>input_sequence_54699
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-----------------------------------------------------------------------AGCTCGATC
CCGACCTCACCGGCACCGCACAGTACCGCTGCGGACGGACTGTAGAGCAGAGCCATGGTGAACGCCTTCTTCGCGACCCT
GGCGCGGGGGCTGGACGACCTGAGCGGCGCGGGCGGGCTGTCCTCGCTGCCGGCGCTGCTGCGTGCGGCGGCGCTGCTCA
GGGGCCTGCACTCGCAGCTCATGGTGCTCGTCGGCCAGCTCCACCTGCCGCCCGGCGGCCGGTGGCTGGACGAGTACATG
GACGAGACGGCCCGCCTCTGGGACGCCTGCCTCGCCGTCAAGCTCGGCCTCGCCGCCGTCGAGCGCTACTGCGCCGCCGC
GTCCTGCGCCGCCGCCGCCCTCGACGACTGGCTCCAGGACCCCTCCCCCCTCTCCACTCGCCAGGTTGGTCCCAGCCGCT
TCTTCGCTTTATTCCAACA---------------------GGCAGCAATCATGATCTCTCTTTCGAAGAAAAGAATAGTG
ATCATG----------TCGCCGCCTT---TTTTTCTTCTCTCTCGAGCTTCTTTCTGCACTGTGCGATTCAGTCCTCTGT
CTT---------------------------CTTATTTTTGATCTGTTTCTTGAACTCTTCCGTTCTGAT---------CG
TGCATTGGCGGCACCAGGTGATGCGGGCGATCTCGGCGTCGAGGAGGGAGGCCATGGCGGCGGAGGAGGAGAACCGGGCG
CTGTCCGAGTCGAGGATCGCGCCGCTGTCCCTGCAGCTGGACGAGCGGCGCGCGGCGGACGCCAGGCTCAGCGGCTTCAA
CGGCTTCCGCGGGCTGCTCTACGCGCTGCACAACGCCAGCTCCCTCCTCCTGCTCATCCTGGCCGGCGGCGCCGTCGCGG
GGTCCCCGCGCTCGTCCTCCGACGGCGCGGACGACAACAGCAGCAGCAACGACGACGGGTTCATGTCCTCCATCGCGACG
CTGCAGAAGCGGATGGCGGAGGAGGCCGCGGGCGACG------------GCGCGCCGGGGATGATCAGGATGCAGGAGCT
GCGGCGCGCGCGCGCGGCGGCGGAGGCGGCGCGGGAGGAGGTGGAGCGCGCGGCGGCGTCCGGCGGCGGCAAGTGCGGCG
ACCGCGACGGGGCCGTGAAGGGCAAGGCCGGGGAGCTGAAGGCGTGGCTGGAGGTGCTCCGCGCCGGCACGGACGGGCTG
GCGTGCCAGCTGGACGACTTCCTGGACGACATTGTGGAGGGCCGCAAGGAGCTCTCCGACCTCTGCAGCCACTGACCGTA
CCGA------TCGACCGTCCGACCCGATCGATGAAACGACGATGGTGGTTCCTGTCGCCTGCTTGCCTGGCGGCAACGC-
--G---TGGTGGTGGTGTACAAGTAAAGCAATGCTGCTCCG---------------------------------------
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>chr3D_1_TraesCS3D01G378800
GATGCTTTGAGTAATCTATAAGGGCTTCGAATGCCCAACCA-TTTGTGTGCATATTTTGTTCAAAAATACAAAATTTTGT
GACTTCGATTACAAATGTGAGATTTGATAGTTTGCATATTTTGAGCCAGAAATCACGTGTAATTATTTTATATAATTTTG
GTTCCTAGAAATGAAGCATAAAATTGCAAATAATTTTGAGCAATTTTAGGCTTAG--AACTGTGTGATTTCTTAGCGGTA
CATCTTGAAGCCCAAAATTGCACATAAAAAGGCACATCTTCGTATTTATGTAGCAAAAAAATCATTTTTTTTGCGAGTCA
ATTTACAAGTTTGGATTTGGCCTTTTACATTTGTCCAAGTAGTCCTATATTAGATTTGTTCATGGAG--CACGTCAAGAC
TTAATTGCGAGAAAAAGTAAATCGACTGATGTACTAAACCTCCCGAGCAAACGCTCCCGCATTTGGCCGCTGGCCACGAT
CTAGAATTGAGGCGACATTTCTTGAG-TTTTTCCCGAAGAGAAGCCCCAAAAAATAGCA-GTACCCTCGCTGCTTAATCT
