>input_sequence_54889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ATGAATCGGACTCCA-----------------------GCCCACCGTAGCATGTGGGAATTGATCAACCCCAAC
AAGTTTGAGGAATTGAGTGAGTACATCTTCTTTTCTTGCTCTCGCTGCATGTGTTAC-----------------------
-----------------------------------------------------------TACTTGTGTAGTAGTACCAAC
TCTGCACTCAACTCTATGTCTATTAGTATTGGATTTGGCGGATTAGTCTTTTCTTCATGTCAAGT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCCTATGGCTACATGTTAATTACATTGATATAAATA
ATGAAATCAGATGTTTACCTTTTCAG--TCTGCGTTAGATTCCTAACGCACTTGACTTGGCTTCATGCAGCATCACTGAC
TTCCATGCTCTTTACAAGCTGCACACCTGGACGCATGCCATGGTACGCTGTTAACCAGCTGAGCTTGCAAATCTACTCAA
TCAAGATTACAGAAATTACTGATCTCGAGTGGCCATTGGTGGTTTATGGAATTATTGCCGCCCGAGACACCGTGGACAGC
TGCCGAAACCCTCTGTTCCTTTGTCCAAGGGATGAGTGGCAGTGCATCACCCAACAGGTATGCATGGTATAATGTTTGTT
CTTCTTGTTGTTGCTTCGTTGATCAGTAAGTGACAAATGATAATGGTTGTAGGATCCCTTTTTGCGCTTGACTGGCCCAG
CTCGTGCGATTTTGTGTGAAGACCCCGTTTCTTTTGAAATCCAACTAAAATTAAAGGGCAGAGCAGAGTCTGAAGATAGA
GTATTCATCAGTGATATATTGTCTCATGATGCGAATGCTGGTGATCGGTTTTCTACCCTGAATGTAAGCAACCACTTTTG
CAAGATGGAGCTTTGCGTTGAGCGATTTAAGGGGTCAGTCCAGGCAACTATCTTGGATGTTCATGTCGTTGAACAAGGAT
CACCGCCTTTTCCACATGGCGGCCGAGTTGTCTGCTCCTCGCTGCCTCGTGGTGTACATGAAGTCAATTGGCCCTCATCT
AGGCAAATTGTGTTGCTTGATTCAGTTGATGGGAGAAGGTTTATAGATGAGCATGGTTATATTGATCTGCAGAGAAATGT
TGTTTCTGCTGAATTAAGAGGAGAATTGATTGTCTGTATCAAGGCCTACTCACCATGTGGTGACATATGCGGTGATGTTC
ATTTTACACCCAAGAAGTGCAATTTCAGTAAAGAGAGAATTGTCCTTGGGGACATGGAGGTCGAGGTTACAGTGGCTTGG
TCTCTAATGGTTGACGATGATGTGACTATCCAGGCAAGTGGCCATGTGGACCCATTTGGGATGTGCCCACCTCTACACCC
CTCTCTGTTGAAAGAAATGGACTGGTCTGTTTATGCTTAG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr2A_1_TraesCS2A01G499300
CATCCCTTGTCTTTTCTGCTTTGGGCACCATGTTCACGTCTGTCTGCGTTCGTGTCATGTGTTGTATCCCTATCTGTACT
TATTCTACTCCTTCTATCAATGCAATGATACGCAAACTTTGCGTATTCGCGA-------AAGGAAAACTCCACCCAACCA
CATCATCCACACCCTCTGTAATTTGCATCACTGTAACTCGCGACCAAAGACGAAGGAACTAGAGCAGCGCATCCGCTATG
AGATCAGGGCCAATGTCGCCG---CCGTCGGTTCTGGAGTTGGTTGGCCGGCCACCGCCGTCTTGCCTCGCGGGGAAGGA
AGAATC--GAGATTAGGCAAAGGATTGTGGATAAGTTGAGAAGAAGTTATACGGATGCTTTAAGATTCACACTGCCACGT
GTCTTTTGATGGAATAGGTCTACAGATCGTTAGCGTGCGTCCAGGTCGTATATGATTTTTTTT---------C-------
-CGTGTGTGTATGCGTATCCATGTAGGATACCTATACCTAGTCGGTTTGTGTTAGGCCTAGCTTAGTATCGATCCTGTT-
GGCGC--TAGTACGTTCCACCGACAGAGCCGATCGCAAGTTAAAGCAAAGCCCAGGCCAACGTGGTATCGCTAATCAATC
CACCTGCTAGCTTGTGTGCTTGGCTTGTTGAGGCTAGGCTATA-----GCTTGCACGTACGGGTTGCTCC-GGGTGGATT
