>input_sequence_54941
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-----------------------------ATGTTTCCGGCGGAGGCGTCGTTCGCCGGCGCCGAGGCGGCCATGCTGCCG
CCCTTCTTCGTGGGCTCCATGTGGCAGTCGGCGCCGGGCGGCGGCGTCGCGGCTGCCTTGTCCGAGGAAGACGAGGTAGC
CGCCGCTGCGGCTGCCGAGGCGGCGCACGACCGCGCGGTGGTGGCGACGCGGAACCACCGTGAGGCCGAGAAGCGCCGCC
GCGAGCGGATCAAGTCGCACCTCGACCGCCTCCGCGCCGTCCTCGCCTGCGATCCCAAG----GCAATTTCATTACACAT
CTAAGTCCTGTGCCCTCGTGATTTCCCCCTAATTTAGTTTCTGCGCAACATGCTCGATCGATGCGAGATCGATCAAGCGA
AATCTTTTATTGAAGAACTGGATTGCCTGTCATCCATCTGGAATTCTACCGTGGATTGCAGTGGGTAGATGCTATCCCCA
TGAGTAGCTAGC--TGCTACGGTTCTCAGCTCAGCTAATCCTTGTGATTAAAGCTGGATTTTGTGTGTGCAAGTAGCACT
AGAATGGAGCCTCTCCTAACTACTAGCTGCTATCATCCTATGAATGACACTGACTAGCTAGGTCAGGTTAGGGCTGCCCC
TCGTCTCTTGGCTTGTTCCTCTTCATGATTTGCTTCTTTTGTGCCTAGTACCATGTCTACAATTTTGCATAATTTTT-CA
CATTCTCCTCTCTACCCTTTTTCATTTCTGATCAATCATAAGCTCTAGGGTTCGTCATTTGAGAGATTGATTGTGCAAAC
AAGGTTTCTTGATGAACTTTAGCTCATGAACTGATCTTCTACATGTGTGTTTACAGATAGACAAGGCAACGCTGCTGGCC
AAGGCGGTAGAGAGAGTGCGGGAGCTGAAGCAGCGCATGGCCGGCGTCGTCGGCGAGGCGG---CCGCGCCGGCGAGCCA
CCTGTTCCCCACGGAGCACGACGAGATCGTGGTGCTCGCTTCAGGCGGCGGTGCCGGCGGCGCGGCGGCTGTGTTCGAGG
CCTCCCTCTGCTGCGACGACCGCTCCGACCTCCTCCCGGGGCTCATCGACACGCTGCGCGCGCTCCGCCTCCGCACGCTC
CGCGCCGAGATGGCCACCCTCGGCGGCCGCGTCCGCAACGTGCTCGTCCTCGCGCGCGACGCCGGAGAACACGCTGACGA
CGACTACTCCTCATCCTCCGAGGACGGCGGCGCCGACTTCCTCAAGGAGGCTCTGAGGGCCCTCGTGGAGAGGCAGGGGG
CTGCCGCGGGCGACCGGCCCAAGAGGAGACGCGTCGCTGACATGAACATGCAAGCGGCGGCTTAA---------------
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>chr5B_1_TraesCS5B01G478000
CCTAGTGAGCAAGTAACCGGCCCGTCCTTCAATATGCTTGACGCTCCGCGACTGGCTTACACGAAGTTGATGATCAGTCC
CTGTGTGCGCCATTGGTCAGGTTGTGGGCTTGGGCCGCCCTGTGGCCCAATGAGCCGACTGCCGGCCTACGAGTACACCC
AGGGGCCTGCCATCATCAACCAGTGTGGTATTTTCTCAAAAAGAAAATAAATCAACCAGTGTAAACCAAATACCCTGGTA
TTAATACCAATCCTTAATTTGGATTTCAACTAAACTTGTTAATACAAGCATGATCTGGCGACTGGTCACGCAAGGAAAAC
CCGGGACGCACTTTTCTCTTCTCCA--------TAGACAGAGAACTACTTGGGTTTCACTTTCATCCAACTGGCTAGTTG
A--------AGTGGTAGTGCAACAACGCGGCAAGACAAGGCAAA-CATTCCCCCGGAGTGTGAGCTAGCG------TACG
CTGTTGCACCGGAGTCAAACGGTCGATCCGGACGGATCGCCATCACCGCCACGGCCGTATCCCGTCGGAGCGCGACGGCC
GGCGCAAGGTCGGCACCATCGCAGCCGTCCAACCGCCCCCGCCGGGACATCTCTACCACTCTAGG---------------
---------CCATCGGCCATCATCCCGTCATCCCTAGCTCACAGGGCTCGTACAGGCACAGCCCTCTATCTCTGACGGGT