AGGCGGACAAGGAAACAGTGGTGTAAAAAGCCATTTCCCAACCATACCACACCATGTTCAACTCCTTCCGGAAACCCAGC
AAAGCAGAGG---CCACCAGCAC--GCCCACCCGCACACACAAGGCCTGCCCGCTCCCGCACGGACAACGGGACAGGGCA
TACAAGCCGAGC------GCGCGCGAGAG---AGCA-GAGGACACACGACCCAGCAAAGC-----GGGCAGGGCA-GCCA
TGGCGCTGCCTCA---CCCCAACCTCATCATCGCCCTTCTCCCCCTCCTGTAGACACCCATCATTGCACTCCACTCCCCC
ACCCCGATCGTGTCGTCGTGTCCCCAGCTCTCGCCCTCCTCTCCCACTCCGACCCCCTTCTCCTGTCCTCCCTCGTCTTC
TTGCTCCTGCACCGCCCGCCCACGCCCCAGCCCACGCTATATATATTGCTGCCCGCGCGCCGTCGGCTTCCAGCTCGATC
CCGACCTCACCGGCACCGCACAGTACCGCTGCGGACGGACTGTAGAGCAGAGCCATGGTGAACGCCTTCTTCGCGACCCT
GGCGCGGGGGCTGGACGACCTGAGCGGCGCGGGCGGGCTGTCCTCGCTGCCGGCGCTGCTGCGTGCGGCGGCGCTGCTCA
GGGGCCTGCACTCGCAGCTCATGGTGCTCGTCGGCCAGCTCCACCTGCCGCCCGGCGGCCGGTGGCTGGACGAGTACATG
GACGAGACGGCCCGCCTCTGGGACGCCTGCCTCGCCGTCAAGCTCGGCCTCGCCGCCGTCGAGCGCTACTGCGCCGCCGC
GTCCTGCGCCGCCGCCGCCCTCGACGACTGGCTCCAGGACCCCTCCCCCCTCTCCACTCGCCAGGTTGGTCCCAGCCGCT
TCTTCGCTTTATTCCAACA---------------------GGCAGCAATCATGATCTCTCTTTCGAAGAAAAGAATAGTG
ATCATG----------TCGCCGCCTT---TTTTTCTTCTCTCTCGAGCTTCTTTCTGCACTGTGCGATTCAGTCCTCTGT
CTT---------------------------CTTATTTTTGATCTGTTTCTTGAACTCTTCCGTTCTGAT---------CG
TGCATTGGCGGCACCAGGTGATGCGGGCGATCTCGGCGTCGAGGAGGGAGGCCATGGCGGCGGAGGAGGAGAACCGGGCG
CTGTCCGAGTCGAGGATCGCGCCGCTGTCCCTGCAGCTGGACGAGCGGCGCGCGGCGGACGCCAGGCTCAGCGGCTTCAA
CGGCTTCCGCGGGCTGCTCTACGCGCTGCACAACGCCAGCTCCCTCCTCCTGCTCATCCTGGCCGGCGGCGCCGTCGCGG
GGTCCCCGCGCTCGTCCTCCGACGGCGCGGACGACAACAGCAGCAGCAACGACGACGGGTTCATGTCCTCCATCGCGACG
CTGCAGAAGCGGATGGCGGAGGAGGCCGCGGGCGACG------------GCGCGCCGGGGATGATCAGGATGCAGGAGCT
GCGGCGCGCGCGCGCGGCGGCGGAGGCGGCGCGGGAGGAGGTGGAGCGCGCGGCGGCGTCCGGCGGCGGCAAGTGCGGCG
ACCGCGACGGGGCCGTGAAGGGCAAGGCCGGGGAGCTGAAGGCGTGGCTGGAGGTGCTCCGCGCCGGCACGGACGGGCTG
GCGTGCCAGCTGGACGACTTCCTGGACGACATTGTGGAGGGCCGCAAGGAGCTCTCCGACCTCTGCAGCCACTGACCGTA
CCGA------TCGACCGTCCGACCCGATCGATGAAACGACGATGGTGGTTCCTGTCGCCTGCTTGCCTGGCGGCAACGC-
--G---TGGTGGTGGTGTACAAGTAAAGCAATGCTGCTCCGACCCATAAGTGGCGGCAGTACGTA---GTCGTAGGCGTC
TTTTGCAGTGGCAGTGCCGGTCTGGGATCGGAGAGTGGAGTGGAGTGGAGTGTCGCAGCGTTTTGGTCAGGTCATCATGT
TGTTGCTCTGCTA----CTTCCTTTCTTGCTGGCTCACTCGCTGCTGCTGTACCCTGTACGTACGTGCGTGCTATGCTGT
GTGTGTCTGAGTGTCTCT------CTCTGCCATGCAAGTAGAGTATACGTACCACTACCAGAGACATGATGGGGTTGAGA
CTTGAGAGAAGAGATGGTCGCAAGAAAAGGCTTGTTTGTACTGTTTGT--------------GTGTGCAGGGGAGGGAGG
CAGCTCGGGTTGAGCGAGAGGGAAAGAGATCGATCTTTGTTTCGTTGTTGCAGGGGCGGCACAGGCAGTTGCGCCACGAA
