>input_sequence_54849
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-------------------------------------------ATGAATGTAGACTGTAATACGTATTCCAGCAACAGCA
ATACGGTCAGAGATGCATTGTGCTTTTTCCTTGACGAAGAAATGGGTCACAAGCTCGGATTTGTGCAGTATCCTCAGAAC
TATGACAACATGACCAAGAATAATATATATGGTAACTCTCTCCATGTCATCAATGAAGTCAGCATCATTAAACTATAACC
TGAGTACC-ATTGTCATGTTCTCCAT----AA-----TATTTCCACAAACATAGCTACTCGATTT--AAAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGACCTCTGTATGTTGGCACTGGATGTTTCCATAGAAGGGAGATCCTTTGTGGCAGGAG
GTTCACCAAAGAATATCAAGAAGACTGGAACAGAGGGATCAAGGGCAGAATACAAGATACTAGCATAGATGAGATTGAAG
AGAAAGCAAAGTCTTTAGCAACCTGCACATCTGAACATGACACGCAATGGGGAGATGAGATTGGGTTGAAATATAATTGC
CCCATGGAGGATGTAATCACTGGATTGGCGATACATTGCAGAGGATGGGAGTCAGTCTACAACAATCCTACAAGACCAGC
GTTTACGGGTCTAGGTCCAACGACACTTGCTCAGACACTATTGCAACACAAGAGATGGAGTGAGGGTAGTTTCTCAATCT
TTCTATCAAAATACTGCCCCTTCTTGTTTGGGCATGGAAAAACCAAGTTAAGACATCAAATGAGCTACTGCATCTATGGG
CTATGGGCACCCAATTCACTCCCTACCCTGTATTATGTTATCATCCCTTCACTAGCCCTCCTCAAAGGCATCCCCCTTTT
CCCCAAGGTAA-TGATTCATAATATGAGCAAAGCGTCACCTTGGTTGCATGTGTTTTCTATT---AA-AACTAATGCAGT
ATTTACGTGTCCTTCAGATTACGAGTCCATGGATCGCACCCTTCATATATGCCTTCTGTGTGAAGAACATGTACAGCCTA
TATGAGGCATTATCATGTGGAGGCACATTGAAAGGATGGTGGAACGGACAAAGGATGTGGTTGGTTAAGAGAATAACCTC
GTTTCTCTTTGGAGCCATTGACATTGTTCGGAAGCTACTAGGGCTATCAAAGATGACATTTGCGGTTACACCAAAGGTAA
GCAGTGAAGATGAATCCAAGAGGTATGAGCAAGAAATTATGGAATTCGGGTCATCGACTCCAGAATATGTGATCATCGCA
ACTATTGGCCTCTTTTGGCTT-----------------------------------------------------------
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--------------ATACCATTCACAGTAACATTAGCTTCTTTTGGCTTTGTGATGTTGGACTTTCTGGTGCCAATAGTT
TAA-----------------------------------------------------------------------------
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>chr6A_1_TraesCS6A01G121900
TATGAATGAAATCCAGAAATCACCTCAAAAAATCACCAGTCAATTGTGCAGGTAGATTTCATACCCCAATTGGAGTAAAG
GTTTCCAGCATTCTGGAGTAAATAACTTACAGGTATTGGGGGGTGTTTGAGGTTCTAAAGTTGTTTCTCTTGTTAGATTC
TGATAGATGGCAAAGACCAAAAGGCAGTTGATAGTGATGGAAATGTGCTTCCAACCCTTGTTTACATGGCATGTGAGAAG
AGGCCTCAACATCACCATACCTTCAAAGCTGG-GCAATGAATGCTCTGGTACACTCACAAATCTTGACCCGTAACACTAA
GTGACCGTTTATTGTGAACTTCATAGTTATAATTATTAAGCTCATTATCTTGTACTGACCATTCTTGACGAACATAATAT
TTGCACCATATTCTAATTCACAACCTTGAAGTCTTTGATAAACAGTATTGCTGGACAAGAGTAACCAAAATGTTATGGTG
TACTTTCTTTCCTTTGAGAAAATTGTAGCATAAAGTTGACACCCTGATAATTCAATTTTCCAGCATTGTATCAACAGTCC
ACAATAGAATTTTCCCAAGTACTACCCCC-TACCTAAATATAAGATGTTTTTGCAGTTTAAATTAAACTGCAAAAACGTC
TTATATTTAGTTACGGAGGTAGTATTTGGGAGTATGAGAGTTGAGGAAATGTAAGAACCTCCACTTTTATGGACTTTTTG
TGAAAAAGTGTGGTGAATATATGAGTATCTTGGTTTTACATATAGACAAAAACTCATTCATGAATGCTAGACACTAGTAC
TACCAAGTACTAACTACCAGTCTTGTCTGTATGGTATCCAGTCTTGTCCGTATGGTACAATGTTATCATCCAATTAGATG
AGCAATTTATACCATGAATGGTTGTAATACCTTCGTCATAATGGACTTAACTAAAATGTGTTAA-TTTTTCCATCGAAAC
GCAGATAAGGGTATCATCAGTGATAAGCAACAACCCTGTCATCATGAATGTAGACTGTAATACGTATTCCAGCAACAGCA
ATACGGTCAGAGATGCATTGTGCTTTTTCCTTGACGAAGAAATGGGTCACAAGCTCGGATTTGTGCAGTATCCTCAGAAC
TATGACAACATGACCAAGAATAATATATATGGTAACTCTCTCCATGTCATCAATGAAGTCAGCATCATTAAACTATAACC
