>input_sequence_55002
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------------------------------------------------------------------------ATGGCGAT
CGACCACGACTCCCCCTGCAAGGAGCTCCTCCCCAAGGACCGCCGCAGCATGGTA--------CCCTCCCGCCACGCCAT
TCCCCATTTCTTGCTCGCTCCTCCCCCCACCTGTGCTCCGCCTTCTTGATTCCTCGTGCTCCAC-TCCGGGAAGGAACGA
AACCGTTTCTTGATCTGTCATCGTCCTCCTTCCTTTTCCGTGCGTTACTGCTGCATTGGGCGGATTGCTGGTGTCGAGGC
TGTTGGGTGGATCCTGGGAGCAGTGAAATGGCGATGGATGGAAGATCGATCTCGCCATCTCGGAAAGATCGGTGTTTTTC
-CCTCTTCTTTATTAAACCCTCATTTGTCCTCTGCCACCGCTTTTAGGGGTTCGATTTATGTTCTTGCGTTCATTCCTGC
TGTGCAACTTCTAGTCTTCAAATTCTGGTAATTGTTGTTCGAAATGT-----ATGAAATCCTGGCCGGG----TAATCTG
TTCGTAACTGCTTCTCCTTCGGCTGATTCCCACGGACGAACACGTTGTGTGCATGGCCATGCTGG-----TTTCCATTTT
CAAGGAGAGCAATGTCTCTGAACAATCTTGTTGTTGTCGTCTGCAGGACGATGACGGCGCTGAACCGGAGGAGGAGGAGG
AGCTGGAGGAGGTTGAGGAGGATGAGGAGGTTGCGGAGGTGGAGGAGGAGGAGGCTGAGGAGGACGAGAAGTCTGCGGAG
GAGGTGGAGGAGCAGGAGCAGGTAGCGTCGGCGGACGGCGAGCGGTGGCCTCGGTGGCTGCGCCCCATGATGTCCGCGCG
CTTCTACACGCCGTGCAAGACGCACCCTGACTCGCGCCGGGGCGGCGTGCGCACCATGTTCTGCCTCGACTGCGCCGCCG
TCGCCGGCGCGCTCTGCTCCCTGTGCGCCGACCATGGCCACCGCGGCCACCACGTCATCCGGGTCCGCCGCTCCACCTAC
AGCAGCGTGCTCATCGTGTCGGACGTCCAGGGCCTCCTGGACGTCGACGGCGTGCAGACCTACGTCATCAACGGCGCGCG
CGTCGTCTTCCTCAGAGAGCGCGGCCCGCAGCAGAGGCACGCCCGCAGCGCCTGGAGCTTCGTCAACCAGTGCGGCTGTG
GCCGCGGCCTGCTCGAGGCCTTCCGCTTCTGCTCGCTCAGCTGCAAGTTCCCTGGCTGCCGCCACGACCGCAGCGCCTCC
TCCCC---TTCCTCCCCGCCGCGCAATGCCGCCGACCAGACCTCGACG---CC---ACCACCGCCGCCGCCTGCACACCG
GCGCAAGGGCATCCCGCACCGGGCACCGTTCGGCAACCTGGTCGTCTGA-------------------------------
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>chr1B_1_TraesCS1B01G086700
ACCACATTCAGCCAGTAGGTTGCGTTCTAGCGTGTCGACATCGTCGTTGAGAAATGAGGATATGTGAGGGGAGGAGGCAG
TGAGGAGGAGGTGGGATGGGTGCCAGAACGTTTGTGATGGTGACGCCCTGCCGACAGGCTTTTATAGTCGAGGACGAAGT
CGCGTGGCCATTCGAACAACCGTCTCGAGGAATTTGGGGGAGCGGTGGACGCCATTAATGGATCGTTGGCTACCGGTCAC
GTCGCCCACTCACCGGTGATTAACCGGGACACAATGATGCGTGTAT----GGTGTCGCGCTTCAAACCCGACCATGGCT-
-AGGAAGTAGAAGCTGAAACTTCCCTCCAGGCCGGT-GGTTGTTTTATGGAGCGAGTTCCATGCTAGCCTCCCCAGACTT
CAAATATGAAGGCCACGAGGTCGTTT--------AGCTACATAAACTATTTCGATCGGCACCCATGCGGCGACTCTACTA
GAGTGTCATTTTAGCCAAAAATCATCATACTGATAGTTATTATGCTGATCGGGGCCATACACGACTCTGATAGGGGTCCT
ATCGTGCTCTTCCCCTCTTGTGCACGGTGGCTGCGCCGTTGCTCCCCGCACCTAGCCACCCTCTTTTCTTTGACGCGCTT
GATTAGATCCGGGGTGGTCGTCCAACCCTTTTCACCGCCTTCTTTTCCGGGAGGACGACATATTTTTCATCTTGCAA---
