>input_sequence_54806
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---------------------------------------------------------------ATGGCCGCGAGCAAGCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCAGAGGTCTTCCTCGCCGCGGACGACGCGTCAGGCGAGC
TCTTCGCGGTCAAGTCCGCGAC---GGCGGCGTGCGCCTCGGCTCTTAAGAGGGAGGAGGGCCTCATGGCCTGCCTGCAC
TCCCCGTGCGTCGTCTCCTGCCTCGGCGGCCGCAGCGCGCGCGATGGCTCCTACCACCTCTTCCTCGAGTTCGCCCCCGG
TGGCTCGCTGGCGGACCGGGTGGCCAGCAACGGGGGGCTCGACGAGCGCGCCGTCCGCGGGTACGCGTCCGACGTGGCGG
CCGGGCTCGCGTACCTTCACGGCGCCGGGATGGTGCACGGGGACGTCAAGGCGCGCAACGTCGTGATAGGCGCCGACGGC
CGCGCCAAGCTCGCGGACTTCGGGTGCGCCAGGAAAGTG---GGCGCTGGCGTGCCGATCATCGGCGGCACGCCCGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGATGCACGGTCGTCGAGA
TGGCAACCGGCCGCGCCCCGTGGAGCGGCATGGACGGCAACGCGCTCGCGGCGCTGCACCGGATCGGCTATACGGAGGCA
GTTCCTGAGCTGCCCCAGTGGCTGTCCGCTGAGGCCAAGGACTTCCTGGGCGGGTGCTTGGTCAGGCAGGCCAGCGACCG
GTGCACGGCGGCGCAGCTCCTGGAGCACCCGTTCTTGGCCTCCGCCG---TGGTCG---ACGCGAAGCCGCAAGCCACGG
AGAGC------AA------------GTGGGTGTCGCCCAAGAGCACGCTGGACGCGGCATTCTGGGAGTCGGAGTCAGAC
ACCGAGGAGGCGGAGCACGACA---------GCACGGCCGAGAGCAGGATCAGAGCATTGGCCTGCCCCGCCTCGGCGCT
CCCGGACTGGGACTCCGAGGAGGGCTGGATCGGCGTGCTCTCCGCGCCAACCGAGGCACCCGACGCAGTGCCCGTGCCGG
CCAAGGAGTCGACCGTCATCATCGCGGACGA---CGCTATCACAA---GTGAAGAAGGATCGGTA---GATGCAGAGTCC
GGCTTTCTGGACATTTCCGTTGACGTAGAGCACAGCAGCAGCTTCCTCACCGCAGGAGATGCATCTGAGGATGACGC---
---------AGTCGGGGGCAGCACTGGCAGCGATCAGTTTTTGAAGGGTTTAGTTTCTTGCCGATTAGTGTCATGTA---
AATTGTTACTAGTACAAACAGTACTACTCCCTCCGATCCAAATTATTTGTCGCAGCTTTAGTACAACTTTGTACTAA---
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>chr1B_1_TraesCS1B01G385200
GGGAGCTGGCCGGCGTCGAGGACGTGCCTACATATGCACGGGGAATCGAATATTCGTCCATTTTTTTTGAATACAAATAT
TCTTCCAATTTCAGGCCGCCTATTCCGATGT------GGGGAACGGCGCGTACGATGCCGCGGACGAGGAGACGCGCGCG
AGATATTTACTGGGAATC-TTCTCTCCGGTTCTACGTCGAGGAGCCACCCGCGTCC----------ACGACGAGCTTTCT
TTCCCGGCGACGAAAGGGAACTTT-CCCGGTGAACCGTAACCAGCTGTGAAATTCGACGGATCGCGCCTGTGAACCAGCT
GTGAATTTTTCCTCCGGGGTAAAAA-AAACTGGGGTCGGGACGTCGCTAAGATTAGTTCAGAAATGATCGTTGCTGCCGC
GTTCAGGAGTATTTCCGTCCGTCTTGGTTCTAG-ATGGATGTTGGGGGCAGGCAGGCGCACACGCAACAGTCCGGTGGCG
CCGCACCATAATACAATTGAG--------------AGTGGGCTGCGGCCGTGGACTTGCCATGCCACAGTCACAGTGGCA
AACGACCAACCGAGGAGA-CCTCCCATAATCCT-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGCTCAAACCACTCGCGCCATTAGAT-------------AAGTC
GGCCCGGGATGCGAGAGATTTGACACGGTTTTATGGTTTTCCTATTCGGACACGAGATTATTAGACGC-GG--A--GCAA
GAAGAGGCTGAGCGCGAAGCTTGGTCAGGTCAAG--CCC-----GGACCGCGCGTTCCCACCCACAATCACAGGAG----
-----------------GGACGC---CGCCGCCGCGAGCGCGTGC-------CGAGACGCGAAGCAGCTTGCTTCCCACG
CCTTTTC-------------CTAATCCGG------CCCCCACATGTCAAACACTTTCACCATGTTCCAAACTTCTCTTCT
CC----CCAAGTA-----------------------CAAGGCT-----CCCTATATATACACAGCACGCCCGCCAAAAAA
A----GA--A----CCCATCAACAATTCGGCA------CAAGCAAGCTCGCCAACACAGAGTACCAATAGCAACCACCAC
A-----A---------------TCGCGATTCCGAGCACA-GATTACAGAAGAG-AAGACGCCGATGGCCGCGAGCAAGCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCAGAGGTCTTCCTCGCCGCGGACGACGCGTCAGGCGAGC
TCTTCGCGGTCAAGTCCGCGAC---GGCGGCGTGCGCCTCGGCTCTTAAGAGGGAGGAGGGCCTCATGGCCTGCCTGCAC
TCCCCGTGCGTCGTCTCCTGCCTCGGCGGCCGCAGCGCGCGCGATGGCTCCTACCACCTCTTCCTCGAGTTCGCCCCCGG
TGGCTCGCTGGCGGACCGGGTGGCCAGCAACGGGGGGCTCGACGAGCGCGCCGTCCGCGGGTACGCGTCCGACGTGGCGG
CCGGGCTCGCGTACCTTCACGGCGCCGGGATGGTGCACGGGGACGTCAAGGCGCGCAACGTCGTGATAGGCGCCGACGGC
CGCGCCAAGCTCGCGGACTTCGGGTGCGCCAGGAAAGTG---GGCGCTGGCGTGCCGATCATCGGCGGCACGCCCGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGATGCACGGTCGTCGAGA
TGGCAACCGGCCGCGCCCCGTGGAGCGGCATGGACGGCAACGCGCTCGCGGCGCTGCACCGGATCGGCTATACGGAGGCA
GTTCCTGAGCTGCCCCAGTGGCTGTCCGCTGAGGCCAAGGACTTCCTGGGCGGGTGCTTGGTCAGGCAGGCCAGCGACCG
GTGCACGGCGGCGCAGCTCCTGGAGCACCCGTTCTTGGCCTCCGCCG---TGGTCG---ACGCGAAGCCGCAAGCCACGG
AGAGC------AA------------GTGGGTGTCGCCCAAGAGCACGCTGGACGCGGCATTCTGGGAGTCGGAGTCAGAC
ACCGAGGAGGCGGAGCACGACA---------GCACGGCCGAGAGCAGGATCAGAGCATTGGCCTGCCCCGCCTCGGCGCT
CCCGGACTGGGACTCCGAGGAGGGCTGGATCGGCGTGCTCTCCGCGCCAACCGAGGCACCCGACGCAGTGCCCGTGCCGG
CCAAGGAGTCGACCGTCATCATCGCGGACGA---CGCTATCACAA---GTGAAGAAGGATCGGTA---GATGCAGAGTCC
GGCTTTCTGGACATTTCCGTTGACGTAGAGCACAGCAGCAGCTTCCTCACCGCAGGAGATGCATCTGAGGATGACGC---
---------AGTCGGGGGCAGCACTGGCAGCGATCAGTTTTTGAAGGGTTTAGTTTCTTGCCGATTAGTGTCATGTA---
AATTGTTACTAGTACAAACAGTACTACTCCCTCCGATCCAAATTATTTGTCGCAGCTTTAGTACAACTTTGTACTAAAGC
TGCGACAATTAATATGGATCGGAGGGAGTACTGTTTTGCAACATAATCATCAATGCAATCGATTTCGTTCTTGCACAAAC
AGTTTTCCTGCT-----------------------------CCGCGCCGCTCCTCTGTTTCACCG--------------T
GCTCCCCGTTGCAACT----------------------------------------------------------------
--------------------GATTGATCGGCAAATTCGGAGGAAAATTAGGTCACAGAAACAAACAAACAAACAAACAGT
AAGTAGCAGCACGTCGCGTGCCCGTGACTCCGGCGGAGGAAAGGAAGTCCGGCGTGGATTCAGAGCTTGCGCGCCACGCC
GCCGCACGCTGAACCTTCCACCGCGGAAAGGCTCGGGTCGACGCGGAAAGCGCAGCGTCACTGCGGGCGTAC--T---GC
TCGAATGGATCGTCGACACAAAGTGCCGCCGCACGGTCAAAAACCTCTTGTGTTT------T-ACGTGGGTCCGGCAGAT
GGAGTCGACGGCCGACGAGCGA----AAGCGAGTCAAGGA----AGCGCCCCGTCCAGAGATTGCTTCGCCGGGT-----
--GGAGATGGAAACAGCCACGAGCGCCACCACC-------------------CCTCCGGTGTCGTCTCGCCGCGCACTGG
GACTCGTCGACTCGCCGTGCGCTTCTGGATGGCGTGTCGGCTGTGCCCCGGCGCGGTCTTTTTTTTTTTTGAGTGGGTGT
GCCAGCGCAGTCGACACGTCGACACGTACCCC-CACACC------ATGCTCCGCGATGCATGTTT---------------
----CTAGACTGATGAGAACTGGCAGGCAAGTGCTTATCTGTTTCTCTGTTGAG--------------------------