TGAGTACC-ATTGTCATGTTCTCCAT----AA-----TATTTCCACAAACATAGCTACTCGATTT--AAAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGACCTCTGTATGTTGGCACTGGATGTTTCCATAGAAGGGAGATCCTTTGTGGCAGGAG
GTTCACCAAAGAATATCAAGAAGACTGGAACAGAGGGATCAAGGGCAGAATACAAGATACTAGCATAGATGAGATTGAAG
AGAAAGCAAAGTCTTTAGCAACCTGCACATCTGAACATGACACGCAATGGGGAGATGAGATTGGGTTGAAATATAATTGC
CCCATGGAGGATGTAATCACTGGATTGGCGATACATTGCAGAGGATGGGAGTCAGTCTACAACAATCCTACAAGACCAGC
GTTTACGGGTCTAGGTCCAACGACACTTGCTCAGACACTATTGCAACACAAGAGATGGAGTGAGGGTAGTTTCTCAATCT
TTCTATCAAAATACTGCCCCTTCTTGTTTGGGCATGGAAAAACCAAGTTAAGACATCAAATGAGCTACTGCATCTATGGG
CTATGGGCACCCAATTCACTCCCTACCCTGTATTATGTTATCATCCCTTCACTAGCCCTCCTCAAAGGCATCCCCCTTTT
CCCCAAGGTAA-TGATTCATAATATGAGCAAAGCGTCACCTTGGTTGCATGTGTTTTCTATT---AA-AACTAATGCAGT
ATTTACGTGTCCTTCAGATTACGAGTCCATGGATCGCACCCTTCATATATGCCTTCTGTGTGAAGAACATGTACAGCCTA
TATGAGGCATTATCATGTGGAGGCACATTGAAAGGATGGTGGAACGGACAAAGGATGTGGTTGGTTAAGAGAATAACCTC
GTTTCTCTTTGGAGCCATTGACATTGTTCGGAAGCTACTAGGGCTATCAAAGATGACATTTGCGGTTACACCAAAGGTAA
GCAGTGAAGATGAATCCAAGAGGTATGAGCAAGAAATTATGGAATTCGGGTCATCGACTCCAGAATATGTGATCATCGCA
ACTATTGGCCTCTTTTGGCTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------ATACCATTCACAGTAACATTAGCTTCTTTTGGCTTTGTGATGTTGGACTTTCTGGTGCCAATAGTT
TAAGTCCCCACATGAGGCATCAGTGTCTAATAAAGTACTCAAGTTGGTAGGCTTTATGGTTCTCTTGAAATATATTTCAT
CTAAGAAACTTCATGTGTACTTGTGTTTATATGTGGCACCGCCTTGGTGGGCGGACGCAATTTGTCCAAGCCCTTCGACT
CGAGATTAG------ACCAAATTACCCTTGCAAAAATTAAAAATG-CCCAAATGGAAAATGTTAAGAATACTAATACAAT
CAACAAGAGATCTAACTCTCTATTTATTGCAGGAAATATCTAAGTCAATACTACTCCTCTAGCAATAGTAAAATCCTGGT
ATGGGACTTGTATATAATCAAGGCTTTAGATGGACCTATGAATACAAAGGATCCAACCATTCG-TATAACTGAATGAAGA
ATGAGTTTTCTAGATTTAGCAAGGTGGCTAGGGCATGGACTTTTTGTAAACCCCTCTATTTTTATCCACAAT--------
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----------------GCTTAATCAACAACTACACTCTAAGATGCCACAACACT--CCCTCTCTTATATCCTGTCATTTC
TTAGATCTTGCTAATGAGGGAATTCATTAATTTGAAACTCTTCACAACAGCTGAGTAAAATTGTAGCATTAGATTTGTGA
AAATATTTTCAAAATA---TTTTTTCCATATTTTCCTAACCAGCATATTCGTATGAATATTAAATATGAAAGTAACTTGT
TGAAGAGTATGCAATGTCAAAACCACCATCTATTTTGGTACGAATTAATTTTTAACATGTGCCCATGTGAGCGTAATATT
AGTGCACTTTTACAATACATTTTACTTGGGAGTAACTTGTATAGGACCGGACTTTTAGAGTGAATACACAAGATCTAGCC
ATTTGGGCTGCTGAAAGGTGGAGACAAAGCAAGGAGTGACCAGAATGTACATATCACATATGAATCCCTTGGTTCTGTCG
CAATAACGTTTAGGTCTTTCGCTTACTTAGTTTTGTTTAAAATATGAATGACTGTAAGGTGTCTGGTGTATATTGTAATG
>chr6D_1
TATGAATGGAATCCAGAAATTACCTCAAAAAATCACCAGCCAATTGTGCAGGTAGATTTCGTGCCCCAATTGGAGTAAAG
GTTTCCAGCATTCTGGAGTAAATAACTTACAGGTATTAGGGAATGTTCGAGGTTCTAACGTTGTTTCTCTTGTTAGGTTC
TGATAGATGGCAAAGACCAAAAGGGAGTTGATAGTGAAGGAAATGTGCTTCCAACCCTTGTTTACATGGCACGTGAGAAG
AGGCCTCAGCATCACCATAACTTCAAAGCTGGGGCAATGAATGCTCTGGTACACTTACTAATCTTGCCCCGTCACACTAA
GTCACAGTTTATTGTAAACTTCATAGTTATAATTATTAAGCTCATTTTCTTGTACTGACCATTCTTGATGAACATAATAT
TTGCACCATATTCTAATTCACAACCTTGAAGTTTTTGATAAACAGTATTGCTGGACAAGAGTAACCAAAATGCTGTGTTG
TACTTTCTTTCCTTTGAGAAAATTGTAGCATAAAGTTGACACCCTGATAA-TCAATTTTCCAGCATTGTATCAACAGTCC