ACGGCAAACCAATCATTTCTTCAACAACATTATCTAACTTGGATGATGTTTTGAAGGACAAGAGTCGACCAGAGGCGGCA
TCAAGCTTTCGCTCACACTGCCGCTCTTCCC---CTCAAGAAAGAGAGAGCCCATCAATGCAAGCCCGGCCCACCACTTC
CACT----ACAAGTCAGCCAGCCGAGCCGCGGCTCTGCTTCCGGAGTC------CACCCAACCCACCAATCCGCCGGCTC
TTGGATTCCCC-CCGCGGCGCCCCACCTTTTCCTCCGCCCTCGCCGCGCGGCGCGTGTCACGCCCAGCCGCCATGGCGAT
CGACCACGACTCCCCCTGCAAGGAGCTCCTCCCCAAGGACCGCCGCAGCATGGTA--------CCCTCCCGCCACGCCAT
TCCCCATTTCTTGCTCGCTCCTCCCCCCACCTGTGCTCCGCCTTCTTGATTCCTCGTGCTCCAC-TCCGGGAAGGAACGA
AACCGTTTCTTGATCTGTCATCGTCCTCCTTCCTTTTCCGTGCGTTACTGCTGCATTGGGCGGATTGCTGGTGTCGAGGC
TGTTGGGTGGATCCTGGGAGCAGTGAAATGGCGATGGATGGAAGATCGATCTCGCCATCTCGGAAAGATCGGTGTTTTTC
-CCTCTTCTTTATTAAACCCTCATTTGTCCTCTGCCACCGCTTTTAGGGGTTCGATTTATGTTCTTGCGTTCATTCCTGC
TGTGCAACTTCTAGTCTTCAAATTCTGGTAATTGTTGTTCGAAATGT-----ATGAAATCCTGGCCGGG----TAATCTG
TTCGTAACTGCTTCTCCTTCGGCTGATTCCCACGGACGAACACGTTGTGTGCATGGCCATGCTGG-----TTTCCATTTT
CAAGGAGAGCAATGTCTCTGAACAATCTTGTTGTTGTCGTCTGCAGGACGATGACGGCGCTGAACCGGAGGAGGAGGAGG
AGCTGGAGGAGGTTGAGGAGGATGAGGAGGTTGCGGAGGTGGAGGAGGAGGAGGCTGAGGAGGACGAGAAGTCTGCGGAG
GAGGTGGAGGAGCAGGAGCAGGTAGCGTCGGCGGACGGCGAGCGGTGGCCTCGGTGGCTGCGCCCCATGATGTCCGCGCG
CTTCTACACGCCGTGCAAGACGCACCCTGACTCGCGCCGGGGCGGCGTGCGCACCATGTTCTGCCTCGACTGCGCCGCCG
TCGCCGGCGCGCTCTGCTCCCTGTGCGCCGACCATGGCCACCGCGGCCACCACGTCATCCGGGTCCGCCGCTCCACCTAC
AGCAGCGTGCTCATCGTGTCGGACGTCCAGGGCCTCCTGGACGTCGACGGCGTGCAGACCTACGTCATCAACGGCGCGCG
CGTCGTCTTCCTCAGAGAGCGCGGCCCGCAGCAGAGGCACGCCCGCAGCGCCTGGAGCTTCGTCAACCAGTGCGGCTGTG
GCCGCGGCCTGCTCGAGGCCTTCCGCTTCTGCTCGCTCAGCTGCAAGTTCCCTGGCTGCCGCCACGACCGCAGCGCCTCC
TCCCC---TTCCTCCCCGCCGCGCAATGCCGCCGACCAGACCTCGACG---CC---ACCACCGCCGCCGCCTGCACACCG
GCGCAAGGGCATCCCGCACCGGGCACCGTTCGGCAACCTGGTCGTCTGACTCCACCCAGGGTTGC-----AGTGAAGTTT
TGACAGGGAGAAGAGATTACTGAGTAGCCTTTGCCATCATTAGGACTGAAAATCTTCTGCAGCTAAGTTATGCAGATGAT
CCTGCTGTGCAACTA--------------CTGGTAATGTTCTTAACTTTTTTGATG-ATGTCCTGAGAA-AAAATTGGAT
GACATGAGAAACTAGTCTAATAGTATGACCAGCCAGGTAACAATGCAATAGTTTTGTGGTGGCCTTTGAGTCTTGATTGC
TGCTAGTTGCAGTTGATCTGTGTGTAAATATGGTTGCAGGCTGCAAGATGGGGGGATTGGGGGTGGGAGCATGCTTGCTA
ATTGAATTCAGCTATATGCTTCCTGACTGTCTTTTTT---GCTAAACTACGCTTTGAGGCATCTTCAAATTCCTTGATAT
GGATGCCATTTCATC---GTGCAAATGCCCAGATGCTGTTGATTGATATTGATGTTGCCA-TTTTGCCAATTATGTTGCT
AATGTGAAATTTGAATCCTTTTGCTCTGATTATTACTAGTACTGATCATGCTTTGATCTAGTTCTTCCTTCAATCATGGG
TTGAGTAATGATATT--GAGATACTTTGATATGAATTTGCATAGGTGGTAT--TTGGTTTCTGAGTGCAAAAACATGGGC