CAACAAGCGGGCCCACCGGCCACTCA-----CTCACCTCACGTCGCCCCGTCTCTCTCTAACATTCCCCCC--T------
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------------------------------------------------------------------CTCTCTCTATCTCT
ATCCACCCACATGCGCTCTCCCTCTCTC----CTCGAAGCCCCGTTTATTTATTCTCGCCTCTCCTCGTTCC--------
-------CCCATCCCATCCGTCTCTCTCTTCTCTCCTCTCTTCGATTCCAGTCCATGTCCGAGGAACAGTAGTTAGTTCA
CGGCACAACACCACCGCGGCAATTAGTTAGTTAGTTAGCTAGCAGCTTGACGAGGTGTGATCGAGGCAGAACCTGGGCGA
---GAAGCT-CTAGGTAGCTCTGGCGGGCATGTTTCCGGCGGAGGCGTCGTTCGCCGGCGCCGAGGCGGCCATGCTGCCG
CCCTTCTTCGTGGGCTCCATGTGGCAGTCGGCGCCGGGCGGCGGCGTCGCGGCTGCCTTGTCCGAGGAAGACGAGGTAGC
CGCCGCTGCGGCTGCCGAGGCGGCGCACGACCGCGCGGTGGTGGCGACGCGGAACCACCGTGAGGCCGAGAAGCGCCGCC
GCGAGCGGATCAAGTCGCACCTCGACCGCCTCCGCGCCGTCCTCGCCTGCGATCCCAAG----GCAATTTCATTACACAT
CTAAGTCCTGTGCCCTCGTGATTTCCCCCTAATTTAGTTTCTGCGCAACATGCTCGATCGATGCGAGATCGATCAAGCGA
AATCTTTTATTGAAGAACTGGATTGCCTGTCATCCATCTGGAATTCTACCGTGGATTGCAGTGGGTAGATGCTATCCCCA
TGAGTAGCTAGC--TGCTACGGTTCTCAGCTCAGCTAATCCTTGTGATTAAAGCTGGATTTTGTGTGTGCAAGTAGCACT
AGAATGGAGCCTCTCCTAACTACTAGCTGCTATCATCCTATGAATGACACTGACTAGCTAGGTCAGGTTAGGGCTGCCCC
TCGTCTCTTGGCTTGTTCCTCTTCATGATTTGCTTCTTTTGTGCCTAGTACCATGTCTACAATTTTGCATAATTTTT-CA
CATTCTCCTCTCTACCCTTTTTCATTTCTGATCAATCATAAGCTCTAGGGTTCGTCATTTGAGAGATTGATTGTGCAAAC
AAGGTTTCTTGATGAACTTTAGCTCATGAACTGATCTTCTACATGTGTGTTTACAGATAGACAAGGCAACGCTGCTGGCC
AAGGCGGTAGAGAGAGTGCGGGAGCTGAAGCAGCGCATGGCCGGCGTCGTCGGCGAGGCGG---CCGCGCCGGCGAGCCA
CCTGTTCCCCACGGAGCACGACGAGATCGTGGTGCTCGCTTCAGGCGGCGGTGCCGGCGGCGCGGCGGCTGTGTTCGAGG
CCTCCCTCTGCTGCGACGACCGCTCCGACCTCCTCCCGGGGCTCATCGACACGCTGCGCGCGCTCCGCCTCCGCACGCTC
CGCGCCGAGATGGCCACCCTCGGCGGCCGCGTCCGCAACGTGCTCGTCCTCGCGCGCGACGCCGGAGAACACGCTGACGA
CGACTACTCCTCATCCTCCGAGGACGGCGGCGCCGACTTCCTCAAGGAGGCTCTGAGGGCCCTCGTGGAGAGGCAGGGGG
CTGCCGCGGGCGACCGGCCCAAGAGGAGACGCGTCGCTGACATGAACATGCAAGCGGCGGCTTAATCAATCAGCTAGTTG
GCCGGCCGGCGGCCATAGCTCATAGTAT------CTGATACGG----TTGCATATGGCGATCGATCTCATGCATGCCATG
GTAATGG------TACTACTACTATACAGCGTGTTAATTTGCTTTCAAAGTTAACTAGTTTTGTGTGATGGTTAATTACT
TCCAATTCTCCATATATACCACTATATGGCTAGCTAACTCTCCTTGGTGATGCCAATATGCCATGTATAATTAGGGATAT
ATATTACCACTCTTTTAATTTACCATTAGGGTTTGCTTGAGCTTTAATCAAATGTTGCTTCAAAGCCATGGCAAACCCAG
CCCCTAAAATAACAGTTCATGTCAGAATATATGCACAATGCAAAGTTCCAGACTTGA-TTGCCATATGCTACATATACAT
TGGATAACTCTGGAAGCATTTCTGTTTACAAGATCCCACACAAGTCCATTTTTGATTATGTCAGGCCATGCAGCTAGCTA