ACAATAGAATTTTCCCAAGTACTACCCCCGTACCTAAATATAAGACATTTTTGCAGTTCAAATTAAACTGCAAAAACATC
TTATATTTAGTTACAGAGGTAGTATTTGGGAGAATGAGAGTTGAGGAAATGTAAGAACCACCACTTTTACAGCCT-----
---------------------------------TTTTACATGTAGACAATAACTCATTTATGAATGCTAGGCACTAGTAC
TACCAAGTACCAACTACCAGTCCTGTCTGTATGA---------------------TACAATGTTATCATCCAATTAGATG
AACATTTTATACCATGAATGGTTGTAATACCTTCGTCATAATGGACTTAACTAAAATGTGTCAATTTTTTCCATTGAAAC
GCAGATAAGGGTATCATCAGTGATAAGCAACAGCCCTGTCATCATGAATGTGGACTGTGATATGTATTCCAACAACAACG
ATACCATCAGAGATGCATTGTGCTTTTTCCTTGACGAAGAAATGGGTCACAAGATCGGTTTTGTGCAGTATCCTCAGAAC
TATAACAACATGACCAAGAATAATCTATATGGGAACTCCCTCCATGTCATCAATGAGGTCAGCATTGTCAAACTGTAACT
TGAGTTGC-GTTCTCATGTTCGCCAT----AA-----TATTTACACTAACATAGCTACCCAATTT--AAAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGACCTCTGTATGTTGGCACTGGATGTTTCCACAGAAGGGAGATCCTTCGCGGCAAGAG
GTTCACCAAAGACTATCAAGAAGACTGGAACGGAGGGATCAAGGGTAGAATACAAGATACTAGCATAGGTGAGATTGAAG
AGAAAGCAAAGTCTTTAGCAACCTGCACATATGAACATGACACACAATGGGGAGATGAGATTGGGTTGAAGTATGGTTGC
CCCGTGGAGGATGTAATCACCGGATTGGCGATACATTGCAGAGGATGGGAGTCAGTCTACAGCAATCCTACAAGACCAGC
GTTTATGGGTCTAGGTCCAACGACACTTGCTCAGACACTACTGCAACACAAGAGATGGAGCGAGGGTAGTTTCTCAATCT
TTCTGTCAAAATACTGCCCCTTCTTGTTTGGGCATGGAAAAACCAACTTACGACATCAAATGGGCTACTGTATCTATGGG
CTATGGGCACCCAATTCACTCCCTACCCTGTATTATGTTGTCATCCCTTCACTAGCCCTCCTCAAAGGCATCCCCCTTTT
CCCCAAGGTAA-TGATTCATAATATGAGAAAAATGTCACCTTGCTTACATGTGTTTTCTATT---AA-AACTAATGAAGT
ATTCACGTGTCCTTCAGATTACGAGTCCATGGATCGCACCCTTCATATATGCCTTCTGTGTGAAGAACATGTACAGCCTA
TATGAGGCATTATCATGTGGAGACACGTTGAAAGGATGGTGGAACGGACAAAGGATGTGGTTGGTTAAGAGAATAACCTC
GTTTCTCTTTGGAGCCATTGACACAGTTCGAAAGCTATTAGGGCTATCAAAGATGACATTTGTGGTTACACCAAAGGTAA
GCATTGAAGATGAATCCAAGAGGTATGAGGAAGAAATTATGGAATTCGGGTCATCGACTCCGGAATATGTGATCATCGCA
ACTATCGCGTTACTCAACCTTGTTTGCCTCCTGGGAGGGCTAAGCCAAATCATGACAGGTGCATGGAATATACACTTGGA
TGCATTTTCCCCCCAACTCATTCTTTGTGGGATGCTAGTGATAACCAATATGCCATTCTATGAAGCAATGTTCCTGAGGA
ATGACAAAGGCAAAATACCATTCACAGTAACATTAGCTTCTTTTGGCTTTGTGATGTTGGACTTTCTGGTGCCAATAGTT
TAAGTGCCCACAGGAGACATCAGTGTCTAATAAAGTACTCAAGTTGGTATGCTTTATGGTTCTCTTGAAATATATTTCAT
CTAAGAAACTTCATGTGATTTTGTGTTTATATGTGGCACCGCCTTGGTGGGCAGACAAAATTTGTCCTAGCCCTTTGACT
CGAGATTAGCCCTTGACCAAATTACCATTGCGAAAGTTAAAAAATACCCAAATGGAAAATGTTAAGAATGCCAATACAAT
CAACGA-AGATCTAACTCTATTTTTCTGCGA-GAAAGATCTAAGTCAATACTACTCCTCTAGCAATAGTGAAATCCTGGT
ATGGGACTTGTATAGAATCAAAGCTTTAGATGGACCTATGAATACAAAGGATCCAACCACTTTCTATAACTGAATGAAGA
ATGAGTTTTCTAGATTTAGCAAGGTGGCTAGGACATGGAATTTTTGTAAACCCCTCCATTTTTCTCCACAATGCTACACG
TAACCTCTTCCCATCCCACGTGTACCCACCTCAAACCACAATTTCATGAGATGCCATCACCTCCACCTAGCACAACTGGC
CTCTCCTCCAGTGCCTTGACTCGTAGATTCAGTGATACAGCCTCCTTAGTGATTTTTTCGCTAAACACGACAACTGCTGC
CAAGACTTTATCATTGGAACTATTATTTTTATTCAGTCGCATCGTTGGCCAGTGTGGGAGGCTCTGATACTAGAGGCTGT
ACGGTGGGATACTTGCTGGACGCGAAAGTCATCGCTGTATAGGTGTCATGGTACAATAGGAGGGTATTGGGGAATTAGAG
AATTAGAAAGGTACAGTAGAAGCATAGGTAGGAACTAGATATACTTCATTGTTTGCCTCCCTACAAGGGGGGTATATATC
TCCTTATATAGGCCCTTTAGGTCGGTTACTATTCACTAAATAGTAATCCAACACACCCCGGTACTTCTAGACTAGGTTGG
GTACGGTCCATCTAAGAGACAACTGGACCCTACCAACAAACAAACCCTTCTACTAGGACACATACACCCTGGATACTTTG
