>input_sequence_54695
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------------------------------------------------------ATGCCTCGCGCTTCTTGGCTCCTGGC
GTGCTCCCCGTGTGCCGGGCTCGCGTCGCTAGCCGCGCTCACCACCGGCCTGCTGGTCCTCGGCTACGCGTCGAGCTCCT
TCCTCAGGGATGCGGCGTATGGGTACGACGACCCCTACAGCCCGGACGCCGCCGACGCGGCGTCGACGGCGCCGCCGGCG
ACCGTGCCGAGGCGCGGGGCCGGGTACCCGCCGGTGCTCGCGTACTACATCTCCGGCGGGCACGGCGACTCCGTCAGGAT
GACGCGGCTGCTCAAGGCCGTGTACCATCCGACGAACCGGTACCTGCTGCACCTGGACGCTGGCGCGGGCGCGTACGAGC
GGGCGCGGCTGGCCGGCTACGTCAGGTCGGAGCAGCCGTTCCTCGAGTACGGCAACGTGCACGTCGTCGGCAAGGGGAGC
CCGGTCGACGGCCGCGGCGCGTCCGCCGTCGCCGCCGTGCTCCGCGGCGCCTCCGTTCTCATGAGGATTGGCGCCGACTG
GGACTGGCTCGTCACGCTCGCCGCCTCGGACTACCCGCTCGTGTCTCAGGACGGTGAGCTGCAATCCGTCACGTCTCGCC
ATTTTCCTTGCTCCGATTGATGAT-TCTTCATGTCACTGACAAAACCAATGGTGGCGTGCGCTGCGCAGACCTTCTCTAC
GCCTTCTCCACCGTGCCGAGGGACCTCAACTTCATCGACCACAGGATGGACTCCGAGACCGCGCCGGTGGTCGTTCTGGA
CCAGAATCTCCTGCAGAACACCAACGCCGAGATCTCCTTCTCGTCGGGGCACCGTCCGAAGCCTGATGCGTTCGAGCTCT
TCAAAGGTTCTCCCTGGACGATACTGAGCCGGGCCTTCGTCAAGCACTGCGTGGTGGCGCCGGACAACCTCCCGAGGACG
CTGCTCATGTACTTCAGCAACGCCCTGAACCCCATGGAGTTCTACTTCCAGACGGTCATGGCCAACTCGGCGCACTTCAA
GAACAGCACCGTCAACCACACCTTCCGGATCGCCGTCCCGGATGCCGCGCCGCCTCACCGGTCGCGGTACGACGCCGTGG
TGAGCAGCGGCGCGGCCTTCGCCGGCCGTTTCGGTGACGACGGCGACGAGGCGCTGCTGCAGAGGATAGACGAGGAGCTG
CTCAGGCGACCGCTCGACGGCGTCACGCCGGGACAGTGGTGCGCCGGCAGCGACGAGCAGGCAGCGGGCGAGGAGTGCTC
CGTCGGGGGCGACATTGACGTTGTCAGGCAGGGCGAGGCGGGACAGAGGCTGGCGAGCTTGATGGCCGGCCTTGTCGGGG
CCGGACCGTGA---------------------------------------------------------------------
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----------------------
>chr3A_1_TraesCS3A01G294900
CAGGCTTCTCGGCGGACGCCTAGTTGCCACAGCTCGTGCCGAGGCCAGGTCCTCGTCGGCGGCTTAGTCTGCACATCGAG
GGGCCCACCCTGCACGGGCAGGGACGAGGGCAACAAGAGGGAGGGGGCGAGGAGGCCATCGAGCTCGGCGGGGGAAGGCC
GAGGGCGGGCGCAGGGTCGCTGGTGGGGAGCTGCCCCGCGAGTCGCCTAGGAGTGCATTCATCGCCATCTCAAAATTACC
ATTCAGGGGTTTGGGAGTCGACCTCAATGTTCATTATATCAGTATAAACCTAAGCCCACGCAGTATTTTCGGTTAGCTAT
TTGGAGCTCTAATTTTCAGGTTTTGATTTTGTTAACCGAATTTAGAA-AAAAATACTGAAAGGTGGAAATCGAATTTTCG
GTTTACACGGAATGTCTACCCCGAGC-CGTAAGCGCTGCCACTTCTCCAACGGCTACCGTGCCCAAAGTAGTTTCGGTGC
ACTCGCGGCCACAAAGCACACCCTGATCGTGCACGCGCGACGGCCGGCCGCTAGACGTCGACATGCCTATCCTCCATGCA
TCAGCTATCAATGA-TTGAGATGCTGGGACGATTGGCGACATGGCCGCCCCGGCCTGCCGGCTCGCGTCTCCTTGGAAGC
ACGTCCTCTCCTTTGTTATACATGTATACATACAGATACAGTTCATGT--TAATTTCCATACCATATGATCCTAA-----
AAAAAAGAATCCATACCATATGTCACAAGAATATAGAACATGAAACCAAGGGAACAG--ATAGAAAACAAGAAATCAAGA
G--GAGATATCTTCTCCGTCCATGTCCAATTTTATTAATTATCGGCACCTCGCGGTGGCGTCAGTGCTTATGTGCTGCCT
CTCCATGATCGATCCCAACCTAACACAAGCGTTGACACCCAGAAGCTGAAGAGGGCTACTACTAGTACCGGACCGCCGGT
GACCATTCCACCGGCACACGCACGGCCGCGAGAGGGTCTGATCGAATACACGCAATGCCTCGCGCTTCTTGGCTCCTGGC
GTGCTCCCCGTGTGCCGGGCTCGCGTCGCTAGCCGCGCTCACCACCGGCCTGCTGGTCCTCGGCTACGCGTCGAGCTCCT
TCCTCAGGGATGCGGCGTATGGGTACGACGACCCCTACAGCCCGGACGCCGCCGACGCGGCGTCGACGGCGCCGCCGGCG
