>input_sequence_54689
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---------ATGGCGGCCACGGCGGCCGCAGCCGCAGTGCGCCCGTCTCTCCCCATCACGCCTCCGCGGCGCGAGCGCAG
CGCCGCCTTCTGCTCGCTTGCGCCGGCGACCAGCGCGCCGTCCACACGCTTGCCGCCGTCCTCTGTAAGTACGTGTTCGT
TTCC--------GTTCCTGCGTTATCCACTTGCACTCTTTTGATGGCCCGAACCCAATTTCAGCTTGAATTGGTTGTGAG
GTCTGATCACACAAAAATTGGAGTAGTAATC----------------------------------TATTCTGTGTGTTTA
ATTGGACACCGTGATTGAGCAAATTGTAGCAACTATTGCA----------------------------------------
---------------------------GTTTCTATATTGGGGAAATTTCAGATGCATATACTCAAGCCAGCGCTCTCCGT
GCTCTGACGACGTAACAATTTCAGTTCCCTTGCAGAGATGGCGCTGCACCGCCGTCACCCATCCCCGGAGCCGCCGGCTC
CACGGGCCGCGCTGCAGCCAGGCCGAAGTGGCGAGCAGCACCGTGGACGACGACGAGGCGTGCGAGCTGGTGAGGGGCAC
GGACGTCGTCATCGGGCAGGGCGACGACGAGAGCGTCCGCGCCTACCTCCTCGAGGCCGTCAAGAACAACAACGGCACCT
GCGTCCTCTTCCTCTCCGACGTCTTCGGCTTCGAGGACTCCGCCACCCGGGACTTCGCCTACCGCATCGCGTGCCACGGC
TACAAGTAAACCAACCGACCTTCCCCCCTTCTCCGGTCCAATCACTTTTTTCAGTTGCTCTGCGTTTGTCACCTCTTCAT
G----CTTGATCGATGGATGCTTGCATGCATGCAGCGTTCTGGTGCCGGACTTGTTCCGCGGGAACCCGTGGAAGAAGAG
CCTGCCGATGGACGGGTTCCAGGCGTGGCTCGCCGAGCAGGCCCCGGAGAGGGTGGCCGGCGACATCGACACGTGCAGGA
AATGGCTGGTGGACGACTTCCTGGCGGCCGCGCCGTCCAAGAAGCTGGGCGTGGTCGGGTTCTGCTACGGGGGCGGCCGC
CTCGTGGAGACGCTGGCGCGCGACGCGGACG---CCGCCTGCTTCAGCGCGGGCGTCTGCTTCTACGGGTCCCGGATGGA
CGCGTCGCTCGGGGCACAGATCGCGGCGCCGGTGCTGTTCGTGTGCGGCGACGGCGACCTGCTGTGCCCCGTGGAGACGG
TGCGGGAGCTGGAGAGGAGCGCGAGGGGCGCCAAGGCGGCCGTGTACGCCGGCAGGGGCCACGGGTTCGCGCACCGGCCG
GAGTCGCTGGAGGACGACGGCGACGCCGAGGAGGCGTTCGCGATGATGAAGAGCTGGTTGCACGACCACCTGCTTGCTTG
A-------------------------------------------------------------------------------
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>chr1D_1_TraesCS1D01G268700
TTTTTACAATTGCAAATATTTTCAAATTTTTGAATAAAATTTAAAATTTCCAAACATTTGGTGAAACTTAAAACAAATAA
AGTTTTCAAATATTTTCCAAGTTCTACACAAAAATTTATATTTCCATTTATAAAAATTGTCCAAAAAATTACCAATTTCC
AGACACGTTTTGAATTTTCCAAAAAAATTGAAATTTCTAAAGTTTTTCTGAAAC-TTTGAACAAAATTTTAAATTTCTTG
AATAAAACTTTAAATTTCCAAAGATATCTATTTTTTAATTTTTGAACTTTTTTTA-AAATAAAAATATTTTATGAAATTC