AGGCTGCTTTTTGTTTGCTCGCCTGCTAGCTACTCCCTCCGAACGTTCGGTCGCAGAAATGGATATATCTAGACGTATTT
TAGTTCTAGATACATCCATTTCCGAAACAAGTAATTTCAAACGGAGAGAGCACCGGTGGCGTCTGTGTCTGTCACAAGGG
CAAGGGCAAGGGCAAGAGAATATAGGTGAACTTTTGTTCTCACTCTTTGCACTTTTGAACCCAACAACTTCTCCTCGCCT
GCGGCTTCGGCTTCAAGCGTGTTCCCGCCTTGAGCCTCACAGCTTCGGCTCCAAGGAAGCATG-GGGCATCTGCACGAAA
GCTACGTCTACCAAACAAATGGAGACTAATCCGGCTA--TAGGATGTTA---ATGTCTCATGTTCATACCACAAGTAGTA
GCAAAACTTAACCACAACGAGAA---GCTACTGCTGGTTGGAGACTAATGTGGCT-GGCCTCATGATGTTAATGTCTCAT
GTTCATACTGCAAGCACTAGCAAGCTTAACCACAACTGGCTTCAGTTCAGCCTAGTGAGGGCCCTAATCGATGGACGTAT
GCTGATCAGTGAGGTGATGGTGCTGCCTTGCCAACCTC
>chr3B_3
--TGCTTTGCGTAATCTAAGAGTTAG--GAATGCCCAACCCGTTTGTTTGCATATTCCATTCGAAAACACACATTTTTGT
TTGTTCGTGACTTAGTTATA------ATACTTTACATATTTTGAGCCAAAAATCACGCGTAACTATTTTATATGATTTTG
GTTTCGAGTAATGAAGCCTAAAATTGCAAATAGTTTTGTGCAACTTAAGGTTTGAAAACCTGTGTGATTTCTTAGCAGTA
CATTTTGAAGCCCAAAACTGCACACAAAAAGGCACATCTTCGTACTTATGTAGCTAAAA------------------TCA
ATTTACAAGTTTGTATTTGGCCTCTTACATTTGTCCAAG--------TATTATATTTGTTTATGGAG--CACATCAAGAT
TTAATTGTGAGGAAATGCAAATCGGCTGATGTATTCAACT--------------TCCCACATTTGGCTGCTGGCCACAAT
CTAGCATTGGCGCGATATTTCTTCAG-TTTTCCCCAAAGAGAAGCCCCAAAACATAG-A-GTACCCTCGCTGCTAAATCT
AGGCGGACAGGGAAACAGTGGTGTAAAAAGCCATTTCCCAACCATACCACACCATGTTCAACTCCTTCCGGAAACCCAGC
AAAGCAGAGGCCACCACCAGCAC--GCCCACTCGCACACACAAGGCCTGCTGGCTCCCGCACGGACAACGGGACAGAGCA
TACAAGCCGAGC------GCGCGCGAGAG---AGAGGGAGGACACACGACCCAGCAAAGCGGGCAGGGCAGGGCA-GCCA
TGGCGCTGCCTCA---CCCCAACCTCATCATCGCCCTTCTCCCCCTCCTGTAGACACCCATCATTGCACTCCACTCCCCC
ACCCCGATCGTGTCGTCGTGTCCCTCTCGC-------CCTCTCCCACTTCGACCCCCTTCTCCTGTCCTCCCTCGTCTTC
TTGCTCCTGCACCGCGCGCCCACGCCCCAGCCCACGCTATATATATTGCCACCCGCGCGCCGTCGGCTTCCAGCTCGGTC
CCGACCTCACCGCCACCGCACAGTACTTCTCCTGACTT---------CAGAGCCATGGTAAACGCCTTCTTCGCGACCCT
GGCGCGGGGGCTGGACGACCTCAGCGGCGCGGGCGGGCTGTCCTCGCTGCCGGCGCTGCTCCGGGCGGCGGCGCTGCTCA
GGGGCCTGCACTCGCAGCTCATGGTGCTCGTCGGCCAGCTCCACCTGCCGCCCGGCGGCCGGTGGCTGGACGAGTACATG
GACGAGACCGCGCGCCTCTGGGACGCCTGCCTCGCCGTCAAGCTCGGCCTCGCCGCCGTCGAGCGCTACTGCGCCGCCGC
GTCCTGCGCCGCCGCCGCCCTCGACGACTGGCTCCAGGACCCTTCCCCCCTCTCCACTCGCCAGGTTGGTCCCGCT---T
CCTTCGCTTTATTCCAACATCCTCTGCGCGCGAGCAGCGCGGCGGTAATCATGATCTCTCTTTCGAAGAAAAGAATAGTG
ATCATGAATGATCATGTCGCCGCCTTCCCTTTTTTTTCTCTCACAAATTTCTTTCTGCACTGTGCGATTCACTCCTCCTA
TGTCT-TGTGTGCCATCGTCAATT-----GCTTGTTCTTGCTCTGTTTCTTGAACTCCACGAATCTGATCGAACCGCGCG
