGCAAAACGCCAATTTCCGGTGCGCTGGCGGGCGCCGCAAAGGTATAC--TGGACCTCTTCAATCATCGTTA
TCTCCCCG------------TGCAAAGCAGTCTTGACGGGCTACGGAGC--ACAATGCTA--------CAACCAAATGCG
GTACGTAGCAGTACTATATATATACAGGCAGAACTCCATCGTGGAAACATACTAGGCAAGAAAGGGAAAGAGAAATAGAC
AGCGGAAAGTTGCCTCCGTCGTGGAAACCGGCTAGGGGTGAGAGAGTTCAGTTTTGGCAAC--CAGCATCAGCATGGGAA
GTGTTCCGGCAGCCACCCCCAGCGTGCGCGAGATCTGTCGCGCGCAGCGCGCCGACGGGCCGGCGGCCGTGCTCGCCATC
GGCACGGCCAACCCGGCGCACTGCGTGCCCCAGGACGAGTTCCCCGACTTCTACTTCCGCGCCACCAACAGCGACCACCT
CACCGCCCTCAAGGGCAAGTTCAAGAGAGTCTGTAA---------GCGCGCATGCTGCAAGCTCCAGCCCAGCTTTCTTG
GTCATCTTCCATCTAGGACGTACGTGTTTGATCGGTCCATTAGC----TA------ACTGTTTGTTTGGTTGGCATGTGT
CGAGCACAGTTCAGAAGCTAGGCGTTGAGAGACGCTACCTCCACCACACGGAGGAGCTGCTCCGCGCCCACCCGGAGTTC
CTCGACGACGAGGCGGCGTCCCTGGACGCCCGGCTGGACATCGTCGCCACCGCCGTCCCGGAGCTGGCCGCGGAGGCCTC
TAAGAAGGCCATCGCCGAGTGGGGCCGGCCGGCCGCCGACATCACCCACCTCGTTGTCACCACGAACTCCGGCGCCCACA
TCCCGGGCGTCGACTTCCGCCTCATCGCGCTCCTCGGGCTCCGCCCCTCCGTGCGCCGCACCATGCTCTACCTCAACGGC
TGCTTCGCCGGCTCCGCCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCGCGCGTCCTCGTGGTCTG
CGCCGAGCTCACCCTCATGCTGTTCAACGGGCC---CAAGGAGGGCTCCTTCGAGAGGCTCATCCACCAGGGGCTCTTCG
GCGACGGCGCGGGCGCCGTCGTCGTCGGCGCCGACCCGCTG---AGCCCCGTCGAGCACGCCCTGTTCGAGATGGTGTCC
GCCGCGCAGACGGTTATCCCGGACTCCGGCGACGCCATCACCATGCACATCACCAAGGGCGGGTTCGGCGGCAACATCTC
CACGAG---GGAGGTCCCGGTGTTCATCGGCGACAACGTCGAGCGGTGCCTCCACGACTCGCTGGAGCCGC------TCG
GCGTCGGCGCG------AAATGGAACGACCTCTTCTGGGCGGTGCACCCCGGGTCGTCTGCCATACTGGACCGCATTGAC
ACCGTGCTCCAGCTCGAGCCGGAGAAGCTGGCGGCGAGCCGCCGGGTGCTAAGCGACTACGGCAACATGTTCGGCGTGAC
GATTATATTTGTCCTCGACGAGCTGCGCCGGAGGCTTAGGGAGCAGGAAGGGGTCGGCGGCGCGCCGGAGTGGGGTGTGG
TGATGACCTTCGGGCCGGGGCTCACCGTGGAGACGATGGTGTTGCACGCCACAGGGCACATGCATGCGTCCCCATGAAGA
GGAATTGTCACTGGATTAACATGTCAATTCGTTGT----------ATCAG-TTGCACTTATTTGGCATTGTTTGAAGTCG
TTTACCAAAACCATCCTTACTTGAATGTGTGCGTAATAATAAAGTCAAAGTTCAATAGTTTCAGGATCTGTACAGTTTGG
ACTCTTTTTGGAAAAAATCACCATACGTTGATTAAGAAACGATGATACTATCATCCGTGACAAAATTCTTCATGACGGAA
CAGCCCCAACAAGCACTCT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr6B_489
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TAATCAATTGATTTCCTGTTGCCCTCCTAATAATAAAATA--------GCATCCATAGCAGCCGG
G-----CATACTCACTAACCGAAGAACGCCATTAACTAGTTGCAGACGACCAGGCCCAGTCTCAAGGTCGTG------GA
GGAAAGTCAAGGCCAAGAATGGCATTGGAGCCGTGTCAAACGTCGATTGCTGGAACGTGACGGAAGTCCCACAATACGTT