CAAACAATGCTTGAAAGCAAAAAGATTTTTG-AAAAAATACAAACTGTATCAAAACAAGAATAGTTCCTTAAATTCCAGA
CAATTTTGAAAGCACAATGTTTTTTGAAAATAACAATTTTTTTACAAAAGAAAGAGCATATTTTGAAATTCAAGTAGTTT
TTTAAATTTCAAACATTTTTGAAAATTAGAACTTCTTTGAAAAAAAAGAAACAGAAGAAAAACGGTTAAATATACAACAG
GAAAAAGGGAAAGGAAAAAAAACGAACATGAACCTCCCAGCATCCAGCGTCCAACTCTGCTGGCGTTAAATGGGCCGCCC
AGCCCGGTCGCTTCTATGCGACAAGCCGACTACTTGACGCATTATGCGTCAAGATAGAAGTTGCCAGGCCACAATGCCAG
TATTGCGCGGGGATAATTTT-TTTTTTGCGGTAATATAGCGCGGAGATTATAAACCATATCCAT----AGCTGCAGCGAG
ACCGTACTGTACGTGGTCACGACTCAGGACCTGCATCGCCCAAAACGCAACTGCCGTCC--------------------A
TTCGTCTGGACTTCATACAGGGAAACCCCACGTGTCAGGGGGAAAAATATCCACACCCGAGCC-TGTGTGGTGGCTGGCA
CTGGCAAGCACAGCAGGCTAT---------------CTCCCGCGCTCAGTTCCAGCCTCCGGAGCTGC-----TCGGAAG
CAGCACCCCATGGCGGCCACGGCGGCCGCAGCCGCAGTGCGCCCGTCTCTCCCCATCACGCCTCCGCGGCGCGAGCGCAG
CGCCGCCTTCTGCTCGCTTGCGCCGGCGACCAGCGCGCCGTCCACACGCTTGCCGCCGTCCTCTGTAAGTACGTGTTCGT
TTCC--------GTTCCTGCGTTATCCACTTGCACTCTTTTGATGGCCCGAACCCAATTTCAGCTTGAATTGGTTGTGAG
GTCTGATCACACAAAAATTGGAGTAGTAATC----------------------------------TATTCTGTGTGTTTA
ATTGGACACCGTGATTGAGCAAATTGTAGCAACTATTGCA----------------------------------------
---------------------------GTTTCTATATTGGGGAAATTTCAGATGCATATACTCAAGCCAGCGCTCTCCGT
GCTCTGACGACGTAACAATTTCAGTTCCCTTGCAGAGATGGCGCTGCACCGCCGTCACCCATCCCCGGAGCCGCCGGCTC
CACGGGCCGCGCTGCAGCCAGGCCGAAGTGGCGAGCAGCACCGTGGACGACGACGAGGCGTGCGAGCTGGTGAGGGGCAC
GGACGTCGTCATCGGGCAGGGCGACGACGAGAGCGTCCGCGCCTACCTCCTCGAGGCCGTCAAGAACAACAACGGCACCT
GCGTCCTCTTCCTCTCCGACGTCTTCGGCTTCGAGGACTCCGCCACCCGGGACTTCGCCTACCGCATCGCGTGCCACGGC
TACAAGTAAACCAACCGACCTTCCCCCCTTCTCCGGTCCAATCACTTTTTTCAGTTGCTCTGCGTTTGTCACCTCTTCAT
G----CTTGATCGATGGATGCTTGCATGCATGCAGCGTTCTGGTGCCGGACTTGTTCCGCGGGAACCCGTGGAAGAAGAG
CCTGCCGATGGACGGGTTCCAGGCGTGGCTCGCCGAGCAGGCCCCGGAGAGGGTGGCCGGCGACATCGACACGTGCAGGA
AATGGCTGGTGGACGACTTCCTGGCGGCCGCGCCGTCCAAGAAGCTGGGCGTGGTCGGGTTCTGCTACGGGGGCGGCCGC
CTCGTGGAGACGCTGGCGCGCGACGCGGACG---CCGCCTGCTTCAGCGCGGGCGTCTGCTTCTACGGGTCCCGGATGGA
CGCGTCGCTCGGGGCACAGATCGCGGCGCCGGTGCTGTTCGTGTGCGGCGACGGCGACCTGCTGTGCCCCGTGGAGACGG
TGCGGGAGCTGGAGAGGAGCGCGAGGGGCGCCAAGGCGGCCGTGTACGCCGGCAGGGGCCACGGGTTCGCGCACCGGCCG