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---------TTAGTCCACA-------------------------------------------------------------
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----------------------------------------------------------CGGCACACGGCACACGGCACGC
AGGGCACGAGGACAAACACGATGTA-AAAAGAGCAGCCGATTCATGCCGGTGGCGTCGGTGCGTGAAGGCCGGCGATCAC
CGGGCTGTCCCTACGCCAAGCCGTACGCGCGACCGGAACCTGCTCTCACATGGGCAGATGGAGCGCATATTCTGTTTTCT
TTGGACTTAGTCCAAGATATTTGTAAAC---ATTTTTAATAATCTGGCTATTATTCTATTTGTTGTACTAGTAT-
>chr1D_99
--------------------------------------------------------------------------------
------------------CCTATTCTGATGT------GGGGAATGGCGCATATGATGCCGCGGACGAGGAGACGCGCACG
AGATATTTACTCGGAATTTTTCCCTCCGGTAGGCGGACGAGGAGCCACCCACGTTCAAGGCCGTCCACGACGAGCTTTCT
TTTCCGGTGACGAAAGGGAACTTT-CC-GGTGAACCGTAACCAGCTGTGAAATTGGAGGGGTCGCGCCTGTG-ACCAGCT
GTGATTTCTTGCTTCGGGCTAAAGAGAAACTTGGGTCGGGACGTCGCTTACATTCTTTCAGAAATGAT--------CCGC
GTTGAGGAGTATTTCCGTCAGTCTTGTTCTAGATATGGATGCTGGG----GGCAGGTGCACACGGAACAGTCCGGTGGCG
CCGCACCATAATGCACAGTACAGTACAGTGCAGTGCAC---CTGCGGGGGTTGACTTGGCATGCCACAGTCACAGTGGCA
AACGACCAACCCAGGAGA-CCCAACTGGCCAAATACCAAC-------------------ACCTCCAGCCCCGATTCGTTT
ACACACACACACACACACGCGG----------ACACACCTCATCTCGCCACGAGCGACCAAGACTTTGACAACTATAGCT
GGTAGCAA-ATTTCACCTTCCAAGAATCCTCGGCTGAGCTCAAAACACTGGCGCCATTAGATAGAATCCGAGAGGAAGTC
GACCCGGGATGCGAGAGATTTGACACGGTTTAATGCTGTTCCCATTCGGACACGAGATTATTAGGCGC-GG--A--GCAA
GAAGAGGCTGAGCGCGAAGCTTGGTCAGGTCATG--CCCGGACCGGACCGCGCGTTCC------CACTCGC----G----
-----------------GGAGGA---CGCCGCCGCGAGCGCGTGC-------CGAGAACCTAAGCAGCTTGCTTCCCACA
CCTTTTCGCTTCTGGATTTCCTAATCCGG------CCCCCACACGCCAAACAATTTCACCATGTTCCAAACTTTTCTTCT
CC----CCAACTA-----------------------CAAGG--------CCTATATATACACAGCAGACCCGCCAAAGAA
A----GA--A----CCCATCAACAATTCAGCA-AGCTCGAGA-------------ACAGAGTACCAGCAGAAACCACGAC
A-----A---------------CCCCAATTCGCAACGCA-CACAAGATCAAGATG--------------GCGAGCAAGCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCCGAGGTGTTCCTCGCCGCGGACGACGCCTCCGGGGAGC
TCTTCGCGGTCAAGTCCGCCAC---GGCGGCGTGCGCCTCGGCTCTTAAGAGGGAGGAGGGCCTCCTGTGCTGCCTGCGC
TCCCCGCGCGTCGTCTCCTGCATCGGCGGCCGCGCCGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCGGG
AGGCTCGCTGGCGGACCGGTCGGCGATCGACGGGGGGCTCGACGAGCGCGCCGTCCGCGGGTACGCCGCAGACGTGGCGG
CCGGGCTCGCGTACCTTCACGGCGCCGGGATGGTGCACGGGGACGTCAAGGCCAGGAACGTCGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCGGACTTCGGCTGCGCGAGGAAAGTG---GGCGCTGGCGTGCCGATCATCGGCGGCACGCCCGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGCTGCACGGTCGTCGAGA
TGGCCACCGGCCGCGCCCCGTGGAACGGCATGGACGGCGACGCGCTCGCCGCGCTGCACCGGATCGGGTACACGGAGGCC
GTCCCAGAGGTGCCCCAATGGCTGTCCGCCGAGGCCAAGGACTTTCTGCGCGGGTGCTTGGTCAGGCATGCCAGCGACCG
GTGCACCGCGGCGCAGCTCCTGGAGCACCCGTTCTTGGCCTCCGCCG---TGGTCG---ACGCGAAGCCGCAAGCCATGG
AGAGC------A------A------ATGGGTGTCGCCCAAGAGCACGCTAGACGCGGCATTATGGGAGTCGGAGTCCGAC
ACCGAGGAGCCGGAGCAGGACA---------GCA---CCGAGAGGAGGATCAGAGCATTGGCCAGCCCTGCCTCGGCGCT
CCCGGACTGGGACTCGGACGAGGGCTGGATCGACGTGCTCTCCGCGCCAACCGAAGCAGCGGACGCAGTTGCCGTGCCGA
CCAAGGAGACGACTGGCATAACCGTGGACGA---CGGGATCACAA---GTGAAGAAAAATCAGTA---GATGCAGAGTCC
GGCTTTCCCGACATTGCCGTTGACGTAGAACACAGCAGC---TTCCTCAACGGAGGAGATGCATTTGAAGACGATCC---
---------AGTAGGGCACCGTAGGCATT---ATCAGTCTTTGGAGAATTTAGCTTCTCACCAACCGATGTCATGTA---
AATTGTTACTAGTACAAACAGTACT-------------------------------------------------------
--------------------------------GTTTTGCAACATAATC------------GATTTCGTTCTTACACAGCC
AGCA-TCCCGCT-----------------------------TCGCGCTGCTCCTCTGTTTTTTTCTCAGCTCATACTTCT
GCTCCCCGTTGCGACGTGCAGTAACTAACAGCTCATACTTC-------------------AACTCGAAGAACAATTAGGT
--TGTACTCC----GAATCCGATGGATCGGCAAATTCGGGGGAAAATTAGGTCAC----------------GCATGCAGT
AACTAACAGCACGTGGCGTGGCCGTGACTCGGACGGAGGAAAGGGAATCCAGCGTGGATTCAGAGCTTGCGCGCCACGCC
GCCGCACACTGAATCTTCCACCGCGGAAAGACTCGGGTCGACGCGGAAAGCGCAGCGTCACTGCAGGCGTGC--TACTGC
CCGAATGGATCGTCGACACAAAGTGCCGCCGCACGGTCAAAAACCTTTTTA-AGC------T-ACGTGGGTCCAGATGAT
GGAGTGGACGGCCGACGAGCGA----AAGCGAGTCAAGGA----AGCGTCCCGTCCAGAGATTGCTTCGCCGGCT-----
--GGAGATTCATCCA---------GCCACCACT-------------------CCTCCGGCGTCCTCTCGCCGCGCACTGG
GACTCGTCGACT-GCCGTGCGCT------------------TGTGCGCCGGCGCCGTC--TTTTTTTTTTGAGTGGGTGT
GCCAGCGCAGTCGACACGT--------ACCTC-CACACC------ATGCTCCGCGATGCATGTTTTCTAGACGAGTGACT
CTTTCTAGAGTGATGAGAACTGGCAGGCCCGTGCTTATCTGTTTCGCTGTTGAG--------------------------
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---------TTAGTCCACA-------------------------------------------------------------
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----------------------------------------------------------CGGCAC-------ACGGCACGC
AGAGCACAAGCACAAACACGATGTG-AAAAGAGCAGCCGATTCATGCCGGTGGCGTCGGTGCGTGAAGGCCCGCGATCAC
CGGGCTGTCCCTACACCAAGCCGTACGCGCCA-CAGAACCGGTGCTCACATGGGCAGATGGAACGCATATTCTGTTTTCT
TTGGATTTGGTCCAAGATATTTATAAAATATATTTTTAATAATCTTGATATTATTCTAT----------------
>chr1D_99
--------------------------------------------------------------------------------
------------------CCTATTCCGATGTCTGCAAGGGCAACGGCGCATACGATGCCGAGGGCGAGGAGACACGCGCC
AGATATTTACCCGGAATC-TTCTCTCCGGTACTACGTCGAGGAGCCACCCGCGT----------CCACCACGAGCTTTCT
TTCCCGGCGATGAAAGGGAACTTTCCC-GGTGAACCGTAACCAGCTGTGAAATTGGAGGGATCGCGCCTGTG-ACCAGCT
GTGAATTCTTGCTTCGGGCTAAAGAGAAACTGGTGTCGGGATGTCGCTC-------------------------------