AGATTAGGTTTGGTTCATCTAAGAGATAATTGGATTCTTCACACTAACAGACTCTTCTACTAGGGGACACACACACTACG
GATACTTCTAGACTAAGCTTAATCAACAACTACACTCTAAGATGCCACAACACCCCCCCTCTCTTATATCCTATCATTTC
TTAGATCTTGCTAATGAGGGAATTCATTAAGAGTAAACTCTTCACAACAACTGAGTAAAATTGTACCATTAGATTTATGA
AAATATTTTCAGAATATAATTTTTTCCATATTTTCCTAACCAACATATTCATATGAATATTAACTATGAAAGTAACTTGT
TGAAGAGTATGCAATGTCAAAATCACCATCTGTTTTGGTACGAATTAATTTTTAACATGTGTCCATGCGAGCGTAATATT
AGCGCATTTTTACAATACATTTTACTTGGGACTGACTTGTATAGGACCAGACTTTTGAAGTGAATACACAAGATCTAGCC
ATTTGGGCTGCTGGAAGGTGGAGACAAAGCAAGCTGTGACCAGAATGTACATATCACATATGAATCCCTTGGTTCTGTCG
CAATAACGTTTAGGTCTTTCACTTACTTAGTTTTGTTTAAAATATGAATGACTATAAGGTGCCCGATGTATATTGTAATG
>chr5D_870
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-----------------------------------------------------------------------AATTATATG
ACAATTTTATTCCATGAAAGGTTGTAATGCTTTTGTCATAATGGACTTAATTAGAATGTGTCAATTTTTCCGC-TGAAAT
GCAGATAAGGGTATCATCAGTGATAAGCAACAGCCCTATCATCATGAATGTGGACTGTGATATGTACTCCAACAACAACG
ATGCGGTCAGAGATGCACTGTGCTTCTTCCTTGACGAAGAAATGGGTCACAAGATTGGATTTGTGCAGTACCCTCAGAAC
TATAACAATCTGAGCAAGAATGATATATATGGGAACTCCCTCCATGTCATCAATGAGGTCAGCAGTGCCAAATTGTAACT
TGAATTAC-ATTCTCATGTTCTCCATTTATATTATATTATTGGCACTAACATGGCCAC-TCAATCTAATAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGCCCTCTGTATATTGGCACCGGATGTTTCCACAGAAGGGAGATCCTTTGCGGCAGGAA
GTTCACAAAAGACTACCAGGAAGACTGGAATGCAGGGATCAAGGACAAATTACAAGAG---AGCATAGATGAGACTGAAG
AGAAAGCCAAGTCTTTAGCAGCCTGCACATATGAACATGGCACACAGTGGGGAGATGAGATTGGGGTAAAATATGGTTGC
GCGGTGGAGGATGTAATCACCGGATTGGCAATACATTGCAGAGGATGGGAGTCGGTCTACAACAATCCTAAAAAACCAGC
GTTTATGGGTGTAGGTCCAACGACACTTGCTCAGACAATATTGCAACATAAGCGATGGAGCGAGGGTAACTTATCAATTT
TCCTTTCCAAGTACAACGTGTTCTTGTTTGGGCATGGAAAAACCAAGCTACGACATCAGATGGGCTACCATATCTATGGA
CTATGGGCACCCAACTCACTCGCTACGCTGTATTATGTTATCATCCCTTCACTGGCCCTCCTCAAAGGCACCCCCCTTTT
CCCAGAGGTAA-TGATTCATGCTATGAAAAA-GCCTCACCTTAGTTACATATATGTTTTGTATTAAA-AACTGATGTAAT
ATTCATGTGTCGTTCAGATTACAAGTCCATGGATTGCACCCTTCGTATATGTCTTCTGTGTGAAGACCATGTACAGCCTA
TATGAGGCACTATCATCTGGAGACACGCTGAAAGGATGGTGGAATGGGCAGAGGATGTGGTTGGTCAAAAGAATAACCTC
GTACCTCTTTGGAGTCCTTGACAATCTCCGGAAGTTACTTGGACTGTCAAAGATGAATTTTGTGGTTTCACCGAAGGTAA
GCGATGAAGACGAGTCCAAGAGGTATGAGCAAGAGATTATGGAATTCGGGTCGTCGGATCCAGAATATGTGATCATCGGG
ACTAT---------------------------------------------------------------------------
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>chr5D_870
AATTAGATAAC---------------------------------------------------------------------
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AATTTTATATTCTATGAAAGGTTGTAATGCTTTAGTGGACT-----TAAACTAAAATGTGTCAATTTTTCTAC-TGAAAT
GCAGATAAGGGTATCATCAGTGATAAGCAACAGCCCTATCATCATGAATGTGGACTGCGATATGTACTCCAACAACAACG
ATGCGGTCAGAGATGCACTGTGCTTCTTCCTTGATGAAGAAATGGGTCACAAGATCGGATTTGTGCAATACCCTCAGAAC
TATTACAATCTGAGCAAGAATAACATATATGGGAACTCCCTCCATGTCATCAATGAGGTCAGCAGTGCCAAATTGTAACC
TCATTTACAATTCTCATGTTCTCCAC----ATTATATTATTGACACTAACATGGCTACTTCAATTTAAAAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGCCCTATGTATATTGGCACTGGATGTTTCCACAGAAGGGAGATCCTTTGCGGCAGGAA