TCCGCTCTTGCAAAACACCAAATTCCGGTGTGCTGGCGGGCGCCGCAAAGGTATAC--TGGACCTCTTCAATCATCGTTA
TCT-----------------TGCAAAGCAGTCTTGACGGGCTACGGAGT--ACAACGCTACAAGTCTGCAACCAAATGCG
GTACGTA------CTATATATATACAGGTAGAACTCCATCGTGGAAACATACTAGGCAAGAAAGAGAAAGAGGAATAGAC
AGCTGAAAGTTGCCTCCATCGTGGAAACAGGCCAGGCGAGAGAGAGTTCAGTTTTGGCAAC--CAGCAT------GGGAA
GTGTTCCGGCAGCCACCCCGAGCGTGCGCGAGATCTGGCGCGCGCAGCGCGCAGACGGGCCGGCGGCCGTGCTCGCCATC
GGCACGGCGAACCCGGCGCACTGCGTGCCCCAGGACGAGTTCCCGGACTTCTACTTCCGCGCCACCAACAGCGACCACCT
CACCGCCCTCAAGGGCAAGTTCAAGAGAGTCTGTAA---------GCATGCA---TGCACGCTCCAGCCCAGCTTTCTTG
ATCATCTTCCATTT----CGGACGTGTTTGATCGGCCCATTAAC----TA------ACTGTTTATTGGATTGGCATGTGT
CGAGCACAGTTCAGAAGCTAGGCGTTGAGAAACGCTACCTCCACCACACGGAGGAGCTGCTCCGCGCCCACCCCGAGTTC
CTCGACGACCAGGCGGCGTCCCTGGACGCCCGGCTTGACATCGTCGCCACCGCCGTCCCGGAGCTGGCCGCGGAGGCCTC
TAAGAAGGCCATCGCCGAGTGGGGCCGGCCGGCCGCCGACATCACCCACCTCGTAGTCACCACAAACTCCGGCGCCCACA
TCCCGGGCGTCGACTTCCGCCTCATCGCGCTCCTCGGGCTCCGCCCCAACGTGCGCCGCACCATGCTCTACCTCAACGGC
TGCTTCGCCGGCTCCGCCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCGCGCGTCCTCGTGGTCTG
CGCGGAGCTCACCCTCATGCTGTTCAACGGGCC---CAAGGAGGGCTCCTTCGAGAGGCTCATCCACCAGGGGCTCTTCG
GCGACGGCGCGGGCGCTGTCGTCGTCGGCGCAGACCCGCTG---AGCCCCGTCGAGCACGCTCTGTTCGAGATGGTGTCC
GCCGCGCAGACGGTGATCCCGGACTCCGGCGACGCCATCACCATGCACATCACCAAGGGCGGGTTCGGCGGCAACATCTC
CACGAG---GGAGGTCCCGGTGTTCATCGGGGACAACGTCGAGCGGTGCCTCCACGGCTCGCTGGAGCCGC------TCG
GCGTCGGCGCG------AAATGGAACGACCTCTTCTGGGCGGTGCACCCCGGGTCGTCTGCCATACTGGACCGCATTGAC
ACGGTGCTCCAGCTCGAGCCGGAGAAGCTGGCGGCGAGCCGCCGAGTGCTGAGCGACTACGGCAACATGTTCGGCGTGAC
GATTATATTTGTCCTAGACGAGCTGCGGCGGAGGCTTAGGGAGCAGGAAGGGGTCGGCGGCGCGCCGGAGTGGGGTGTGG
TGATGACCTTCGGGCCGGGGCTCACCGTGGAGACGATGGTGTTGCACGCCACAGAGCACATGCATGCGTCCCCATGAAGA
GGAATTGTCACCGGATTAAGAGGTCAATTCGAAGTAGTATCAGTAATCAG-TTGCACTTATTGTCGTT------------
-----------CATCCTTACTTGAATGCGTGCGTAG---TAAAGTCAAAGCTCAATAGTTTCAGGATTTATT--------
--------------------------------------------------------------------------------
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---------------------------------------------------
>chr5D_1074
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------CCGTGCTCGCCATC
GGCACGGCGAACCCGGCGAGCCGCATGCTCCAGGACGACTACGCCGACTACTACTTCCGCGTCACCAACAGCGAGCACCA
TGCCGAGCTCAAGGACAACCTCAAGAGAATCTGTAATCTTCTCGTGCATGCA---TGATGCATGCAGGGCGCGCG--TTT
ATCTGCTCCCATTTTCGCACGGCTAGCTACAAGGTGCTAGACCGTCAGTA------ACTGTTTCGTTTCTCTCCTGTTCG