----AGGAGTATTTCCGTCGGTCTTGGTTCTAG-ATGGATGTTGGGGGCAGGCAGGTGCACACGAAACAGTCCGGCGGCG
CCGCACCATATAATA---TACAGTACAGTGGGTGCAGTGCACTGCGTCGGTGGACTTGGCATGCCG------CAGTGGCA
AACGACCAACCGAGGAGATCCCAACTGGCCAACTCCGCTCCCTTCAGGTGCGCCCGCTGACTTCCACCCCCGATAAGTTT
ACACACGCGGACCCATCACAATACTGTGTTTCACACACCTCGTCTCGCTATGAGCGACCAAGACTTTGACAACTATACCG
CTCACAAAGATTGCACCTTCCAAGAATAATCGGCTGAGCAAAAAACACTCGCACTTTAATGG------------------
------------------TTTGACACGGTTTAATAGTTTTCCTATTCGGACACGAGATAATCTGACGC-GG--G--CTAG
GCAGAGGCGCAGCGCGAAGCTTGGTCAGGTCAAG--CCC-----GGACCGCGCGTTCC------CACTCATAGAAG----
-----------------GAATCC---CGCCGCCGCGAGCGCGTGCTCGTGCTCGAGGGCCTAAACAGCTTTCTTCCCACG
CCTTTTTGCTTCCGGATTTACTAATCC---------C-------------CACACACGCCATGTTCTAAACCTTTCTTAT
TCTCCACAAGTGCAAAGCCTTCCTTTCTCCCCCCTCCCCGT--------CCTATATATACGCA---CACCCGCCAAAAAA
A----GAGAA----CCCATCATCAATTCAGCA-GGCCACAAGCAAGCTCGACAACAGAGT------------ACCAACAC
CAACCACAACA----------ACCCCAATTTGCAACGCA-CATAAGATCAAGATG--------------GCGAGCAAACA
ATGGACGCGGGTGCAGACGATCGGCCGCGGCGCGTCGGGGGCCGAGGTCTTCCTCGCGTCGGACGACGTGTCGGGCGAGC
TCTTCGCGGTCAAGTCCGCCAC---GGCAGCGTGCGCCTCAGCTCTTAAGAGGGAGGAGGACCTCATGTCCTGCCTGCGC
TCCTCGCGCGTCGTCTCCTGCATCGGCGGCCGCGCCGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCGGG
AGGCTCGCTGGCGGACCGGGCGGCGATCGACGGGGGGCTCGACGAGCGCACCGTCCGCGGGTACGCCGCAGACGTGGCGG
CCGGGCTCGCGTACCTTCACGGCGCCGGGATGGTGCACGGGGACGTCAAGGCCAGGAACGTCGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCGGACTTCGGCTGCGCGAGGAAAGTG---GGCGCTGGCGTGCCGATCATCGGCGGCACGCCCGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTTGGCTGCACGGTCGTCGAGA
TGGCCACCGGCCGCGCCCCGTGGAACGGCATGGACGGCGACGCGCTCGCCGCGCTGCACCGGATCGGGTACACGGAGGCC
GTCCCAGAGGTGCCCCAATGGCTGTCCGTCGAGGCCAAGGACTTCCTGCGCCGGTGCTTGGTCAGGCAGGCCAGCGACCG
GTGCACGGCGGCGCAGCTGCTGGAGCACCGGTTCTTGGCCTCCGCCG---TGGTCG---ACGCGAAGCCGCAAGCCGTGG
AGAGC------A------A------ATGGGTGTCGCCCAAGAGCACGCTGGACGCGGCATTCTGGGAGTCGGAGTCAGAC
ACCGACGAGGCGGAGCACGACA---------GCGCGGCCGAGAGGAGGATCGGAGCATTGGCCTGCCCTGCCTCGGCGCT
CCCAGAGTGGGACTCCGACGAGGGCTGGATCGACGTCCTATCCGC---------ACCAACGGAAGCAGTTGCCGTGCCGG
CCAAGGAGACGACCGTCATCATCGTGGACGA---CGCGATCACAA---GTGAAGAAGAATCAGTA---GATGCAGAGTCC
GGCTTTCTCGACATTGCCGTTGACGTAGAGCACAGCAGC---TTCCTCCACGCAGGAGAAACGTACGAGGCTGATCC---
---------AGTCGT------TAGGCATT---GTCAGTTTTTGAAGAGTTTTGTTTCTGGCCAATTAGTGCCATGTA---
GTAAATTGTTAGTGCAAACAGTACT-------------------------------------------------------
--------------------------------GTGTTGCAACATAATCACTGATGCAATCGAATTCGTTGTTACACAAAC
AGTA-TCCTGCT-----------------------------TGGCGCTGCTCCTCT-TTTTTGTCTCCGCTCATAATTCT
GCTCCCCATTGCGACGTCA--------------------------------------ACGAATTCAAAGAAAAATTAGGC
TGTGTCCGCC----GAATCCGATGGGTCGACAATTTCGGGGGGAAATTAGGTCAC----------------ACATACAGT
AACTAACAGCACGTGGCGTGGT------------GGAGGAAAGGAAATCCAGCGTGGACACAGAGCTCGCGCGGCACGCC
GCCGCACGGTGAATCTTCCACCGCAGAAAGGCTCGGGTCGACGCGGCAAGCGCAGCGTCACTGCACTGCAGGCGTACTGC
TCGAATGGATCGTCGACACAAAGTGCTGCCGCACGGTGAAAAACCTATTGT-TTT------T-ACGTGGGTCCAGCAGAC
GGAGTGGACGGCCGACGAGCGA----AAGCGAGTCAAGCA----AGCGTCCCGTCCAGAGATTGCTTCGCCGGGT-----
--GGAGATGGAAACAGCCACGAGCGCCACCACC-------------------CCTCCGGTGTCCTCTCGCCGTGCGCT--
-----------------------TGTGGATGGCGTGTCGGCTGTGCGCCGGCGCAGTCTTTTTTTCTTTCGAGTGGGTGT
GCCGGCGCAGTCGACACGT--------ACCCC-CAAACC------ATGCTCC-----GCATGTTT---------------
----CTAGACTGATGAGAACTGGCAGGCTAGTGTTTATCTGTTTCTCTCATGAG--------------------------
--------------------------------------------------------------------------------
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---------TTAGAGCAACTCTAGCAGATCCCGCATTTTGCCGACCCGTAAAATGTGTTTGCAGGTCGCACGGGGGCGAT
TATGCAGGCCGAAAATTGCGGCGGTGGACTAGAAACCGCAAACGGACCCCTAAAATTTAAAAAAAATTGTTTCGTGCGAG
AAATTTAAACAACAGCTCGCCGGAGCTCGCGAGCATACATGGTTCTTCTTCGCATAAATAAGTTCATACACACCACATAC
ATACATAGAGGTTAGATATGCTAGACAGGGCCTACGCTACCGCATCACTGCAACAAAATTGAGCTCACCGGAGCTCCTGC
GGTAGCTGCCCACCGGCGGCGATCAGTCGGAGTCGGAGCCGAGGTCGACGAAGAGCTTCGCCTGCTCCTCCTTCATCACG
CGCAGGTCGGCCTCCTTCGATGCATGCGCCAGCGATGCCGTGAGGCCCGAATCGAGGAAGAGCCGCTCGTACTCGAGTTC
GCGCCGGATGCGCTCTTCCATCTCCTCCTGATCCCTCGCCGACCGCTCTAGGACGACGCGCTCGAGGAGCTCCTCCTGCC
CCGGTGGGAGGTAGTCCTCGGGTCCGATGACGCCTCGGCGCGGCGGCGCATCGGGCACGGCCTCCTCCGGCTCCCTCTTC
ACCGGAACGAGCCGCGAGCTCGATGCGCCCGCGGATGAGCTCCCCGCGGACCAGTGGCCGGATGAGCTCCCCGCGGACCA
GTTGCCAGAGGAGGCGCGGCGGCGACGGGCGCGCTCGAGCTCGTACTCGTCGAGCTCGTGCCGGTCGAATGCCGGCGGCG
GCCGGGCACCGTGGTTGAGCCACCGACGCGCCCCCCGCTTGCGCGCGGTGTCAGATCCGGCGCGGCGGCGGCGCTCCGCC
TCATTCCCCGAGTCGGCCATGGTGGTTCAAGGCTCGCCGGCGGCGAGAAATCGAGCGGCGCGGTGGGGAATTGGAGGGGA
ACGCGGCGGCGGGAGGATAGGGTTTCGACCCGCATCTGCCCCGCAAACCCACAGTTATAGTGCCTCGGGGGTTGCGTTTG
CGGGCTGCGGCAAAAAAAATTACGAGCCGGACACCGATGCGAGCTCTGGTCTGACCAGAGAAATGAGCCGAGCCCGTATA
ATCGCCGGAATTATGCGGGTTTGCGCCAGATGCGGGGTCTGCTAGAGTTGCTCTTAGTCGGCAT-------GCCGCATGC
AGAGCACAAGGACAAACACGATGTAAAAAAGTGAAGCCGATTCATGCCGGTGGCGTCGGTGCGTGAGGGCCGGCGATCAC
CGGGCCGTCCCTACACCAAGCCGTACACGCGACCGGAACCTGCTCTCACATGGGCAGATGGAGCGCATATTCTGTTTTCT
TTGGATTTGGTCCAAGATATTTATAAAC---ATTTTTCATAGTCTAGGTATTATTCTGCTTGTTGTACTAGTAT-
>chr1A_585
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---------------------------------------------------------------------------AAGTC
GACCCGGGATGCGAGAGATTTGACACGGTTTAATGGTTTTCCTGTTCGGACACGAGATTATGAGACGC-GG--G--GCAA
