>input_sequence_54894
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------------------------------------------------------------ATGGCGGCGATGAGCATGAA
GACGATGATGGCGCTAGCGCCGCTCTTGTGCCTGGCCGTGGCCGTGTCGCTGGGCGGCGTGGAGGCGAGGAAGCACCCCG
GGAAGGAGACCCTGGGGTACTACGAGCTGCGCAGGGGCGAGTTCTCCATGGTGGTCACCAACTGGGGCGCCACCATCCTC
TCCGTCAGGCTCCCCGACAAGAACGGTACTGCTTCCTATTACTACTTCGAATTCTCTCTTTTTCCTCTTAAGATGAGATG
GAGATGGAGATGCTGATGCATGCATCCATGGTTAATTGGCAGGGCGCATCGACGACGTCGTTCTTGGCTACAAGACCATC
GGAGGCTACGTGGTGCGCTGCTTGATCTTGAACTGTTG-CTTAACTCC--------------GGTGGTGCCGCCGACATT
GATT----AGTTTGTTTGATTCTTTCTTTTTTCTTGATTGG----CGCAGAATGACACCACCTACTTCGGCGCGCTGGTG
GGGCGGGTGGCGAACCGGATCGCCGGCGGGCGGTTCACGATCAAGAACCACCCCTACCACACCTACACGAACGACGGCAA
CAACACGCTCCACGGCGGCCACCGCGGGTTCAACCAGGTGTTCTGGTCGGTGCGGGAGCGGGCCACCGGCGCCTTCCCCT
ACATCACCTTCTACTACCGCAGCGGCGACGGCGAGGAGGGCTTCCCGGGCGCGTTGGACGTGCTCGTCACCTACAAGATC
GACGGCGACTACTCGTACAGCGTCACCATGTACGCCCGGCCCGTGGACAAGCCGACGCCCGTGAACCTGGCGCAGCACAC
GTACTGGAACCTGCGCGGGCACGGGCGGGGCACCATCCTCGACCACTCCGTCCAGATCTTCGCGTCCGCCGTCACCCCCG
TCGGCGGCGACCTCATCCCTACGGGCGCCGTCACGCCCGTCGCCGGCACGCCCTTCGACTTCCGCGCCCCGACGGCGCCC
GGCGCGCGCATCGCGGAGGTGGAGGG-----------------------------GGGCTACGACATCAACTACGTCCTG
GACGGGCGCGACGCGGACGGGCAGGGGGTGCGCAAGGTGGCGGTGGTGAGCGAGGCCACGTCCGGGCGGGTGATGGAGCT
GTGGGGCGACCAGCCCGGCGTGCAGTTCTACACCGGCAACTTCCTCAAGGGCGACGAGGGCAAGGGCGGCGCCGTGTACG
AGAAGCACGGAGGGCTGTGCCTGGAGACGCAGGACTTCCCCGACGCCGTGCACAACCCCAAGTTCCCCACCGAGATCTAC
CGCGCGGGCCA---GGTGTACAAGCACTACATGCTCTACAAGTTCTCGATCGCCGGCAAGTAG-----------------
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>chr3B_1_TraesCS3B01G442100
CATTTTATTTTATTTTATTGCCATTTTCCTTGTTGCTCCATAAAAATTATAGTGCTAATAAAAGCTTATTTTGAAAGTTT
TTTACAACACCTTTTTTCTCTCAGACCACCACAAACGTTATATCTACACCAATTTTTGCACTGTCAAAACAAGCATACAA
GTTAGTTACCAAAAAATTAGCATTCTATTTTATTTGTTCGTCATTTTCCTTGATTTTATTGTC-ATCCGGGTGCACATGA
GCTCAGGCTCATAATTGAACTTTTGTTAAAAGGTCTAACAATATTGCACACTAAGATGATGGTTTATAAGGTTGAACTGT
ATTGCACACTAAGATGATGGTTTGTAAGGTCGAACTATATTGCACAAACCGATATTGTCAACAGAATTTCATGTAATAGT
AAAAAAC-ACAGTGCAAACTAAGCATTGACTTCCTGCTAAAAATACAATTGCACCTCTGGCAAAAGTACTCCCTCTGTAA
CTTAATATAAGACGTCCTTGC-AAAAAAAAACTTAACATTAGATGTTTTTTTTACACTGTCATGGACTTTAATAACGTCT
TATAAAACGTCACAGATATAGTACATGGTTTTCAGAGCAATTAGTCGCTTTGGGCAGTGGCTTACATTCCCTACTTGCAT
