>input_sequence_54832
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------ATGGACTTGGGTGACCACTTCGAACGTTCCGGGCCGACGCATTTGATGGCAAGAGCCGGCTCCGGTTCTATTCG
GATGATGATTGACTGGTATGTACACGTACGCGTTGCTCGATGGTATGCGTA------------------TACTTGTGGTG
TGCATTTTCCGTGTATTAATTGGTGGATTAGAGGTC--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TATATATGCATGCATGGTGCACGAGGTGTAATGCACGGCATGG
GTTCATAGGAAGTGTATACGTACGTCGGTACGTGGCATAAGGAGACACTGGAGTCATGCATGCATGCATGCCAGGCGTGC
ATATGCATGCCACA------------------------------------------------------------------
-----------------------------------------------------------------------------GTT
TTCTTTTCAGCCAAATTAACGTGTGAACTGATCTATCTACGACTATCTTATAGGGACAAAGAGGAGCACCGCCGCTGCGT
CGCCGCTAGCCTTGTCAACAGCACGTACGTCATGGAGAAGGACCGCGGCAGATGGAGCAGGGCGCAACTCGCGCCGGCGT
GGTGGACGAGCTTTCACTTTCACTTGGAGCGCACGCGCCTACTTGAGGACGAACGTTCCATCTTTGGCGCTATCTACAGG
CACGT---GCCGCCGCCGGGCCAGCATCATCCCTCCGCTCCACACTACATCGTCGCCTTCAGGGGCACCATGACA-----
----GTAGATGACATGCAGCTTAACGCACACATCGTGACCAACACCGTGCATGACTCCAACCGCTCGCAGCTCGCTCACC
AGGCGGTCCGCAACCTCCTCGCCACAGTCCACAGCCGATGCAT---CGTCTGGCTCACAGGCCACTCTCAGGGTGCGTCG
CTGGCGCTGGAGGTGGGGCGGCACCTAATGCTAGACCACCGGCGCAACCTCCCGACCTTCCTCTTCAATCCGCCGCAGGT
ATCGCTGGCGCCCGTCATCAACTTGACGCATTCGC---CGGACGACAAGACGGACCTGTACACCTTGAGCAAGCTCGTCA
AGGCTGGCCTCGGGAAGGTCCTCCGTCCCCACCGGAAGCGCATGGAGAAGCTGTTCGAGCAGCTGTCCTCGTGGGCACCC
AACCTGTACGTGCACGAGAAGGACTTCCTGTGCCAGGGCTTCATCGACTACTTCGAGCAGAGGGAGAAGCTGGAGAGGCG
CTTCCGCGGAGCTGCCAGGTCGGCAACGGCACTCTCCTACCGTGACATGCTCTTTTACCTGCTCGGCAAGGCCAAGGAGC
CGAGGCCGCACCTCCTGCCATCAGCAACGGTGTGGAAAAACTCGACCCATGTCTGCCGCCTTCGCTCACATGGTCTCAAG
CAATGGTGGAAACCGGACGGTGAACTTATCTTGACCCCAAGGCGTTACACATATTAA-----------------------
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>chr5D_1_TraesCS5D01G480900
GGTCCTCCTTTCTTTTTCTCTCTCTTCACATGCATGGTCTCCCTCTCATTTCTTTCTTCCCAACCGGACACCACACCATA
ATCTCATCATATGGATTGTCCCGACCTACTTTTTCTCCTCCCAACCGGATATTTTGTGATTAACATTGGATGGCTCACTC
CGGCATCATGTCCGCTGACCACGTCCAGACACAAAAACGAACATATACTAAAGACATTTGTGGGTCGGCGTTGGAGATGC
CCTTAGTTTGGGAAAGGCTGAACTTGAATAGGTCCAATTAAATTCGTGAGGCAGTGGCTTGTTTTTTCTTTCTCTGCCAG
GAGCCATTGGATAGAGTTGGATGGATGGTTGAAATCTGTTGGACTCCATGAACTCGTTCCATTTATATTGGTTAGATACT
AACATAGGAGTAGGAGTGGCCATATATCAACACCCTAAAATGTGAGCAATGGCTAAGTTATGGACGGCATATCAGGCTGC
CTTGACTAACCTTAAGATTTGCTCCTTCTGATTGGGCATGGGAAGGCTGGGATGAATCATTGATGGGATAGGAAGTTTTG
GCTGACCCAATTGTGAGAAAGATTCGACCAGGCGGGCATTTGACTGGGCCTGCCTCCTATCCTATATACAAAGAACGTCT
CTCTTATGCTTTTGCCGGCCTAGAGCATCTTTTTTTTTTTTTGAGACAAGCCTAGAGCATCTCTTGTTGTGTGCTTGGGT
ACCTAACGTCTTTTCGCTAAAAAGCAAAAAAATAAAGGAAAACAAACGTGCTAGCCTCTGCGGGTTGACTAATTTTTTTA