GCCA----TATATGCATGCATGCATGTAAGACAAGTCTTCGGATCAAACGAAGATGTTTGCATGCATACATGTAGCAATG
CATGGCAAGTCCTGAGATCAAAACAAAGATGTTTGTTCCAACGCATTGCATAGCAATGTAGCAGCATGCTTCCTGTCTGT
CTGGTCTTGTGAAT-----------GAATGAATGTTTGGGGCTTGGACATATTGAATGATCTAGGCATGCATATGCCAGT
TTGATTGTTTGAATATGGAGGAGAGGAAAGGGGAACCAATCAATGATTGCTTGTGTTGGTGCATGCTGCAGTGCACAGAA
GTATGGCTAGCCAGTGTGGCATGCAGCAG-------TGAGAGCAGCTAGCCCTCATGACTACACATGAGTGCATGCATGG
ACTAGTTTGCTAGTACTGGTACTACATGCATGCTGATGCCTGCTGCTGCATGCCCTGTCTGGTCTGGGAAAGGGGGGAAG
GTGGATGAGCTTTTGTTTCTTGCTGGTTTCCTTTTGTAATCTTGCTCCTCTATGGCTTTTTTAG
>chr5D_6
-----TGAGCAAGTGACCGGCCTGTCCTTCAATATGCTTGACGCTCCGCCACTGACTTACACCAAGTTGATGATGCATCC
CT-------CCATTGTTTAGGTCGTGGGCTTGGGCCGCCCTATGGCCCAATGAGCCGACTGCCGGCCTACGAGTACACCC
AGGGGTCTGCCATCATCGACCACTGTGGTATTTTCTCAACAACGAAAG--ATCAGCCAGTGTGAACC-AATACCCTGTTA
TTAATACCAGTCCTTAATTTGGATTTCAAATGAACTTGTTAATATCAGCATGATCTGG-------TCACGCAAGGAAAAC
CCGGGACGCACTGTTCAATTCTCCATAGGTGGATAGAGAGGGACCTACCCGGGTTTCACTTTCATCCAACTGGCTAAGCT
AGTTCAGGCAGTGGTAGTGCCACAACGCGGCAAGGCAAGGCAAAACATTCCCCGGGAGTGTGAGCCAGCG------TACG
CTGTTGCACGGGAGTCAAAC----------GACGGATCGCCATCACCGCCACGGCCGTATCTCGTCGGAGCGCGACGGCC
GGCGCAAGGTCGGCACCATCGCAGCCGTCCAACCGCCCCCGCCGTGACATCTCTACCGCCCCTAGAGCCAGCTAGACCAG
CACCACCTCCCATCGGCCATCATCCCGTCATCCCTAGCTCACAGGGCTCGTACAGGCACAGCCCTCTATCTCTGACGGGT
CAGCAAGCGGGCCCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTCTCTCTCTCT
ATCCACCCACATGCGCTC----TCTCTC----CTCGAAGCCCCGTTTATTTATTCTCGCCTCTCCTCGTTCC--------
-------CCCATCCCATCCGTCTCTCTCTTCTCTCCTCTCTTCGATTGCAGTCCATGTCCGAGGAACAGTAGTTAGTTCA
CAGCACAACACCACCGCGGCAATTAGTTTGTTAGTTAGCT-------TGACGAGGCGTGATCAAGGCACCTCGGCGTGAA
GCTCTAGCTTCTAGCTAGCTCTGGCGGGCATGTTTCCGGCGGAGGCGTCGTTCGCCGGCGCGGAAGCGGCCATGCTGCCT
CCCTTTTTCGTGGGATCCATGTGGCAGTCGGCGCCGGGCGGCGGCG---CGGCGGCCTTGTCCGAGGAGGACGAGGTAGC
CGCCGCTGCTGCTGCCGAGGCGGCGCACGACCGCGCGGTGGCGGCGACGCGGAACCACCGCGAGGCCGAGAAGCGCCGCC
GTGAGCGGATCAAGTCGCACCTCGACCGCCTCCGCGCCGTCCTCGCCTGCGACCCCAAGGCATGCAATTTCATTACACAT
CCAAGTCCTGTGCCCTCGTGATTTCCCCCTAATTTAGTTTCTGCGCAACATGC----TCGATGCGAGATCGATCAAGCGA
AATCTTT-ATGGAAGAACTGGATTGCCTGTCATCCATCTGGAATTCTACCGTGGATTGCAGTGGGTAGATGCTATCCCCA
TGAGTAGCTAGCTGTGCTAAGGTTCTCAGCTCAGCTAATCCTTGTGATTAAAGCTGGATTTTGTGTGTGCAAGTAGCACT
AGAATGGAGCCTCTCCTAACTACTAGCTGCTATCATCCTATGAATGACACCGACTAGCTAGGTCAGGTTAGGGCTG--CC