AT----CAGGTAAGAAATCTGGCATTGAGAGGCGCTACGTGCACCTCGACGAGGAGCTCCTCGGCGCGCACCCGGAATTC
ACCGACCGCGCGCTGCCGACCCTCGACGCGCGGATAGACATGGCCTCGGCCGCGGTGCCCGAGCTCGCCGCGTCCGCCGC
GTCCAGGGCCATCGCCGAGTGGGGGCGCCCGGCCGCCGACGTCACGCACCTCGTCTTCAGCACCTACTCCGGCGGGAAGG
CCCCCAGCGCCGACCTCCGCCTGGCGTCGCTGCTTGGCCTCCGCCCCACCGTGTCCCGCACCAACCTCAGCCTCAACGGC
TGCTCCGGCGGCGGCAGGGCGCTGCAGCTCGCCAAGGAGCTCGCCGAGAACAACCGCGGCGCGCGCGTCCTCGTGGCCTG
CTCCGAGCTCACCCTCGTCCCGTTCTACGGCCC---CCAGGAGGGCCGTCTCGACACCATCCTCGGCCACGGCATATTCG
GCGACGGCGCGGGCGCCGTCATCGTCGGCGCCGACCCCGTCAACT---GCATCGAGCACCCGCTGTTCGAGATGGCCTTC
GCTACGCAGGCGACGATACCGGATACCCAGGACGAGATCACCATGCAGCTCATGAAGGGCGGCCTCGACTTCCACGTCTC
CGTC------CGGGTGCCGAAGCTGCTGAAGAGCAACGTCGAGCGCTGTCTGATCGACGCGTTCGAGTCCA------TTG
GGATCAGTGCTAC------GTGGAACGATCTCTTCGGGGCTATCCACCCTGGTGGCCGTGCGATTTTGGACCACGTTGAG
CAACTGCTCGGGCTGGGCGTCGATAAGCTGGCGGCGAGCCGACGGGTGCTGAGAGAGTACGGGAACATGAGCGGGCCAAC
GGTGATCTTCGTGCTCGATGAGCTGCGCCGGCG---TAGGGCAAGGGGAGAGGAGGTGGCC------GAGTGGGGTGTGA
TGATGGCGTTCGGTCCGGGGATCACGATCGAGACCATGGTGCTGCACGCC------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>chr4B_1257
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------ATTAAC----TACCTAGTACTGTTTGTTG--------TGCAT
CGCATGCAGATGGGAAACTTAGCGTCCAGAAGCGCTACTTCCACCACACTGAGGAGGTGCTGAGTGCCCACCTCGAAATC
ATCGATCCCTCGTCGCCGTCCCTAGATACCAGACTGGAGATCGTCAGGGATGCCGTCCCAGAGCTTGCTGCAAAAGCCTC
CGTCAACGCCATCACCGAGTGGGGCCGTCCAGCAACCGACATCACCCACCTCGTCGTCACCACCAACTCCGGCGCCCATG
TACCAGGCGTTGACTTCCGCCTCATGGGGCTCCTCGGCCTGAGGCCGTCGGTCCGTCGCAGCATGCTCTACCTCAACGGC
TGCTTCGCCGGCTCTGCAGCGTTGCGCCTCGCCAAGGACCTCGCCGAGAACAACCGTGGCGCCCGCGTCCTTGTGGTCTG
CGCTGAGCTCACCATCATGCTGCTCAGAGGCCC---CAAAGAGGACTGCTACCAGACAATCGTCGACCACGGGCATTTCG
GCGACGGTGCGGGCGCCGTCATCGTCGGCGCCGACCCCACGACTAGCCCCGCCGAGCGCCCGTTGTTTCATATGGTAGCC
GCCACACAGACGGTGATACCAGAGTCGGATCATGCCATCAACCTGCGCCTGACGGAAGACGGACTCCGGGGCTACCTCGC
CCCGGGAAAGGAGGTGCCGGTGCTCATCGGGGACAACATCCAGCAGTGCCTCCTGGACTCGTTTGAACCGC------TGG
GCGTCCAG------GTCAAGTGGAACGACCTCTTCTGGGCGATGCACCCCGGGTCGGTCCCGATCTTGGACCGGATCGAT
GAGGCGCTCCAGCTTGAGCCGGAGAAGCTGGCGCCAAGCCGCATGGTGCTGAGAGAGTACGGCAACATGTTTGGCGTGTC
CGTCATCTTCGTGCTCGATGAGCTACGCCGGCG---TAGGGAGATGCAAGGGGCAGAGGCAACACCTGGCTGGGGTGTGA
TGATGGCATGTGGGCCCGGGCTGACTATCGAGACCATGATACTGCACGC-------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>chr6A_1316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGAAGCGCTACTTCCACCACACGGAGGAGTTGCTGCAGCATCACCCGGAGTTC