ATCT---ATCTGCAATGCTCTGCTTCATGAGCAGGACCTAAGATTTTC-CGCTGCTTGCACGCAT---------------
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----------------------------------------TGAAAGTTGAGGGCAGATAATATGGCAAGTGATCCGGCTA
TTAATTTGTGGAATCATCATGTAATTAAGCATTGGATAGT----CTTAATTCATGAAAATTGGCGTGCAATTAATCCTTT
TGTCAAATGTATGGATTACACTGTTAATTAAGCAAAACAAGTCAGATAGCTAGTATTCTGCAGTCCACCTTAGCAATATA
CTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGCCTAGATACGGATGTATGTGTACATCCGTATCTAGGCAAATCTAAG
ACAAGAATTTTGGGACGGAGGGAG
>chr1D_276
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-----------------------------------GATGCGTGTATGAGCGGCGTCGCGCTTCAAACACGGCCATGGCAC
GAGGAATTAGAATCTGGAACTTTCCTCCTACATTGGCGGTTGGTATATGAAGCGAGCTCCATGTTGGCCTCCCCAACCTT
CAAATATGGAGGCTACGAAGTTGTTTATTTAGCGAGCTTCATAAACTATGCCGATCGACACCCATATGGCGACACTGCTA
GAGTGTAATTCTGGCCAAAAGTCACTATATTAACAGTTATTATGTTGATCTGGGTCATACACGACTTTGCTAGAGTTGTT
CTTATCTCC--CCCTTTTTGTGCAACAGTGGTATGTTGTTGCCCACCTCTGCTCTTAGCCACGCACGCATAACTAGACCT
----------GGGGTGGTCGTCCAACCCTTTTCATCGCCTTCTTTTCT-GGATGGCGATATGTTCTTCATCATCTTCTGG
ACGACCACCCAATCATTCCTTCAACAACATTATCCTAACTTG-TGATGTTTTGAAGGGCT----------AGAGGCGGCA
TCAAG-TTTCGCTCACACTGCCGCCCCTGGTCCACTCAAGAAAGAGTGAGCCCATCAATACAAGCCCAGCCCATCACTTC
CTGTAGAGACAAGTCAGCCAGCCGAGCCGC--CTCTCCTTCCGGAGTC------CACCCAACCCACCAACCCGCCGGGCT
CTTGGATTCCCACCGCGGCGCCCCACCTTTTCCTCCGCCCTCGCCGCGCGGCGCGTGTCACGCCCAGCCGCCATGGCGAT
CGACCACGACTCCCCCTGCAAGGAGCTCCTCCCCAAGGACCGCCGCAGCATGGTAAAACCCTACCCTCCCGCCACGCCAT
TCCCCATTTCGTCCTCGCTCCTCT-CCCCCATGTGCTCCGCGTTCTTGATTCCCCGTGCTCCAC-TCCAGGGAAGAACGA
AACCGTTTCTTGATCTGTCACCCTCCTCCTTCATTTTCCGTGCGTTACTGCTGCATTGGGCGGATTGCTGGTGTCGAGGC
TGTTGGGTGTATCCTGGGGGCAGTGAAATGGCGATGGACGGAAGATCGATCTCGCCATCTCGGAAAGATCGGTGTTTTTT
TCCCTCTCCTTCAAAAACCCTCGTTTGTCCTCACCCACCCCTTCCAGGGGTTCGATTTTCGTTCTTGCGTTTTTTCATGG
GTAGGTAGTATCGCATTTGGTTGCGTTG--------GTTCGGAATGAACGAAATGAAATCCTGGCCGGGTGGTTAATCTG
TTCGTAATTGCTTCTCCTTCGGCGGATTCCCACGGACGAACACGTTGCGTGCATGGTCATTCCCTGGTGATTTCCATTTT
CAAGGAGGGCAATCTCTCTGACCAATCTTGCTGTTGTCGTCTGCAGGATGATGACGGCCCTGAGCCGGAGG---------
------AGGAGGTTGAGGAGGACGAGAAGTCTGCGGAGGTGGAGGAG---------GAGGAGGTCGAGGAGTCTGCGGAG
G---CGGAGGAGCAGGAGCAGGTGGTGTCCGCGGACGGCGAGCGGTGGCCCCGGTGGCTGCGCCCCATGATGTCGGCGCG
GTTCTACACGCCGTGCAAGACGCACCCTGACTCGCGCCGCGGCGGCGTGCGCGCCATGTTCTGCCTCGACTGCGCCGACG
TCGCCGGCGCGCTCTGCTCGCTGTGCGCCGACCAGGGCCACCGCGGCCACCACGTCATCCGGGTCCGCCGCTCCACCTAC