TCGTCTCTTGGCTTGTTCCTCTTCATGATTTGCTTCTTTTGTGCCTAGTACCATGTCTACAATTTTGCATAATTTTTTCA
CCTTCTCCTCTCTACCCTTTTTCATTTCTGATCAATCATAAGCTCTAGGGTTCGTCATCTGAGAGATTGATTGTGCAAAC
AAGATTTCTTGATGAACTTTAGCTCATGAACTGATCTTGTACATGTGTGTTTACAGATAGACAAGGCAACGCTGCTGGCC
AAGGCGGTAGAGAGGGTGCGGGAGCTGAAGCAGCGCATGGCCGGCGTCGTCGGTGAGGCGGGCGCCGCGCCGGCGAGCCA
CCTGTTCCCCACGGAGCACGACGAGATCGTGGTGCTCGCGTCGGGAGGCGGCGCCGGCGGCGCCGCGGCCGTGTTCGAGG
CCTCCCTCTGCTGCGACGACCGCTCCGACCTCCTCCCGGGGCTCATCGACACGCTGCGCGCGCTCCGCCTCCGCACGCTC
CGCGCCGAGATGGCCACCCTCGGCGGCCGCGTCCGCAACGTGCTCGTCCTCGCGCGCGACGCCGGAGGACACGCCGACGA
CGACTACTCCACATCCTCCGAGGACGGCGGCGCCGACTTCCTCAAGGAGGCCCTGAGGGCCCTCGTGGAGAGGCAGGGCG
CGGGCGCCGGCGACCGGCCCAAGAGGAGACGCGTCGCTGACATGAACATGCAAGCGGCTGCTTGATTAATCAGCTA----
GCCGGCCGGCGGCCATAGCTCCTCATGGTATCAGCTGATACGG----TTGCATATGGCGATCGATCTCATGCATGCCATG
GTAATGG------TACTACTACTATACAGCGTGTTAATTTGCTTTCAAAGTAAACTAGTTTTGTGTGATGGTTAATTAGT
TTCAATTCTCCATATATACCACTATATGGCTG----ACTCTCCTTGGTAATGCCAATATGCCATGTATAACTAGGG--AT
ATATATTACTACTCT---TTTACCACTAGGGTTTGCTTGAGCTTTAATCAAATGTTGCTTCAAAGCCAGGGCAAACCCAG
CCCCTAAAATACCAGTTAATGTCAGAATATATGCACAATGCAAAGTTCCAGACTTGA-T-GCCATATGCTACATATACAT
TGGATAACTCTGGAAGCATTTCTGTTTACAAGATCCCACA--AGTCCATTTTTGATCATATATGCTGC------------
-----------ATGCATGCATGCATGTAAGACAAGTCTTCGGATCAAACAAAGATGTTTGCATGCATACATGTAGCAATG
CATGGCAAGACCTAAGATCAAAACAAAGATGTTTGTTCCAACGCATTGCATAGCAATGTAGCAGCATGCTTCCTGTCTGT
CTGGTCTTGTGAAT-----------GAATGAATGTTTGGGGCTTGGACATATTGAATGATCTAGGCATGCATATGCCAGA
TTGATTGTTTGAATATGGAGGAGAGGAAAGGGGAACCAATCAATGATTGCTTGTGTTGGTGCATGCTGCAGTGCACAGTA
GTATGGCTAGCCAGTGTGGCATGCAGCAG-------AGTGAGCAGCTAGCTCTCATGACTACACATGAGTGCATGCATGG
ACTAGTTTGCTAGTACTGGTACTACATGCATGCTGATGCCTGCTGCTGCATGCCCTGTCTGGTCTGGGAAAGGGGGGAAG
GTGGATGAGCTTTTGTTTCTTGCTGGTTTCCTTTTGTAATCTTGCTCCTCTATGGCTTTTTTAG
>chr5A_8
-------AGCAAGTGACCGGCCTGTCCTTCAGTATGTTTGACACTCTGCCACTCACTTACACCAAGTTGAT-------CC
CT-------CCATTGGTCAAGTCGTGGGCTTGGGCCACCCTGTGGCCCAATGAGCCGACAGCCGGCCTACGAGTACACCC
AGGGGCCTGCCATCATCAACCAGTGTGGTTTTTTCTCAA-AACAAAAAAAATCAACCAGCGTGAACC-AATACCCTGGTA
TTAATACCAATCCTTAATTTGGATTTGAAATGAACTTGTTAATATCAGCATGATCTGG-------TCACGCAAGGAAAAC
CGGGGACGCACTTTTCAATTCTCCATAGGTGGATAGAGAGAGACCTACTCGGGTTTCACTTTCACCCAAGTGGCGAAGCT
AGTTCAAGCAGTGGTAGTGCCACAACGCGGCAAGGCAAGGCAAAACATTCCCCCGGGGTGTGGGTGAGCCGGCGTATACG