GAAGAGGCTGAGCGCGAAGCTTGGTCAGGTCATG--CCC-----GGACCGCGCGTTCC------CACCCACAGT------
----------CACAGGAGGACGC---CGCCGCCGCGAGCGCGTGC-------CGAGAGCCTAAACAGCTTGCTTCCCACG
CCTTTTCGCTTCTGGATTTCCTTTCCTAACCCGTCCCCCCACACGCCAAACACTTTCGCCATGTTCCAAACTTTTCTTCT
CT-----------------------------------CCTACCCCTAAACCTATATATACGCG---CACCCGCCACAAAA
A----GA--AGGAACCCATCAACAATT---------CACAAGCAAGCTCGACAACAGAGT------------GCCAACAG
A-----AACAACCCCATCCCGATCCCAATTCGCAACGCA-GA------------------GCGATGGCCGTGGGCAAGCA
ATGGACGCGGCTGCGCACGCTCGGCCGCGGCGGCTCGGGGGCTGAGGTCTTCCTCGCCGCGGACGATGTGTCGGGCCAGC
TCTTCGCGGTCAAGTCCGCGAC---GGCGGCGTGCGCCTCGGCTCTTAAGAGGGAGGAGGGCCTCATGTCCTGCCTGCGC
TCCCCGCGCGTCGTCTCCTGCATCGGCGGCCGCGACGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGCGGACCGGGTGGCCAGCAACGGGGGGCTCGACGAGTGCGCCGTCCGCGGGTACGCCGCTGACGTGGCGG
CCGGGCTCGCGTACGTTCACGGCGCCGGGATGGTGCACGGGGACGTCAAGGGCAGGAACGTGGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCGGACTTCGGGTGCTCTAAGAAAGCG---GCCGCCGATGGTCCGATCATCGGCGGCACGCCGGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGCTGCACGGTCGTCGAGA
TGGCCACAGGCCGCGCCCCGTGGACCGGCATGGACGGCAACGCGCTCGCCGCGCTGCACCGGATCGGGTACACGGAGGCC
GTGCCCGAGGTGCCCGAGTGGATATCCGCTGAGGCAAAGGACTTCCTGCGCGGCTGCCTGATCAGGCAGGCCAGCGGCCG
GTGCACGGCGGAGCAGCTGTTGAAGCATCCGTTCTTGGCCGCCGCCG---TTGACG---GCGCGAAGCCACAAGCCGTGG
AGAGC------A------AAAGCAAATGGGTGTCGCCCAAGAGCACGCTGGACGCGGCATTCTGGGGGTCGGAGTCAGAC
ACCGAGGAGGCGGAGCACGACA---------GCACGGCCGAGAGGAGGATCGGAGCATTGGCCTGCCCTGCCTCGGCGCT
CCCGGACTGGGACTCCGACGAGGGCTGGATCGACGTGCTCTCCGCACCAACCGAAGCAGCGGACGCAGACGCCGTGCCGG
CCAAGGAGACGACTGGCATCATCGCAGGCATTATCGCGATCACAA---GTGAAGAAGAATCAGTACTAGATGCAGAGTCG
GGCTTTCCCGACATTGCTGTTGACGTAGAGCACAGCAGGAGCTTCCTCGACGCAGGAGAAGCATATGAGGCTGATCC---
---------AGTCGT------TAGGCATT---ACCAGTTTTTGAAGAGTTTAGTTTCTGGCCAATTAGTGTCATGCACTT
GTAAATTATTAGTGCAAAGAGTACT-------------------------------------------------------
--------------------------------GTTTTGCAACATAATCACTGATGCAATCGAATTCGTTGATACACAAAC
AGTA-TCCCGCT-----------------------------TGGCGCCGCTCCTCT-GTTTTG--TCCGCTCATACTTCT
GCTCCCCATTGCTACGTGATAATGATGGGTTCACCCGAAAAAAAAAGATAATGATTGACGATTTAAAGGAAAAATTAGGT
TGGACTTGGAATTAGAATCAGATGGATCGGCAAATTCGGAGGAAAATTAGGCCACACGACCAGTA---------------
AACTAGCAGCACGTCGCGTGGCCGTGACTCGGACGGAGGAAAGGGAGTCCAGCGTGGACTCAGAGCTTGCGCGCCACGGC
GCCGCACGGTGAATCTTCCACCGCGGAAGGGCTGGGGTCGACGCGGAAAGCGCAGCGTCACTGCAGGCGTAC--TACTGC
TCGAATGGATCGTCAACACAAAGCGCTGCCGCACGGTCAAAAACCTCTTGT-TTT------T-ACGTGGGTCCAGCAGAC
GGAGTCGACGGCCGACGAGCGAGCGAAAGCGGGTCAAGGA----AGCGTCCCGTCCACAGATTGCTTCGCCGGGTCACGG
GTGGAGATTCATCCA---------GCCACCACT-------------------CCTCCGGTGTCCTCTCGCCGCGCACCGG
GACTCGTCGACTCGCCGTGCGCTTGTGGATGTCGTGTCGGCTGTGCGCCGGCGTAGTCTTTTTGTTTTTT--GTGGGTGT
GCCAGCGCAGTCGACACGT--------ACCCC-CTACACTCGTGGATGCTCCGCAATGCATGTTT---------------
----CT---CTGATGAGAACTGGCAGGCTCGTGCTTATCTGTTTCTCTGCTGAG--------------------------
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---------TTAGTCCACA-------------------------------------------------------------
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----------------------------------------------------------CGGCAC-------ACGGC----
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---------------------------------------------------------------------------
>chr1B_598
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--------ATGCGAGAGATTTGACACGGTTTTTGCCTTTTCCGGCTCCGCTACGAGATTAATTTACGC-GG--ATAGTAA
GAATAGGCGGATCGCTAAGCTTGGTCAGGTCAAG--CCC-----CGCCCGAGCGTTCC------CACTCACCGC------
----------CCAACCCTAT--C---CGCCGCCGTGGGCGCGTGC-------CGAGACCCGAAACAGCTTGAATCCCACG
CCTTTTCGCCA--GGATTTTCTAGTCC---------CCGCACACGCCAAATGCCTT--CCATGTTCTAAACTTGCAATCT
CC----TCAACTTTTCCTCTCCACAAGTACTCCTTCCAAGT--------CCTATATATACACG---CACCCGCCAAAAAA
A----GA--A----CCCATCATCAATTCAGCA-GGCCACAAGCAAGCTCGACAACAAAGAGTGCCAACAGAAACCACAAC
A-----A---------------TCCCACAGAAGG------------------------TGGCGATGTCCGTGAGCAAGCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCCGAGGTGTTCCTGGCGGCGGACGACGCCTCGGGGGAGC
TCTTCGCGGTCAAGTCGGCTAG---CGCGGCTTGTGCGGCGGCGCTGAGGAGGGAGCAGCGGGTGATGGCCGGCCTGAGC
TCCCCGCGCGTTGTCTCCTGCATCGGCGGCCGCGGCGCCCCCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGCCGACCAGATGGCGACA------GGCCTCGACGAGCTCGCCGTCCGCGGCTACGCGGCCGACGTGGCGG
CCGGGCTCGCGTACCTTCACAGCGCCGGCATGGTGCACGGGGACGTCAAGGCGCGCAACGTCGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCCGATTTCGGCTGTTCGAGGAAGGCT---GGCGCTGACGTGCCGATCATCGGTGGCACGCCGGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGAGCCCAGCGGCCGACGTCTGGGCGCTCGGCTGCATGGTTGTCGAGA
TGGCCACTGGACGCACGCCGTGGAGCGGCATGGACGGCGACGCGCTGGCCGCGCTGCACCGGATCGGCTACACGGAGGCC
ATGCCCGAGGTTCCCGAATGGTTGTCTGCCGACGCGAAGGACTTCTTGGCCAGGTGCCTTGTCAGGCAGGCCAGCGATCG
GTGCACGGCGGCGCAGCTGCTGGAGCACCCGTTCTTGGCCTCCGCCG---TCGTCG---AGGCGAAGGCGCAAGCCGTGG
AGAGC------A------A------ATGGGTGTCCCCCAAGAGCACGCTGGACGCCGCATTCTGGGAGTCGGATTCAGAC
ACCGAGGAGGCGGAGCACGACA---------GCTCGGCCGAGACGAGGATCAGGGCACTGGCCTGCCCCGCCTCGGAGCT
CCCGGACTGGGACTCGGACGAGGGATGGATCGACGTGCTCTCCTCGCCAACCGGAGCAACCGGCGCAGTGCCCGTGGTGG
TCGAGGAGATGACCG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>chr1B_606
--------------------------------------------------------------------------------
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----------------GATTTGACACGGGTTTTGCCTTTTCCGACTCCTAAACGAGGTTATTTTACGC--G--G--GTAA