GTTCACCGAAGACTACCAAGAAGACTGGAATGCAGGGATCAAGGACAAATTACAAGAA---AGCATAGATGAGACTGAAG
AGAAAGCCAAGTCTTTAGCAGCCTGCACATACGAACACGGCACGCAGTGGGCAGACGAGATTGGGGTAAAATATGGTTGC
GTGGTGGAGGATGTAAACACCGGGTTGGCAATACATTGCAGAGGATGGGACTCGGTCTACAACAATCCTAAAAGACCAGC
GTTTATGGGTGTAGGTCCAACAACACTTGCTCAGACGATACTGCAACACAAGCGATGGAGCGAGGGTATCTTCTCGATTT
TCCTTTCAAAGTACAACGTCTTCTTGTTTGCGCATGGAAAAACCAAGCTACGGCATCAGATGGGCTACCATATCTATGGA
CTATGGGCACCCAATTCGCTCGCTACACTATATTATGTTATCATCCCTTCACTGGCCCTCCTCAAAGGCACCTCCCTTTT
CCCAGAGGTAAATGATTCATACTATGGAAAG-GCCTCGCCTTAGTTACATATATGTTTTGTATTAAAAAACTGATATAAT
ATTCATGTGTTGTTCAGATTACAAGTCCATGGATCGCACCCTTCGTATATGTCTTCTGCGTGAAGAACATGTACAGCCTA
TATGAGGCACTATTATCTGGAGACACGCTAAAAGGATGGTGGAATGGACAGAGGATGTGGTTGGTCAAAAGAATAACCTC
GTACCTCTTTGGAGTCCTTGACAATCTCCGGAAGTTACTTGGACTGTCAAAGATAAATTTTGTGGTTACACCAAAGGTAA
GCGATGAAGACGAGTCCAAGAGGTATGAGCAAGAGATTATGGAATTCGGGTCGTCGGATCCAGAATATGTGATCATCGCG
GCTATTG-------------------------------------------------------------------------
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>chr5D_870
AATTAGATAAC---------------------------------------------------------------------
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AATTTTATATTCTATGAAAGGTTGTAATGCTTTAGTGGACT-----TAAACTAAAATGTGTCAATTATTCTAC-TGAAAT
GCAGATAAGGGTATCATCAGTGATAAGCAACAGCCCTATCATCATGAATGTGGACTGCGATATGTACTCCAACAACAACG
ATGCGG-CAGAGATGCACTGTGCTTCTTCCTTGATGAAGGAATGGGTCACAAGATCGGATTTGTGCAGTACCCTCAGAAC
TATTACAATCTGAGCAAGAATAACATATATGGGAACTCCCTCCATGTCATCAATGAGGTTAGCAGTGCCAAATTGTAACC
TCATTTACAATTCTCATGTTCTCCAT----ATTATATTATTGACACTAACGTGGCTACTTCAATCTAAAAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGCCCTATGTATATTGGCACGGGATGTG-CCACAGAAGGGAGATCCTTTGCGGCAGGAA
GTTCACCGAAGACTACCAAGAAGACTGGAATGCAGGGATCAAGGACAAATTACAAGAA---AGCATAGATGAGACTGAAG
AGAAAGCCAAGTCTTTAGCAGCCTGCACATACGAACATGGCATGCAGTGAGGAGACGAGATTGGGGTAAAATATGGTTGC
TCGGTGGAGGATGTAAACACCGGGTTGGCAATACATTGCAGAGGATGGGACTCGGTCTACAACAATCCTAAAAAACAAGC
TTTTATGGGTGTAGGTCCAACAACACTTGCTCAGATGATACTGCAACACAAGCGATGGAGCGAGGGTATCTTCTTGATTT
TCCTTTCAAAGTACAACGTCTTCTTGTTTGCACATGGAAAAACCAAGCTACGGCATCAAATGGGCTACCATATCTATGGA
CTATGGGCACC-AATCCGCTCGCTACACTATATTATGTTATCATCCCTTCACTAGCCCTCCTCAAAGGCACCTCCCTTTT
CCCAGAGGTAAATGATTCATACTATGGAAAG-GCCTCGCCTTAGTTACATATATGTTTTGTATTAGAAAACTGATGTAAT
ATTCATG---TGTTCAGATTACAAGTCCATGGATCGCACCCTTCGTGTATGTCTTCTGCGTGAAGAACATGTACAGCC--
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>chr5B_870
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-----------------------------------------------------------------------AATTATATG
ACAATTTTATTCCATGAAAGGTTGTAATGCTTTTGTCATAATGGACTTAACTAGAATGTGTCAGTTTTTCCGC-TGAAAT
GCAGATAAGGGTATCATCAGTGATAAGCAACAGCCCTATCATCATGAATGTGGACTGTGATATGTACTCCAACAACAACG
ATGCGGTCAGAGATGCACTGTGCTTCTTCCTTGACGAAGAAATGGGTCACAAGATTGGATTTGTGCAGTACCCTCAGAAC
TATAACAATCTGAGCAAGAATGATATATATGGGAACTCCCTCCATGTCATCAATGAGGTCAGCAGTGCCAAATTGTAACT