AGCAGCGTGCTCATCGTGGCGGACGTGCGGGGGCTCCTGGACGTGGACGGCGTGCAGACCTACGTCATCAACGGCGCGCG
CGTCGTCTTCCTCAGGGAGCGCGGCCCGCAGCAGAGGCACGCCCGCAGCGCCTGGAGCTTCGTCAACCAGTGCGGCTGCG
GCCGCGGCCTGCTCGAGGCCTTCCGCTTCTGCTCGCTCAGCTGCAAGTTCCCCGGCTGCCGCCACGACGGCAACGCCTCC
TCCTCGCCTCCCTCCCCGCCGCGCAATGCCGCCGACCAGGCCTCGACG---CCACCACCGCCGCCGCAGCCTGCACACCG
GCGCAAGGGCATCCCGCACCGGGCACCGTTCGGCAACCTCGCCGTCTGACTCCAGCCAGGGTTGC-----AGTGAAGTTT
TGACAGGGAGAAGAGATTACT-AGTAGCCTTTGCCATCATTAGGACAGAAAATCTTCTGCAGCTAAGTTATGCAGATGAT
CCTGCTCTGCTACTTCTAGTCTTCAACTTCTGGTAATTGTTCTTAACTTTTTGGTAGATGTCCTGAGAA-TTTTTTGGAT
GTCATGAGAAACTAGTCTAATAGTATGACCAGCCAGGTAACAATGGAATAGT------------TTTGAGTCTTGATTGC
TGCTAGTTGCAGCTGATCTGTGTGTAAATATGGTTGCAGGCTGCAAGATGGGGGGATTGGGGATGGGAGCATGCTTGCTA
ATTGAATTCAGCTATGTGCTTCCTGACTGTTTTTTTTTTTGCTAAACTATGCTTTGAGGCATCTACAAATTCCTTGATAC
GGATGCCGCCGTTTTACTGTGCAAATCCCCAGATGCTGTTGATTGATATTGATGCTGCCA-TTTTGCCAATTATGTTGCT
AATATGAAATCTGACTCCTTTTTCTCTGATTATTACTTGTACTGATCATGCTTTGATCTAGTTCTTCCTTCGATCATGGG
TTGAGTTAAATGAAACAGCGATACTTTGATATGAATTTGCATAGGTGGTATATTTGGTTTCTGAGTGCAAAAACACATGG
GCATCTA-TCTGCAATGCTCTGCTTCAAGAGCAGGACCTAAGATTTTCT-GCTGCTTCCACACATTGGGAACACTTGACT
GAGATCATCTTCGTCAAGAGCAGGCCTTGACGCCACCGCCGCAGCCTGCACACCGGCGCAAGGGCATCCCGCACCGGGCA
CCGTTCGGCAACCTCGTCGTCTGACTACTACAAGGTTGCAGTGAAGTTTTGACAGGGAGAAGAGATTACTGAGTAGCCTT
TGCCATCATTAGGACTGAAAATCTTCTGCAGCTAAGTTATGCAGATGATCCTGCTCTGCAACTTCTAGTCTTCAACTTCT
GGTAATGTTGTTAACTTTTTTGATGATGTCCTGAGAAAATTTTGGAGGACATGAGAAACTAGTCTAATAGTATGACCAGC
CAGGTAACAATGGAATAGTTTTGTGGTGGCTTTTGAGTCTTGTTGCTGCTAGCTGCAGTTGATCTGTCTGTAAATATGGT
TGCCGGCGGCAAGATGGGGGGATTGGGGATGGGAGCATGCTTGCTAATTGAATTCAGCTATATGCTTCGTGACCGTGTTT
TTTTGTGTGTGCTAAACTATGCTTTGAGGCATCTTCAAATTCCTTGATATGGATGCCCAGATGCTGTTGATTGATATTGA
TGCTGCCATTTTGCCAATTATATTGCTAATATGAAATTCGAATCCTTTTGCTCTGATTATTACTAGTACTGATCATGCTT
TGATCTAGTTCTTCCTTCGATCATGGGTTGAGTTAAATGGAATTGAGATACTTTGATGTGAATTTGCATAGGTGGTGCAT
CTGTCTGCAATGCTCTGCTTCAGAGCAGGATCTAAGATGTTCCCCTGTTCGAACACCAGCAGGTCGACTGAGATCATCTT
CGTTAAGTAAAGCAGTTTTTTTTTCTCTTCGTGCAATTTTCAGCAAAAGAGTACACACATGGAGATACATTGTTTACTTG
CGCAAGAGCTTTTTCTTCAACCATTAGCCTGCCCAAAAAGAAAAAGAAAAATATCTTCTTAAGGGATAATGCAGGCAACA
ACCGCAACATGTTTGCACATTTTATTCCACAGGCCCCACATCTATTTTCCTTTCCCGTGGCAATGAGCATGCACCTTGCA
CGAAGCTGTCGAACGTGTGACACTTTCATAAGGTGCAATTTTGCTGTCCTATTGGGGGGTTGTCTGATGAGCATTTGAAG
CTCAACACATGCGACATTTCTGTCCTGTACCGCTTACGCAACAAACGATTTCTCAAACATTCTACTCCCTTCAATCCATA