TGGTGACCTGTGATGTAAACAAAAAAAAAAGCAGTGATTTTCAAGTAGTCGAGGCGGAGATAGCCACGTCCGGCTATGCT
GCAGCAAAATGATCCGAGGGACAGGAAGGCGTTGCGCCGATGGACTAGAG----------------CCTGATACTTGCCG
TTTTTCACGTAACAGTCAAATAGGGTGGTTCGATTCAAGCTGCACGGATCAAGGCGGCGTCTGTTATCCGATCC-ATCCT
CCCCTGTTGACTAGGACAGTCGTTGCTCTCTCTGGAGTGCTAACCATCCTCCTCTATAAATAACGGAGCAAACAAGAGTA
TACGCAGCTGAAAGGCGGCTTCGATCGATCGGTCAGATTAGAAACTTTCGAGAGAGAATCATGGCGGCGATGAGCATGAA
GACGATGATGGCGCTAGCGCCGCTCTTGTGCCTGGCCGTGGCCGTGTCGCTGGGCGGCGTGGAGGCGAGGAAGCACCCCG
GGAAGGAGACCCTGGGGTACTACGAGCTGCGCAGGGGCGAGTTCTCCATGGTGGTCACCAACTGGGGCGCCACCATCCTC
TCCGTCAGGCTCCCCGACAAGAACGGTACTGCTTCCTATTACTACTTCGAATTCTCTCTTTTTCCTCTTAAGATGAGATG
GAGATGGAGATGCTGATGCATGCATCCATGGTTAATTGGCAGGGCGCATCGACGACGTCGTTCTTGGCTACAAGACCATC
GGAGGCTACGTGGTGCGCTGCTTGATCTTGAACTGTTG-CTTAACTCC--------------GGTGGTGCCGCCGACATT
GATT----AGTTTGTTTGATTCTTTCTTTTTTCTTGATTGG----CGCAGAATGACACCACCTACTTCGGCGCGCTGGTG
GGGCGGGTGGCGAACCGGATCGCCGGCGGGCGGTTCACGATCAAGAACCACCCCTACCACACCTACACGAACGACGGCAA
CAACACGCTCCACGGCGGCCACCGCGGGTTCAACCAGGTGTTCTGGTCGGTGCGGGAGCGGGCCACCGGCGCCTTCCCCT
ACATCACCTTCTACTACCGCAGCGGCGACGGCGAGGAGGGCTTCCCGGGCGCGTTGGACGTGCTCGTCACCTACAAGATC
GACGGCGACTACTCGTACAGCGTCACCATGTACGCCCGGCCCGTGGACAAGCCGACGCCCGTGAACCTGGCGCAGCACAC
GTACTGGAACCTGCGCGGGCACGGGCGGGGCACCATCCTCGACCACTCCGTCCAGATCTTCGCGTCCGCCGTCACCCCCG
TCGGCGGCGACCTCATCCCTACGGGCGCCGTCACGCCCGTCGCCGGCACGCCCTTCGACTTCCGCGCCCCGACGGCGCCC
GGCGCGCGCATCGCGGAGGTGGAGGG-----------------------------GGGCTACGACATCAACTACGTCCTG
GACGGGCGCGACGCGGACGGGCAGGGGGTGCGCAAGGTGGCGGTGGTGAGCGAGGCCACGTCCGGGCGGGTGATGGAGCT
GTGGGGCGACCAGCCCGGCGTGCAGTTCTACACCGGCAACTTCCTCAAGGGCGACGAGGGCAAGGGCGGCGCCGTGTACG
AGAAGCACGGAGGGCTGTGCCTGGAGACGCAGGACTTCCCCGACGCCGTGCACAACCCCAAGTTCCCCACCGAGATCTAC
CGCGCGGGCCA---GGTGTACAAGCACTACATGCTCTACAAGTTCTCGATCGCCGGCAAGTAGCCGGGATCCGATCCG--
---GCCGGCAACAAGTTTTCGATGTTAGTACGTAGTGTACTACGTAGCAGTAGCTAGAGAGGATACTTGACTTG---ATC
ATGCATGTTGCCGGTGGAATAAATAAACATTACGTTACGGCCGGTGAGGGCCCCCTCATGTCATGTCTCACTCGCTCGTC
CTCCCGTGCGCTCGGCCCTGCTGCCGATCCGGGGAGCTCGTCATCGTGCCCTGCTTGGCGTCTAGGATTGTGTCCTCTTT
TGTTCAGAACCTCAGATGGGCATCCATATTTTAGAATTCACGTCGATCGTGTCTCGCATATACCTTCGGCCTTACTGT--
-----CTCCGTCTCCCCAGTCTAATCCTAGCAATCTCCCTTACACTGCCACTCCCGCACACTTTGAATTTAAAGCACACT
AGGAGAGGCAAAAGCCGAATACCCATGTGTTGCCACAGAATAATAAAAATATAAACACATCGATCAAATTATTCTTTCAA