ATCGACCGCACGTTGCCATCCCTAGATGCCCGGATGGACATCGCGGCCACCGCCGTTCCGGACCTCGCGGCAGCGGCAGC
GGGCAAGGCCATCGCGGAGTGGGGCCGCCCAGCCGCCGACATCACCCACCTCGTCGTCAGCACCTACTCCGGCGCCCACA
TGCCGGGCGTCGACCTCCGCCTGGCCTCCCTCCTCGGCCTCGACCCGTCCGTCCGCCGCACCATGCTCTACCTCAACGGC
TGCTCCAGCGGGTCCGCCGCGCTCCGCGTCGCCAAGGACATCGCCGAGAACAACCGCGGTGCCCGCGTCCTCGTCGCCTG
CGCCGAGCTCACCCTCATCTTGTTCCGCGCGCCCGACGAGGCCCA---CGTCGACACGATCATCATGCAGGCTCTCTTCG
GCGACGGCGCGGCCGCCGTGATAGTCGGAGCCGAACCCGACGCCT---CCGCCGAGCGCCCGATTTTCGAGATGGTGGCC
GCCTCGCAGAGCGTGATACC------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr6B_1316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGAAGCGCTACTTCCACCACACGGAGGAGTTGCTGCAGCATCACCCGGAGTTC
ATCGACCGCACGTTGACATCCCTGGATGCCCGGATGGACATCGCGGCCACCCCCGTTCCGGACCTCGCGGCAGCGGCCGC
GGGCAAGGCCATCGCGGAGTGGGGCCGCCCAGCCGCCGACATCACCCACCTCGTCGTCAGCACCTACTCCGGCGCCCACA
TGCCAGGCGTCGACCTCCGCCTGGCCTCCCGCCTCGGCCTCGACCCGTCCGTCCGCCGCACCATGCTCTACCTCAACGGC
TGCTCCAGCGGGTCCGCCGCGCTCCGCGTCGCCAAGGACATTGCCGAGAACAACCGCGGTGCCCGCGTCCTCGTCGCCTG
CGCCGAGCTCACCCTCATCTTGTTCCGCGCGCCGGACGAGGCCCA---CGTCGACACGATCATCATGCAGGCTCTCTACG
GCGACGGCGCGGCCGCCGTGATAGTCGGAGCCGAACCCGACGCCT---CCGCGGAGCGCCCGATTTTCGAGATGGTGGCC
GCCTCGCAGAGCGTGATACCTGAGAGTACGCACGGCGCGGTCGGGCGACTTCGGGAAGACGGGCTCGTCTTCAACCCTTC
CTTC------GAGATGCCGGCGCTGATCCGGGAAAACATCGAGCAGTGCATGGCCGACGCAGTCGGGCCGC------TTG
GGTTGAGCGGTGG------CTGGAACGACCTTTTCTGGGCGGTGCATCCCGGCGGGCGGGCAATCTTGGACAGCGTGGAG
G-CGGGATCCAGTTGGAGCCAAAGAAGCTGACGGCAAGCCGGCATGTACTCAGTGAGTACGGAAACATGTCCGGGCCGAC
AGTGATCTTCGTCCTCGACGAGATCCGCCG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr6D_1318
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AAGCGCTACTTCCACCACAGGGAGGAGTTGCTGCAGCATCACCCGGAGTTC
ATCGACCGCACGTTGCCATCCCTAGATGCCCGGATGGACATCGCAGCCACCGCCGTTCCGGACCTCGCGGCAGCGGCAGC
GGGCAAGGCCATCGCGGAGTGGGGCCGCCCAGCCGCCGACATCACCCACCTCGTCGTCAGCACCTACTCCGGCGCCCACA
TGCCAGGCGTCGACCTCCGCCTGGCCTCCCTCCTCGGCCTCGACCCGTCCGTCCGCCGCACCATGCTCTACCTCAACGGC
TGCTCCAGCGGGTCCGCCGCGCTCCGCGTCGCCAAGGACATAGCCGAGAACAACCGCGGTGCCCGCGTCCTTGTCGCCTG
CGCCGAGCTCACCCTCATCTTGTTCCGCGCGCCCGACGAGGCCCA---CGTCGACACGATCATCATGCAGGCTCTCTTCG
GCGACGGCGCGGCCGCCGTGATAGTCGGAGCCGAACCCGACGCCT---CCGCCGAGCGCCCGATTTTCGAGATGGTGGCC
GCCTCGCAGAGCGTGATACC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr7D_1386