TGAATTAC-ATTCTCATGTTCTCCATTTATATTATATTATTGGCACTAACATGGCCAC-TCAATCTAATAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGCCCTCTGTATATTGGCACCGGATGTTTCCACAGAAGGGAGATCCTTTGCGGCAGGAA
GTTCACAAAAGACTACCAGGAAGACTGGAATGCAGGAATCAAGGACAAATTACAAGAG---AGCATAGATGAGACTGAAG
AGAAAGCCAAGTCTTTAGCAGCCTGCACATATGAACATGGCACACAGTGGGGAGATGAGATTGGGGTAAAATATGGTTGC
GCGGTGGAGGATGTAATCACCGGATTGGCAATACATTGCAGAGGATGGGAGTCGGTCTACAACAATCCTAAAAAACCAGC
GTTTATGGGTGTAGGTCCAACGACACTTGCTCAGACAATATTGCAACATAAGCGATGGAGCGAGGGCAACTTATCAATTT
TCCTTTCCAAGTACAACGTGTTCTTGTTTGGGCATGGAAAAACCAAGCTACGACATCAGATGGGCTACCATATCTACGGA
CTATGGGCACCCAACTCACTCGCTACACTGTATTATGTTATCATCCCTTCACTGGCCCTCCTCAAAGGCACCCCCCTTTT
CCCAGAGGTAA-TGATTCATGCTATGAAAAA-GCCTCACCTTAGTTACATATATGTTTTGTATTAAAAAACTGATGTAAT
ATTCATGTGTCGTTCAGATTACAAGTCCATGGATTGCACCCTTCGTATATGTCTTCTGTGTGAAGAACATGTACAGCCTA
TATGAGGCACTATCATCTGGAGACACGCTGAAAGGATGGTGGAATGGGCAGAGGATGTGGTTGGTCAAAAGAATAACCTC
GTACCTCTTTGGAGTCCTTGACAATCTCCGGAAGTTACTTGGACTGTCAAAGATGAATTTTGTGGTTTCACCGAAGGTAA
GCGATGAAGACGAGTCCAAGAGGTATGAGCAAGAGATTATGGAATTCGGGTCGTCAGATCCAGAATATGTGATCATCGGG
ACTAT---------------------------------------------------------------------------
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>chr5B_870
AATTAGATAAC---------------------------------------------------------------------
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AATTTTATATTCTATGAAAGGTTGTAATGCTTTTGTGGACT-----TAAACTAAAATGTGTCAATTTTTCTAC-TTAAAT
GCAGATAAGGGTATCATCAGTGATAAGCAACAGCCCTATCATCATGAATGTGGACTGCGATATGTACTCCAACAACAACG
ATGCGGTCAGAGATGCACTGTGCTTCTTCCTTGATGAAGAAATGGGTCACAAGATCGGATTTGTGCAGTACCCTCAGAAC
TATAACAATCTGAGCAAGAATAACATATATGGGAACTCCCTCCATGTCATCAATGAGGTCAGTAGTGCCAAATTGTAACC
TCATTTACAATTCTCATGTTCTCCAT----ATTATATTATTGACACTAACATGGCTACTTCAATTTAAAAGGTGGAGATG
GGTGGTATGGACAGTTTGGGTGGTCCTATGTATATTGGCACTGGATGTTTCCACAGAAGGGAGATCCTTTGCGGCAGGAA
GTTCACCGAAGACTACCAAGAAGACTGGAATGCAGGGATCAAGGACAAATTACAAGAG---AGCATAGATGAGACTGAAG
AGAAAGCCAAGTCTTTAGCAGCCTGCACATATGAACACGGCACGCAGTGGGGAGACGAGATTGGGGTAAAATATGGTTGC
GTGGTGGAGGATGTAAACACCGGATTCGCAATACATTGCAGAGGATGGGAGTCGGTCTACAACAATCCTAAAAAACCAGC
GTTTATGGGTGTAGGTCCAACAACACTTGCTCAGACGATACTGCAACACAAGCGATGGAGCGAGGGTATCTTCTCGATTT
TCCTTTCAAAGTACAACGTCTTCTTGTTTGCGCATGGAAAAACCAAGCTACAGCATCAGATGGGCTACCATATCTATGGA
CTATGGGCACCCAATTCGCTCGCTACACTATATTATGTTATCATCCCTTCACTGGCCCTCCTCAAAGGCACCTCCCTTTT
CCCAGAGGTAAATGATTCATACTATGGAAAG-GCCTCACCTTAGTTACATATATGTTTTGTATTAAAAAACTGATGTAAT
ATTCATGTGTTGTTCAGATTACAAGTCCATGGATCGCACCCTTCGTATATGTCTTCTGCGTGAAGAACATGTACAGCCTA
TATGAGGCACTATCATCTGGAGACACGCTAAAAGGATGGTGGAATGGACAGAGGATGTGGTTGGTCAAAAGAATAACCTC
GTACCTCTTTGGAGTCCTTGACAATCTCCGGAAGTTACTTGGACTGTCAAAGATGAATTTTGTGGTTACACCGAAGGTAA
GCGATGAAGACGAGTCAAAGAGGTATGAGCAAGAGATTATGGAATTCGGGTCGTCGGATCCAGAATATGTGATCATCGGG
ACTAT---------------------------------------------------------------------------
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>chr5A_870
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-----------------------------------------------------------------------AATTATATG