TCTACGTACGGGAAACC------------------------------------------GTGTACTTGTACATTCTACTC
AGTATGTAGCTAGCCCCACCTATATATATGTACCCCGTGGGAGTAACACCTGGCACAACCGCCGGAAGGAGCACACTAGC
TAGTACACTACTGCTTCAACAAAAGAGAACGA----GTACAGCACTCTGTCTGGATCTTTAGTTGGAGAAATAGTTAAAG
TTGGGGATGGACTTGGGTGACCACTTCGAACGTTCCGGGCCGACGCATTTGATGGCAAGAGCCGGCTCCGGTTCTATTCG
GATGATGATTGACTGGTATGTACACGTACGCGTTGCTCGATGGTATGCGTA------------------TACTTGTGGTG
TGCATTTTCCGTGTATTAATTGGTGGATTAGAGGTC--------------------------------------------
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-------------------------------------TATATATGCATGCATGGTGCACGAGGTGTAATGCACGGCATGG
GTTCATAGGAAGTGTATACGTACGTCGGTACGTGGCATAAGGAGACACTGGAGTCATGCATGCATGCATGCCAGGCGTGC
ATATGCATGCCACA------------------------------------------------------------------
-----------------------------------------------------------------------------GTT
TTCTTTTCAGCCAAATTAACGTGTGAACTGATCTATCTACGACTATCTTATAGGGACAAAGAGGAGCACCGCCGCTGCGT
CGCCGCTAGCCTTGTCAACAGCACGTACGTCATGGAGAAGGACCGCGGCAGATGGAGCAGGGCGCAACTCGCGCCGGCGT
GGTGGACGAGCTTTCACTTTCACTTGGAGCGCACGCGCCTACTTGAGGACGAACGTTCCATCTTTGGCGCTATCTACAGG
CACGT---GCCGCCGCCGGGCCAGCATCATCCCTCCGCTCCACACTACATCGTCGCCTTCAGGGGCACCATGACA-----
----GTAGATGACATGCAGCTTAACGCACACATCGTGACCAACACCGTGCATGACTCCAACCGCTCGCAGCTCGCTCACC
AGGCGGTCCGCAACCTCCTCGCCACAGTCCACAGCCGATGCAT---CGTCTGGCTCACAGGCCACTCTCAGGGTGCGTCG
CTGGCGCTGGAGGTGGGGCGGCACCTAATGCTAGACCACCGGCGCAACCTCCCGACCTTCCTCTTCAATCCGCCGCAGGT
ATCGCTGGCGCCCGTCATCAACTTGACGCATTCGC---CGGACGACAAGACGGACCTGTACACCTTGAGCAAGCTCGTCA
AGGCTGGCCTCGGGAAGGTCCTCCGTCCCCACCGGAAGCGCATGGAGAAGCTGTTCGAGCAGCTGTCCTCGTGGGCACCC
AACCTGTACGTGCACGAGAAGGACTTCCTGTGCCAGGGCTTCATCGACTACTTCGAGCAGAGGGAGAAGCTGGAGAGGCG
CTTCCGCGGAGCTGCCAGGTCGGCAACGGCACTCTCCTACCGTGACATGCTCTTTTACCTGCTCGGCAAGGCCAAGGAGC
CGAGGCCGCACCTCCTGCCATCAGCAACGGTGTGGAAAAACTCGACCCATGTCTGCCGCCTTCGCTCACATGGTCTCAAG
CAATGGTGGAAACCGGACGGTGAACTTATCTTGACCCCAAGGCGTTACACATATTAAGTGGATCTGGAGTGAGTATTACC
GCCTTATCTGTCATAGTATATTAAGATTATCTATGGATAATGATATCTCCG-----------------------------
----------------------------------------------------------------AGGAAGTAGTAAAATA
AGAAAATTTGGACCCACGTACACTACAAGTACCGTGGAGCGTGACGTAGTATTGTTATGTGTGCTATATATTTCTCAATT
ATGGGAGTAGTTTATTTTCGTACTAATTGTGGACCGGATATATGCTGGAATACTCGAGTGATAGATTAGAGCAAGGATAA
TAAGATAGCCC--GCTGGCTATAAAATTATGTGATGTCACCTATAGTCATCATAAAGCCAAGCCATATAACAGGATAGCC
ATAGGCTGGCTGTTTGGTTGCCTTTATTAAAGATTCGGAAAAACTAACACCCACATGTGTGGGCGTTTGCACATCGCCCA
CACGCCTTCATCACCACTCATTTTGTCACGTACAAACAGATGACATCAGCAGAAATCTTTTTGGTTTTCGGCTTAAAAAT
GTTTTATCTCCTAATAAAAAA-GCGAATTAAAAATCTGTTTTAACCATTAAATTCGTCTCAACGAGATCTTCAAAATTAG
ACCCCATGTTGATATGTTTCGACGAAAAACAATTTTGCCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAATGC
TTAAACAAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTTGATGATGGCAATTCCAGTAC
TTTGACCATGAAAATATTTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGGCAATTTTAGTTTATGGTGCA
TGGCAAGTCTAGTTTCTTAATTCCCTGTTTTATAATATGTCAAAATTTACTTTTAAATGTAGAAGAAAATAGCTGAAACA
AATCAAGTCAACTTCAGTGTAAACATCATCGCAATTCATGTGCAATAGACATGGCAAATTTTAATCAAAA-AAATTTCGT
CGGAATATATTGATATGAGATCTAATTTCGAAGA
>chr5B_1
GGGCCTCCTTTC-TTTTCTCTCTCTTCACATGCATGGTCTCCCTCTCATTTCTCTCCTCCCAACCAGACGCCACACCATA
ATCCCATCACATGCATTGTCCCCACCTACTTTTTCTCCTGCCAGCCAAATATTTCGTGATTAACATTAGATGGCTCACCC
CGGCATCATGTCCGCTGACCACGTCCAGACACAAAAACGGACATATACCGAAGACATTTGCGGGTCGGCGTTGGAGATGG
CCTTAGTTTGCGAAAGGCTGAACTTGAATAGGTCCAATTAAATTCGTGAGGCACTGGCTA-TTTTTTTTTTCTCTGCCAG
GAACCATTGGATAGAGTTGGATGGATGGTTGAAATCGGTTGGACTCCACGAACTCGTTCCATTTATATTGGTTAGATACT
AACATAGGAGTAGGAGTGGCCATTTATCAACACCCTAAAATGTGAGCAATGGCTAAGTTATGGACGGCATATCAAGCTGC
CTTGACT-ACCTTAAGATTTGCTCCTTCTGATTGGGCATGGGAAGGCTGGGATGAATCATTGATGGGATAGGAAGTTTTG
ACTGACCCAATTGTGAGAAAGATTCGACCAGGCGGGTATTTCACTGGGCCTGCCTCCTATCCTATATACAAAGAACGTCT
CTCTTATGCTTTTGCCGGCCTAGAGCATCTTTCA--TTTTTTGAGACAAGCCTAGAGCATCTCTTGTTCTGTGCTTGGGT
ACCTAACGTCTTTTCGCTAAAAAAC----------AGGAAAACAAACGTGCTAACCTCTACGGGTTGACTATTTTTTTTA
TCTACGTACGGGAAACCACTACAGTGCAAGTGTACTTTTTTTTTTGAGTTGCAGTGCAAGTGTACTTGTACATTCTAGT-
AGTATGTAGCTAGCCC-ACCTATATATATGTACCCCTTGGGAGTAATCCCTGTCAAAAGCACCGGAAGGAGCACACTAGC
TAGTACACTACTGCTTCAACAAAAGAGAACAAGCACGTACAGCACTCTGTCTGGATCTTTAGTTGGAGAAATAGTGAAAG
TTGGAGATGGACTTGGGTGACCACTTCGAACGTTCCGGGCCGACGCATTTGATGGCAAGAAC------------------
------GATTGACTGGTATGTACACGTACGCGTGGCTCGATGGTATATGCGTAACTACCTATATATATGTACTTGTGGTG
TGCATTTTCCGTGTATTAATTGGTGGATTAGAGGTCTACTTCCTCCGTTCCTAAATATAAGTCTTTGTAGAGATTCCACT
GTGAACCACATACGGATGTATATAGATGCATTTGAAGTGTAGATTCATTCATTTTGCTTCGTATGTAGTCCAGCTGGTGG
AATCCCTACAAAGACTTATATTTAGGAACGAAGGGAGTATATATGCATGCATGGTGCACGAGGTGTAATGCACCGCATGG
GTTCATAGGAAGTGACGAAGTGTATACGTACGTTGCATAAGGAGACA---GAGTCATGCATGCATGCAGGCCAATATAAA
TGCCGTAACTCAAGCAGAATACGTGATCAGCAGTAACTTAAGTTTAGTTTTTTCTTTTGGTTGCGAATAGTAACTTAAGT
TTAGTTATAACCGTGTGCATCATCGTGTAATTCAAACTCGTCTAGTGTAGATCATAAAAATAATGGTCAAACATATTGTT
TTCTTTTCAGCCAAATTAACGTT--AACTGATCTATCTATGACTATCTTATAGGGACAAGGAGGAGCACCGCCGCTGCGT
CGCCGCTAGCCTTGTCAACAGCACGTACGTCATGGAGAAGGACCGACGCCGATGGAGCAGGGCGCAACTCGCGCCGGCAT
GGTGGACGAGCTTTCACTTTCACTTGGAGCACACGCGCCTACTTGAGGACGAACATTCCATCTTTGGTGCTATTTACAGG
CACGTGCCGCCGCCGCCGGGGCAGCATCATCCCTCCGCTCCACACTACATCGTCGCCTTCAGGGGCACCATGCTGCGGCA
CATGGTGGATGACATGCACCTTAACGTACAGATCATGACCAACACCGTGCATGACTCCATCCGCTCGCAGCGCGCTCACG
CGGCGGTCCGCAACCTCCTCGCGGCCGTCGACAGCCGATACAT---CGTCTGGCTCGCAGGCCACTCTCAGGGTGCGTCG