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GTCCCTCGACGCCCCGCTGGACGTCGTGGCTACCGCCGCCCCGGAGCTCGCCGCGTCGGCTGC
GGCGAACGCCATCGCCGAGTGGGGCCGTCCGGCGGGCGACATCACCCATCTCGTCGTCAGCACCAACGCGGGATCGCACG
CCCCGGGCACCGATGTCCGCTTGGTCTCCCTCCTCGGCCTCCGCCATGATGTCCTGCGCACCGTGCTCCAGCTCAACCGC
TGCGCTTCCGGGTGCGCCGCCCTGCGCCTAGCCAAGGACCTCGCCGAGAACAACCGCGGCGCGCGCGTCCTCGTGGCCTG
CGTCGAGCTCACCGTCACCGCCTTCCACGCACCTCACGAGGCGGACACCTTCGACACCCTCATACCCCAGGGGCTCTTCA
GTGACGGCGCCGGCGCCGTCATCGTGGGCGCCGACCCTGACGTCCA------CGAGCGCCCGCTGTTCGAGATGGTGTCG
GCCTCGCAGTATGTGATACCAGACACCGAGCACATGCTCACCATGCAGCTCGGGAGCGGTGGCATCGGCGGGACCATCGC
CACCGGACTGCCAAGACTGGCTGCA------GGCATCGTTGAGCGGTGCCTGCTGGATGCGTTCGGCAACCACCTAGTCG
TCGTCGGAGGCGTAGTCGAATGGAACAACCTCTTCTGGGCAGTGCATCCCGGCAGTAGTGCGATGCTCGACCACATCGTC
AGGGCGCTCCGGCTGGCCCCGGGGAAGCTGGCGGCGAGCAGAACCGTGGTGAGAGAGTATGGTAACATGCTTGGCGCCAC
GGTTATCTTTGTGCTCGATGAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4A_1386
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GTCCCTCGACGCCCGGCTGGACGTCGTGGCTACCGCTGCCCCGGAGCTCGCTGCGTCGGCTGC
GGCGAACGCCATCGCCGAGTGGGGCCGTCCGGCGGGCGACATCACCCATCTCGTCGTCAGCACCAACGCGGGGTCGCATG
CGCCGGGCGCCGACGTCCGCTTGGTCTCCCTCCTCGGCCTCCGCCATGATGTCCTGCGCACTGTGCTCCAGCTCAACGGC
TGCGCTTCCGGATGCGCCGCCCTACGCCTAGCCAAAGACCTCGCCGAGAACAACCGCGGCGCGCGCGTCCTCGTGGCCTG
CGTCGAGCTCACTATCACCGCCTTCCGCGGGCCCAACGAGGCGGACTCCTTCGACACCCTCATCCCCCAGGGGCTCTTCG
GTGACGGTGCAGGCGCCGTCATCGTGGGTGCTGAACCCTACGTCCA------TGAGCGCCCTCTGTTTGAGATGGTGTCA
GCCTCCCAGTATGTGATACCAGACACCGAGCACATGCTCACCATGCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr7D_2753
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------TCCCACGGTTATAGGATCGCAC
GAGGCGATCAAGAAGGCGACCAGGTTTCGCTTGCGCGCCGCCGGTGACGCCGTCGGTTCCCTCTCTCTCCGTCAGCTGCT
CCGGCGGCGGGAGGGAGGGGGAACCTCGGGTCTGTTCGCTAGGTGGGTGTGTGGTAGGGTTAGGGTTGAGGGAGACGCTG
CTGAGGCCGTTGCGGTGGTGTCGCGTTGGAATAAGTTTCTCCGGGCTCCGTTCGCGGTCAGGCGAGGCTTTTGCCTGCGT
CTAGGAGCCAGCGGGGTTGGGGATCCCCGGATCTCGTCGAGGTCGCGGCCTATGGTGGCTGGAGCTCCATCGGCACTGGC
CGTTTGGGTCCTCAGATGGGCGATGGATGCAGGGAGACGAAGACCTTTATTCTTCCTTGTTGGTATGATTTGCTGCTACT
GTTCTTCTTCTTCCTCTGCGCTGATGCTGGTGGGAGATCCTGCTTTGCCCGGGCGGATGGCCCGGCCGCGGTGCTGGACC
GGTCGGAT-------------------------------------------
>chr2B_2753
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----------------------------------------------------------TCCCACGATTATAGGATCGCAC
