>input_sequence_54726
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------------------------------------------------------------------------TCCATTCC
GCCTCCGTGTCGATAGGTACGTACGTAGGTG--CGTGCGTGCTCGATCTCAATCGACGACCATCGCAATACGTCCGTCAC
AAACTCCTTAGACTCTGGTCCTTCGTACGTGAACGTAGCAGCAACATGCTCGACGTGGCCACCAGAGCAGCCGGCGGGCT
GGCGCGCTCGCTCGTGGTCGCCGCCTTCGGCGCAGGTACGT----GAGGCGCTATAATTTTTGTGTTATAAAGTTTATAT
TAGGATGATAAAATTGACAATTTAGGTATACGCATAGGACTTGTAAAATGAAATGGAGGTAGTGCATTTTTTTCCCGCCA
TAATTAAACGATCTTATGGGGATAGATTAACCGAGGTGCAT-TGTGTGCAGCCGGTACGGTGATCGGCGGCATGCTCGGC
CTCCTGTGGGGCTTCGTCAACCAGGACGGCCTGGTGCAGGGCGTGGTCGTCGGGGCGGTCACCGGGGCCCTCGTCTCCGT
GGAGCTCGCCGACTCCCTCCTCAGGATATGGACCTGCGGCGACTGCTCCATGGACGCGCGCATCAAACGCACGGTACGCT
TCGCAAGCCGCCAAGTTGGAGATTCGATCGTCATTGACCAAGATTGACAATTAATTTTATGGAG-TTCATTTTGCAGCGG
CTGGTGCTCCGGAGCGTGGCGGTCGGCCGCCTCCTGCGCGGCTCGCTGTTCCCGGCCATAAGCGGCGCGCTGGACAGCCA
GATCGAGGCGCTGCAGCAGCACCACTCCTTCCGAGGCGACCTCTTCGAGCCGAGCTCCGGCCCGGTGACGGCCGCGCGGA
GGGCCGCCGTCGAGAGCCTCCCGGCCACGGTGCTCACCAAGGAGACAGCGGGCGCGGGGCAGCACACCACCTGCCCCATC
TGCCTCCATGTCAGTGCTATAGCTAGCTTCTCATCCGAGCCAGTGATGTAGTATAGCGCCAATGT----GCCATTGATTA
GCTGACGAGATGATGTTCTTGTCCTGCTCAGGAGTTCCAGGCCGGCGAGAGCGCCAGGAGGCTGCCGGCGTGCGGCCACG
TG-------TTCCACCTGGCGTGCATCGACAGCTGGCTGCTGTGGAAGCCCCATTGCCCCATGTGCCGCCACGCCGTCTA
CTAGCCTATCCCCCC---------GCCGGGAAACA--AACAAGCAAACGGAGGAACGACGTACGGCGGCGTTGCTGCAGA
TGAAGTGTAGTACGTAGTAGTACATCGGTCTCACGAAGCAGAGGACTATGGAGTCCTCTCTCGTGACGAAAGATAAATTT
TCCCACGAGAAATGTGA-TTTTTGTGT--CGTTGAACAGAAAGAAATTGAAGATGCAAAT--------------------
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>chr5B_1_TraesCS5B01G335400
CCGGACGGGAACAGGGACCACTGGCCGGACATGAGAGAGAAGGAAAAAGCGGTAAAAAGTTGACCAACCAGACCCCTCAA
AGCCTCCTTAAATGGTCGGGTTGTCCGACAACCCCAACCCTCATATTCATCTCATATATGAAATGAGTATGAGGAGCGTC
CGGGCGTGCCCGGTCAGCGGTCCCGCGTCCGCCACATAGGATTAGACCCCCATAGAGCATCTTT-------TTTATTTTT
TTATTTTTTTCTCTCTCTCTCCTTCTCCACCAATTACATGCATGTGCCCGGACATATATAAAGAAAAGTGAGGGACAGGA
TTGCGTGAACGAAAAAATAGGGAATCAAAGTGGACATGCCCGGAACGCTGACCGGGCGCGTCTGCGGGTGTTTGAGGGGC
CAAATTAGTCCGGCTGTAGATGCTCTGATGGCCTCCTCCTCCAAGC----TCCATCCGTACATAGGAACCGCTCGCCTCG
CCGGTCCCCGACGTAGACGCGGAGCGGCCGGGGCGGCGACAAGTTGCTGTCGTCTGGCCGGCGATCGCTCAAACTCGAAC
TTGGACGTACACAGTTGGGTGCAAGGTAGTACATGAGAGGCTGAGAGCACAGGTCGCGCGCATCAACCGCTTCTTCGATT