GAGTCGCTGGAGGACGACGGCGACGCCGAGGAGGCGTTCGCGATGATGAAGAGCTGGTTGCACGACCACCTGCTTGCTTG
AACTGA----------TCTGATCAGCTGTCTTGTGTCGTGTGTACATTCTGTTTGCTGTG------TTCGTTGTTCTGTT
TGATTGCAAGTTCGCAACTGGTGAATAGACTAAAGAGGTGAAGTG--CATTGTTAACACTCAACTTTTTTTTAGCAGTTG
TTAACGGGAGCGGCTACCTGCCAATCGACTGACTCCAGAAACGGGTCAGTCGAATGACAAAAACAGCGAATAAAGAATTC
AGAAGAATGATTTGACTGACCCAAACTTAGGGCCAGTCGAAAAGCCCAGAAAGAGTAGCCTCTGTGTTTGTTTCTGTATT
TTCTGTCTTCTGGCCACAGTCCACATCTGAAACGGGCCTGAACCCGCTAAGCAACTAACCCACTTAACAAGATCCACCTA
ACGCACACAGC---ACTAGGTCTTCTTCCTCCC--CTTTCTTCCCGAAACCAGAACACTGAGCCGCCGCCATGGATGCTG
AAACAAACCAGAGATGATCTGATCTCTTCTGACCTCTATCTATATCTTGTGCTATCATTTCTTCCTCCCAAAACCCTTCT
CCTCCGGTCGCCCAAAGATCCCAAGCTGAAGAACCAGAAAAAATGGACGAGTTCTCATATCATTCTGAGATCTCAGATCT
GTCAAGGAAAAGAGCAAAACCGAGAAGAGACAAACCTAGAGATGAATCTGCTACACGTATTTCGAATGTAATAATGGTAA
TCCCCCACCACTTCTTTACTCAGGCATCATATCAGTTTCATGAAGAT-AATTGGGCATCACATCCCCTTTTACTAGATCA
GGAAAAAGTACACTTGCTCTTTTTCAGAAGATACACCTGACAGATAAAAAAATGTGTTATGTGTTCAG-AAACTAGTGAA
TGTGCTGGTGTGTTGTGGTGATTTCAAACATATAAGTAAAA-AGTTGCACATTCAGAGAACTAAAGTTGA----------
------------------------TGGTCAATTTGTTTCTAATTCTCGCAACAAATAGATTGCACTTCCTGAGTAGCAAA
GGAACATTTAGATATGCAGTT
>chr1B_1
TTTTTACAATTGCAAAAAAATTCAAATTTATGAATAAAATTTAAAATTTCCAAACATTTGGTGAAACTTAAAACAAATAA
AGTTTTCAAATATTTTCCAAGTTATAAACAAAATTTGATATTTCTATTTATTAAAATTGTCCAAAAATTTACCAACTTCC
AAACACGTTCTGAATTTTCTGAAAAAATTGAAATTTCCAAAGTTTTTCTCAAAAATTTGAACAAAAATTTTAATTTCTTG
AATAAAACTTTAAATTGCTAAAAACATCTGTTTTTTAATTTGTGAACTTTTTTAGTAAATAAAAATATTTTTTGAAATTC
CAAACAATTCTTGAAAGCGCAAAGATTTTTGAAAAAAATACAAACTGTATCAAAACAAGAACAATTCTTGAAATTCCAGA
TAATTTTGAAAGCACAAT-TTTTATGAAAATAACAACTTTTTTTACGAAAAAAAGCATG--TTTGAAATTCAAATA----
--------------ATTTTTGAAAATTAGAACTTCCTTGAAAAAAA-GAAACAGAAGAAAAACGGTCAAATATACAATAG
GAAAAAG------GAAAAATAACGAACATGAACCTCTCAGGATCCAGCGTCCAACTGTGCTGGCGTTAA-TGGGCCGCCC
AGCCTGGTCGATTCTATGCGACGAGCCGACTACTTGACGCATTATGCGTCAAGATAGAAGTTTCCAGGCA-----GCCAG
TATTGCGCGGAGATAAAAAACTTTTTTGCTGTAATATAGCGCGGAGATAATAAACCATATCCAT----AGCTGCAGCAAA
ACCGTACTGTACGCGGTCACGACTCACGACCTGCATCGCCCAAACCGCAACTTCTGTCC--------------------A