ACCGTGCCGAGGCGCGGGGCCGGGTACCCGCCGGTGCTCGCGTACTACATCTCCGGCGGGCACGGCGACTCCGTCAGGAT
GACGCGGCTGCTCAAGGCCGTGTACCATCCGACGAACCGGTACCTGCTGCACCTGGACGCTGGCGCGGGCGCGTACGAGC
GGGCGCGGCTGGCCGGCTACGTCAGGTCGGAGCAGCCGTTCCTCGAGTACGGCAACGTGCACGTCGTCGGCAAGGGGAGC
CCGGTCGACGGCCGCGGCGCGTCCGCCGTCGCCGCCGTGCTCCGCGGCGCCTCCGTTCTCATGAGGATTGGCGCCGACTG
GGACTGGCTCGTCACGCTCGCCGCCTCGGACTACCCGCTCGTGTCTCAGGACGGTGAGCTGCAATCCGTCACGTCTCGCC
ATTTTCCTTGCTCCGATTGATGAT-TCTTCATGTCACTGACAAAACCAATGGTGGCGTGCGCTGCGCAGACCTTCTCTAC
GCCTTCTCCACCGTGCCGAGGGACCTCAACTTCATCGACCACAGGATGGACTCCGAGACCGCGCCGGTGGTCGTTCTGGA
CCAGAATCTCCTGCAGAACACCAACGCCGAGATCTCCTTCTCGTCGGGGCACCGTCCGAAGCCTGATGCGTTCGAGCTCT
TCAAAGGTTCTCCCTGGACGATACTGAGCCGGGCCTTCGTCAAGCACTGCGTGGTGGCGCCGGACAACCTCCCGAGGACG
CTGCTCATGTACTTCAGCAACGCCCTGAACCCCATGGAGTTCTACTTCCAGACGGTCATGGCCAACTCGGCGCACTTCAA
GAACAGCACCGTCAACCACACCTTCCGGATCGCCGTCCCGGATGCCGCGCCGCCTCACCGGTCGCGGTACGACGCCGTGG
TGAGCAGCGGCGCGGCCTTCGCCGGCCGTTTCGGTGACGACGGCGACGAGGCGCTGCTGCAGAGGATAGACGAGGAGCTG
CTCAGGCGACCGCTCGACGGCGTCACGCCGGGACAGTGGTGCGCCGGCAGCGACGAGCAGGCAGCGGGCGAGGAGTGCTC
CGTCGGGGGCGACATTGACGTTGTCAGGCAGGGCGAGGCGGGACAGAGGCTGGCGAGCTTGATGGCCGGCCTTGTCGGGG
CCGGACCGTGAGGGCGCATTGAGCATCGAGTACGAAAATTG----------GTACACGTGGCTCGCTGTACGCTAACACA
AATACAGTAGTACACAGTTGCTTTGCAGGCCGGCTGCCAAGTCGCAATGGTCCGACATGTGTATAGGACGCTAAATCCAA
AGAGCGCTGCTATACGTAGGATCAACCCGAAATCACTAATTAAGGGATACTCGTTGCAAAGGAATTCGGCTTGCCTGCTC
TCTCTCGATGCTTTCATTCGTGCTTCCACTTTATCCTACTGCTGTCCTTTTATCTTTTTTCTTTCTAATAATCTAATCAT
CTCCTCCCTAATTTTAAGGGATGGGGTCGGGCCTAATTTTGTTCGAATCAAATCATGCCACGTATGCGGGAGCACGGATG
GGGGAGCAGGCAAGTCTCATCCGTTGCAAAGAACACTCCACTTTCTTAGGTTGCGACAAGTGGCGCACAAATGGCGCACA
TGCAGCGCGCCACTTGTCGCAACCTAGGAGTTTTCCC--TTTTTTCATAGATCCGTTTATTCAAAACATTTTATCTTTTA
AACCGTGCGTTCAAATCTCGAACCGTTTTCATCATTGGATTCCTCGCGTCAAGATCTTCAAAACTAGATCCCATGTTGAT
AGGTTTTGACAAACTTTTATTT-CATG--------------A--------------AAAAACCGGGTGAAAAAATCGAAC
CGGGAGCACGGTTTTTTTCCTTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACACCCGTACCT--TTTGTGGA
AACAAAACCGTGACTCTCGTGGAAAGAAAAAAAA-CAGAAAACGCGTTTTTTTT--CGTTTTCGAGAGGTACGGCCGTGA
CTCTCGCGAAAGCAAAACCGTGCCTCTCGCG-GAAGCAAAAGCATGACTCTCGCGAAAG-AAAAAAAA-TAGAAAACACG
TA-TTTTTTCCCTTT-CTGAGAGGCTCGGCCGTGACACTCACGAAAGCACAACCGTGCCTCTTGTGGAAGCAAAACCGTG
ACTCTCGCGAAAGAAAAAAAAC
>chr3D_171
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----------GCAGGGTCACTGGAGGGGAGCTGCCCCGCGAGTCGCCTAGGAGTGCGCTGGTCGCCATCTCGAAATTAGC
ATTTGGGGGTTTGGGAGTCGACCTCAATGTTCATTATATCAGTATAAACCTAAACCCACGCCGTATTTCCCGTTAACTAT
TTGAAACTCTAATTTTCGGTTTTTAATTTTGTTAACCGAATTAA-AA-AATAATACTGAACGGTAGAAATCGAATTTTGG
GTTTATACGGAATGTATACCCTGAGCACGTAAGCGCTGCCACTTCTCGAACGACTACCGTGCCCAAAGTAGTTTCGGTGC
ACCCGCGGCCACAAAGCACACCCTGATCGTGCACGCGCGACGGCCGGCCGCTAGACGTTGACATGCCTATCCACCATGCA
TCAGCTATCAATGA-TTGAGATGCTGGGACGATTGGCGACATGCCCGCCCCGGCCTGCCGGCTCGCGCCTCCTTGGAAGC