TTAATTGTCAACTTTGTACTAACATCAGTGATAATTAATATGGATCGGATGGAGTAAAATGCATATCAAATTGAGTATGC
ATTTTCGTTCTTGTATGACTTTGGAACTGTAGCTTGCCTAGAGCTTCCGAAGCAGAGCAGAATGCCTGGATGGAGCGAGA
CGTATTGAAGCGATTGCTCGCTCGTTGTATTGAACAAGAGTGAAAGTTGAGGGCAGATAATATGGCTAGTGATCCAGCTA
TTAATTCTTGAAATCATCATGTAATTAAACATTGGATAGTCTTACTTAATTCATGAAAATCGGCGTGCAATTAATCCTTT
TGTCATATGTATGGATTACACTGTTAATTAAGCAAAACAAGTCCGATAGCTAGTATTCTGCAGCACTTTAGCTATAT---
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>chr1A_827
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-----------------------------------------------GAGCCCATCAATACAAGCCCGGCCCACCATTTC
CTCCACGAGTCAG--AGCCAGCCGATCCGC--CTCTCCTTCCGGAGTCCACCCGCACCCAACCCACCAACCCGCCGGGCT
CTTGGATCCCC-CCGCGGCGCCCCACCTTTTCCTCCGCCCTCGCCGCGCGGCGCGTGTCACGCCCAGCCGCCATGGCGAT
CGACCACGACTCCCCCTGCAAGGAGCTCCTCCCCAAGGACCGCCGCAGCTTGGTAAAACTCT-----------ACGCCAT
CCCCCATTTCTTGCCCGCTCCTCT-CCCTCCTGTGCTCCGCGTTCTTGATTCCCCGTGCCCCACCTCCGGGAAAGAACGA
AACCGTTTCTTGATCTGCCACCCTCCTCCTCCCTTTTCCGCGCGTTACTGCTGCATTGGGCCGATTGCTCGTGTCGAAAG
CGGTAGGTGGATCCTGGGGGCAATGCAATGGCGATGGACGGAAGATCGATCTCGCCATCTCGGAAAGACGGGCGTTTTCC
-CCCTCTCCTTCAAAAACCCTCTCTTGCCCTCACCCACCCCTTCCAGGGGTTCGATTTTCGTTCTTGCGGTTTTTCATGC
GTGGGTAGTGCCGCATTTGGTTGCGTTG--------GTTCGAAATGAACGGAATGAAATCCTGCCCGGGTGGTTAATCTG
TTCGTAATTGCTCCTCCTTCGGCGGATTCCCACGGACGAACACGTTGCGTGCATGGCCATTCCCTGGTGATTCCCATTTT
CAAGGAGGGCGATCTCTCTGACCGATCTTGCTGTTGTCGCCTGCAGGATGATGACGGCCCTGAGCCGGAGG---------
------AGGAGG---------ACGAGAAGTCTGCGGAGGTGGAGGAG---------CAGGAGGACGAGGAGTCTGCGGAG
G---TGGAGGAGCAGGAGCAGGCGGCGTCCGCGAGCGGCGAGCGGTGGCCCCGGTGGCTGCGCCCCATGATGTCGGCGCG
CTTCTACACGCCGTGCAAGACGCACCCCGACTCGCGCCGCGGCGGCGTGCGCGCCATGTTCTGCCTCGACTGCGCCGACG
TCGCCGGCGCGCTCTGCTCGCTGTGCGCCGACCAGGGCCACCGCGGCCACCGCGTCATCCGGGTCCGCCGCTCCACCTAC
AGCAGCGTGCTCCTCGTGGCGGACGTCCGGGGCCTCCTGGACGTGGACGGCGTGCAGACCTACGTCATCAACGGCGCGCG
CGTCGTCTTCCTCAGGGAGCGCGGCCCGCAGCTCAGGCACGCCCGCAGCGCCTCGAGCTTCGTCAACCAGTGCGGCTGCG
GCCGCGGCCTGCTCGAGGCCTTCCGCTTCTGCTCGCTCAGCTGCAAGTTCCCCGGCTGCCGCCACGACGGCAACGCCTCC
TCCCCCCCTTCCTCCCCGCCGCGCAATGCCGCCGACCGGACCTCGACGCCACC---GCCGCCGCCGCAGCCTGCACACCG
GCGCAAGGGCGTCCCGCACCGGGCGCCGTTCGGCAACCTCGCCGTCTGACTCCAGCCAGGGTTGCATTGCAGTGAAGTTT
TGACAGGGAGAAGGGATTACTGAGTAGCCTTTGCCATCTTTAGGACTGAAAATCTTCTGCAGCTAAGTTATGCAGATGAT
CCTGCTCTGCAACTTCCGATCTTCAACTTCTGGTAATTGTTCTTAACTTTTTGGTA-ATGTCCTGAGAATTTTTTTGGAT