CTCTGTGCGTCGT--CACTCTAGTCGACGTATACCAATCGGCAAAGCAAATCCCATCCG----T--------GCATGCAT
GCGGCGTGGTCCCGGTCCCGGCCGGGCGGGGCAAAGCGCAACCAACGCCCCCAACCCCCGGCGACGGGGAGAGG-----T
CCTCTCCTGTACCGCTCGTCCGCCCGGTGCCCTCCCTGTGCCGTCGCGCTTGCTTGCTTCAGTACCCTCAGACCAGACGC
CCTC-TTAACTCCATCCGTGCTTGCTTGGGGCCGCCTCGCCCGCCCTCGACGTCGACCGGGAGCGCCCGGAGCAACGACA
TTCCGCTGCCGCGTGTTACTGCACACCACAGGCC-TCCGCATATATATGCGCACGCGTCCGCTATCTTCTCCTCCATTCC
GCCTCCGTGTCGATAGGTACGTACGTAGGTG--CGTGCGTGCTCGATCTCAATCGACGACCATCGCAATACGTCCGTCAC
AAACTCCTTAGACTCTGGTCCTTCGTACGTGAACGTAGCAGCAACATGCTCGACGTGGCCACCAGAGCAGCCGGCGGGCT
GGCGCGCTCGCTCGTGGTCGCCGCCTTCGGCGCAGGTACGT----GAGGCGCTATAATTTTTGTGTTATAAAGTTTATAT
TAGGATGATAAAATTGACAATTTAGGTATACGCATAGGACTTGTAAAATGAAATGGAGGTAGTGCATTTTTTTCCCGCCA
TAATTAAACGATCTTATGGGGATAGATTAACCGAGGTGCAT-TGTGTGCAGCCGGTACGGTGATCGGCGGCATGCTCGGC
CTCCTGTGGGGCTTCGTCAACCAGGACGGCCTGGTGCAGGGCGTGGTCGTCGGGGCGGTCACCGGGGCCCTCGTCTCCGT
GGAGCTCGCCGACTCCCTCCTCAGGATATGGACCTGCGGCGACTGCTCCATGGACGCGCGCATCAAACGCACGGTACGCT
TCGCAAGCCGCCAAGTTGGAGATTCGATCGTCATTGACCAAGATTGACAATTAATTTTATGGAG-TTCATTTTGCAGCGG
CTGGTGCTCCGGAGCGTGGCGGTCGGCCGCCTCCTGCGCGGCTCGCTGTTCCCGGCCATAAGCGGCGCGCTGGACAGCCA
GATCGAGGCGCTGCAGCAGCACCACTCCTTCCGAGGCGACCTCTTCGAGCCGAGCTCCGGCCCGGTGACGGCCGCGCGGA
GGGCCGCCGTCGAGAGCCTCCCGGCCACGGTGCTCACCAAGGAGACAGCGGGCGCGGGGCAGCACACCACCTGCCCCATC
TGCCTCCATGTCAGTGCTATAGCTAGCTTCTCATCCGAGCCAGTGATGTAGTATAGCGCCAATGT----GCCATTGATTA
GCTGACGAGATGATGTTCTTGTCCTGCTCAGGAGTTCCAGGCCGGCGAGAGCGCCAGGAGGCTGCCGGCGTGCGGCCACG
TG-------TTCCACCTGGCGTGCATCGACAGCTGGCTGCTGTGGAAGCCCCATTGCCCCATGTGCCGCCACGCCGTCTA
CTAGCCTATCCCCCC---------GCCGGGAAACA--AACAAGCAAACGGAGGAACGACGTACGGCGGCGTTGCTGCAGA
TGAAGTGTAGTACGTAGTAGTACATCGGTCTCACGAAGCAGAGGACTATGGAGTCCTCTCTCGTGACGAAAGATAAATTT
TCCCACGAGAAATGTGA-TTTTTGTGT--CGTTGAACAGAAAGAAATTGAAGATGCAAATGCTGAACTATACGTACCGCT
CAATTTGTCGTGATGTCTCACTCCTGGAACAGGCAGGGCAGCAGCATTCCTAGAACCGATGGGCGAGAGGCGAACCAACT
CAGTGTGTCGCTGAGAAGGCGAGAGGCGAACGAGATCACATTGATTGAGAACCTAACTAATTAGCCGGGTTACATTACAT
CGCC--------ACCAGGGCGCGCGAAAATGACCACTCCAACAGCTACAGACTCACGAAACCAACTGTG--GTTGGATGG
TTAGCAGGAGGTGGTATCCCCAGCACA-CAGAGTTTAAGTCCTAGACTTTGGTGCTCATAATTTTCTGCAATTATTTTAG
ATCTTCTTACGATGTGTGTTCAGTGAAAGAAGACGTTTTCGTTGACTATGAAAGCGTATGTGACAACTTCATTATTCTTA
A-ATGATGTGCTAGCCCAGTCTCTCGAAAGTGCTCACACGGATAGAGTATGCATGTGTGTGTTCATAGAGATGAGTATAT