ACGTCCTCTCCTTTGTTATACATGTATACATACAGATACAGTTCATGTTATAATTTCCATACCATATGATCCTCAAAACT
AAAAAAAAATCCATACCATATGTCACAACAATATAGAACATGAAACCAAGGGAACAA--ATAGAAAACAAGAAATCAAGA
GAGGAGATATCTTCTCCTTCCATGACCATTTTTATTATTTATCGGCACCTCGCGGTGGCGTCAGTGCTTATGTGCTGCCT
CTCCATGATCGATCCCAACCTAACACAAGCGTTGACACCCAGAAGCTGAAGAGGGCTACTACTAGTACCGGACCGCCGGT
GACCATTCCACCGGCACACGCACGGCCGCGAGAGGGTCTGATCGAGTACACGCAATGTCTCGCGCTTCTTGGCTCCTGGC
GTGCTCCCCGTGCGCCGGGCTCGCGTTGCTAGCCGCGCTCACCACCGGCCTGCTGGTCCTCGGCTACGCGTCGAGCTCCT
TCCTCAGGGATCCGGCGTATGGGTACGACGACCCCTACAGCCCGGACGCCGCCGACGCTGCGTCGACGGCACCGCCGGCG
ACCGTCCCGAGGCGCGGGGCCGGGTACCCGCCGGTGCTCGCGTACTACATCTCCGGCGGGCACGGCGACTCCGTCAGGAT
GACGCGGCTGCTCAAGGCCGTGTACCACCCGAGGAACCGGTACCTGCTGCACCTGGACGCCGGCGCGGGAGCCTACGAGC
GGGCGCGGCTAGCCGGCTACGTCAGGTCGGAACAGCCGTTCCTCGAGTACGGGAACGTGCACGTCGTCGGCAAGGGGAGC
CCCGTCGACGGCCGCGGCGCGTCCGTCGTCGCCGCCGTGCTCCGCGGCGCCTCCGTTCTCATGAGGCTTGGCGCCGACTG
GGACTGGCTCGTCACGCTCGCCGCCACGGACTACCCGCTCGTATCGCAGGACGGTGAGCTGCAATCCGTGACGTCTCGTC
ATTTTCCCTACTCCGATTGATGAT-TCTTCATGTCACTGACAAAACCAATGGTGGCGTGCGCCGCGCAGACCTTCTCTAC
GCCTTCTCCACCGTGCCGAGGGACCTCAACTTCATCGACCACAGGATGGACTCCGAGACCGCGCCGGTGGTCGTGCTGGA
CCAGAATCTCCTGCAGAACACCAACGCCGAGATCTCCTTCTCGTCGGGGCACCGTCCAAAGCCTGATGCGTTCGAGCTCT
TCAAAGGTTCTCCCTGGACGGTACTGAGCCGGGCCTTCGCGGAGCACTGCGTGGTGGCGCCCGACAACCTCCCGAGGACG
ATGCTCATGTACTTCAGCAACGCCCTGAACCCCATGGAGTTCTACTTCCAGACGGTCATGGCCAACTCGGCGCACTTCAA
GAACAGCACCGTCAACCACACCTTCCGGATCGCCGTCCCGGAGACCGCGCCGCCTCACCGGTCGCGGTACGACGCCGTGG
TGAGCAGCGGCGCGGCCTTCGCCGGCCGGTTCGGTGACGACGGCGACGAGGCGCTGCTGCAGAGGATAGACGAGGAGCTG
CTCAGGCGACCGCTTGACGGCGTCACGCCGGGACGGTGGTGCGCCGGCAGCGACGAGCAGGCAGCGGGCGAGGAGTGCTC
CGTCGGCGGCGACATTGACGTTGTCAGGCAGGGCGAGGCGGGACAGAGGCTGGCGAGCTTGATGGCCGGCCTTGTCGGGG
CCGGACCGTGAGGGCGCATTGAGCATCGAGTACGAAAACACAAATATTATAGTACACGTGGCTCGCTGTACGCTAACACA
AATACAGTAGTAAAAAGTTGCTTTGCAGGCCTGCTGCCAAGTCGCAATGGTCCGACATGTGTA-----------------
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----------------------
>chr3B_173
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------------AGGGTCACCGGAGGGGAGCTGCCCCGCGAGTCGCCTAGGAGAGTGCTGGTCGCCATCTCGAAATTAGC
ATTCATGGGTTTGGGAGTCGACCTCAATGTTCATTATATCAGTATAAACCTAAACCCACGCCGTATTTTCCGTTAACTAT
TCGGAGCTCTAATTTTTGGTTTTTAATTTTGTTAACCGAATTCA-AAAAATAATACTGAACGGTAGAAATTGAATTTTCG
GTTTATACAGAATGTCTATCGTGAGCACGTAAGCGCTGCCACTTCTCCAGCGACTACCGTGCCCAAAGTAGTTTCTGTGC
ACTCGCGGCCACAAAGCACACCCTGATCGTGCACACGCGACGGCCGGCCGCTAGACGTCGACATGCCTATCCTCCATGCA
TCAGCTATCAATGATTTGAGATGCTGGGACGATTGGCGACATGCCCGCCCCGGCCTGCCGGCTCGCGCCTCCTTGGAAGC
ACGTCGTCTCCTTTGTTATACATGTA-ACATACAGATACAGCTCATGT--TAATTTCCATACCATATGATCCTCAAAAAG
AAAAAAATCCACACCC--TATGTCACAAGAATATAGAACATGAAACCAAGGGAACAAATATAGAAAACAAGAAATCAAGA
G--GAGATATCTTCTCCGGCCATGTCTGTTTTTATTATTTATCGGCACCTCGCGGTGGCGTCAGTGCTTATGTGCTGCCT
CTCCATGATGGATCCCAACCTAACACAAGCGTTGACACCCAGAAGCTGAAGAGGGCTACTACTAGTACCGGACCGCCGGT