GTCATGAGAAAGTAGTCTAATAGTATGACCAGCCAGGTAACAATGGAATAGTTTTGTGGTGGCTTTTGAGTCTTGATTGC
TGCTAGCTGCAGCTGATCTGTCTGTAAATATGGTTGCCGGCGGCAAGATGGGGGGATTGGGGATGGGAGCATGCTTGCTA
ATTGAATTCAGCTATATGCTTCCTGATTGTG-------------------------------------------------
--------TTTCATC---GTGCAAATGTCCAGATGCTGTTGGTTGACATTGATGTCGCCATTTTTGCCAATTATGTTGCT
AATATGAAATTTGAATCCTTTTGCTCTGATTATTACTTGTACTGATCATGCTTTGATCTAGTTCTTCCTTCAATCATGGG
TTGAGTTAAATGAAACCGAGATACTTTGATATGAATTTGCATAGGTGGTATATTTGGTTTCTGAGTGCAAAAACACATGG
GCATCTAATCTGCAATGCTCTGCTTCAGCAGCAGGACCTAAGATTTTTACGCTGCTTGCACACAT---------------
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----------------------------------------TG--------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S--------------S--S-------S-
------S-----S---S-----S-----SSSSSS-S------S-S----S------S------S-S---------SS---
--------S----S----S--S----------------S----------SS------S-------SS------S--S---
------S---S-S-------S---SS---S-S-S----------S-----S---S-----------S--S---S-S-SS-
S-SS-SSS-SS---S-S-------SSSSS-S-SS-SS-----S-S--S-SS--SSSSS--SSSSSSS-S-SSSSSSS-S-
SSSSSSSSSS------------------------S------------SS---S-S---S--S--S------S-SSSS---
---S-S-S---------S----------------SS-SS-S-S--------------S-SSSSSSSSSSS----------
-----S------------------S-S-SSS---------------S------------S--------------------
-S----------------------------SS----S--------------------------------S-------SSS
S-S-SS--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------SS---S------------S-----------S-------------------S------
--------------------S-S---------------------------------------------------------
------------------S-------------------S-----------------------------------------
---SSS--S--SSS--------S---------SS-----S---SS-------------SS-----------SS---S---
SSS-SS-S-S-SSSSS--SSSSSSS-S-SSSSSSSS----------S---------------------------------
-------S---------------S-----------------------S------------S-SSS---------------
-------S-----S-------S--------S-----------------S---------S----S-------SSSSSSSSS
SSSSSS----------------S---S--SS----------------SSSSSSSSS------------S-----------
-SSS-------------------S-----S--------------------S-----------------------S-----
---------------------------------------S------------S------------------------S--
-------------------S--------------S---------------------------------------------