TGCAATGGTGGCACCAGGTGATGAGGGCGATCTCGGCGTCGAGGAGGGAGGCCATGGCGGCGGAGGAGGAGAACCGGGCG
CTGTCCGAGTCGAGGATCGCGCCGCTGTCCCTGCAGCTGGACGAGCGGCGCGCGGCCGACGCCAGGCTCAGCGGCTTCAA
CGGCTTCCGCGGGCTGCTCTACGCGCTGCACAACGCCAGCTCCCTCCTCCTGCTCATCCTGGCCGGCGGCGCCGTCGCCG
GGTCCCCGCGCTCGTCCTCCGACGGCGCGGAC------AGCAGCCGCAGCGACGACGGGTTCATGTCCTCCATCGCGACG
CTGCAGAAGCGGATGGCGGAGGAGGCCGCGGGCGACGACGGCG---ACGGCGCGCCGGGGATGATCAGGATGCAGGAGCT
GCGGCGCGCGCGCGCGGCGGCGGAGGCGGCGCGGGAGGAGGTGGAGCGCGCGGCAGCTGC---CGGGGGCAAGTGCGGCG
GC---------GCCGTGAAGGACAAGGCCGGGGAGCTGAAGGCGTGGCTGGAGGTGCTCCGCGCCGGCACGGACGGGCTG
GCGTGCCAGCTAGACGACTTCCTGGACGACATTGTGGAGGGCCGCAAGGAGCTCTCCGACCTCTGCAGCCACTGACGACC
GAGCCGATCGTCGACCGCCCAGCCCGATCGATGGTGAT--GATGGTGGTTCCTGTCGCCTGCCTGCCTGGTGGCAACGC-
--GTGGTGGTGGTGGTGTACAAGTAAAGCAATGCTGCTCCGACCCATAAGTGGCAGCAGTACGTAGGCGTCGTAGGCGTC
TTTTGCAA------TGCCGGTCTGGGATCGGAGAGTGGAGTGGAGTG-----TCGCAGCGTTTTGTTCAGGTCATCATGT
TGTTGCTCTGCGACTTCCTTTCTCGCTGCCTGGCT-----------GGTGTACCCTGTACGTACGTGCGTGCTATGCTGT
GTGTGTCTGAGTGTCTCT------CTCACCCATGCAAGTAGAGTGTACGTACTACTAGCAGAGACATGATGGGGTCGAGA
CCCGAGAG-AGAGATGTTCGCAAGAAAAGGCTAGTTTGTAGTACTGTTTGTGTGTGCAGGGGGT-----------GGAGG
CAGCCCGGCTTGAGTGAGAGGGAAAGAGATCGATCTTTGTTTCGTTGTTGCAGGGGCAGCACAGGCAGTTGCTTCACGAA
AGGCTGCTTTTTGTTTGCTCGCCTGCATCTGCATGGGGGCCGTGGTGTGTGTTGGACTACTGCAGTGCTAGCTAGCTAGG
TG----------------------------------------------------------GTGTCTGTCTGTCAC-----
-AAGGGCAAGGGCAAGAGAATATAGGTTAACTTTTCTTCTC-CTCTTGACACTTTTGAACCCAACAACTTCCCCCCGCCC
GCGGCTTCGGCTTGAAGCGTGTTCCCGCCTTGAGCCTCACAGCTTCGGCTCCAAGGGAGCATGAGGGCATCTGCACGAAA
GCTACGTCTACCAAACAAATGGAGACTAATCCGGCCGGCTAGGATGTTA---ATGTCTCATGTCCACACTACAAGTAGC-
---AAACTTAACCACAACAAAAA---GCTACTGCTGGTTGGAGTGGAGACTAATCCGGCCTCATGATGTTAACGTATCAT
GTTCATACTGCAAGCACTAGCAAGCTTAACCACAACTGGCTTCAGTTCAGCCTGGTGAGGACCCTAATCGATGGTCGTGT
GCTGATCAGTGAGGTGATGGTGCTGCCACGCCAACCTC
>chr3A_3
--TGCGTTGCGTAATCTAAGGGTTAG--GAATGGCCAG-CCGTTTGTTTGCATATTTCGTTCCAAAATACATATTTTTGT
TTGTTCGTGACTTAGTTATA------ACACTTTACATATTTTGCGCCAGAAATCACGCGTAATTATTTTATATGATTTTG
GTTTCGAGAAATGAGGCCTAAAATTGCAAATA-TTTTGTGCAATTTTAGGTTGAAAAAACTGTGTGATTTCTCAGCGGTA
CATTTCGAAGCCCAAAACTGCACATAAAAAGGCATATCTTCGTGCTTATCTAGCAAAAA------------------TCA
ATATACAAGTTTGTATTCGGCCCTTTACATTTGCCTAAC--------TATTAGATTTGTTTATGGAGATCACATCGAGAT