GGCCATTCCACCGGCACAGGCACGGCCGCGAGAGGGTCTGATCAAATACACGCAATGTCTCGCGCTTCTTGGCTCCTGAC
GTGCTCCCCCTGCGCCGGGCTCGCGTCGCTAGCCGCGCTCACCACCGGCCTGCTGATACTCGGATATGCGTCGAGCTCCT
TCCTCAGGGGTGCGGCGTATGGGTACGATGACCCCTACAGCCCGGACGCCGCCGACGCGGCGTCGACGGCACCGCCGGCG
ACCGTGCCAAGGCGCGGGGACGGGTACCCGCCGGTGCTCGCGTACTACATCTCCGGCGGGCACGGCGACTCCGTTAGGAT
GACGCGGCTGCTCAAGGCCGTGTACCACCCGAGGAACCGGTACCTGCTGCACCTGGACGCCGGCGCGGGCGCGTACGAGC
GGGCGAGGCTGGCCGGCTACGTCAGGTCGGAGCAGCCGTTCCTCGAGTATGGCAACGTGCACGTCGTCGGCAAGGGGAGC
CCCGTCGACGGCCGCGGCGCGTCCGCCGTCGCCGCCGTGCTCCGCGGCGCCTCCATTCTCATGAGGCTTGGCGCCGACTG
GGACTGGCTCGTCACACTCGCCGCCTCGGACTACCCGCTCGTATCGCAGGACGGTGAGCTGCAATCCGTC-CGTCTCGTC
ATTTTCCCTGCTCCGATTGATGACCTCTTGATGTCACTGACAAAACCAATGGTGGCGTGCGCTGCGCAGACCTTCTCTAC
GCCTTCTCCACCGTGCCGAGGGACCTCAACTTCATCGACCACAGGATGGACTCCGAGACCGCGCCGATGGTCGTTCTGGA
CCAGAATCTCCTGCAGAACACCAACGCCGAGATCTCCTTCTCGTCGGGGCACCGTCCAAAGCCTGATGCGTTCGAGCTTT
TCAAAGGTTCTCCCTGGACGATACTGAGCCGGGCCTTCGTAGAGCACTGCGTGGTGGCGCCCGACAACCTCCCGAGGACG
CTGCTCATGTACTTCAGCAACGCCCTGAACCCCATGGAGTTCTACTTCCAGACGGTCATGGCCAACTCGGCGCGCTTCAA
GAACAGCACCGTCAATCACACCTTCCGGACCGCCGTCCCGGACGCCGCGCCGCCTCACCGGTCGCGGTACGACGCCGTGG
TGAGCAGCGGCGCGGCCTTCGCGGGCCGGTTCGCTGACGACGGCGACGAGGCGCTGCTGCAGAGGATAGATGAGGAGCTG
CTCAGGCGACCGCTCGACGGCGTCACGCCGGGACAGTGGTGCGCCGGCAGCGACGAGGAGGCCGCGGGCGAGGAGTGCTC
CGTCGGGGGCGACATTGACGTTGTCAGGCAGGGCGAGGCGGGACAGAGGCTGGCGAGCTTGATGGCCGGCCTTGTCGGGG
CCGGACCGTGAGGGCGCATTGAGCATCGAGTACGAAAATTG----------GTACACGTGGCTCGCTGTACGCG------
------GTAGTACACAGTTGCTTTGCAGGCCGGCTTCCAAGTCGCAATGGTCCGACATGTATATGGGACGCTAGATCCAA
A-------------------------------------------------------------------------------
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----------------------
>chr3A_2717
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---------------------CGTTGCAAAGAACACTCCACTTTCTTAGGTCGCGAC-----------AAGTGGCGCACA
TGCAGCGCGTCACTTGTCGCAACCTGTGAGTTTT-CC--TTTTTTCGTAGATCCGTTTATTCAAAATGTTTTATCTCTTA
AACCGCGCGTCCAAATCTCGAACCATTTTCACCATTGGATTCCTCGCGTTGAGATCTTCAAAACTAAATCCCATGTTGAT
AGGTTTTAACGAACTTTTTTTC--ACG-------------AAAAAAACGGACAAAAA-AAACCCGGCGAAAAAACCGAAC
CGGGAGCACGGTTTTTTTC-CTTTCCGAAAGAGGCACGCCCGTGCCCCTCGCAAAATCACAACCGTGCCT--CTCGTGGA
AGCAAAACCGTGACTCTCGTGTAAGGAAAAAAAC--AGAAAACATG-TTTTTTT--CGTTTCCGAGAGTCACGGCCGTGA
CTCTCGCAAAAACACAACCGTGCCTGTCGCGA-AAGCAAAACCGTGACTCTCGCGAAAG-AAAAAAAA-CAGAAAACGCG
TA-TTTTTTCCCTTT-CCGAGAGGCACGGCCGTGACTTTCGCGTAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTG
ACTCTCACGAACGAAAAAAAAC
>chr3D_2717
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---------------------CGTTGCAAAGAACACTCCACTTTCCCAGGTCGCGAC-----------AAGTGGCGCACA
TGCAGCGCGCCACTTGTCGCAACCC-GGAGTTTTCCC--TTTTTTCGTAGATCCGTTTATTCAAAACGTTTTATCTCTTA
AATCGTGCGTCCAAATCTCGAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGAT
AGGTTTTGGCGAACTTTTTTTT-CACG--------------A--------------AAAAACCAGACAAAAAAACTGTAC