CTGGCGCTGGAGGTTGGGCGGGACCTAATGCGAAACGGCCGGCGCAACCTCCCGACCTTTCTCTTCAATCCGCCGCATGT
ATCGTTGGCGCCAGTCATCAACTTGACGCATTCGGCGGCGGACGACAAGAGGGAGCTGTACGTCTTGAGCAACCTCGTCA
AGGCTGAGCTCGGGAAGGTCCTCCCTCCCCACCGGAAGCGCATGGAGCAGCTGTTCGAGCAGCTGTCCTCGTGGGCACCC
AAGCTGTACGTGCACGAGAAGGACTTCATCTGCCAGGGCTTCATCGACTACTTCGAGCAGAGGGAGCAGCTGGAGAGGCG
CTTCCGCGGCGCTGCCAGGTTTGCAACGGTACTCTCCTACCGTGACATGCTCATTCACCTGCTCGGCGTGGACAAGGAGC
CGAGACCGCACCTCCTGCCATCAGCAACGTTGTGGAAGAACTCGACCGGT---TGCCGCCTTCGATCGCACCGTCTCAAG
CTATGGTGGAAACCGGACAGTGAACTTAGGTTGACCCAAAGGCGTCACACATATTAAGTGGATCTGGAGTGAGTATTACC
GCCTTATCTGCCATAGTATATTAAGGTTATCTATGGATAATGGCATACTCCCTCCGATCAATATTAATTGTTGCCGTATC
AGATATGCCTAGACATGTTTTAATGCTAGATACATCCAATTCGACAACTATTGATATGGATGCCAGGAAGTAGTAAAATA
AGAAATC-TGGACCCACGTACACTACAAGTACCGTGGAGTGTGATGTAGTATTGTTATGTGTGCTATATATTTCTCAATT
ACGGGAGGAATTTATTTTCGTATTAATAGTGGGCCGGATATATACTGGAATATTCAAGTGATAGATTAGAGCAAGGATAA
TAGGAGAGCCCATGCTGGCTATAAAGTTATGTCATGTCACTGGTAGTTATCATAAAGCCAAGCCATATAACAGGATAGCC
ATAGGCTGGCTGTTTAGTTGCCTTTATTAAAGATT---------------------------------------------
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>chr2B_1673
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----------------------------------------------------GACTGCAAGCGCTCCCAGCGCGCGCACC
AGGCGGTGGACACGCTCCTGGCGACCGTCGGCGCCGACAACCGCGCCGTCTGGCTCACGGGGCACTCCCTCGGCGCGTCG
CTGGCGCTGGACGTCGGGAGGGCCATGATGTCGGAGCAGGGGTTCAGCCGGCCGACCTTCCTCTTCAACCCGCCGCAGGT
GTCGCTGGCCCCGGCGATCAACAGGCTGCTCCCGTCCGAGGGGCTGAGGAAGGACCTGTACGCCACGAGCAACCTCGTCA
AGGCCGGCCTCGGGCTGGTCCTGAGCCCGCACCGGAAGCGCATGGAGAAGCTGTTCGAGCAGCTGTCGGCGTGGGAGCCG
AAGCTGTACGTGCACGACAGGGACCCCATCTGCCAGGGCTTCATCGACTACTTCGAGCAGCGGGAGCAGTTGGAGGAGCG
CTTCCATGGCGTGGCCAAGTCGGCGAGGACACTGTCGTACCGTGACATGCTCTTCTCCGCGGTTGGCAAGGAGAAGGAGC
---GGCCGCACCTCCTGCCGTCGGCGACGCTCTGGAGGAACTC-------------------------------------
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>chr1D_2666
TTAAAACTTC----------------------------------------------------------------------
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------------------------------------GGAAAAACTAACGCCCACATGTGTGGGCGTTTGCACATCATCCA
CACGCCTTCATCATCACTCATTTTGCCACGTATGAACAGATGACATCAGCAGAAATCTTTTTAGTTTTCGGCTTAAAAAT
GTTTTATCTCCTAATTAAAAAATCAAATTAAAAATCTGTTTTCACCATTAAATTCGTCTCGACGAGATCTTCAAAACTAG
ACCCCATGTTGATATGTTTCGACGAA--TTTTTTTTGCCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTCGATGATGGCAATTCCAGTAC
TTTGATCATGAAAATATTTTTTTGTATGAACCATGGCAATTTGAAGTGCATGTATCATGGCAATTTTAATTTATGGTGCA
TGGCAAGTCTAGTTTCTTAATTCCCCATTTTATAATATGTTAAAATTTACTCTTAAATGTAGAAGAAAATAGCTGAAACA