TGTTCTGGCGTTCAAAAACCAACAAAACTAA--AGCGGAGATGATCGGCCGCCACGCCGAAGAGGAGGAGGAGG------
AGGTGTCTGGGATGCCCCGAAAATCGCTTGACGAGTCGCGCATGGATCATCTCCAAGACGAGATGCAGAAATTGCTGCAA
TCTTCATCGACCAACGAAAGGGATGCAGTGAGATCCTGGCTCAAGTCTGAGCGCTGCCTGCGCGCGCTCTCCCAGCTACA
GTCTATCTCCGCACGCATCGATGGTCTCCGGAGGTCGAACCCAGGCCTCGATCATGACCTGAAATTGATGCTGAGACCTT
CCAAGCATGAATCGGACTCCA-----------------------GCCCACCGTAGCATGTGGGAATTGATCAACCCCAAC
AAGTTTGAGGAATTGAGTGAGTACATCTTCTTTTCTTGCTCTCGCTGCATGTGTTAC-----------------------
-----------------------------------------------------------TACTTGTGTAGTAGTACCAAC
TCTGCACTCAACTCTATGTCTATTAGTATTGGATTTGGCGGATTAGTCTTTTCTTCATGTCAAGT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCCTATGGCTACATGTTAATTACATTGATATAAATA
ATGAAATCAGATGTTTACCTTTTCAG--TCTGCGTTAGATTCCTAACGCACTTGACTTGGCTTCATGCAGCATCACTGAC
TTCCATGCTCTTTACAAGCTGCACACCTGGACGCATGCCATGGTACGCTGTTAACCAGCTGAGCTTGCAAATCTACTCAA
TCAAGATTACAGAAATTACTGATCTCGAGTGGCCATTGGTGGTTTATGGAATTATTGCCGCCCGAGACACCGTGGACAGC
TGCCGAAACCCTCTGTTCCTTTGTCCAAGGGATGAGTGGCAGTGCATCACCCAACAGGTATGCATGGTATAATGTTTGTT
CTTCTTGTTGTTGCTTCGTTGATCAGTAAGTGACAAATGATAATGGTTGTAGGATCCCTTTTTGCGCTTGACTGGCCCAG
CTCGTGCGATTTTGTGTGAAGACCCCGTTTCTTTTGAAATCCAACTAAAATTAAAGGGCAGAGCAGAGTCTGAAGATAGA
GTATTCATCAGTGATATATTGTCTCATGATGCGAATGCTGGTGATCGGTTTTCTACCCTGAATGTAAGCAACCACTTTTG
CAAGATGGAGCTTTGCGTTGAGCGATTTAAGGGGTCAGTCCAGGCAACTATCTTGGATGTTCATGTCGTTGAACAAGGAT
CACCGCCTTTTCCACATGGCGGCCGAGTTGTCTGCTCCTCGCTGCCTCGTGGTGTACATGAAGTCAATTGGCCCTCATCT
AGGCAAATTGTGTTGCTTGATTCAGTTGATGGGAGAAGGTTTATAGATGAGCATGGTTATATTGATCTGCAGAGAAATGT
TGTTTCTGCTGAATTAAGAGGAGAATTGATTGTCTGTATCAAGGCCTACTCACCATGTGGTGACATATGCGGTGATGTTC
ATTTTACACCCAAGAAGTGCAATTTCAGTAAAGAGAGAATTGTCCTTGGGGACATGGAGGTCGAGGTTACAGTGGCTTGG
TCTCTAATGGTTGACGATGATGTGACTATCCAGGCAAGTGGCCATGTGGACCCATTTGGGATGTGCCCACCTCTACACCC
CTCTCTGTTGAAAGAAATGGACTGGTCTGTTTATGCTTAGTCTTTGGTAGGATCTGTATTATGTTATGTTCAGAGAAATG
AATGGATATGTCTAGTCTTTGGTATGATCTGTGTTATGTTATCTGAACCTCTGGTCTGCAACTAGTACGTTTTTCTGGAG
ACAAATAACTGCCCTGCTTATGCACATACGATTGTTATATCTTAACTGCTTTATTGTCTGTTGGAGTTGTCTGTTTGTTA
TTTCTGCCTATTAATGTTGCTAGAATTGATGCTGATTTGTCTCTGCCATTGTGTTCCAGTTGAAATAACTCTCACAAGAC
CCTTGTTATTCTACTCTA----------TTGTATCATGAATAATTACATTCCTCGGCTGTTAGAGTTGTGTCGAATATTG
TCTACAAGGTAGGTTACAGTTCGACTTGTAGTTGTATTGTGTTTAGATAGGATATGGAGTCAGATCCAAGTAGGACACTT
GTATCTTAGGCCTCTCATATATAGCGGGGTAGACACACGATATAACCTATGCCAACATGATAGCACAGGAACGCAGGGGA