CGGGAGCACGGTTTTTTCC-CTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCT--CTCGTGGA
AACAAAACCGTGACACTCGTGGAAGGAAAAAAAA-CAGAAAACACGTTTTTTTT-CCGTTTCCGAGAGGCACGGCCGTGA
CTCTCGCGAAAGCACAACCGTGCCTCTCGCGAGAAGCAAAACCGTGACTCTCGCGAAAG-AAAAAAA--CAGAAAACGCG
TA-TTTTTTCCCTTT-CCGAGAGGCACGGCTGTGACTTTCGCGTAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTG
ACTCTCACGAAAGAAAAAAA--
>chr2A_2717
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---------------------CGTTGGAAAGAACACTCCACTTTCTCATGTTGCGAC-----------AAGTGGCGTACA
TGCAGCGCACCACTTGTCGCAACCTGGGAGTTTT-CC--TTTTTTCGTAGATTCGTTTATTCAAAACGTTTTATTTTTTA
AACCGTGCGTCCAAATCTTGAACTGTTTTCATCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCACATGTTGAT
AGGTTTTGATGAACTTTTTTTA--ATG-------------AA--------------A-AAACCGGGCGAAAAAACCGAAC
CGGGAGCACGGTTTTTTCC-CTTTACGAAAGAGGCACGCCCGTGCCTCTCGTGAAATCACACCCCGTGCCTCTTTGTGGA
AGCAAAACCGTGACTCTCGTGGAAGGAAAAAAAA-CAGAAAACGCGTTTTTTTT--CGTTTCCGAGAGGCACGACCGTGA
CTCTCGCGAAAGCACAACCGTGCCTCTCGTGG-AAGCAAAACCGTGACTCTCGCGAAA-------AAAACAGAAAACGCG
TATTTTTTTCCCTTT-CTAAGAGGCACGGCCGTGACTCTCACGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTG
ACTCTCGCGAAAGAAAAAAAA-
>chr5A_2717
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---------------------CGTTGCAAAGAACACTCCACTTTCTTAGGTCGCGAC-----------AAATGGCGCACA
TGCAGCGCGCCACTTGTCACAACGTGGAAGTTTT-CCTTTTTTTTCGTAGATTCGTTTATTCAAAATGTTTTATCTCTTA
AACCGTGCGTCCAAATCTCGAACCGTTTTTACCATTGGATTTCTCGCGTTGAGATCTTTAAAACTAGATCCCATGTTAAT
AGGTTTTAACAAATTTTTTATTTCACG------------AAA--------------A-AAACCGGGCGAAAAA--CGAAC
CGGGAGCATGGTTTTTTCC-CTTTCCGAAAGAGGCACGCCCGTGCCTTTCGCAAAATCACAACCGTGCCT--CTCGTGGA
AGCAAAACCGTGACTCGTGT---AAGAAAAAAAA-CAGAAAACGCGTTTTTTTT-TCATTTCCGAGAGGCACTGCCGTGA
CTCTCGC------------------------A-AAGCACAACCGTGACTCTCGCGAAAG-AAAAAAAAACAAAAAACGCG
TATTTTTTTCTCTTT-CCGAGAGGCACGGCCGTGACTTTCGCGTAAGCACAACCGTGCCTCTCACGGAAGCAAAATCGTG
ACTCTCATGAATGAAAAAAAA-
>chr3A_2718
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----------------------GTTGCAAAGAACACTCCACTTTCTTAGGTCGTGAC-----------AAGTGGCGCACA
TGCAGCGTGTCACTTGTCGCAACCTGGGAGTTTTTAT--TTTTTTCGTAGATTTGTTTATTCAAAATGTTTTATCTCTTA
AACCGTGCGTCCAAATCTTGAACCGTTTTCACCATTGGATTCCTCGCGACGAGATCTTCAAAACTAGATCCCATATTGAT
AGGTTTTGACGAACTTTTTTTT-CACAAAAAAACCGGACAAA--------------A-AAACCGGGCGAAAAAACCGAAC
CGGGAGCATGGTTTTTTTCTCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACTGTGTCT--TTCATGGA
AGCAAAACCGTGACTCTCGTGAAAGGAAAAAAAA-TAGAAAACACGTCTTTTTT-CCGTTTCCTAGAGGCACGGACGTGA
CTCTCGTGAAAGCACAACCGTGCCTCTCGCGA-AAG-----------------------AAAAAAAA--CAGAAAACGCG
TA-TTTTTTCCCTTT-CCTAGAGGCACGGCCGTGACTTTCGCGTAAGCATAACCGTGCCTCTCGCGGAAGCAAAACCGTG
ACTCTCACGGAAGAAAAAAAAC
>chr7A_2752
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----------------------------------------------CAGGTTGCGAC-----------AAGTGGCGCACA