TATCATGGCAACTTCAGTGTAAATATCATGGCAATTCATGTGCAATAGATACGG-AACTTTTAACAAAAGAAAATTT-GT
CGAAATATATTGATATGAGATCTAGTTTCGAAGA
>chr5D_2668
AAAGT-A--C----------------------------------------------------------------------
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------------------------------------GGAAAAACTAACGCCCACACGTGTGGGCGTTTGCACATCACCCA
CACGCCTCCATCACCACTCATTTTGCCATGTATGAACAGATGACATCAGCAGAAATCTTTTTGGTTTTCGGCTTAAAAAC
GTTTTATCTCCTAATTAAAAAAGCGAATTAAAAATCCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAG
ACCCCATGTTGATATGTTTCGACGAAATTTTTTTTTGCCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTCGATGATGGCAATTCCAGTAC
TTTGATCATGAAAATATTTTTTTGTATGAACCATGACAATTTTAAGTGCATGTATCATGGCAATTTTAATTTATGGTGCA
TGACAAGTCTAGTTTCTTAATTCCCCATTTTATAATATGTCAAAATTTACTTTTAAATGTAGAAGAAAATAGCTGAAATA
TATCATGGCAACTTCAGTATAGACATTATGGCAATTCATGTGCAACAGACACGGCAACTTTTAACCAAAAAAAATTTCGT
CGAAATATATTGATATGAAATCTAGTTTCGAAGA
>chr3D_2668
AAATATA--C----------------------------------------------------------------------
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------------------------------------GGAAAAAGTAACGCCCACACGTGTGGGCGTTTGCACATCGCCTA
CACGCCTCCATCACCACTTATTTTGCCATGTATGAACAAATGACATCAGCAAAAATCTTTTTGGTTTTTGGCTTAAAAAT
ATTTTATCTCCTAATTAAAAAAGCGAATTAAAAATCCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAG
ACCCCATGTTGATATGTTTCGATGAA--TTTTTTTTGCCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTTTATGATGGCAATTCCAGTAC
TTTGACCATGAAAATACTTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATAGCAATTTTAGTTTATGGTGCA
TGGCAAGTCTAGTTTCTTAATTCCCTGTTTTATAATATGTCAAAATTTACTTTTAAATATAGAAGAAAATAGCTGAAACA
TATCATGACAACTTCAGTGTAAACATCATGGCAATTCATGTGCAATAGACACGGCAACTTTTAACAACAACAAA-TTCGT
CGAAATATATTGATATGAGATCTAGTTTCGAAGA
>chr7D_2671
GAT--TA--C----------------------------------------------------------------------
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------------------------------------GGAAAAACTAACGCCCACACGTGTGGGCGTTTGCACATCACCCA
CACGCCTCCATCACCACTCATTTTGTCATGTATGAACAGATGACATCAACAGAAATCTTTTTGGTTTTCAGCTTACAAAT
GTATTATCTCCTAA-TAAAAAAGCGAATTAAAAATCCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAG
ATCCCATGTAGATATGTTTCGACGAAAAA-TTTTTTGCCCAAAAGTTGCCATGATGTTTACGCTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTTGATGATGGCAATTCCAGTAC
TTTGACAATGAAAATA-TTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGGCAATTTTAGTTTATGATGCA
TGGCAAGTCTAGTTTTTTAGTTCCCCGTTTTATAATATGTCAAAAATTACTTTTAAATGTAGAAGAAAATAACTGAAACA
TATCATGGCAACTTCAGTGTAAACATCATGGCAATTCATGTGCAATAGACATGGCAAG-TTTAACCAAAAAAAA-TTCGT
CGAAATATATTGATATGAGATCTAGTTTCGAAGA
>chr5D_2673