AAACGGCGGCATGTGCCGGCGTCCAGGGTGACCGGGTGCGGTATTGTAGTGGTGTCATGGGGAGGATCGCCCGTAGTCAG
GCCCCGGAGATGTCGGTGAACCTCGTTAACAAATCTCGGTGTCGTGCTCGTGTGATTGCATGGTCCTCGGATGATAACGG
CATGTCTCGGATTTCTTCTAACATCGGCCACCTTGACGTGCTTGTTGTTAATCAGTCATGCTACACACGTAATTCAGTTG
TGTTAGACAAATTTTCTAGTGGTAATCCAGTCATCTAAACAGGCCACTTGGGCGGATCCATGGCGTGCTGCAAGGTTCCC
GTGCTGCCGCCGAACGCGACTCGTCGCTGGTGCTTGGGTTGGATCTATGCATGACGTTTACAAGTGCCGGTGCTGTCGCT
GGGGGGGTTGGGTTTGACAGGGAGTGCAAGAGAGCTCGTGTTGCAAAGCGCCGAGCACAACACGTGCATTGCTGCAAAGG
CTGCCGCACC
>chr2D_1
CATCCCTTGTCTTTTCTGCTCTGGGCACCATGTTCACGCCTGTCTGCGTTCGTGTCATGTGTTGTATCCCTATTTGTACT
TATTCTGCTCCTTCTATCAATGCAATGATACGCAAACTTTGCGTATTCGCGG-------AAAAAAAACTCCACCTAACCA
CATCATCCACACCCTCTGTAATTTGCATCACCGTAACTCGCGACCAAAGACGAAGGAACTGGAGCAGCGCATCCGCTATG
AGATCAGGGCCAATGTCGCCGCCGCCGTCGGTTCTGGAGTTGGTTGGCCGGCCACCGCCGTCTTGCCTCGCGGGGAAGGA
AGAATC--GAGATTAGGCAAGGGATTGTGGATAAGTTGAGAAGAAGTTATACGGATGCTTTAAGATTCACACTGCCACGT
GTCTTTTGATGGAATAGGTCTACAGATCGTTAGCGTGAGTCCAGGTCGTATATGATTTTTTTT---------CTTTTTTC
CCGTGTGTGTATGCGTATCCATGTAGGATACCTATACCTAGTCGGTTTGTGTTAGGCCTAGCTTAGTATCGATCCTGTT-
GGCGCTATAGTACGTTCCGCCGACAGAGCCGATCGCAAGTTAAAGCA-AGTCCAGGCCAACGTGGTATTGTTAATCAATC
CACCTGCTAGCTTGTGCGCTTGTTGAGGC------------TAGGCTAGCTTGCACGTACGGGGTTGCTCAGGGTGGATT
TGTTCTAGCGTTCAAAAACCAACAAAACTATATAGCGGAGATGATCGGTCGCCACGCCGAAGAGGAGGAG---------C
AGGTGTCTGGGATGCCCCGAAAATCACTTGACGAGTCGCGCATGGATCATCTCCAAGACGAGATGCAGAAATTGCTGCGA
TCTTCCTCGACCAACGAGAGGGACGCAGTGAGATCCTGGCTCAAGTCCGAGCGCTGCCTGAGCGCGCTCTCCCAGCTACA
GTCTATCTCCGCACGCATCGATGGTCTCCGCAGGTCGAACCCAGGCCTCGATCATGAACTGAAATTGAAGCTGAGATCTT
CCAAACATGAATCAGACTCCGCGGAGGAGGAGCGGGAGTTCGCTGCCCGCCGTAGCATGTGGGAATTGATCAACGCCAAC
AAGTTTGAAGAATTGAGTGAGTACA---TCTTTTCTTGCTCTCGCTGCATGTGTTACTACTCCCTCCGTCTCAAAATGAG
TGTCTTGACCTTAGTACAACTTTATACTAGTTAAGACACTTATTTTGAGACGGAGAGAGTACTTGTGTAGTAGTACCAAC
TCTGCACTCAACTCT--GTCTATTAGTATTGGATTCGGCGGATTAGTCTTTTCTTTATGA--------------------
-----CACAATGTGTAGT--TTTAGGACTTCACTATCACACGACCTTTTTCCTTTGAGTGATGATTAGTTAAGTTTGACT
TTTTTTTTTGCGGGAGAAGTTTGACTTGTTATTATCACTTCAACATAG--------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATAGATAGCTGTCCAGAGAATGTTTTGCTACAACACA
AGCAGATTGATACATTTTTAGAAAAATAATATCTAAATTGCTTCTTCTTTTTTCCTCCTGGAAAAATAATATTTACAACT
ATTTTGCAGTTGAATTGGTAAATAATAGCCGTGGATGCTTATGAGCCTATGGCTACATGTTAATTACATTGACATA---A
ATGAAATCAGATGTTTACTTTTTCAG--TCTGCGTTAGATTCCTAACGCACTTGACTTGGCTTCATGCAGCATCACTAAC