TGCAGCGCGCCACTTGTCGCAACCTGCGAGTTTT---TTCTTTTTCGTAGATCCGTTTATTCAAAACATTTTATCTTTTA
AACCGTGCGTCCAAATCTCGAACCGTTTTCATCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCTCATGTTGAT
AGGTTTTGACGAACTTTTTT---CATG------------AAA--------------A-AAACCGGGTG-AAAAACCGAAC
CGGGAGCACGG-TTTTTTTCCTTTCCGAAAAAGGCACGCCCGTGCCTCTCGCGAAATCACACCCGTGCCT--CTTGTGGA
AGCAAAACCGTGACTCTGATGGAAGGAAAAAAAAACAGAAAACACGTTTTTA-T-TCGTTTCCGAGAGGCACGGCCGTGA
CTCTCGCGAAAGCACAACCGTGCCTCTCGCGG-AAGCAAAACCGTGACTCTCGCGAAAG-AAAAAAAA-TAGAAAACGAG
TA-TTTTTTTCCTTT-CTGAAAGGCACGGCCGTGACTCTCACGAAAGCACAACCATGCCTCTCACGGAAGCAAAACCGTG
ACTCTCGAGGAAAAAAA-----
>chr6A_2752
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----------------------------------------------CAAGTTGTGAC-----------AAGTGGCGTACA
TGCAGCGCGTCACTTGTCGCAATCTGGGAGTTTT-CCCTTTTTTTCGTAGATCCGTTTATTCAAAACGTTTTATCTTTTA
AACCGTGCGTCCAAATCTCGAACCGTTTTCATCATTGGATTCCTGCC-TTAAGATCTTCAAAACTAGATCCCATGTTGAT
AGGTTTTGACGAACTATTTTTTTCATG-------------AA--------------A-AAACCGGGCGAAAAAACCGAAC
CGGGAGCACGGTTTTTTTCCCTTTCCGGAAGAGGCACGCCCGTGCCTCTCATGAAATCACACCCGTGCCT--CTTGTGAA
AGAAAAACCGTGACTCTCGTGGAAGGAAAAAAAC-CAGAAAACGCGTTTTTTTT-TCGTTTCCGAGAGGCACGACCGTGA
CTCTCGCGAAAGCACAACCGTGCCTCTCGCGG-AAGCAAAACCGTGACTCTCGCGAAAG-AAAAAAA--CAGAAAACGCG
TA-AATTTTTCCTTT-GTAAGAGGCACGGCCGTGACTCTCACGAAAACACAACCGTGCCTCTCGCGAAAGCAAAAACGTG
ACTCTCGCGAAAGAAAAAAAA-
>chr5D_2752
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----------------------------------------------CAGGTCGCGAC-----------AAGTGGCGCACA
TGCAGCGCGCCACTTGTTGCAACCAGGGAGTTTTCCC--TTTTTTCGTAGATCCATTTATTCAAAACGTTTTATCTCTTA
AACCGTGCGTCCAAATCTCGAACCGTTTTCATCATTGGATTCCTCACGTCGAGATCTTCAAAATTAGATCCCATGTTGAT
AGGTTTTGACGAACTTTTTTTT-CATG-------------AA--------------A-AAAACGGACGAAAAAACCGAAC
CGAGAGCACGG-TTTTTTCCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCT--CTCGTGGA
AGTAAAATCGTGACTCTCGTGGAAGGAAAAAAAAACAGAAAATGCG----TTTTTTCGTTTCCGAGAGGCACGGGCGTGA
CTCTCGCGAAAGCACACCCGTGCCTCTCGCGA-AAGCAAAACCATGACTCTCGCGAAAG-AAAAAAAA-TAGAAAACGCG
TA-TTTTTTCCCCTTTCCGAGAAGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAAGCGTG
ACTCTCGCGAAAGAAAAAAAA-
>chr7D_2752
CAAGTCACG-----------------------------------------------------------------------
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------------------------------------------------------------------ACAAGTGGCGCACA
TGCAGCACGCCACTTGTCGCAACCTGGGAGTTTTCCC--TTTTTTCGTTGATTCGTTTATTCAAAACGTTTTATCTCTTA
AACCGTGCGTCCAAATCTCAAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGAT
AGGTTTTGACGAACTTTTTCTT-CACG--------------A--------------A-AAAACGGACGAAAAAACCAAAC
CGGGAGCACGG--TTTTTTCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCT--CTCGTGGA
AGCAAAACCGTGACTCTCGTGGAAAGAAAAAAAA-CAGAAAATGCGTTTTTTTT-CTTTCCAA-AGAGGCACGCCCGTGA
CTCTCGCGAAAGCACAACCGTGCCTCTGGCAA-AAGCAAAACCGTAACTCTCGCGAAAG-AAAAAAAA-CAGAAAACACG