ACAATTTTATTCCATGAAAGGTTGTAATGCTTTTGTCATAATGGACTTAACTAGAATGTGTCAATTTTTCTGC-TGAAAT
GCAGATAAGGGTATCATCAGTGATAAGCAACAGCCCTATCATCATGAATGTGGACTGTGATATGTACTCCAACAACAACG
ATGCGGTCAGAGATGCACTGTGCTTCTTCCTTGACGAAGAAATGGGTCACAAGATTGGATTTGTGCAGTACCCTCAGAAC
TATAACAATCTGAGCAAGAATGATATATATGGGAACTCCCTCCAAGTCATCAATGAGGTCAGCAGTGCCAAATTGTAGCT
TGAATTAC-ATTCTCATGTTCTCCATTTATATTATATTATTGGCACTAACATGGCCAC-TCAATCTAATAGGTGGAGATG
GCTGGTATGGACAGTTTGGGTGGCCCTCTGTATATTGGCACCGGATGTTTCCACAGAAGGGAGATCCTTTGCGGCAGGAA
GTTCACAAAAGACTACCAGGAAGACTGGAATGCAGGAATCAAGGACAAATTACAAGAG---AGCATAGATGAGACTGAAG
AGAAAGCCAAGTCTTTAGCAGCCTGCACATATGAACATGGCACACAGTGGGGAGATGAAATTGGGGTAAAATATGGTTGC
GCGGTGGAGGATGTAATCACCGGATTGGCAATACATTGCAGAGGATGGGAGTCGGTCTACAACAATCCTAAAAAACCAGC
GTTTATGGGTGTAGGTCCAACGACACTTGCTCAGACAATATTGCAACATAAGCGATGGAGCGAGGGTAACTTATCAATTT
TCCTTTCCAAGTACAACGTGTTCTTGTTTGGGCATGGAAAAACCAAGCTACGGCATCAGATGGGCTACCATATCTATGGA
CTATGGGCACCCAACTCACTCGCTACGCTGTATTATGTTATCATCCCTTCACTGGCCCTCCTCAAAGGCACCCCCCTTTT
CCCAGAGGTAA-TGATTCATGCTATGAAAAA-GCCTCACCTTAGTTACATGTATGTTTTGTATTAAAAAACTGATGTAAT
ATTCATGTGTCGTTCAGATTACAAGTCCATGGATTGCACCCTTCGTATATGTCTTCTGCGTGAAGAACATGTACAGCCTA
TATGAGGCACTATCATCTGGAGACACGCTGAAAGGATGGTGGAATGGGCAGAGGATGTGGTTGGTCAAAAGAATAACCTC
GTACCTTTTTGGAGTCCTTGACAATCTCTGGAAGTTACTTGGACTGTCAAAGATGAATTTTGTGGTTTCACCGAAGGTAA
GCGATGAAGACGAGTCCAAGAGGTATGAGCAAGAGATTATGGAATTCGGGTCGTCGGATCCAGAATATGTGATCATCGGG
ACTAT---------------------------------------------------------------------------
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>SNPs
--------------------S------------------S--------------------S-S-----------------
-------------------------------------S---SS----S----------S-----------------S---
------------------------S------------S---------------------------------S--------
--------S----------S-----------------------------------S--S-------S-----S-------
--S--S---------S------------------------------S---------------------S-----------
--------------------------------S---------------------------------------S-S--S--
--------------------------------------------------S-----------------------------
---------------------------------------------SS-----------S------------------S--
--------------S-----------------S--------------------------S---------SS-S--SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-------S--------S-----------S---------
----------S-----------S----------SSSSSSSSSSSSSSSSSSSSSS-------------------------
-S--S--------------------------------------------------------S------------S-----
--------------------------------S------------------S------S---S--------S-----S-S
-----------------------------------------------------S--------------------------
---S----------------------------S-----S-----------------S--------SS-S-----S-----
-----SS-----S-----------------------------S---S-------------S-------------------
-----------------------------------------------------S-----------------S--------
------------S------------------S------------------------------------------------