TTCCATGCTCTTTACAAGCTGCACACCTGGACGCATGCCATGGTACGCTGTTAACCGGCTGAGCTTGCAAATCTACTCAA
TCAAGATTGCAGAAATTACTGATCTCGAGTGGCCACTAGTGATTTATGGAATTATTGCCGCCCGAGACACTGTGGACAGC
TGCCGAAACCCTCTGTTCCTTTGTCCAAGGGATGAGTGGCAATGCATCACCCAACAGGTATGCATGGTATAATGTTTGTT
CT---TGTTGTTGCTTCGTTGATCAGGAAGTGACAAATGATAATGATTGTAGGATCCCTTTTTGCGCTTGACTGGGCCCA
CTCGTGCAATTTTGTGTGAAGACCCTGTTTCTTTTGAAATCCAACTAAAATTAAAGGGAAGAACAGATTCTGAAGATAGA
GTATTCATCAGCGATATATTATCTCATGATGCGAATGCTGGTGATCGGTTTTCTACCCTGAATGTAAGCAACCACTTTTG
CAAGATGGAGCTTTGCGTTGAGCGATTTAAGGGGTCAGTCCAGGCAACTATCTTGGATGTTCATGTCGTCGAACATGGAT
CACCGCCTTTTCCACATGGCGGCCGAGTTGTCTGCTCCTCGCTGCCTCGTGGTCTACATGAAGTCAATTGGCCTTCATCT
AGGCAAATTGTGTTGCTTCATTCAGTTGATGGGAGAAGGTTTACAAGTGAGCATGGTTATATTGATCTGCAGAGGAATGT
TGTTTCTGCTGAATTAAGAGGAGAATTGATTGTCTGTATCAAGGCCTACTCACCATGTGGTGACATATGCGGTGATGTTC
ATTTTACACCCAAGAAGTGCAATTTCAGTAAAGAGAGAATTGTCCTTGGGGACATGGAGGTCGAGGTTACAGTGGCTTGG
TCTCTAATGGTTGACGATGATGTGACTATCCAGGCAAGTGGCCATGTGGACCCATTTGGGATGTGCCCACCTCTACGCCC
CTCTCTGTTGAAAGAAATGGATTGGTCTATTTAT---TAGTCTTCGATAGGATCTGTATTATGTTAT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr2B_1
CATCCCTTATCTTTTCTGCTCTAGGCACTATGTTCACGCCTGTCTACGTTCGTGCCATGTATTGTATCCCTATCTGTATT
TATTCTACTCCTTCTATCAATGCAATGATATGCAAACTTTGCGTTGCATATTCGTCAAAAAAAAAAACTCCACCCAACCA
CATCATCCACACCCTCTGTAATCTGCATCACC------------------------------------------------
------GGGCCAATGTCGCCG---CGGTCGGTTCTGGAGTTGGTTGGCCGGCCACCGCCGTCTTGTCTCGCGGGGAAGGA
AGAATAGAGAGATTAGGCAAAGGATTGTGGATAAGTTGAGAAGAAGTTATACGGATGCTTTAAGATTCACACTGGCACGT
GTCTTTCGATGGAATAGGTCTAAAGATAGTTAGCGTGAGTCCAGGTCACATATGTTTTTTTTTTCCTTTTTCC-------
-CGTGTGTGTGTGCGTATCCATGTAGGATACCTATACCTAGTCGGTTTGTGTTAGGCCTAGCTTAGTATCGATCCTGTTT
GGCGC--TAGTACGTTCCGCCGACAGAGCCGATCGCAAGTTAAAGCA-AGCCCAGGCCAACGTGGCATCGCTAATCAATC
CACCTGCTAGCTTGTGTTCTTGTTGAGGC------------TA-----GCTTGCAAGTGCGGGTTGCTCC-GGGTGGATT
TGTTCTAGCGTTCAAAAACCAACAAAACTAA--AGCGGAGATGATCGGTCGCCACGCCGAAGAGGAGGAGGAGCAGGAGC
AGGTGTATGGGATGCCCCAAAAATCACTTGACGAGTCGCACATGGATCATCTCCAAGACGAGATGAAGAAATTGCTGCGA
TCTTCCTCGACCAACGAGAGGGATGCAGTGAGATCCTGGCTCAAGTCTGAGCGCTGCCTGCGCGCACTCTCCCAGCTACA
GTCTATCTCCGCACGCATCGATGATCTCCGCAGGTCGAACCCAGGCCTCGATCATGAACTGAAATTGATGCTGAGACCTT
CTAAGCATGAATCAGACTCCGCGGAGGAGGAGGGGCTGTTCGCTGCCCGCCGTAGCATGTGGGAATTGATCAACGCCAAC
AAGTTTGAGGAATTGAGTGAGTACA---TCTTTTCTTGCTCTCGCCGCATGTGTTAC-----------------------
-----------------------------------------------------------TACTTGTGTAGTTGTACCAAC