TA-TTTTTTCCCTTT-CCGAGAGGCACGGCCGTGACTCTCGCAAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTG
ACTCTCGCGAAAGAAAAAAAA-
>chr7A_2758
--------------------------------------------------------------------------------
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----------------------------------------------------GCGAC-----------AAGTGGCGTACA
TGCAGCGCGCCACTTGTCGTAACCTGGTAGTTTTCCC--TTTTTTCATAGATCCGTTTATTCAAAATATTTTATCTTTTA
AATCGTGCGTCCAAATCTCAAACCTTTTTCACCATTGGATTCCTTGCGTCGAGATCTTCAAAACTAGATCCCATGTTGAT
AGGTTCTGATAAACTTTTTTTT-CACG------------AAA--------------A-AAACCGGACGAAAAAATCGAAC
CGGGAGCACGGTTTTTTTCCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACACCCGTACCT--CTCGTGGA
AGCAAAACCGTGACTCTCGTGGAAGGAAAAAAAA-CAGAAAACGCATATTTTTTTCCGTTTCCGAGAGGCACGGCCCTGA
CTTTCGCGAAAGCACAACCGTGCCTCTTGCAG-AAGCAAAACCGTGACTCTCGTGAAAG-AAAAAAAA-CAGAAAACATG
TA-TTTT-TCCCTTT-TTGAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTTGCGGAAGCAAAACCGTG
ACTCTCGCGAAAGAAAAAAAA-
>chr7A_2758
--------------------------------------------------------------------------------
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----------------------------------------------------GCGAC-----------AAGTGGCGTACA
TGCAGCGCGCCACTTGTCGTAACCTGGGAGTTTTCCC--TTTTTTCATAGATTCGTTTATTCAAAATATTTTATCTTTTA
AATCGTGCGTCCAAATCTCAAACCTTTTTCACCATTGGATTCCTTGCGTCGAGATCTTCAAAACTAGATCCCATGTTGAT
AGGTTCTGATAAACTTTTTTTT-CACG------------AAA--------------A-AAACCGGACGAAAAAATCGAAC
CGGGAGCACGGCTTTTTTTCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACACCCGTACCT--CTCGTGGA
AGCAAAACCGTGACTCTCGTGGAAGGAAAAAAAA-CAGAAAACGCATATTTTTT-CCGTTTCCGAGAGGCACGGCCCTGA
CTTTCGCGAAAGCACAACCGTGCCTCTTGCAG-AAGCAAAACCGTGACTCTCGTGAAAGAAAAAAAAA-CAGAAAACATG
TA-TTTTT--CCCTTTTTGAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTTGCGGAAGCAAAACCGTG
ACTCTCGCGAAAGAAAAAAAA-
>chrUn_2762
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------------------------------------------------------------------ACAAGTGGCGCACA
TGCAGCGCGCCACTTGTCGCAACCTGGGAGTTTTTCC--TTTTTTCGTAGATCCGTTTATTCAAAACGTTTTATCTCTTA
AACCGTGCGTCCAAATCTCGAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGAT
AGGTTTTGACGAACTTCTTTTTTCACG-------------AA--------------A-AAACCGAGCGAAAAAACCGAAC
CGGAAGCACAG-TTTTTTTCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAATCACAACCGTGCCT--CTCGTGGA
AACAAAACCGTGACTCACGTGGAAGGAAAAAAAA-CAGAAAACGCGTTTTTTTT-CCGTTTCCGAGAGGCACGGCCGTGA
CTCTCGCGAAAGCACAACCGTGCCCCTCGCGA-AAGCAAAACTGTGACTCTCGCGTAAG-AAAAAAAA-CAGAAAACGCG
TA-TTTTTTTCACTTTTCGAGAGGCACGGCCGTGACTTTCGCGTAACCACAACCGTGCCTCTCGCGGAAGCAAAACCGTG
ACTCTCACGAAAGAAAAAAAAC
>SNPs
--S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS--------S----S--------------------------------SS-SS----------S------S-
-----------------------------------------------------S-------S--------S----S----
-----------------S-S----S-----------------S-S-----S---------S---S---------------