AAGTGTCTTTGTCCATACTATGTTAGAAAAGAAAAAGAAAACTATGGGCACCTTTGATTGAAACGAGGTTCATAGGATTT
TTGGAGAACGAGAGTGTTTAAG-TTTTTTTT--ATGTTGGTTATTTGATTCATAG---------------GAAATTGAAG
GATTTCTTTGTACTATTTCTGGTAGGATTTCTAGCATTCTACCTCCAGCCCACTTGAAAGAACAACCC-AAAAAAGCCAC
ACTCTCTAGTGCAGACTAATGCATAGGGCTAGACA---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TACAAACATAAACAAGTAGGCTGAGGAAAAACAGCCCACAA
GCAAC--GCACAATCAGCGCGGGCGATCAAACAGTTTGCACAAAATTTTCATGCTCTTGGTCGTGTAGTAAACTACTTGG
ATGTGACATACTTATTTTCTCATCTAGATGAGAACAAATCCATATTCCAAGTACATATTAACTACTCCCTCCATCCCATA
ATGTAAGACGTTTTTTTGACACTAGTGTACTGTCAAAAAATGTCTTACATTATGAGA
>chr1B_1
CCGGGCGGGTGCGGGGGCCACTGACCGGACATGAGAGAGAAGGAAAAAGGAGTAAAAAGTTGATCAACCGGACCCCTCAA
AGCCTTCTTAAATGGTAGGGCTGTCGGCAG-------CCCTCATATTCATCTCATATATGGAATGAGTATGAGGAGTGCA
TGGGCGTGCCCGGTCAGCGGTCCTGCATCTGTTACATAGGATTAGACACCCATAGAGCATCTTCTTCTTTCTTTATTAGT
TCTTTTCTTTCTCTTTCTTCTTG--TCCACCAATCACATGCATGTGACCAGACATATATAAAGAAAAAGTAAGGACAAGA
CTGTGTGAACGAAAAAA-AGGGAATCAAAGTAAACACGCGTGGGACACTGACCGGGCGCGTCTACGGACGTTTGAGGGGC
CAAATAAGTCCGGCTG--------CTGATGGCCTCCTCCTCCAAGC----TCCATCCGTACATAGGAACCGCTCGCCTCG
CCGG-CCCCGACGTAGACGCGGAGCGGCCGGGGCGGCGACAAGTTGCTGTCGTCTGGCCGGCGATCGCTCAAACTCGAAC
TTGGACGTACACAGTTGGGTGCAAGGTAGTACATGAGAGGCTGAGAGCACAGGTCGCGCGCATCAACTGCTTCATTGATT
CTCTGTGCATCGTCACACTCTAGTCGACGTATACTAATCGGCAAAGCAAATCCCATCCG----T--------GCATGCAT
GCGGCGCGGTCCCGGTCCCGGCCGGGCGGGGCAAAGCGCAACCAACGCCCCCAACCCCCAGCGACTGGGAGAGGTTCTCT
CCTCTCCTGTACTCGTCGTCCGCCCGGTGCCCTCCCTGTGCCGTCGCGCTTGCTTGCTTCAGTACCCTCAGATCAGACGC
CCTC-TTAACTCCATCCGTGCTTGCTTGGGGCCGCCTCGCCCGCCCTCGACGTCGACGGGGAGCGCCCGGAGCAACGACA
TTCCGCTGCCGCGTGTTACTGCACGCCACAGGCCCTCCTCATATATAGGTGCACGCGTCCGCTGGCTGCTCCTCCATTCC
GCCTCCGTGTCGATAGCTACGGACGTACGC--ACGTGCGTGCTCGATCTCCATCGACGACCATCGCAATACGTCCGTCAC
AAACTCTTTAGGCTCTGGTCCTTCGTACGTGAACGTAGCAGCAACATGCTCGACGCGGCTACCAGAGCACCCGGCGGGCT
GGCGCGCTCGCTCGTCGCCGCCGCCTTCGGCGCAGGTACGT----GCGGCCGCACATGATGTTACATTCTTCTC------
--------------------------------------------------------------TGTCTTATTTTTGCGGCA
TAATTAAACGATCTTATGGCGATTGATTAACCGAGGTGCAT-TGTGTGCAGCCGGTACGGTGATCGGTGGCATGCTCGGC
CTCCTGTGGGGCTTCGTCAACCAGGACGGCCTGGTGCAGGGCGTGGTCGTCGGGGCGGTCACCGGGGCCCTCGTCTCCGT
GGAGCTCGCCGACTCCCTCCTCAGGATATGGACCTGCGGCGACTGCTCCATGGACGGGCGCATCAAACGCACGGTACGCT