GAATAGGCGGAGCGCTAAGCT-----TGGTCAAG--CCC-----CGTCCGCGCGTCTC------CACTCACATGCCCGTC
CATCCATGGCCACCGGAGGACGC---CGCCGCCGCGAGCGCGTGC-------CGAGACCCGAAGCAGCTTGCTTCCCACG
CCTTTTCGCTTCTGGATTCCCTAATCC---------CCGCACACGCCAAATGCCTTCACCATGTTCTAAACTTTTCTTCT
CC----CAAGTACAAAGCCTTCCTTTCTTCCCTCCTCCCTACCCCTCAACCTATATATACGCA---CACCCGCCGAAAAA
A----G-GAA----CTCAGCAACAATTCAGCTTGGGCACAAACAAGCTCCACAACAGAGT------------ACCACCAC
A-----A---------------TCTCAATTCCTAACACG-GATTACAGAAGCG-AAGGCGACGATGGCCGTGAGCAAGCG
ATGGACGCGGGTGCGCACGCTTGGCCGCGGCGCGTCGGGGGCCGAGGTCTTCCTCGCCGTGGACGACGCCTCGGGCGAGC
TCTTCGCGGTCAAGTCGGCGAG---CGCAGCTTGCTCGGCGGCGCTGAGGAGGGAGCAGCGTCTCATGTCCGGCCTGCAA
TCCCCGCGCGTGGTCTCCTGCATCGGCGGCCACGGCGCCCGTGATGGTTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGCGGACCGGGTGGCGATCGACGGGGGCCTCGACGAGCGCGCCGTCCGCAGCTACGCGGCCGACGTGGCGG
CCGGGATCGCGTACCTCCACGCCACCGGGATGGTGCACGGGGACGTCAAGGCGCAGAACATTATGATCGGCGCCGACGGC
CGCGCCAAACTCGCGGATTTCGGGTGCGCGAGGGTGGCACAAC------GCGGGCCGATCATCGGCGGCACGCCGGCGTT
CATGGCGCCGGAGGTGGCGCGAGGCGTGGAGCAGGGCCCCGCTGCCGACGTCTGGGCGCTCGGTTGCATGATCGTAGAAA
TGGCCACCGGCCACGCGCCGTGGAGCGGCATGGACGGTGACGCTCTGGCGGCGCTGCACCGGATCGGGTACACAGAGGCC
GTCCCAGAGGTGCCGCAATGGCTGTCCGCTGAGGCCAAGGACTTCCTGCGCGGGTGCTTGGTCAGGCAGGCCAGCGACCG
GTGCACGGCAGAGCAGCTCCTGGAGCACCCGTTCTTGGCCGCCGCCGGCGTCGTCG---ACGGGAAGCCGCAAGCCGTGG
AGAGC------AAAAGCAA------ATGGGTGTCGCCGAAGAGCACGCTGGACGCGGCATTCTGGGAGTCGGAGTCAGAC
ACCGAGGAGGCGGAGCACGACA---------GCACGGCCGGGAGGAGGATGGGGGCATTGGCGTGCCCTGCATCGGCGCT
CCCGGACTGGGACTCGGACGAGGGATGGATCGATGTGCTCGCGGCACCAACCGCAGCACCCGACGCAGTTCTGGTGGCGG
CCGAGGAGACGGCTGAACT------GGACGA---CGCGATCACACCATGTGAAGAAGA------------------GTCC
GGCGTTGTCGACG---CCATACTCGTGCAGTATGGCAGC---TTCGTCAACGCAGGAGAGGCCTACGATGATTCAGTCCA
GCAAAG------------TTGTAGGC------ATCAATTTTTGGAGGATTTAGTTTCTCATCACGGGATATCATGTACTA
CTATCAAATTGT------------T-------------------------------------------------------
--------------------------------ATTTTGCAACAAAAATACTAATGCAATTGATTTCGTTCCTGCACAT--
---------------------------------------GCTCGCACTGCTCCTCT-TTTTCACCGATCATACA-----G
TACTCCGTTATTACGACACGTTCGACT-----------------------------------------------------
----------------------TGGATTAGCAAATCAGGTGGAAA-----------------------------------
-----------------------------------------------TCCAGCGTAAATTCGCAGCTT------------
------------------------GGCCGCCACGGCGCACCCCGATGCTTCCA---------------------------
--CCACAGAAAGT--------ACTGCCGCAGCACAGTAAAAAATCTCTTGT-TAAGCTACAT-ACGTGGGTCCAGCA---
-GAGTCGACGGCCGACGAGCGA----AAGCGAAACCTTTTCGACAGCGTCGCGTCGAGGGATTGCTTCGCCAGGT-----
--GGAGATCCATCCA---------GCAACGAGCACCCGGCCTCCTCCGCCGACCGCCGGTGTCCTCTCGCCGCGCACT--
----CGCCGACTCGTCGTGCGCTTGCGCTTCTGGGTCGTGTGTCT-----------------------------------
---------GTCGACACGT--------ACCGCGCACACC------ATGCTCCGCGATGCATGTTT---------------
----CTAGACTGATGACAACTG----------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1D_641
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------ACGAGAATTTTTGACGCAGG--G--ATAA
GCGGAGGCAGAGAGCGAAGTTTGGTCTGGTCAAG--CCC-----AGACCGCGCGTTCC------CACTCACCGT------
----------CCAACCCAAT--CCATCGCCGCCGCGAGCGCGTGCT------CGAGAACCTAAACAGCTTGCTTCCCACG
CCTTTTCGCTTCGGGATTTCCTATCTTTT------ATCGCGCACGCCAAACACCTT--CCATGTTCCAAACTTGCAATCT
CC----CCAACTTTTCCTCTCCACATCAACCTA------------------TATATATACGCT---CACCCGCCACAAAA
AA--GGA--A----CTCGTCAACAATTCAGCTTGGACACAACCGAGTTCCATC----AG-----CAACAGAAGCCACCAC
A-----A---------------TCCCAATTCCCAAGACA-GATTACACAAGAG-AAGACGACGATGGCCGTGAGCAAGCA
ATGGACGCGGGTGTGCACGCTCGGCCGCGGCGCCTCGGGGGCCGAGGTCTTCCTGGCCGCCGACGACGCCTCCGGGGAGC
TCTTCGCGGTCAAGTCCGCCGTGGGGGCGGCTTGCGCGGCGGCTCTCAGGAGGGAGCAGAGGGTGATGGCCGGCCTGAGC
TCCCCGCGCGTCGTCTCCTGCATCGGCGGCCGCGGCGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGCGGAGCAGGTGGCGAGCAGCGGTGGCCTCGACGAGCGTGCCGTCCGCGGCTACGCGGCCGATGTGGCGG
CCGCGCTCGCGTACCTCCACGGCGCTGGGATGGTGCACGGGGACGTCAAGGCGAGGAACGTCGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCGGATTTCGGGTGCTCGAGGAAGGCG---GCCGCTGGCGGGCCGATCATCGGCGGGACGCCAGCGTT
CATGGCGCCGGAGGTGGCGCGTGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGCTGCATGGTTGTCGAGA
TGGCCACTGGACGCGCCCCGTGGAGCGGCATGGACGGCGACGCGCTCGCGGCGCTGCACCGGATTGGCTACACGGAGGCC
GTTCCCGAGGTGCCCCAATGGTTGTCCGCTGAGGCTAAAGACTTCTTGGCCAAATGCCTTGTCAGGCAGACCAGCGAGCG
TTGCACGGCGGCGCAGCTCGTGGAGCACCCGTTCTTGGCCTCCGCCG---ACATCG---GCGCGAAGCCAGAAGCCGTGA
AGAGC------AA------------GTGGGTGTCGCCCAAGAGCACGCTGGACGCGGCATTCTGGGAGTCGGAGTCCGAC
ACCGAGGAGGCGGAGCACGACA---------GCGCGGCCGAGAGGAGGATCAGAGCATTGTTCTGCCCTGCGTCGGCGCT
CCCGGACTGGGACTCGGACGAGGGCTGGATCGACGTGCTCTCCGGGCCAACGGAAGGAGCGGACGCAGTTGCCGTGCCGG
CCAAGGTGACGACTGGCATCATCGTGGACGA---CGCGATCACCA---GTGAAGAAGAGTCACTC---GACGCAGAGTCT
GGCGCTGTCGACATTACTGTGGACGTGGAGCACAACAGC---GTGCTCAACGCAGGACAAGAAGCAAACGATGATGATGA
TTCAGCAGTAGTAGGGCACTGTAGGC------ACCAGCCTTTGGAGATTATAGCTTCTCACCAATTAGTGTCGTGTA---
AATTGTTACT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr1A_642
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------CGAGATAATTTGACGC-GTGTG--GTAA
GAATAGGAGGATCGCTCAGCTTGGTCAGATCAAGCCCCC-----CGCCCGCGCGTTCC------CACTCACCGC------
----------CCAACCCCAT--C---CGCCGCCGCGGGCGCGTGC-------CGAGACCCGAAGCAGCTTGCTTCCCACG
CCTTTTCGCCTCTAGATTTCTTAGTCC---------CTGCACACGCCAAATACCTT--TCATGTTCTAAACTTGCAATCT