TCTGCACTCAACTCTATGTCTATTAGTATTGGATTTGGCGGATTAGTCTTTTCTTTATGCCTAATTAGTTGCTTATAAGT
AGTAGCACAATGTGTAGCACTTTGGGGCTTCAGTATCACACAACCTTTTTCCTTGTGGTGAGAATCTTGCTTTCCAGATG
TACTTCTCCTTATTAGTCTTGCTGTTCATTAGCAGGGGTTAATCCCTTGCTACTTTCTAAGACTTGTATTCAGCTGTAGT
TGCTGAGTTCTGCTGTTCTCTCCTTTATAATACTTTGCAGATCTTGTAACTCTTGATGTACTTTGACTATGAGCTGAATA
TATTGGCACCTGTTGGTGCCTTGCTTTGTTCAAAAAAAAAAACATAGGTAGCTGTTCAGAGAATGTTTTGCTACAACACG
AGGAGATTGATACATGTGGAGAAAAATATAT-----------------------------------------------CT
ATTTTGCAGTCTAATTGATAAATAATACTCGTGGATGCTTATGAGCCTATGGCTACATGTTA----CATTGATGTG---A
ACGAAATCAGATGTTACCTCTTCTAATCTCTGCGTTACATTCCTAACGCACTTGACTTGGCTTCATGCAGCATCACTGAC
TTCCATGCTCTTTACAAGCTGCACACCTGGACGCATGCCATGGTACGCTGTTGACCAACTGAGCTTGCAGATCTACTCAA
TCAAGATTACAGAAATTACTGATCTCGAGTGGCCACTAGTGGTTTATGGAATTGTTGCAGCCCGAGACACCGTGGACAGC
TGCCGAAACCCTCTGTTCCTTTGTCCAAGAGATGAGTGGCAGTGCATCACTCAACAGGTATGCATGGTATAATTTTTGTT
CTTGTTGTTGTTGATTCGTTGATCAGTAAGTGACAAATGACAATGGTTGTAGGATCCCTTTTTGCGCTTGACTGGCCCAA
CTCGTGCAATTTTGTGTGAAGACACTGTTTCTTTTGAAATCCAACTAAAATTAAAGGGCAGAGCAGAGTCTGAAGATAGA
ACATTCATCAGTGATATATTGTCTCATGATGCGAATGCTGGTGGTCGGTTTTCTACCCTGAATGTCAGCAACCACTTTTG
CAAGATGGAGCTTTGCGTTGAGCGATTTAAGGGGTCAGTCCAGGCAACTATCTTGGATGTTCATATCGTTGAACATGGAT
CACCGCCTTTTCCACATGGCGGCCGAGTTGTCTGCTCCTCGCTGCCTCGTGGTGTACATGAAGTCAATTGGCCCTCATCT
AGGCAAATTGTGTTGCTTGATTCAGCTGATGGGAGAAGGTTTACAGATGAGCATGGTTATATTGATCTGCAGAGGAATGT
TGTTTCTGCTGAATTAAGAGGAGAATTGATTGTTTGTATCAAGGCCTACTCGTCATGTGGTGACATATGTGGTGATGTTC
ATTTTACACCCAAGAAGTGCAATTTTAGTAAAGAGAGAATTGTCCTTGGGGAGATGGAGGTCGAGGTTACAGTGGCTTGG
TCTCTAATGGTTGACGATGATGTGACTATCCAGGCAAGTGGCCATGTGGACCCATTTGGGATGTGTCCAGCTCTACACCC
CTCTCTGTTGAGAGAAATGGATTGGTCTGTTTAT---TAGTCTTTGGTAGGATTTGTATTATGTTATCTAAACCTCTGGC
CTATGTTGCATTCTAAGCTT---------------------------------GTCTGCAACTAGCACTTCTATCTGGAG
ACAAATAACTGGCCTACTTATGCACGTACGGTTGTTATATCTTAACTGCTTTATTGTTTCTTGGAGTTGTTTGCTTGTTA
TTTCTGCCAATTGATGTTGCTAGAATTGATGCTGGTTTCTCCCTGCGATTGTGGTTCAGTTGAAAGAACTCTCACAAGAC
CCTTGTTATTCTACTCTACTGTCATTTTTTGTATCGTGAATAATTACATTTCTCGGC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CACCTTGACGTGCTTGTTGTTAATCAGTCATGCTACACACGTAGTTCGGCCG
TGTCATACAAATTGTCTAGTGTTACTCCAGTCATCTAAACGGGCCACT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>SNPs
--------------------S-----------------S-----------------------------------------