------------------------------S-------------------------------------------SS----
---S----------------S-----------------------------------------------------------
-----S------------------------------------------------------S-------------------
----S---------------------------------------------S-----------S-------S---------
--------------------------------------------------------------------------------
----------------------------S-----------------S-----------------------------S---
---S----------------------------------------------------------------------------
----------------------S---S-----------------------------------------------------
-----------------------S--------------------------------------S-----------------
---S----------------------------------------------------------------------------
-------SSS-SS-SSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S------S---S--------------------------------S------------------------------
-----------------SSS--------------------------------S---SS---------S-------S----
--------------------------S----S---S-------SS------------------------S-S--------
----S-S------------S-S---S-SSS-S----S--------------------------------S----------
--------------S------S-------------------------------------S-SS-----------------
--------------------------------S------S----------------S------S----------------
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-----------------------------------------------------S------------------S-------
------------------------------SSSS---------------S---------------S----------S---
-----------S------------------------------S-------S------------S----------------
----------------------S--------S-----------------------------S-----S------------
--S---S------------------------S-S--------------S-------SS----------------------
-------------S-------------------SS---------------------------------------------
--------------------S--------------------------------S-------S-S-S--------------
>forward_249
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--------------------------------------------------------------------GCATGTGAGAAG
AGGCCTCAA-----------------------------------------------------------------------
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>reverse_1352
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-----------------------------------------------------------------------TGGCAGGAG
GTTCACCAAAG---------------------------------------------------------------------
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>forward_1094
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---------------------------------ACGAAGAAATGGGTCACAAGC--------------------------
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>reverse_2486
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-----CCCCACATGAGGCATCAGTG-------------------------------------------------------
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