TTTTGAAATACGGGTTAAGCATGGTTACATCCGGTTTTCATCATGCAACAATGATTATAAATTCTCTTCCACTTTTCTCG
ACAATCTCTCTATCTCCTTAACCAGCCAAATCACTCGCCACCCAAGAACTTATAATTGGATATAGATCGTCCATTTTTAT
ATAGTATTAATACTCCCTTGTAAAGAAATATTAGTGATCTAAGCGCTTCTATTTCTTTACGGAGTATCAATCAACTTCAC
GCATCCACGTGTCACTATTACATGGTACACAAAGATTGGCACTATTACAAGGTACATAAGGATTGACAAACAGTGGCGGA
GCTTGGGCCTAATCTTTGGAGGGGCAATGGGCTAACACTACTAGGGAAAACCTTATACACAGAATGTTACCAGTAGCGTT
GTACAAAATCATACGCTACTGCTACTTAATAGCAGCGCGCGTAAATAAACCGCGCTACTGCTATGACTTTAGCAGTAGCG
CGTACTAGCAAAAAGCGCTGCTGCTTTGTTTGACATGG
>chr3D_31
------------------------------TGTTGCTCCATAAAAACTATAGTGCTACGAAAAGCTTATTTTGAAAGTTT
TTTAAAGCACCTTTTTT-TCTCAGACCACCACAAATGTTGTTTCTTCACCAATTTTTGCACAGTCAAAACAAGCATACAA
GTTAGTTACCAGAAAATAGATTTCAT------TTTTTTTGTCATTTTCCTTGATTTTATTGTCCATCCGGGTGCACACGA
GCTCAGGCTTAGAATTGAATTTCTGTTAAAAGCACGAACTATATTGCACACTAAGAGGATGGT-----------------
---------------------TTGTAAGGTTGAAATATATTGCACAAACCGATATTGTCAATAGAATTTCATGTAATAGT
AAAAAAATACAGTGCAAACTAAGCATTGAACTCCTGCTAAAAATACAATCGCACCTCTGGCAAAAGTACTCCCTCTGTAA
CTTAATATACGATGTCGTCGCAAAAAAAAAACTTAATATAAGATGTTTTTTT-ACACTGTCATGGACTCTAATAACGTCT
TATAAAATGTTACAGATACATACATGATTG-TCAGAGCAATTAGTCGCTTTTGGCAGTGGCTTGCATTCCCTACGCA---
--GTGACCTGTGATGTGAAC-----AAAAAGCAGTGATTTTCAAGTAGTCGTGGCGGAGATAGCCACGTCCGGCTATGCT
GCAGCAAAATGATCCGAGGGTCAGGAAGGCGTTGCGCCTATGGAGTAGAG----------------CCTGATAGTTGCCG
TTTTTCACGTAACAGTCAAATCTGGTGGTTCGATTCAACCTGCATGGATCAAGGCAGCGTCTGTTATCCGATCC-ATCCT
TCCCTGTTGACTAGGGCAGTCGTTGCTCTCTCTGGAGTGCTAACCACCCTCCTCTATATATACCGGAGGAAACAAGAGTA
TACGCAGCTGAAAGGCGGCA-------------------------TTTTGAGAGAGAATCATGGCGGCGATGAGCATGAA
GACGATGATGGCGTTAGCGCTGCTCCTGTGCCTGGCCGTGGCCGCGTCGCTGGGAGGCGTGGAGGCGAGGAAGCACCCGG
GGAAGGAGACCCTGGGGTACTACGAGCTGCGCCGGGGCGAGTTCTCCATGGTGGTCACCAACTGGGGCGCCACCATCCTC
TCCGTCCGACTCCCCGACAAGAACGGTACTGGCTGCTCTTAGGACGTATTCCCTTGATTATGTTTCTTGTT---------
GAGATGGAGATGCTGATCGATGCATCCATGGTTAATTGGCAGGGCGCATCGACGACGTTGTTCTTGGGTACAAGACCATC
GGAGGTTATGTGGTGCGCTGCTTGATCTTGAACTGTTTACTTAACCTCGGTGGTGGTGGACTGGTGGTGCCGCCGACATT
GATT----CGTTTGTTTGATCCTTTCTTTCTTTTTTTCTTGACGACGCAGAATGACACCACCTACTTCGGCGCGCTGGTG
GGGCGGGTGGCGAACCGGATCGCCGGCGGGCGGTTCACGATCAAGAACCACCCCTACCACACCTACACCAACGACGGCAA
CAACACGCTCCACGGCGGCCACCGCGGGTTCAACCAGGTGTTCTGGTCGGTGCGGGAGCGGGCCACCGGCGCCTTCCCCT