TCGCAAGCCGCCAAGTTGGAGATTCGATCGCCATTGACCAAGATTGACAATTAATTT-TTGGAG-TTCATTTTGCAGCGG
CTGGTGCTCCGGAGCGTGGCGGCCGGCCGCCTCCTGCGCGGCTCGGTGTTCCCGGCCATAAGCGGCGCGCTGGACAGCCA
GATCGAGGCGCTGTAGCAGCACCACTCCTCCGGAGGCGACATGTTCGAGCCGAGCTCCGGCCCGGTGACGGCCGCGCGGA
GGGCCGCCATCGAGAGCCTCCCGGCGACGGTGCTCACCAAGGAGACCGCGGCCGCGGGGCAGCACACCACCTGCCCCATC
TGCCTCCATGTCAGCACTCAAGCACACCCGCCTCTCTGTTCGTCCGTGAGCACAGCGCAACAAT-------------TTA
ACTGACGAGCTGATGTTCTTGTCCTGCTCAGGAGTTCCAGGCCGGCGAGAGCGCCAGGAGGCTGCCGGAGCTCATGTGGG
ACCTTCTTCTTCCACCTGGCGTGCATCGACAGCTGGCTCCTGTGGAAGCCCCACTGCCCCATGTGCCGCCACGCCGTCTA
CTAGCCTATCCCCCCGCCGCCGCTGCCGGGGAGCA--AACAC----ACGGAGGAACGACGTACGGCGGCGTTGCTGCAGA
TGAAGCGTA----GTGGTAGTACATCGGTCTCACGAAGCAGAGGACTATGGAGTCCTCTCTCGTGACGAAAGATAAATTT
TCCCACGAGAAATGTGA-TTTTTGTGT--CGTTGAACAGAAATAAATTAAAGATGCAAATGTTGAACTATACGTACCGCT
CAATTTGTCGTGATGTCTCGCTCCTGGAACAGGCAGGGCAGCAGCATTCCTGGAACCAACTGTCT---------------
--GTGTGTCGCTGAGAAGGCGAGAGGCGAACGAGATCACATTGATTGAGAACCTAAGTAATTAGCCGGGTTACATTACAT
CGCGACCA---------GGCGCGCGAAAATGACCACTCCAACAGCTACAGACTCACGGAATAAACTGTATAGTTGGATGG
TTAACAGGAGGTGGTATCCCCAACCCATCAGAGTTTAAGTTCTAGACTTTGGTGCTCATAATTTTTTGTAATTATTTTAG
ATCTTCTTACGATGTGTGTTCAATGGAAGAAGACGTTCCCGTTGACTATGAAAACGTATGTGACAACTTCATTAATCTTA
AGATGATGTGCCAGCTCAGTCTCTCGAAAGTGCTCCCAGGGGTAGAATGTGCATGTGTATGTTCATAGGGATAAGTATAT
GAGTGTCTGCGTCCGTACTATGTTAAAAAAGAAAAAGAAAACTATGGACTCCTTTGATTGAAACGAGGTTCATAGGATTT
TTGGAGAATGAGAGTGCTTAAGATTTTTTTT--ATGTTGGTTATTTGATTCATAGAATTAAACCCTATAGGAAATTGAAG
GATTTCTTTGTACTATTTCTGGTAGGATTTCTAGCATTCTACCTCCAGCCCGCTTGAAAAAACAACCCCAAAAAAGCCAC
TCTACTTAGTGCAGACTAATGCATAGGCCCAGACACAGTGGCGGAGCTACGGCAAGGCCGAATTGGCCGGGGCCCACCCA
GCCCATATGATTTTCCTGCAGTATGTACGTATTTTTGACCAATAAAACACAACCCTAGAGTAATTTCTTATAGCCGGCCC
ACCCAGATTTCTGGGCCAAGCTCCGCCACTGCCTAGACATACAAACAAAAACAAATAGGCTGAGGAAAAACAGCCCACAA
GCAACCCGCACAATCAGCGGGGGCGATCAAACAGTTTGCACAAAATTTTCAGGCTCTTGATCGTGTAGTAAACTACTTAG
ATGTGACATACTTTTTTTCTCATCTAGATGAGAACAAATCCATATTCCAAATACATATCAACTACTCCC-----------
---------------------------------------------------------
>chr5A_424
GCCTGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------CTCCTCCAAGCTCTATCC----GTACATAGCAGAGACTCGCCTCG
CCAGTCCCCGACGTAGACGCGGAGCGGCCAGGGCGGCGACAAGTTGCTGTCGTCTGGCCGGCGATCGCTCAAACTCAAAC