-----S---------------S------------------------------S---------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-----------------------S------------
-------------------------------------------------------------------------S------
------S-------------------------------------------------S-----------------------
----------------------------S--------S------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
------------S-------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
---------------------------S----S---------------------------S-------------------
--------------------------------------------------------------------------------
--S---------------------------------------------------------------S-------------
------------------------------------------S--S--------------------------------S-
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
----------------------------------------SS-------------------S------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S--------S------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS------------------------------------SSSSSSSSS--------------
-------------------------S------------------------------------------------------
----------S---------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------S-----------------------------------------------------------
-------------------------------------------------------------S-------S----------
--------------S--------------------------S--------------------------------------
-------------------------S----------S---------------------------S---------------
----------------------
>forward_221
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTCGCCTAGGAGTGCATTCA-------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_1563
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------GTCTCAGGACGGTGAGCTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>forward_311
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AAGCCCACGCAGTATTTTCG---------
--------------------------------------------------------------------------------
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----------------------
>reverse_1566
--------------------------------------------------------------------------------
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---------------------------------------------TCAGGACGGTGAGCTGCAAT---------------
--------------------------------------------------------------------------------
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----------------------
>forward_1308
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------GCTCAAGGCCGTGTACCAT----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2535
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------TGCAAAGGAATTCGGCTTGC------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