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---------------------------------TTCGGAAAAACTAACGCCCACACGTGTGGGCATTTGCACATCGCCCA
CACGCCTCCATCACCACTCATTTTGCCACTTATGAATAGATGACATCAGCAGAAATCTTTTTGGTTTTCAGCTTAAAAAT
GTTTTATCTCCTAATTAAAAAAGCGAATTAAAAATCCGTTTTCACCATGAAATCCGTCTCGACGAGATCTTCAAAACTAG
ACCCCATGTTGATTTGTTTCGATGAAATTTTTTTTTGCCCAGAAGTTGCCATGATGTTTACACTGTAATTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTTGATGATGGCAATTCCAGTAC
TTTGACCATGAAAATATTTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGGCAATTTTAGTTTATGGTGCT
TGGCAAGTCTAGTTTCTTAATTCCCCGTTTTATAATATGTTAAAATTTACTTTTAAATGTAAAAGAAAATAGCTGAAACA
TATCATGGCAACTTCAGTGTAAATATCATGGCAATTCATGTGCAATAGACATGGCAACTTTTAACCAAAAAAAA-TTCGC
CGAAATATATCGATATGAGATCTAGTTTCGAAGA
>chr6D_2673
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---------------------------------TTCGGAAAAACTAACGCCCACATGTGTGGGCGTTTGCACATCGCCCA
CACGACTCCATCATCACTCATTTTGCCACGTATGAACATATGACATCAGCAGAAATCTTTTTGGTTTTCGGCTTAAAAAT
GTTTTATCTCCTAATTAAAAAAGCGAATTAAAAATCCGTTTTCACCATTAAATCTGTCTCGACGAGATCTTCAAAACTAG
ACCCCATGTTGATATGTTTCGACGAAATTTTATTTTGCCCAAACGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGTCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTCGATGATGGCAATTCCAGTAC
TTTGACCATGAAAATATTTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTGTCATGGCAATTTTAATTTATGATGCA
TGGCAAGTCCAGTTTCTTAATTCCCTGTTTTATAACATGTCAAAATTTACTTTTAAATGTAGAAGAAAATAGCTGAAACA
TATCATGGCAACTTCAGTGTAAACATCATGGCAATTCATGTGCAATAGACACGGCAACTTTTAACAAAAAAAA--TT-GT
CGAAATATATTGATATGAGATCTAGTTTCGAAGA
>chr7D_2675
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-----------------------------------CGGAAAAACTAACGCCCACACATGTGGGCGTTTGCACATCGCCCA
CACGCCTCCATCACCACTCATTTTGCCACGTATGAATAGATGACATCAGCAGAAATCTTTTTGGTTTTTGGCTTAAAAAT
GTTTTATCTCCTAATTAAAAAAGCGAATTAAAAATCCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAG
ACCCCATGTTGATATGTTTCGACGAAATTTTTTTTTGCCCAGAAGTTGCCATGATGTTTACATTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGGCAATTTTAGTTTTTTTATGATGGCAATTCCAGTAC
TTTAACCATGAAAATATTTTTTTGTATGAACCATGGCAATTTTAAATGCATGTATCATGGCAATTTTAGTTTATGGTGCA
TGGCAAGTCTAGTTTCTTAATTCCATGTTTTATAATATGTTAAAATTTACTTTTAAATGTAAAAGAAAATAGCTAAAACA
TATCATGGCAACTTCAGTGTAAATATCATGGCAATTCATGTGCAATAGACATGGCAACTTTTAACCAAAAAAAA-TTCGC
CGAAATATATCGATATGAGATCTAGTTTCGAAGA
>chr3D_2675
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-----------------------------------CGGAAAAATTAACGCCCACACGTGTGGGCGTTTGCACATCGCCCA
TACACCTCCATCACCACTCATTTTGCCACGTATAAACAGATGACATCAGCAGAAATCTTTTTGGTTTTCGGCTTAAAAAT
GTTTTATCTCCTAATTAAAAA-GCGAGTTAAAAATCCATTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAG
ACCTCACGTAGATATGTTTCGACGAAAAAAAAT-TTCTCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGATCATGACAATTTTAGTTTTTCGATAATGGCAATTCCAGTAC
TTTGACCATGAAAATATTTTTT-GTATGAACCATGGCAATTTTAAGTGCATGTATCATGGCAATTTTAATTTATTGTGCA
TGGCAAGTTTAGTTTCTTAATTCCCCGTTTTATAATATGTCAAAATTTACTTTTAAATGTAGAAGAAAATAGCTGAAACA
TATCATGCCAACTTCAGTGTAAACATCATGGCAATTCATGTGCAATAGACACGGCAACTTTTAACCCAAAAAAATTTCGT
CGAAATATATTGATATGAGATCTAGTTTCGAAGA
>chr1A_2675
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-----------------------------------CGGAAAAACTAACGCCCACACGTGTGGGCGTTTGCACATCGCCGA
CACACCTCCATCACCACTCTTTTTGCCACGTATGAACAGATGACATCAGCAGAAATCTTTTTGGTTTTCGGCTTAAAAAT
GTTTTATCTCCTAATTAAAAAATCGAATCAAAAATCTGTTTTCACCGTTAAATCCATCTCGACGAGATCTTCAAAGCTAG
ACCCCATGTTGATATGTTTCGACGAAAAAAAAA-TTGCCTAAAAGTTGCCATCATGTTTACACTGTAGTTGCCATAGTGC
TTAAACTAAAGTTGCCATGTGGCAATTTTAGTTTGTAGAGCATGGCAATTTTAGTTTTTTTATGATGGCAATTCCAGTAC
TTTGACCATGAAAATATATTTTTGTATGAACCATGGCAATTTTAAGTGCATATATCATGGCAATTTTAGTTTATGGTGCA
TGGCAAGTCTAGTTTCTTAATTCCCCGTTTTATAATATGTCAAAATT-ACTTTTAAATGTAGAAGAAAATAGCTGAAACA
TATCATGGCAACTTCAGTGTAAACACCATGGCAATTCATGTGCAATAGACATGGCAACTTTTAACAAAAGAAAA-TTCGT
CGAAATATATTGATATGAGATCTAGTTTCAAAGA
>SNPs
------------S----------------------------------------S--S--------S---S----------
---S-----S---S--------S----------------S---S--SS------S------------S----------S-
---------------------------------------S--------SS----------S------------------S
----------S------------------------------------------S-----SS------S------------
--S---------------------------------S-----------S-------------------------------
-----------------------S--------------------------------------------------S-----
-------S------------------------------------------------------------------------
S-----------------------------------S----S--------------------------------------
--------------------------------SSSS--------------------------------S-----------
-----------------------S-SSSSSSSSSS------------------S-----S-----------S--------
-----------------------------------------------------------------------------S-S
----------------S-------------------S---------SS----S--S--S-S-------------------
------------------------------S--------------------------------------------S----
----S-------------------------------------------------------S-SSSSSSSSSSSSSSSSSS
SSSSSS---------------------------S------------SS-SS-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------SSS-S--SSS-SS------S-------------SSS------------------S----SSSSSSS
SSSS-S-SSS--SS------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SSS--------------S-------------------S--------------------