------------------S---------S---------------S-----------------------------------
---------------S--------------------------------------------------------------S-
----------------------------------------------------S---------------S---S-------
-----------------------------------------------------------S-------S------------
---------------------------------------S-S------------S-------------------------
--------------------------------------------------------------------------------
------S-------S----------------------SS-SS-S-SS------S-S--------------SSSS------
-S-------------------------------------------S-----------------S----------------
------------S-------------------------------------------------S-----------------
------------------------------S------------------S--------------S--------------S
-------S------------------------------------------------------------------------
---S---------------------------------S------------------------------------------
------S-SSSS-SS------------------------------------------------------------SSS-S
SSS------------------------S---------------------------------S------------------
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------------------------------------------------------------------S--------S----
------SS--S-----------------S-------------------------------S-------------------
-----S-------------------------------------S-------------------SS-SSSSSSSSS--SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_571
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-----------------------------------------------------------------------AGGGGTCCT
ATCGTGCTCTT---------------------------------------------------------------------
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>reverse_1893
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----------------------------------------------------ACCATGTTCTGCCTCGACTG--------
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>forward_627
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-----------------------------------------------GCACCTAGCCACCCTCTTTT-------------
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>reverse_2375
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------------------------------------------------------CCCAGGGTTGCAGTGAAGTT------
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------------------------