TTAATTGTGAGAAAAAGTAAATCGACTAATATACTCAACT--------------TCCCACATTTGGCCGCTGGCCACAAT
CTAGCATTGGCGCGACATTTCTTCAGTTTTTCCCCAAAGAGAAGCCCCAAAAAGATAGACGTACCCTCGCTGCTTAATCT
AGGCGGACAGGGAAACAGTGGTGTAAAAAGCCATTTCCCAGCCACACCACACCATGCTCAGCCCCTTCCGGAAACCCAGC
AAAGCGGAGGAGGCCACCAGCACACGCCCGCCCGCGCACACAAGGCCTGCCCGCCCCCGCACGGACAACGGGACAGGGCA
TACAAGCCGAGCCATCGCGCGCGCGAGAGCAGAGCA-GAGGACACACGACCCAGCAAAGCGGGCAGGGCTGCCATGGCCG
TGCCGCTGCCTCACCTCCCCAACCTCATCATCGCCCTTCTCCCCCTCCTGTAGACACCCATCATTGCACTCCACTCCCCC
ACCGCGATCGTGTCGTCGTGTCCCCAGCTCCCGC------------------CCCCCTCTCCCACTCCCCCCTCGTCTTC
TTGCTCCTGCACCGCCCCC----------GCCCACGCTATATATATCGCCGCCGGCTTCC--------TCCAGCTCGGCC
CCGACCTCACCGCCACCGCACAGTACCGCT----------------GCAGAGCCATGGTGAACGCCTTCTTCGCGACCCT
GGCGCGGGGGCTGGACGACCTGAGCGGCGCGGGCGGGCTGTCGTCGCTGCCGGCGCTGTTGCGTGCGGCCGCGCTGCTCA
GGGGCCTGCACTCGCAGCTCATGGTGCTCGTCGGCCAGCTCCACCTGCCGCCCGGCGGCCGGTGGCTGGACGAGTACATG
GACGAGACGGCCCGCCTCTGGGACGCCTGCCTCGCCGTCAAGCTCGGCCTCGCCGCCGTCGAGCGCTACTGCGCCGCGGC
TTCCTGCGCGGCCGCCGCCCTCGACGACTGGCTCCAGGACCCCTCCCCCCTCTCCACCCGCCAGGTTGGTCCCGGCCGCT
CCTTCGCTTTATTCCAACATCCTCTGCGCGCGAGCAGCGCGGCGGCAATCATGATCTCTCTTTCGAAGAAAAGAATAGTG
ATCATGCATGATCATGTCGCCGCCTTTTCTTTCTTCTCTCCAACTTCTTTC--TCTGCACTGTGCGATTCAGTCCTCTGT
CTCGTGTGTCTGCCATCGCCAATTGTTTTGCTTATTTTTGCTCTGTTTCCTGAACTCTTCCGTTCTGAT---------CG
TGCATTGGCGGCACCAGGTGATGCGGGCGATCTCGGCGTCGAGGAGGGAGGCCATGGCGGCGGAGGAGGAGAACCGGGCG
CTGTCCGAGTCGAGGATCGCGCCGCTGTCGCTGCAGCTGGACGAGCGGCGCGCGGCCGACGCGAGGCTCAGCGGCTTCAA
CGGCTTCCGCGGGCTGCTCTACGCGCTGCACAACGCCAGCTCCCTCCTCCTGCTCATCCTGGCCGGCGGCGCCGTCGCGG
GGTCCCCGCGCTCGCCCTCCGACGGCGGCGCGGACAC---------CAACGACGACGGGTTCATGTCCTCCATCGCGACG
CTGCAGAAGCGGATGGCGGAGGAGGCCGCGGGCGACGACGGCGGCGACGGCGCGCCGGGGATGATCCGGATGCAGGAGCT
GCGGCGCGCGCGGGCGGCGGCGGAGGCGGCGCGGGAGGAGGTGGAGCGCGCGGCGGCGGC---GGGCGGCAAGTGCGCTG
TCCTTGACGGCGCGGTGAAGGACAAGGCCGGGGAGCTGAAGGCGTGGCTGGAGGTGCTCCGCGCCGGCACGGACGGGCTG
GCGTGCCAGCTGGACGACTTCCTGGACGACATCGTGGAGGGCCGCAAGGAGCTCTCCGACCTTTGCAGCCACTGACGGCC
GAGCCGATCAACTCCATGGATGAA------------AT--GATGGTGGTTCCTGCCGCCTGCTTGCCTGGCGGCAACGCG
TGGTGGTGGTGGTGGTGTACAAGTAAAGCAATGCTGCTCCGGCCCATAAGTGGCGGCAGTACGTA---GTCGTAGGCGTC
TTTTGCAGTGCCGGTCTGGTCTGGGGATCGGAGAGTGGAGTGGAGTG-----TGGCAGCGTTTTGGTCAGGTCATCATGT
CGTTGCTCTGCTACTTCCTTCCTTTCTTGCTGGCT-----------GCTGTACCCTGTACGTACGTACGTGCTACGCTGT
GCTGTGCTGTGTGTGTCCCTCAGACTCTGCCATGCAAGTAGAGCATGCGTACCACTACCAGAT-----------------