CT----CCAACTTTTCCTCTCCACAAGTACTCCTTCCCCGT--------CCTATATATACACA---CACCCGCCAAAGAA
AAAGGGA--A----CCCATCAACAATTCAGCA-GGCCACAAGCAAGCTCGACAACACAGAGTGCCAACAGAAACCACCAC
ATCCCGA---------------TCCCAATTCGCAACGCA-GAGTAAAG------AAGATGGCCGTGTCCGTGGGCAAGCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCCGAGGTCTTCCTGGCCGCCGACGACGCCTCCGGGGAGC
TCTTCGCGGTCAAGTCGGCGAG---CTCGGCTTGCGCGGCGGCGCTGAGGAGGGAGCAGTGCATCATGTCCGGCCTGCGC
TCCCCGCGCGTCGTCTCTTGCATCGGCGGCCGCGGCGCCCGTGACGGCTCCTACCAGCTCTTCCTCGAGTTTGCCCCCGG
CGGCTCGCTGGCCGACCGAGTGGCGATCCACGGGGGCCTCGACGAGCGTGCCCTGCGCGGCTACGCGGCCGATGTGGCGG
CCGGGCTCGCGTACCTCCACGGCGCCGGGATGGTGCACGGGGACGTCAAGGCGCGCAACGTCGTCATCGGCGCCGATGGC
CGAGCCCAGCTCGCAGATTTTGGGTGCGCGAGGAAGGCGGGAGCCGGTGGCGGGCCGATCATCGGCGGCACGCCGGCGTT
CATGGCGCCCGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGCTGCATGGTTGTCGAGA
TGGCCACTGGACGCGGGCCGTGGAGCGGCATGGACGGCAACGCGCTCGCGGCGCTGCACCGGATCGGCTACACGGAGGCC
GTGCCCGAGGTTCCCGAATGGCTATCCGCCGACGCGAAGGACTTCTTGGCCAGATGCCTTGTCAGGCAGGCCAGCGGCCG
GTGCACGGCCGAGCTGCTGCTGGAGCACCAGTTCCTGGCCTCGGCTG---CCGTCG---ACGCGAAGCCGCGAACCATGG
AGGGC------A------A------ATTGGTGTCGCCGAAGAGCACGCTGGACGCAGCATTCTGGGAATCGAATTCAGAC
ACGGATGAGGCGGAGCACGACA---------GCTCGGCCGAGATGAGGATGAGGGCATTGGCCTGCCCTGCCTCGGCGCT
CCCGGACTGGGACTCCGAGGAGGGATGGATCGATGTGCTCGCCGCGCCAACTGAAGCACCCGACGCAGTGCCCCTG----
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr1D_728
--------------------------------------------------------------------------------
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------------CAGGAGGACGC---CGCCGCCGCGAGCGCGTGC-------CGAGACCCGAATCAGCTTGCTTCCCACG
CCTTTTCGCTTCTGGATTTCCTAAGCC---------CAGC---------ACACGCC--ACATGGTCTAAACTTTTCTCCT
CC----CAGTTACAAAGCCTTCCTTTCT--------------T-----CCCTATATGTACGCA---CACCCGCCAAAAAA
A----GA--ATCGAACTCA----------------------------TCGACAACAGAG-----CACCAGAAACCACCAC
A-----A---------------TCCCAATTCCCAGCACA-GATTACACAAGAG-AAGGCGACGATGGCCGTGAGCAAGCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCCGAGGTCTTCCTGGCCGCCGACGACGCTTCCGGGGAGC
TCTTCGCGGTCAAGTCCGCCGCGGGGGCGGCGTGCGCGGCGGCGCTGAGGAGAGAGCAGCGTCTCATGTCCGGCCTGCGC
TCCCCGCGCGTGGTCTCCTGCATCGGCGGCCGCGGCGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGCGGACCGGGTGGCGAGCAACGCGGGGCTCGAGGAGCGCGCCGTCCGCGGCTATGCGGCCGACGTGGCAG
CGGGGCTCGCGTATCTCCACGGCACCGGGATGGTGCACGGGGACGTCAAGGCGCGCAACGTCGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCCGATTTCGGGTGCGCGAGGGAGGCC---TCCACGAGCGGACCGATTATCGGTGGCACGCCGGCGTT
CATGGCGCCAGAGGTGGCGCGCGGCGAGGAGCAAGGCCCCGCGGCCGACGTCTGGGCGCTAGGCTGCATGGTTGTCGAGA
TGGCCACCGGCCACGCGCCGTGGAGCGGCATGGACGGTGACGCTCTGGCCGCGCTGCATCGGATCGGGTACACGGAGGCC
GTCCCGGAGGTGCCTCAATGGCTGTCCGCTGAGGCCAAGGACTTCCTGCGCGGGTGCTTGGTCAGGCAGGCCAGCGACCG
GTGCACGGCGGCGCAGCTCCTGGAGCACCCGTTCTTGGCGTCCGCCG---TCATCGTAGACGCGAAGCCTCAAGCCGTGG
AGAGCAAAAGCA------A------ATGGGTGTCGCCCAAGAGCACGCTGGACGCGGCATTCTGGGAGTCGGAGTCAGAC
ACCGACGACGCGGAGCACGAGA---------GCACGGCCGAGAGGAGGATGAGGGCATTGGCCTGCCCTGCCTCGGCGCT
CCCGGACTGGGACTCGGACGAGGGATGGATCGATGTGCTCTCCT------------CACCTGAAGCAGCTCCGGTGGCGG
CCGAGGAGACGGCTGACCT------GGACGA---CGCGATCACACCATGTGAAGAAGAAGCAAGC---AGCGCAGAGTCC
GGCGTTCTTGACG---CTGTACTCGTGGAGTGTAGCAGC---TTCGTCAACGCGGGAGAGGCCTGCGATGATTCAGTCCA
GCAAAGTTGTAG------TACTAGGC------ATCAGTCTCTGGAGGATTTAGTTTCTCATCACGGGTTATCATGTACTA
CTGCTAAATTGT------------T-------------------------------------------------------
--------------------------------GTTTTGCAACAAAAATACCAATGCAATTGATTTCGTTCCTGCACATCA
AAACCTTCTGCTCGCTCCCTCAAAAAAAAAAAACCTTCTGCTCGCACTGCTAGTCT-TTTTCACCCATCATAGATCATCG
TACCCCGTTATTACGACACGTTGGACT-----------------------------------------------------
----------------------TCGATTAGCAAAATCGGTGAAAA-----------------------------------
-----------------------------------------------TCCAGCGTAAATTCGCAGCTT------------
------------------------GGAAAGGCACGAGTCGACGCGGAAAGCACAGCGGACGTACCGGACGAGAAAGGACG
CTCCACAGAAAGT--------ACTGCCGCCGCACAGTCAAAAATCTCTTGT-TTAAGCTACACACGTGGGTCCAGCA---
-GAGTCGACGGCCGACGAGCGA----AAG-------------------------------ATTGCTTCGCCAGGT-----
--GGAGATGCATCCA---------GCAACGAGCACCCGGCCTCCTCCGCCGACCGCCGGTGTCCTCTCGCCGCGCACT--
----CGCCGACTTGTCGTGCGCTTGCACTTCTGGGTCGTG----T-----------------------------------
---------GTCGACACGT--------ACCGCGCACACC------ATGCTCCGCGATGCATGTTT---------------
----CTAGACTGATGA----------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1D_862
--------------------------------------------------------------------------------
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-----------------------------------------CT-----ACCTATATATACACT---CACCCGCCACAAAA
AA--GAACTCATCGCCGGCACC------------GCCACAAGCAAGCTCGACACAACAGA------------AACCATCG
C-----A---------------TCCCAATTGCCACCGCCGGAGGAGAGAAAAG-AAGACGACCATGTCTGTGAGCAAGCA
ATGGACGCGGGTGCGGACGCTCGGCCGCGGCGCGTCGGGGGCAGAGGTGTTCCTCGCGGCGGACGACGCCTCCGGGCAGC
TCTTCGCGGTCAAGTCCGCCGTGGGGGCAGCGTGCGCGGCGGCGCTCAGGAGGGAGCAGATGGTGATGGCCGGCCTGAGC
TCCCCGCGCGTCGTATCCTGCATCGGCGGCCGCGGCGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGTGGAGCAGGTGATGAGCAACGGGGGCCTCGACGAGCGCGCCGTCCGCGACTACGCGGCCGATGTGGCGG
CCGCGCTCGCGTACCTCCACGGCGCTGGGATGGTGCACGGGGACGTCAAGGCGAGGAACGTCGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCGGATTTCGGCTGCGCGAGGAAAGTG---GGCGCCGGCGTGCCGATCATCGGCGGCACGCCCGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGATGCACGGTCATCGAGA
TGGCCACCGGCCGCGCCCCGTGGACCGGCATGGACGGCAACGCGCTCGCCGCGCTGCATCGGATCGGGTACACCGAGGCT
GTTCCCGAGCTGCCCCAATGGCTGTCCGCTGAGGCGAAGGACTTCTTGGCCAGATGCCTTGTCAGGCAGGCCAACGACCG
GTGCACGGCGGCACAGCTGCTGGAGCATCCGTTCTTGGCCGCCGCCG---TCGTCG---ACGCGAAGGCAGAAGCCGTGG
AGAGC------A------A------ATGGGTGTCGCCGAAGAGCACGCTGGACGCGGCATTCTGGGAGTCAGAGTCCGAC
GCCGACGAGGCGGACGACGAGCCGTCGCACGGCGCGGCCGAGAGGAGGATCAGCGCATTGGCCTGCCCTGCTTCGGCGCT
CCCGGACTGGGACTCGGACGAGGGATGGATCGACGTGCTCTCCGGGCCGACGGAAGCAGCGGACGCAGTTGCCGCGCCGG
CCAAGGAGAGGACTGGCATCATCGTGCACGA---CGCGATCACCA---GTGAAGAGGAGTCGATC---GGCGCAGTGTTC
GGTGCTCTCGACATTACCGTGGACGTGGAGCACGGCAGC---GTGCTCAACGCAGG------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr1B_953
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCACCAC
A-----A---------------TCCCTGTTCCCAACTCA-GATTACACAAGAGAAAGACGACGATGGCCGTGAGCAATCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCTGAGGTGTTCCTCGCGGCGGATGACGCCTCCGGGGAGC
TCTTCGCGGTCAAGTCGGCGAG---CGGGGCGTGCGCAGCTACGCTGAGGAGGGAGCAGTGCCTCATGTCCGGCCTGAGC
TCCCCGCGCGTCGTCTCCTGCATCGGCGGCCGCGGCGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTCGCCGACCGGATGGCGAGCAGCGGGGGCCTCGACGAGTGCGCCGTCCGCGGCTACGCTGCCGACGTGGCGG
CCGGGCTCGCGTACCTCCACGGCGCTGGGATGGTGCACGGGGACGTCAAGGCGAGGAACGTGGTGATCGCCGCCGACGGC
CGCGCCAAGCTCGCGGATTTCGGGTGCGCCAGGGAGGCG---GGCGCTGACGTGCCGATCATCGGCGGCACGCCGGCTTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCGCGGCCGACGTCTGGGCGCTCGGCTGCATGGTTGTTGAGA
TGGCCACCGGCCGCGCCCCGTGGAGGGGCATGGACGGCGATGCGCTCGCCGCGCTGCATCGGATTGGGTACACGGAGGCC
GTTCCTGAGGTCCCCCAGTGGCTATCCTCGGAGGCCAAGGACTTCTTGGCCAGGTGTCTTGTCAGGCAGGCCAACGATCG
GTTCACGGCGGCGCAGCTGCTGGAGCATCCGTTCTTGGCTGCCGCCG---TTGTCG---ACGGGAAGCCGCAAGCCGTGG
AGAGC------A------A------ATGGGTGTCACCAAAGAGCACGCTGGACGCGGCATTCTGGGTGTCGGAGTCCGAC
ACCGACGAGGTGGACGACGAGCCGTCGCACGGCGCGGCTGTCAGCAGGATCAGAGCATTGGCCTGCTCTGCCTCGGCGCT
CCCGGACTGGGACTACGACGAGGGCTGGATCGACGTGCTCTCCGGGCCAACGGAAGCCCCT------GTCGCCGCGCCGG
CCAAGGTGACGACTGGCATCATCGTGGACGA---TGCG---ACCA---GTGAAGAGGAGTCAATC---GACGCAGAGTTC
GGCGCTCTCGACATTAGCGTGGACGTGGAGCACAGCAGC---GTGCTCAACGCAGGACAAGAAGCACACGATGATGATTT
G------GTCGTAGGGCATAGTAGGC------ATCAGCCATTGGAGATTCTACTTTCTCACCAATTAGTGTCATGTA---
AATTGTTAC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1A_954
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------CACCAC
A-----A---------------TCCCAATTCCCAACACC-GATTACACACGAG-AAGACGACCATGGCGGTCAGCAAGCA
ATGGACGCGGGTGCGCACGCTCGGCCGCGGCGCCTCGGGGGCCGAGGTCTTCCTCGCCGAGGACGATGTGTCCGGCGAGC
TCTTTGCGGTCAAGTCCGCCGTGGGGGCGGCGTGTGCGGCGGCGCTGAGAAGGGAGCATATGGTGATGGCCGGCCTGAGA
TCCCCACGCGTCGTCTCCTGCATCGGCGGCCGCGGCGCCCGCGACGGCTCCTACCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGCGGAGCAGGTGGCCAGCAGCGGGGGCCTCGACGAGCACGCCGTCCGCGGCTACGCGGCCGATGTGGCGG
CCGCGCTCGCGTATCTCCACGCCACCGGGATGGTGCACGGGGACGTCAAGGCGAGGAACGTCGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCGGATTTTGGGTGCGCTAGGGAAGCC---GCCGCCGGCGGACCGATCATCGGTGGCACGCCAGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGACCCGCGGCCGACGTCTGGGCGCTCGGCTGCATGGTTGTTGAGA
TGGCCACCGCACGCGCCCCGTGGAGCGGCATGGACGGCGACGCGCTCGCCGCGCTGCACCTGATCGGGTACACCCAGGCC
GTTCCCGAGCTGCCCCAATGGCTGTCCGCTGAGGCCAAGGAATTCTTGGCCAAGTGCCTTGTCAGGCAGGCCAGCGACCG
GTTCACGGCGGCGCAGCTGCTGGAGCATCCGTTCTTGGCCGCTGCCG---TTGTCG---ACGCGAAGCCGCAAGCCGTGG
AGAGC------A------A------ATGGGTGTCGCCCAAGAGCACGCTGGACGCGGCATTCTGGGAGTCGGAGTCTGAC
ACCGACGAGGCGGACGACGAGCCGTCGCACGGCGCGGCCGAGAGGAGGATCAGCGCATTGGCCTGCCCTGCGTCGGCGCT
CCCCGACTGGGACTCCGACGAGGGATGGATCGACGTGCTCTCCGGGCCAACGGAAGCAG---------TTGCCGTTCCCG
CCAAGGTGACGTGTGGCATCATCGTGGACGA---CGCGATCACCA---GTGAAGAGGAGTCAATC---GACCCAGAGTCC
GGTGCTCTCGACATTACCGTGGACGTGGAGTACAGCAGC-----------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr1B_985
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------AGAAAAC-AAGACGACCATGTCTATGAGCAAGCA
ATGGACGCGGGTGCGGACGCTCGGCCGCGGCGCGTCGGGGGCAGAGGTGTTCCTCGCGGCGGACGACGCTTCGGGCGAGC
TCTTCGCGATCAAGTCCGCCGTCGGGGCGGCGTGCGCGGCGGCGCTCAGGAGGGAGCAGATGGTGATGGCCGGCCTGAGC
TCACCGCGCGTCGTATCCTGCATCGGCGGCCGCGGCGCCCGCGACGGCTCCTATCAGCTCTTCCTCGAGTTCGCCCCCGG
CGGCTCGCTGGCGGACCAGGTGGCGAGCAACGGGGGCCTCGACGAGCGCGCCGTCCGCGGCTACGCGGCCGATGTGGCGG
CCGCGCTTGCGTATCTCCACGGCGCTGGGATGGTGCACGGGGACGTCAAGGCGAGGAACGTGGTGATCGGCGCCGACGGC
CGCGCCAAGCTCGCGGATTTCGGGTGCTCGAGGAAGGCG---GGCGCTGATGTGCCGATCATCGGCGGCACGCCGGCGTT
CATGGCGCCGGAGGTGGCGCGCGGCGAGGAGCAGGGCCCCAGGGCCGACGTCTGGGCGCTCGGCTGCATAGTTGTTGAGA
TGGCCACCGGCCGCGCCCCGTGGAGCGGCATGGACGGCGACGCGCTCGCGGCGCTGCACCGGATCGGGTACACGGATGCC
GTTCCTGAGTTCCCCCATTGGCTGTCCGCGGAGGCCCAGGACTTCTTGGCCAGGTGTCTTGTCAGGCAGGCCAGCGGCCG
GTGCACGGCGGCGCAGCTGCTGGAGCATCCGTTCTTGGCCGCCGCCG---TCATCG---ACGCGAACCCAGAAGCCGTGA
AGAGC------A------A------GTGGGTGTCGCCCAAGAGCACGCTCGACGCTGCATTCTGGGAGTCGGAGTCCGAC
ACCGACGAGCCGTCGCACG------------GCGCGGCCGAGAGCAGGATCAGAGCATTGGCCTGCCCTGCGTCGGCGCT
CCCGGACTGGGACTCGGACGAGGGCTGGATCGATGTGCTCTCCGGGCCAACAGAAGCGCCT------GTCGCCGCGCCGG
CCAAGGTGACGACTGGCACCACCGTGGAGGA---CGTTATCACCA---GTGA----------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr1D_2972
--------------------------------------------------------------------------------
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------------------------------CC-CACAGC------ATGCTCCGCGATGCATGTTT---------------