ACATCACCTTCTACTACCGCAGCGGCGACGGCGAGGAGGGCTTCCCGGGCGCCCTGGACGTGCTCGTCACCTACAAGATC
GACGGCGACTACTCGTACAGCGTCACCATGTACGCCCGCCCCGTGGACAAGCCGACGCCCGTGAACCTGGCGCAGCACAC
GTACTGGAACCTGCGCGGGCACGGGCGGGGCACCGTCCTCGACCACTCCGTCCAGATCTTCGCGTCCGCCGTCACCCCCG
TCGGCGGCGACCTCATCCCCACGGGCGCCGTGACGCCCGTCGCCGGCACGCCCTTCGACTTCCGCGCCCCGGCGGCGCCC
GGCGCGCGCATCGCGGAGGTGGAGGG-----------------------------GGGCTACGACATCAACTACGTGCTG
GACGGCCGCGACGCGGACGGGCAGGGGGTGCGCAAGGTGGCGGTGGTGAGCGAGGCCACGTCCGGGCGGGTGATGGAGCT
GTGGGGCGACCAGCCCGGCGTGCAGTTCTACACCGGCAACTTCCTCAAGGGCGACGAGGGCAAGGGCGGCGCCGTGTACG
AGAAGCACGGCGGGCTGTGCCTGGAGACGCAGGACTTCCCCGACGCCGTGCACAACCCCAAGTTCCCCACCGAGATCTAC
CGCGCGGGCCA---GGTGTACAAGCACTACATGCTCTACAAGTTCTCCATCGCCGGCAAGTAGCCGGGATCCGATCCGAT
CCGTCCGGCAACAAGTTTTCGATGTTAGTA------CTAGTACGTAGCAGTAGCTAGAGAGGATACTTGACTTG---ATC
ATGCATGTTGCCGGTGGAATAAATAAACATTACGTTACGGCCGGTGAGGACCCCCTCATGTCATGTCTCAGTCGCTCATC
CTCCCGTGCGCTCGGCCCTGTTGCCGATCCGGGGAGCTCGTCATCGCGCCCTGCTTGGTGTCTAGGATTGTGCCCTCTTT
TGTTCAGAACCTCAGATGGGCATCCATATTTTAGAATTCACATCAATTGTGTCTCGCATATACATTCCGCCTACTATCTC
TGAGACTCCGTCTCCCCAATCTAATCTTACCAACCTCCCTTACACTGCCA--CCCCCACACTTTGAATTTAAAGC-----
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>chr3A_663
AAAACT--------------------------------------------------------------------------
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-------------------------------CAGTGATTTTCAAGTAGTCGAGGCGGAGATAGCCACGTCC---------
---------------GAGGGACAGGAAGGCGTCGCGCCGATGGAGTAGAGGAGCGAACGTTTTGCTCCTGATAGTTGCCG
TTTTTCACGTAACAGTCAAATACGGTGGTTCGACTCAACCTGCACAGATTAACGCGACGTCTGTTATCCGATCCCATCCT
CCCCTGTTGACCAGGACAG----------CTCTCGAGTGCTAACCATGCTCCTCTATAAATACCGGAGCAAACAAGAGTA
CACGCAGCTGGAAGGCGGCTTCGATCGGTTAG--AGATTAGAAACTTTGGAAAGGGAATCATGGCGGCGATGAGCATGAA
GACGATGATGGCGTTAGCGCCGCTCTTGTGCCTGGCCGTGGCCGCGTCGCTGGGCGGCGTGGAGGCGAGGAAGCACCCGG
GGAAGGAGACCCTGGGGTACTACGAGCTGCGCCGGGGCGAGTTCTCCATGGTCGTCACCAACTGGGGCGCCACCATCCTC
TCCGTCAGGCTCCCCGACAAGAACGGTACTGGCTGCTCTTAGTACGTATTCCCTTGATTTTGTTTCTTGTT---------
AAGATGGAGATGCTGATCTATGCATCCATGGTTAATTGGCAGGGCGCATCGACGACGTCGTTCTTGGGTACAAGACCATC
GGAGGTTACGTGGTGCGTTGCTTGATCTTGAACTTTTG-CTTAACCTCGGTGG--------TGGTGGTGCCGCCGACATT
GATTGATTAGTTCGTTTGATCCTTCCCTTTTTCTTGATTGC----CGTAGAATGACACCACCTACTTCGGCGCGCTGGTG
GGGCGGGTGGCGAACCGGATCGCCGGCGGGCGGTTCACGATCAAGAACCACCCCTACCACACCTACACCAACGACGGCAA