GAGGCGATCAATGTGGCGACCAGGTTTCCCTTGCGCGCCGCCGGTGACGCCGTCGGTTCCCTCTCTCTCCGTCAGCCGCT
CCGGCGGCGGGAGGGAGGGGGAACCTCGGGTATGTTCGCTAGGTGGGTGTGTGGTAGGGTTAGGGTTGAGGGAGACGCTG
CCGAGGCTGTTGCGGTGGTGTCGCGTCGGAATAAGTTTCTCCAGGCTCCGTTCGCGGTCAGGCGAGGCTTTTGCCTGCGT
CTAGGAGCCAGCGGGGTTGGGGATCCCCGGATCTCGTCGAGATCGCGGGCTATGGTGGATGGAGGTCCATCAACACTGGC
CGTTTGGGTCCTCAGATGGGCGATGGATGCAGCGAGACGAAGACCTTT-TTCTTCCTTGTTGGTATGATTTGCTGCTGCT
GTTCTTCTTCTTTCTCTGTGCTGATGCTGGTGGGAGATCCTGGTTTGCCCGGGTGGATGGCCCGGCCGCGGTGCTGGACC
GGTCGGAT-------------------------------------------
>chr2A_2753
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----------------------------------------------------------TCCCATGATTATAGGATCGCAC
GAGGCGATCAAGGAGGCGACCAGGTTTCCCTTGCGCACCGCCGGTGACGCCGTCGGTTCCCTCTCTCTCCGTCGGCCGCT
CCGGCGACGGGAGGGAGGGGGAACTTCGGGTCTGTTCGCTAGGTGGGTGTGTGGTAGGGTTAGGGTTGAGGGAGACGTTG
CCGAGGCCATTGCGATGGTGTCGCATTGGAATAAGTTTCTCTGGGCTTCGTTCGCGGTCAGGCGAGGCTTTTGCCTGCAT
CTAGGAGCCAGCGGGGTTGGGGATCCCTGGATCTCGTCGAGGTCGCGGGCTATGGTGGCTGGAGGTCCATCGGCACTGGC
CCTTTGGGTCCTCAGATGGGCGATGGATGCAGCAAGAAGAAGACCTTTCTTCTTCCTTGTTGATATGATTTGCTGCTGCT
GTTCTTCTTCTTCCTCTGTGCTGATGCTGGTGGGAGATCCTGCTTTGCCCGGGCGGATGGCCCGGCCGCGGTGTTGGACC
GGTCGGAT-------------------------------------------
>chr4B_2754
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-----------------------------------------------------------CCCACGATTATAGGATCGCAC
GAGGCGATCAAGGAGGCGACCAGGTTTCCCTTGCGCGCCGCCGGTGACGCCGTCGGTTCCCTCTCTCTCCGTCGGCCGCT
CCGGCGGCGGGAGGGAGGG-GAACCTCGGGTCTGTTCGCTAGGTGGGTGTGTGGTAGGGTTAGGGTTGAGGGAGACGCTG
CCGAGGCTGTTGCGGTGGTGTCGCGTCGGAATAAGTTTCTCCGGGCTCCGTTCGCGGTCAGGCGAGGCTTTTGCCTGTGT
CTAGGAGCCAGCGGGGTTGGGGATCCCCGGATCTCGTCGAGGTCGCGGGCTATGGTGGCTGGAGGTCCATCGGCACTGGC
CGTTTGGGTCCTCAGATGGGCGATGGATGCAGCGAGACGAAGACCTTTCTTCTTCCTTGTTGGTATGATTTGCTACTGCT
GTTCTTCTTCTTCCTCTGCGCTGATGCTGGTGGGAGATCCTGCTTTGCCCGGGCGGATAGCCCGGCCGCGGTGCTAGACC
GGTCGGAT-------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS-----------S-------SS--------S-----------------------S---------S------
------S---------S-S-----------------------------S-------S------S----------------
-------------------------------------------S----------------------------SSSSSS--
--------------------------------------------------------------------------------
-------S-----------------------------------------S------SS--------------------S-
--------SSSSSSSSSSSS------------------SS----S----SS-----S-S---------------------
-----S--------------------------------------------------------------------------
-------------------S-----------------------------------------SS-----------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------S--S--------------------------------------------
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-------------S----------------------------------------S-------------------------
--------------------------S----S------------------------------------------------
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------------S--------------S----------------------------------------------------
--------------------------------------------------------------------------------
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------------S-------------------------------------------------------------------
----------------------------------------------------S---------------------------
-------S------------------------------------------S----------------S------------
----------------------------------------------------------------------------S---
------------------------SS--------------S-------------S-------------------------
--S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------
--------------------S---S------------S--------------S---------------------------
----------------------------------------------------------------S---------------
-----S--------------------------------------------------------------------------
-S---------------------------S------------------------S--S----------------------
----------------------------S---------------------------------------------------
--------S-----------------------------------------S-----------------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_778
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--------------------------------------GGCGCCGCAAAAGTATACTG----------------------
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---------------------------------------------------
>reverse_2643
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--TCCCCAACAAGCACTCTTTCT---------------------------------------------------------
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---------------------------------------------------