---------------------------------------------------S---------SS-----------------
-------------------------------S----------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
------------------S----------------------------S--------------------------------
----------------------SSSS-SSSSSSSSSSSSSS---------------------------------------
------S-----------------------------------------S------------------------S------
-------------------------S----------------------------------------------------S-
-----S-----------S--------------------------------------------------------------
------------------------------S--------------------------S----------------------
-------------S------S---------------------------S-------------------------S-----
-------------------------SSS----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S---S-S-S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------SSS-
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-S------------------------------------------
--------------------------------------------------------------------------------
---S---------------------------------------------------------------------------S
-------S-----------------S------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S------------SSS------------------------------S-SS-SSSSSSSS
SSSS-S-SSS-SSSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S--S-S-S-------
-----------S---S---------S----S--------------------------S-S----------S--S------
--------S---S---------------------S---S--S----S------S-S---------S--------------
-----------------------------------S--------------S------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------S---S-SS-
---S-S-------S-------S--S---------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GTGTGCTTGGCTTGTTGAGG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2240
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
CTCGTGCGATTTTGTGTGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGCTTGTTGAGGCTAGGCTA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGGAT
CACCGCCTTTTCCAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1089
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATGAATCGGACTCCAGCCCA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_3628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CCACCTTGACGTGCTTGTTG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