-----GAG-AGAGATGGCTGCAAGGAAAGGCTAGTTTGTACTGTTTGT--------------GT-----------GCAGG
CAGCGCGGCTTGAGCGAGCGAGAG--------------------------------------------------------
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---------------GAGAATATAGGTGAACTTTTCTTCCC-CTCTTTGCACTTTTGAACCCAACAACTTCCCCTCGCCC
GCGGCTTCGGCTTCAAGCGTGTTCCCGCCTTGCGCCTCACAGCTTCGGCTCCAAGGGAGCACGAGGGCATCTGCACGAAA
GCTACGTCTACCAAACAAACGGAGACTAATCCGGCCGGCCAGGATGTTAACAATGTCTCATGTTCATACCACAAGTAGTA
GCAAAACTTAACCGCCACGAGAAGCTGCTACTGCTGGTTGGAGTGGGGACTAATCCGGCCTCATGATGTTAATGTCTCAT
GTTCATACTGCAA----------------------CTGGCTTCAGTAGTTCAGCCTAA-GACCCTAATCAATGGCCGTGT
GCTGATCAGTGAGCTGATGGTGCCGCCACGCCAACCTC
>SNPs
SS-------S--------SS--SSSSSS------------S------S---------S----S--------S-S------
SSS----SSSSSS-S-SSS-SSSSSS---S---S-----------------------S---------------S------
---S-S-----------S--------------S-----S-----------S---S-------------------------
---S-------------S--------------------------S--------------SSSSSSSSSSSSSSSSSS---
-------------S-------------------------SSSSSSSS-------------S-----------S------S
-------S---------------------------S---SSSSSSSSSSSSSSS----S------------------S--
----S----SS------------S-------S---S---------------------S----------------------
---------S----------------------------------------------------------------------
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------------------------------S---SSS-----------S-------------------------------
-------------------------------------------------S---------------------------S--
------------S-----------------S-S---SSSSSSSSSS----------------------------------
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-------------------------------------------------------------------------S------
S------------------------------------------S------------------------------------
----------------------------------S-------S-S-SS--------------------------------
----------------------------------------S---------------------------------------
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--------------------------------------------------------S-----------------------
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------------------------------------SS------S-----------------------------------