TTGGACGTACGTAGTTGGGTGCAAGGTAGTACTACA-----TGAGAGCATAGGTCTCGCGCATCCACTGCTTCTTCGATA
CTCTCTGCATCGTCCC--TCTAA------------AATCGGCAAAGCGAATCCCATTCCCATCCGTGCACGCGCATGCAT
GCGGCGCGGTCCCGTTCCCGGCCGGGCGGGGCAAAGCGCAACCAACGCCCCCAACCCCCAGCGACGGGGAAAGGTCCCGA
CG--TCCTGTACTCCTCGTCCGCCC--------------------------GCTTGCTTCAGTACCCTCAGATCAGATGC
CCTCTTTAACTCCATCCGTGCTTGCTTGGGGCCGCCTCGCCCGCCCTCGACGTCGACGGGGAGCGCCCGGGGCAACGACA
TTCCGCTGCCGCGTGTTACTGCACACCGCAGGCCCTCCGGATATATAGGTGCACGCGTCCGCTGGCTGCTCCTCCATTCC
GCCTCCGTGTCGATAGCTA----------C--ACGTGCGTGCTCGATCTCCATCGACGACCATCGCAATACGTCCGTCAC
AAACTCCTTAGACTCTGGTCCTTCGTACGAGAACGTAGCGGCAACATGCTCGACGTGGCCACAAGAGCAGCCGGCGGGCT
GGCGCGCTCGCTGGTCGTCGCCGCCTTCGGCGCAGGTACGTACGCGCGGCCGCACATGCATGTTATGCAT----------
----------------------------------------------------------------TCTTTTTTTCCCGCCA
TAATTAAACGATCTTATGCCGATTGATTAACCGAGGTGCAC-TGTGTGCAGCCGGTACGGTGATCGGCGGCATGCTCGGC
CTCCTGTGGGCCTTCGTCAACGAGGACGCCCTGCTGCAGGGCGCGGTCGTCGGGGCGGTCACCGGCGCCCTCGTCTCCGT
GGAGCTCGCCGACTCCCTCCTCAGGATATGGACCTGCGGCGACTGCTCCATGGACGAGCGCATCAAACGCACGGTACGCT
TCGCAGGTCGCCATGTTGGAGATTGGATCGCCATTGACCAAGATCAACAATTAATTT-ATGGAG-TTCATTTTGCAGAGG
CTGGTGCTCAGGAGCGTGGCGGCCGGCCGCCTTCTGCGCGGCTCGGTATTCCCGACCATCAGCGGTGCGCTGGACAGCCA
GATCGAGGCGCTGCAGCAGCACCACTCCTCCCGAGGCGGCCTGTTCGAGCCGAGCTCTGGTCCGGTGACGGCCGCGCGGA
GGGCCGCCGTCGAGAGCCTCCCGGCAACGGTGCTCACCAAGGAGACCGCGGGCGCAGGCCACCACACCACCTGCCCCATC
TGCCTCCATGTCAGTGCTATAGCTAGCTTCTCGTCCGAGCTAGTGAT---GTATAGCGCCAATGT----GCCATTGATTA
GCTGACGAGCTGATGTTCTTGTCCTGCTCAGGAGTTCCAGCCCGGCGAGAGCGCAAGGAGGCTGCCGGCGTGCGGCCACG
TG-------TTCCACCTGGCGTGCATCGACAGCTGGCTGCTGTGGAAGCCCCACTGCCCCATGTGCCGGCACGCCGTCTA
CTAGCCTATCCCCC----------GCCGCCGCCGGGGAACAAACAAACGGAGGAACGACGTACGGTCGCGTTGCTGCAGA
TGAAGTGTA----GTAGTAGTACATGGGTCTCACGAAGCAGAGGACTGTGGAGTCCTCTCTCGTGACGAAAGATAAATTT
TCCCACGAGAAATGTGTTTTTTTGTGTGTCGTTGTACAGAGC--AAGATGCAGATGCTGAGTTGAGCTATACGTACCGCT
CAATTTGTGGTGATGTCTCACTCCTGGAACAGGCAGGGCCGCAGCATTCCTGGAACCAACTGTCT---------------
--GTATGTCGCTGAGACGGCGAGAGGCGAACGAGATCACATTGATTCAGAACCTACCTAATTAGCCGGGTTACATCACAT
GATTACATTGCGACCAGGGCGCGCGAAAATGACCACTCCAACAGCTACAGACTCACGAAACAAACCGTG--GTTGGATGG
TTAGCAGGAGATGGTATCCCGGTT-CATCAAAGTTTAAGTCCTAGATTTTGGTGCTCACAATTTTCTGTAATTATTTTAG
GCCTTCTT-CGATGTGTGTTCAGTGGAAGAAGAGGTTTTTATCGACTATGAAGGTGTATGTGACGAGTTCGTTAATCTTA