CTGTTGCACGGGAGTCAAAC----------GACGGATCGCCATCACCGCCACGGCCGTATCTCACCGGAGCGCGACGGCC
GGCGCAAGGTCGGCACCATCGCAGCCGTCGAGCCGCCCCCGCCGGGACATCTCTACCGCCCCTAGAGCCAGCTAGGCCAG
CACCACCTCCCAT-----------CCGTCATCCCTAGCTCACAGGGCTCGCACAGGCACAGCCCTCTATCTCTGACGGGT
CAACAAGCGGGCCCACCCGCCACTCACTCGCCTCACCTCGCCTCGCCCCGTCTCTCTCTAACATTCCCCCCTCT------
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------------------------------------------------------------------CTCTCTCTATCTCT
ATCCGCCCACATGCGCTC----TCCCTCTCTCCTCGAAGCCCCGTTTATTTATTCTCGCCTCTCCTCGTTCCCCCATCCC
ATCCCATCCCATCCCATCCGTCTCTCTCTTCTCCCTTC-CTTCGATTGCAGTCCATGTCCGAGGAACAGTAGTTAGTTCA
CAGCACAACACCACCGCGCCAATTAGTTTGTTAAGTTAGGAGCT-----------TGTGATCAAGGCAGCAAGGCGAGAA
GCTGAAGCT-CTAGCTAGCTCTGGCGGGCATGTTTCCGGCGGAGGCGTCGTTCGCCGGCGCGGAAGCGGCCATGCTGCCG
CCCTTCTTCGTGGGCTCCATGTGGCAGTCGGCGCCAGGCGGCGGCG---CGGCTGCCTTGTCCGAGGAGGACGAGGTAGC
CGCCGCTGCGGCTGCCGAGGCAGCGCACGACCGCGCGGTGGCGGCGACGCGGAACCACCGCGAGGCCGAGAAGCGCCGCC
GCGAGCGGATCAAGTCGCACCTCGACCGCCTCCGCGCCGTCCTCGCCTGCGACCCCAAGGCATGCAATTTCATTACACAT
CTAAGTCCTGTGCCCTCGTGATTTCCCCCTAATTTAGTTTCTGCGCAACATGC----TCGATGCGAGATCGATCAAGCGA
AATCTTT-ATGGAAGAACTGGATTGCGTGTCATGCATCTAGAATTCTACTGTGGATTGCAGTGGCTAGATGCTACCCCCA
TGAGTAGCTAGC--TGCTACGGTTCTCAGCTCAGCTAATCCTTGTGATTAAAGCTGGATTTTGTGTGCGCAAGTAGCACT
AGAATGGAGCCTCTCCTAACTACTAGCTGCTATCATCCTATGAATGACACTGACTAGCTAGGTCAGGTTAGGGCTG--CC
TCGTCTCTTGGCTTGTTCCTCTCCATGATTTGCTTCTTTTGTGCCTAGTACCATGTCTACAATTTTGCATAATTTTT-CA
CCTTCTCCTCTCTACCCTTTTTCATTTCTGATCAATCATACGCTCTAGGGTTCGTCATCTGAGAGATTGATTGTGCAAAC
AAGATTTCTTGATGAACTTTAGCTCATGAACTCATCTTGTACATGTGTGTTTACAGATAGACAAGGCAACGCTGCTGGCC
AAGGCGGTGGAGAGGGTGCGGGAGCTGAAGCAGCGCATGGACGGCGTCGTTGGCGAGGCGG---CGGCGCCGGCGAGCCA
CCTGTTCCCCACGGAGCACGACGAGATCGTGGTGCTCGCGTCGGGAGGCGGCGCCGGCGGCGCGGCGGCCGTGTTTGAGG
CCTCCGTCTGCTGCGACGACCGCTCCGACCTCCTCCCGGGCCTCATCGACACGCTGCGCGCGCTCCGCCTCCGCACGCTC
CGCGCCGAGATGGCCACCCTCGGCGGCCGCGTCCGCAACGTGCTCGTCCTCGCGCGCGACGCCGGAGGACACGCCGACGA
CGACTACTCCACATCCTCCGAGGACGGCGGCGCCGACTTCCTCAAGGAGGCCCTGAGGGCCCTCGTGGAGAGGCAGGGGG
CTGCCGCCGGCGACCGGCCCAAGAGGAGACGCGTCGCCGACATGAACATGCAAGCGGCTGCTTAATGAATCAGCTA----
GCCGGCCGGCGGCCATAGCTCATAGTAT------CTGGTCGATATGATTGCATATGGCGATGGATCTCATGCATGCCATG
GTAATGGTACTACTACTACTACTATACAGCGTGTTAATTTGCTTTCAAGGTTAATTAGTTTTGTGTGATGGTTAATTAGT
TCCAATTCTCCATATATACCACTATATGGCTAGCTAACTCTCCTTGGTGATGCCAATATGCCATGTATAATTAGGGATAT