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----------------------------------------------------------S-SSS-----------------
S--SS-----S----------S----------------------------------------------------------
----------------------------------------------------------------------------S-SS
SS-S-------------S--SS-----------SSSSSSS----------------------------------------
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----------S-S----------------------------------SSSSS----------------------------
-----------------------------------SSSSSSSSSSS----------------------------------
---------------------------------------------------------------------------S----
-SS-----S-----------------------S-------------------------------SSSSSSSSSSS-----
----S---S------------------------------------------------S--------------SS------
--------------------------SSSSSSS-SSSSS-SSSS--SS-SSSSSSSSS-SS-SSS-SSSSSSSS-SSSSS
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-S----------SSSSS
S----------------------------------S-----S-----------------------------S-------S
--------------------------------------------------------S-----------------------
-----------------------------------SS-------------------------------------------
-------------------------------------------SSS-SSS-SSSS-------------------------
-----------------------------------------------------S------S-------------S---S-
---------------------------SS---------
>forward_454
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----------------------------------TAAACCTCCCGAGCAAACGC--------------------------
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>reverse_2355
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----------------------------------AACGACGATGGTGGTTCCTG--------------------------
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>forward_2321
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--------------------------------------------------------------CTGCAGCCACTGACCGTA
C-------------------------------------------------------------------------------
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>reverse_3328
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-----------------------------------------------ATGTGGCTGGCCTCATGATG-------------
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