AGATGATGTGCCAGCTCAGTCTCTCAAAAGTGCTCATAGAGGTAGGGTGTGCATGTGTGTGTTTATAGGGATGAGTATAT
GAGTGTCTGCGTCCGTACTATGTTAAAAAAGAAAAAGAAAAATATGGACTCCTTTGATTCAAACGAGGTTCATAGGATTT
TTGGAGAACGAGAGTGCTTAAGATTTTTTTTCTATGTTGATTATTTGATTCATAGAATTAAATCCTATAGGAATTTGAAG
GATTTCTTTGTACTGTTTCTGGTAGGATTTCTAGCATTCTACCTCCAGCCCACTTGAAAAAACAACACAAAAAAAGCCAC
ACTCTCTAGTGCAGACTAATGCATAGGCCCAGACA---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TACAAACAAAAACAAGTAGGCTGAGGAAAAACAGCCCACAA
GCAA--CGCACAATCAGCGCGGGCGATCAAACAGTTTGCACAAATGTTTCAGGGTCTTGATCGTGTAGTAAACTACTTAG
ATGTGACATACTTATTTTCTCATCTAGATGAGAACAAATCCATATTCCAAATACATATAAGCTAC---------------
---------------------------------------------------------
>chr5D_424
GCCTGC--------------------------------------------------------------------------
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-----------------------------------CTCCTCCAAGCTCCATCCATCCGTACATAGGAACGGCTCGCCTCG
CCGGTCCCCGACGTAGACGCGGAGCGGCCGGGGCGGCGACAAGTTGCTGTCGTCTGGCCGGCGATCGCTCGAACTCCAAT
TTGGACGTACACAGTTGGGTGCAAGGTACTACATGAGAG--------CACAGGTCGTGCGCATCAACCGCTTCTTTGATT
CTCTGTGCATCGTCAC--TCTAATCGACGTATACCAATCGGCAAAGCAAATCCCATCCGTGCAT--------GCATGCAT
GCGGCGCGGTCCCGGTCCCGGCCGGGCGGGGAAAAGCGCAACCAACGCCCCCAACCCCCAGCGACGGGGAGAGG-----T
CCTCTCCTGTACCCCTCGTCCGCCCGGTGCCCTCCCTGTGCCGTCGCGCTTGCTTGCTTCGGTACCCTCAGATCAGATGC
CCTCTT-AACTCCATTCGTGCTTGCTTGGGGCCGCCTCGCCCGCCCTCGACGTCGACGGGGAGCGCCCGGAGCAACGACA
TCCCGCTGTCGCGTGTTACTGCACGCCGCAGGCCCTCCGCATATATATGTGCACGCGTCCTCTATCTTCTCCTCCATTCC
GCCTCCGTGTCGATAGCTA----------CGTACGTGCGTGCTCGATCTCCATCGACGACCATCGCAATACGTCCGTCAC
AAACTCCTTAGGCTCCGGTCCTTCGTACGTGAACGTAGCAGCAACATGCTCGACGTGGCCACCAGAGCAGCCGGCGGGCT
GGCGCGCTCGCTCGTTGTGGCCGCCTTCGGCGCAGGTACGT----GCGGCCGCACATCATGTTACATTCTTCTC------
--------------------------------------------------------------TGTCTTATTTTTGCGCCA
TAATTAGACGATCTTATGGCGATTGATTAACCGAGGTGCATTTGTGTGCAGCCGGTACGGTGATCGGCGGCATGCTCGGC
CTCCTGTGGGGCTTCGTTAACGAGGACGGACTGCTGCAGGGCGTGGTGGTCGGGGCGGTCACCGGCGCCCTCGTTTCCGT
GGAGCTCGCCGACTCCCTCCTCAGGATATGGACCTGCGGCGACTGCTCCATGGACGAGCGCATCAAACGCACGGTACGCT
TCGCTGGTCGCCATGTTGGAGATTGGATCGCCATTGATCAACATTAACAATTAATTT-ATGGAGTTTCATTTTGCAGCGG
CTGGTGCTCCGGAGCGTGGCGGCCGGCCGCCTCCTGCGCGGCTCGGTGTTCCCGGCCATAAGCGGCGCGCTGGACAGCCA
GATCGAGGCGCTGCAGCAGCACCACTCGTCGCGAGGCGACCTCTTCGAGCCGAGCTCCGGCCCGGTGACGGCCGCGCGGA