ATATATTACTACTCT---TTTACCATTAGGGTTTGCTTGAGCTTTAATCAAATGTTGCTTCAAAGCCATGGCAAACCCAG
CCCCTAAAATAACAGTTAATGTCAGAATATATGCACAATGCAAAGTTCCAGACTTGATT-GCCATATGCTACATATACAT
TGGATAACTCTGGAAGCATTTCTGTTTACAAGATCCCACA--AGTCCATTTTTGATCATGTCAGGGCATGCAGCTAGCTA
GCTAGCCTTATATGCATGCATGCATGTAAGACAAGTCTTCGGATCAAACAAAGATGTTTGCATGCATACATGTAGCAATG
CATGGCAAGTCCTAAGATCAAAACAAAGATGGTTGTTCCAACGCATTGCATAGCAATGTAGCAGCATGCTTCCTGTCTGT
CCGGTCTTGTGAATGAATGAAAAAAGAATGAATGTTTGGGGCTTGGACATATTGAATGATCTAGGCATGCATATGCCAGT
TTGATTGTTTGAATATGGAGAAGAGGAAAGGGGAACCAATCAATGATTGCTTGTATTGGTGCATGCTGCAGTGCACAGTA
GTATGGCTAGCCAGTGTGGCATGCAGAGCAGAGAGCAGTGAGCAGCTAGCTCTCATGAC---ACATGAGTGCATGCATGG
ACTAGTTTGCTAGTACTGGTACTACATGCATGCTGATGCCTGCTGCTGCATGCCCTGTCTGGTCTGGGAAAGGGGGGAAG
GTGGATGAGCTTTTGTTTCTTGCTGGTTTCCTTTTGTAATCTTGCTCCTCTATGGCTTTTTT--
>SNPs
SSSSS---------S-------S--------------------------S----S-------S-----------SSS---
--SSSSSSS-------------S---------------------------------------------------------
---------------------------------------S--S----S--------------S----S------------
-----------------------------S-S------------SS------------SSSSSSS---------------
----------------SS-------------------S-----S-----S--------------------------SSSS
--------------------S-------------S------------------------------S--------------
---------S----------SSSSSSSSSS-------------------------------S------------------
---------------------------------------------------------S-S-SSS----------------
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-----------------S---------------------S-S--------------------------------------
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------------------SSSS----------------------------------------------------------
-----------------------------------------------S--------------------------------
-S--------------------------S--------------SSSS---------------S------S--SSS-SSS-
--------------S----------------------------------------------S--S---------------
----------------------------------------------SSS-------------------S-----------
-----------------------------------------S------------------S-------------------
----------------------------------------------------S---------------------------
-----------------------------------------------------SSSS-----------------------
-------S--S---------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------SS--
--------------------------------------------------------------------------------
-S--------------------------------------------------------S---------------------
---S----------------------------------S-----------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------------S--S--S-----S-----------------S----------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------S-----
----------S----------------------------------------S----------------------------
-------S--------------------------------------------------S-------S---------SSSS
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
----SSSSSSS--S-SSS--------------------------------------------------------------
-----------------S-----------------------------------------S--------------------
----------------------------------------SS--------------S--------S--------------
--S----------------------------------------------S------------------------------
-------------S------------------------------------------------------------------
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------------------------------------------------------------------------------S-
------------------------------------S-S-----------S-----------------------------
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>forward_1309
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---------ACCACCGCGGCAATTAGTTA---------------------------------------------------
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>reverse_2548
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-------------------------------------------------------------------AACACGCTGACGA
CGACTAC-------------------------------------------------------------------------
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>forward_1343
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-------------------------------------------AGCTTGACGAGGTGTGATCG-----------------
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>reverse_3177
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--------------------------------------------------------TATGTCAGGCCATGCAGCTAG---
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