TTCGTCTGGACGTCATACACGGAAACCCCACGTGTCAGGAGGAAAAATATCCACACCCGAGCCTTGTGTGGTGGCTGGCA
CTGGCAAGCATAGCAGGCAGCTAGGCTATCTCCCGCCTCCCACGCTTGGTTCCAGCCACCGGAGCTGCCCTGCTCGGACG
CAGCACCCGATGGCGGCCACGGCGGCCGCAGCCGCGGTGCGCCCGTCGCCACC---------------GCGCGAGGGCAG
CGCCGCCTGCTGCTCGCTTGCGCCGGCGACCAGAGCGCGGCCCACACGCTT---GCCGTCCTCTGTAAGTACGTGTTCGT
TTCC--------GTTCCTGTGTTATCCACTTGCACT---TTGATGCCCCGAACCCCATTTTGGCTTGAATTGGTCGTGAT
GTCTGATCACC-------------------C----------------------------------TATTCTCTGTGTTTA
ATTGGACACCGTGATTGAGCAAACTATGGCAACTGTAGCA----------------------------------------
---------------------------ATTTCTATATTGGGAG-ATTTCAGATGCACGTA-----------GTTCACCGC
GCTCTGACGACGTAACAATTTCAGTTCCCGTGCAGAGATGGCGCTGCA---CCGTCACCCATCCCCGGAGCCGCCGGCTC
CACGGGCCGCGCTGCAGCCAGTCTGAAGTGGCGAGCAGCACCGTGGACGACGACGAGGCGTGCGAGCTGGTGAGGGGCAC
AGACGTCGTCATCGGGCAGGGCGACGACGAGAGCGTCCGCGCCTACCTCCTCGAGGCCGTCAAGAACAACAACGGCACCT
GCGTCCTCTTCCTCTCCGACGTCTTCGGCTTCGAGGACTCCGCCACCCGGGACTTCGCCTACCGCATCGCCTGCCACGGC
TACAAGTAAACCAACCGACCTCCCCCACTTCCCCGGTCCAATCACTTT-------------GCATTTGTCACCTCATCAT
GCATGCTTGATCGATGGATGCATTCCTGTATGCAGCGTTCTGGTGCCGGACCTGTTCCGCGGGAACCCGTGGAAGAAGAG
CCTGCCGATGGAGGGGTTGCAGGAGTGGCTCGCCGAGCAGGCCCCGGAGAGGGTGGCCGGCGACATCGACACGTGCAGGA
AATGGCTTGTTGACGACTTCTTGGCGGCGGAACCGTCCAAGAAGCTGGGCGTGGTCGGGTTCTGCTACGGGGGCGGCCGC
CTCGTGGAGACGCTGGCGCGCGACGC---CG---GCGCCTGCTTCAGAGCGGGCGTCTGCTTCTATGGGTCCCGGATGGA
CGCGTCGCTCGGGGCACAGATCACCGCGCCGGTGCTGTTCGTGTGCGGCGACGGCGACCCGCTGTGCCCCGTGGAGACGG
TGCGGGAGCTGGAGAGGAGCGCGAGGGGCGCCAAGGCGGCCGTGTACGCCGGCAGGGGCCACGGGTTCGCGCACCGGCCG
GAGTCGCTGGAGGACGACGGCGACGCCGAGGACGCGTTCGCGATGATGAAGAGCTGGTTCCACGACCACCTGCTTGCTTG
ATCTGA----------TC-----AGCTGTCGGGTGTCGTGTGTACATTCTGTTTGTTGTG------TT------------
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>chr1A_753
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------------------------------------TAGCGCGGAGATGATAAACCATATCCATCCATAGCTGCAGCAAG
ACCGTACTGTACGCGGTCACGACTCACGACCT--------------GCAACTTCTGTCCATTCTTTTTTTTTTTGGCGAA
TTCGTCTGGACGTCATACACGGAAACCCCACGTGTCAGTAAGAAAAATATCCACACCAGAGCC-TGTGTGGTGGCTGGCA