----CTAGACTAGTGAGAACTGGCAGGCCCGTGCTTATCTGTTTCTCTGTTTGAGTTAGGCATGTACAATGGTTGATAAG
ATAGTCTTATCTTAAGTTTTGCATGTAATTTAGAGATGACAAAAAAATATGTCTATAATGGGTTATCTCTTAGCCTTATC
TTCAATAACTAGTTATTCCTAAAAATAAGGTGAGACAAATTGTGCTAAAAGATCATCTCTTGTCTTCTCTTAAATAAGAG
AAGGCGAGCCTTTTTTTATGATTTCTCTCTCCTCCACCTCATCATCTGTCCTACGTGATATTCTTAAGATAGAACCATTG
TACATGCCCTTAGTCCACG-------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------CGGCAC-------ACGGCACGC
AGAGCACGAGGACAAACACGATGTT-AAAAGAGCAGCCGATTCATGCCGGTGGCATCGGTGCGTCAAGGCCGGCGATCAC
CGGGCTGTCCCTACACCAAGTCGTACGCGCCACCAGAACCTGTTCTCACATGGGCAGATGGAGCGCATATTCTGTTTTCT
TTGGATTTGGTCCAAGATATTTATAA----TATTTTTAATAATCTTGGTATTATTCTATATGTTTTACGTAGTAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-------------------------------S------------------------------
-----------S------------------S-----------------------S-------------------------
---------------------------S--------------------------S--S--------------S-------
-------S--S--S----S----S------------------------S-S---SS------------SSSSSSSS----
---S---------------S------------------------------------S-------S---------------
---------------SSSS-S------------------SS-------S---------S---------------------
---------------------SSS-SSSSSSSS-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
-S------------------------------------------------------------------------------
----------------------------------------------------------SSSSSS--S-------------
----------------------------------------------------------S---------------------
-------------------------------------------S-S---------------------------S------
----------S--------------------------------------------------------S------------
----------------------------S---------------------S----------------S--S---------
------------------------S-S---------------------------------S-------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
------S--------------S-----------S----S-----------------S-----------------------
S------------------------------------------------------------------S------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-----------------------------------------------------------------S--------S
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S---------------------S-------------------------
--------S------------------------------------------------S----------------------
--------S------S---------------------------------S------------------------S-----
----------------SS---S-SSSSSSSSS--------------------------S---S-----------------
-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S------------------------------
---SS------------------------------------S------------------SSS-S---------------
---------------S----------------------------------------------------------------
-----------------------S--------------------------------SS-S--SSSSSSSSS---S-----
--S-----------------S---------S-S-----------------S-----------------------------
-------------S--------------------------------------------------S---------------
---------------------------------------------------S---------------------S------
------------------------------------------------S-------------------------------
---------------------------------------------------------------S----------------
------------------------S---------------------S-------S-------------------------
-------------------SSSSSSSS-----------------------------------------------------
----------------------------S---------------------------------------------------
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----------------------------------------------------------------SSSSSSS---------
--S-----------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----S--S-------------S----------------------S-S---------------------------
>forward_45
-------------------------GCCTACATATGCACGGGGAA-----------------------------------
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>reverse_1577
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--------------------------------------------------------CCTCTTCCTCGAGTTCGCC-----
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---------------------------------------------------------------------------
>forward_497
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-----------------------------------------------------------------------------GCG
CCGCACCATAATACAAT---------------------------------------------------------------
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>reverse_2496
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---------------TCCGTTGACGTAGAGCACAG---------------------------------------------
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>forward_2489
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---------------------------------------------------------------------ATGCAGAGTCC
GGCTTTCTG-----------------------------------------------------------------------
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>reverse_5123
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--GGCACGAGGACAAACACGAT----------------------------------------------------------
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---------------------------------------------------------------------------