CAACACGCTCCACGGCGGCCACCGCGGCTTCAACCAGGTGTTCTGGTCGGTGCGGGAGCGGGCCACCGGCGCCTTCCCCT
ACATCACCTTCTACTACCGCAGCGGCGACGGCGAGGAGGGCTTCCCGGGCGCGCTGGACGTGCTCGTCACCTACAAGATC
GACGGCGACTGCTCGTACAGCGTCACCATGTACGCCCGCCCCGTGGACAAGCCGACGCCCGTGAACCTGGCGCAGCACAC
GTACTGGAACCTGCGCGGGCACGGGCGGGGCACCGTCCTGGACCACTCCGTCCAGATCTTCGCGTCCGCCGTCACCCCCG
TCGGCGGCGACCTCATCCCCACGAGCGCCGTGACGCCCGTCGCCGGCACGCCCTTCGACTTCCGCGCCCCGGCGGCGCCC
GGCGCGCGCATCGCGGAGGTGGAGGG-----------------------------CGGCTACGACATCAACTACGTGCTG
GACGGGCGCGACGCGGACGGGCAGGGGGTGCGCAAGGTGGCGGTGGTGAGCGAGGCCACGTCCGGGCGGGTGATGGAGCT
GTGGGGCGACCAGCCCGGCGTGCAGTTCTACACGGGAAACTTCCTCAAGGGCGACGAGGGCAAGGGAGGCGCCGTGTACG
AGAAGCACGGCGGGCTGTGCCTGGAGACGCAGGACTTCCCCGACGCCGTGCACAACCCCAAGTTCCCCACCGAGATCTAC
CGCGCGGGCCA---GGTGTACAAGCACTACATGCTCTACAAGTTCTCGATCGCCGGCAAGTAGCCGGGATCCGATCCG-T
CCGGCCGGCAACAAGTTTTTTATGTTAGTA------GTAGTACGTAGCAGTAGCTAGAGAGGATACTTTGACTTGGAATC
ATGCATGTTGCCGGTGGAATGAATAAACATTACGTTACGGCCGGTGAGGCT-CCCTCATGTCATGTCTCGCTCGCTCGTC
CTCCCGTGTGCTCGGCCTTGTTGCCGATTCGGGGAGCTCGTCATCGCGCCCTGCTTGGTGTCTAGGACCGTGTCCTCCTC
TGTTCAG------AGATGGGCATCCATATTTTAGAATGCAACGTC-----------------------------------
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>chr2B_1744
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--------------------------CATGAACGCGACGGCGCTGGACAAGGCCACCCCGGTGAACCTGGCGCAGCACAC
GTACTGGAACCTGGGCGGGGAGGGCAGCGGCGACGTCCTGGGCAACACGGTCCAGCTCTTCGCGTCCCGGTACACGCCCG
TGGACGCGACGCTCATCCCCACGGGGCAGCTGGCGCCCGTGGCCGGCACGCCCTATGACCTCCTGGCGCCGAC--CTCCG
TGCGCGAGCACCTCCGCCAGGTCGTGGGCGGCAGCAGCAACGGCAGCACCATCTACGGCTACGACATCAACTACGTGGTC
GACGGG---------GACGCGCGCGCGCTGCGCAAGGTGGCGGCCGTCCGGGACGGCGCGTCCGGGCGCGCGCTGGAGCT
GTGGGCGGACCAGCCCGGGGTGCAGTTCTACACCGGCAACTTCCTCCAGGACGTCAAGGGGAAGGGCGGCAAGACGTACG
GGCAGTACGGCGCGCTGTGCCTCGAGACGCAGGGGTTCCCCGACGCCGTGAACCACCCCGACTTCCC-------------
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>chr2A_1744
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--------------------------CATGAACGCGACGGCGCTGGACAAGGCCACGCCGGTGAACCTGGCGCAGCACAC
GTACTGGAACCTGGGCGGGGAGGGCAGCGGCGACGTCCTGGGCAACACGGTCCAGCTCTTCGCGGCCCGGTACACGCCCG
TGGACGCCACGCTCATCCCGACGGGGCAGCTGGCGCCCGTGGCCGGCACGCCCTACGACCTCCGGGCGCCGAC--CGCCG
TGCGCGAGCACCTCCGCCAGGTCGTCGGCGGCAGCAGCAACGGCAGCACCATCTACGGCTACGACATCAACTACGTGGTC