---------------------------------------------SS--S----------------------------S-
------------------------------S-----------------------S------------S-----S------
--------------------S---------------------------------------------------SSS-----
------S-----------S-------S---S---S------------------------------------S--------
----------------------S--S---S---------S----------------------------------------
--------------S------S---------S------------------------------------------------
------------S---------------------S---------------S----------S----------S-------
--------------------------------------------------------------------------------
--S------------------------S-S------------------------------------S-------------
---------S-------------------------------------------------------------S--------
-----------------------------S-------S---------SS-SSS-----------S--S--SS--------
-S----------------S---------SS-------S-------S----------------------------------
----------S--------------S----------------SS--SSS-S-----------------------------
--------------------------------------------------------------------------------
-----SSS-------------------------------S----S-----------------------------------
-S-----S-S------------S----S----S----------S--------S--S------------------------
--S--S-------------------S------S-------SSS----S--------------------------------
---------------S--------------------------------S-------------------------------
--------------------------------S-----------------------------------------------
---------------S--------------------------S-----------------S---------------S---
-----------------------------S----------------------------------------------S---
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S----S-S---------------------S---------------------------S------S---------------
--S---------------------S---------
>forward_300
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------AATTCGTGAGGCAGTGGCTT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_1839
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GT
GGTGGACGAGCTTTCACT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_941
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------AGTAACACCTGGCACAACCG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2291
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGACCTGTACACCTTGAGC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_2031
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------ACATGCAGCTTAACGCACAC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGTGGACCGGATATATGCTGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