GGGCCGCCGTCGAGAGCCTCCCGGCGACGGTGCTCACCAAGGAGACCGCGGGCGCGGGGCAGCACACCACCTGCCCCATC
TGCCTCCATGTCAGTGCTACAGCTAGCTTCTCGTCCGAGCTAGTGAT--AGTATAGCGCCAATGTGCGTGCCATTGATTA
GCTGACGGGATAATGTTCTTGTCCTGCTCAGGAGTTCCAGGCCGGCGAGAGCTCCAGGAGGCTGCCGGCGTGCGGCCACG
TG-------TTCCACCTGGCGTGCATCGACAGCTGGCTCCTGTGGAAGCCCCACTGCCCCATGTGCCGCCACGCCGTCTA
CTAGCCTATCCCCCC---------GCCGCCGCCGGGGAGCAAACAAACGGAGGAACGACGTACGGCGGCGTTGCCGCAGA
TGAAGCGTA----GTAGTAGTACATGGGTCTCACGAAGCAGAGGACTATGGAGTCCTCTCTCGTGACGAAAGATAAATTT
TCCCACGAGAAATGTGTTTTTTTGTGT--CGTTGTACAGAAAGAAAGATGCAGATGCTGAGCTGAGCTATACGTACCGCT
CAATTTGTGGTGATGTCTCACTCCTGGTACAGGCAGGGCCGCAGCATTTCTGCAACC-----------------------
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>SNPs
----S----SS-S---S------S-------------------------SS------------S-----S----------
-----S----------S---S----S-SSSSSSSSSS-----------------------S---------------S-SS
S----------------------S--S--S-SS--------------S---------------S-------------SS-
-SS---S-------S---SSSSSSS---------S-----------S--S-----------------SSS-S-----S--
S--S-------------S-------------SS---S--SS--S--S----------------S---SS-----------
-----S----------SSSSSSSS--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
------S----------------------------------------------------S--------------------
-------------S----------------------------------------------------------S-------
---------------------------------------------------------S----------------------
-------------------------------------------------S------------------------------
----------------S----S-----S-S--------------------S-----------------------------
--------------------------------------------------------------------------------
---------------S------------------------------S---SSS-S-SSS---S-S--SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SS--------------
-------------------S---S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------------------------S--------------------------S----------------------
----------------------S----------------------S----------------------------------
-----------------------------S--------------------------------------------------
-------------------------S--------------------S---------------------------------
--------------------------------S---------------S-------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
------------------------------S-S---------S-------------------------------------
---------SSSS-------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------------------------------------S-----S-SS-S-SSSSSSSSSSSSSSSS
SS------------------------------------------------------------------------------
---S---------------------------------------------------------S------------------
----------------------S-S-------------------------------------------S-----------
-------------------------S------------------------------------------------S-----
-----------S---S----------------------S--S------S-------------------S-----------
S-------SS----S----------S---------------------S-S------------------------------
----------------S---------------------------------------------------------------
-----------------------------------------------------------S--------------------
---------------------------S-S--------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
---------------------------------------------------S-------S------------------S-
--------------------------------------------------S-------S----------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_101
--------------------------------------------------------------------------------
-GCCTCCTTAAATGGTCGGGT-----------------------------------------------------------
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>reverse_1057
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----------------GTACGTACGTAGGTGCGTGC--------------------------------------------
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>forward_814
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--------------------------------------------------------------------------AGAGGT
CCTCTCCTGTACCG------------------------------------------------------------------
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>reverse_2466
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-----------------------------------------------------------------AGAGGCGAACCAACT
CAGTG---------------------------------------------------------------------------
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