GACGGC---------GACGCGCGCGCGCTGCGCAAGGTGGCGGCCGTCCGGGACGGCGCGTCCGGGCGCGCGCTGGAGCT
GTGGGCGGACCAGCCCGGCGTGCAGTTCTACACCGGCAACTTCCTCCAGGACGTCAAGGGGAAGGGCGGCAGCGTGTACG
GGCAGTACGGCGCGCTGTGCCTCGAGACGCAGGGGTTCCCCGACGCCGTCAACCACCCGGAGTTCCCGTCGCAGATCGTG
AGGCCTGGCCAGGCGGCGTACAAGCATGACATGGTGTTCAAGTTCTC---------------------------------
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>chr2D_1744
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--------------------------CATGAACGCGACGGCGCTGGACAAGGCCACCCCGGTGAACCTGGCGCAGCACAC
GTACTGGAACCTGGGCGGCCAGGGCAGCGGCGACGTCCTGGGCAACACGGTCCAGCTGTTCGCGTCCCAGTACACGCCCG
TGGACGCCACGCTCATCCCGACGGGGCAGCTGGCGCCCGTGGCCGGCACGCCCTACGACCTCCGGGCGCCCAC--CGCCG
TGCGCGAGCACCTCCGCCAGGTCGTGGGCGGCAGCAGCAACGGCAGCACCATCTACGGCTACGACATCAACTACGTGGTC
GACGGG---------GACGCGCGCGCGCTGCGCAAGGTGGCGGCCGTCCGGGACGGCGCGTCCGGGCGCGCGCTGGAGCT
GTGGGCGGACCAGCCCGGCGTGCAGTTCTACACCGGCAACTTCCTCCAGGACGTCAAGGGGAAGGGCGGCAGGGTGTACG
GGCAGTACGGCGCGCTGTGCCTCGAGACGCAGGGGTTCCCCGACGCCGTGAACCACCCCGACTTCCC-------------
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>SNPs
S-SSS-SSSSSSSSSSSSSSSSSSSSSSSS----------------S----------SS---------------------
----S-S----------S-----------------S---S-S---S---------------S------------------
-----------S-----SSSSS-SS-SSSSSS---S--S--------------------------------------S--
---------S-S-------S--S---------SS-S---S----------------S------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS---------S---S--------------------------S------------------
------S----------------------SS------------------S------------------------------
---------S--S---S-S-----------------S--S------------S---------------S-----------
-------S--S-------S-SSSSSSSS-SS--------------------S-----------S----------SSSSSS
SS--------------S---SSSSS-------------------------------------------------------
--------------------------------------------S----------------------------S------
----------------------S---------------S-----------------------------------------
--------------------------------------------------------------S-----------------
---------------------------S-SS-SS--------------S-------------------------------
-------------S------------------------------S---------------------------------S-
--------------------------------S-----------------------------------------------
-------------------------------SS-S--S---S---S-SSSSSSS-SSS---S-SSSS-SSSSSSSSSSSS
-----------------SS------------------------------------------------S------------
-----S---------------------------------------SS---------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------S-----------
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-----------------------------------------------------S--------------------------
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----------------------------------S---------------------------------------------
-------------------S-----------S------------------------------------------------
----------------------------------------------------------------------------S---
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----------S---------------------------------------------------------------------
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------------------------------SSSSSS---S----------------------------------------
-------------------------------------------------S------------------------------
--------------------S-------------------------S-----------S---------------------
-----------------------------------------S--S--S---------------S---S----SSSSSS--
------------------S-------S--S---S----------------SS---S-------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_238
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----------------------------------------------------------ATTGTCATCCGGGTGCACAT--
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>reverse_1279
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------------------------------------------------------------------------------TG
GAGATGGAGATGCTGATGC-------------------------------------------------------------
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>forward_1233
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-------------CCGACAAGAACGGTACTGCT-----------------------------------------------
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>reverse_3212
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-----------ATCTTTGGAGGGGCAATGGG-------------------------------------------------
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