CTGGCAAGCACATCAGGCTAT---------------CTCCCGCGCTCGGTTCCAGCCTCCGGAGCTGC-----TCGAAAG
CAGCACCCCATGGCGGCCACGGCGGCCGCAGCCGCAGTGCGCCCGTCTCTCCCCATCACGCCTCCGCGGCGCGAGCGCAG
CGCCGCCTGCTGCTCGCTTGCGCCGGCGACCAGCGCGCGGTCCACACGCTTGCCGCCGTCCTCTGTAAGTACGTGTTCGT
TTCCTTAATTCCGTTCCTGTGTTATCCACTTGCACT---TTGATGCTCCGAACCCTATTTCGGCTTGAATTGGCTGTGAG
GTTTGATCACGAAAAAGTTGGAGACTGGTCGATAAAATTCTCTTAATCTGGATACCGGGGTACCTTATTCTGCGTGTTTA
ATTGGACACCGTGATTGCGGACACAGTAGCAATGATTGGTTAATAAATGGAAAAAATTCTAATCAGCATGTAATTGCGTG
TAACTCTTTGTATGTTTAGCATTATTGATTTCTATATTGAGAAAATTTCAGATGCACGCACTCAAGCCAGCGTTCTCCGC
GCTCTGACGACGTAACGATTCCAGTTCCCTTGCAGAGATGGCGCTGCACCGTCGTCACCCATGCCCGGAGCCGCCGGCTC
CAGGGGCCGCGCTGCAGCCAGGCCGAAGTGGCGAGCAGCACCGTGGACGACGACGAGGCGTGCGAGCTGGTGAGGGGCAC
GGACGTCGTCATCGGGCAGGGCGACGACGAGAGCGTCCGCGCCTACCTCCTCGAGGCCGTCAAGAACAACAACGGCACCT
GCGTCCTCTTCCTCTCCGACGTCTTCGGCTTCGAGGACTCCGCCACCCGGGACTTCGCCTATCGCATCGCATGCCACGGC
TACAAGTAAACCGACCAACC------ACTTCTCCGGTCCAATCTC--T-------------GCATTTGTCGCCTCTTCAT
G----TTTGATCGATGGATGCTTGCATGTATGCAGCGTTCTGGTGCCGGACTTGTTCCGCGGGAACCCGTGGAAGAAGAG
CCTGCCGATGGACGGGTTCCAGGCGTGGCTCGCCGGGCAGGCCCCGGAGAGGGTGGCCGGCGACATCGACACGTGCAGGA
AATGGCTGGTTGACGACTTCCTGGCGGCCGCGCCGTCCAAGAAGCTGGGCGTGGTCGGGTTCTGCTACGGGGGCGGCCGC
CTCGTGGAGACGCTGGCGCGCGACGC---CGATGCCGCCTGCTTCAGAGCGGGCGTCTGCTTCTACGGGTCCCGGATGGA
CGCGTCGCTCGGGGCACGGATCGCGGCGCCGGTGCTGTTCGTGTGCGGCGACGGCGACCCGCTGTGCCCCGTGGAGACGG
TGCGGGAGCTGGAGAGGAGCGCGAGGGGCGCCAAGGCGGCCGTGTACGCCGGCAGGGGCCACGGGTTCGCGCACCGGCCG
GAGTCGCTGGAGGACGACGGCGACGCCGAGGACGCGTTCGCGATGATGAAGAGCTGGTTCCACGACCACCTGCTTGCTTG
ATCTGAGCTGATCTGATC-----AGCCGTCGTGTGTCGTGTGTACATTCTGTTTGCTGTGCCTGTGTTCGTTGTTCTGGT
TGATTGCAACTGGTGA----------AGACTGAAGAGGTAAAGTGTACATTGTTAACACTCAACT---------------
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>chr6A_2463
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-----GGGAGCGGCTACCTGTCAATCGACTGACCCCAGAAACGGGTCAGTCGAATGACAAAAACAAGCAACAGAGAAATC
AGAAGAATGATTTGACTGGCCCAAACTTGGGGTCAGTCGAAAAGCCCAGAAA-----------GTGTTTGTTTCTGTATT
TTCTGTCTTCTGGCCGTAGCTCACATCTAAAACGGGCCTGGACCCGCTAAGAAACTAACCCACTTAACAAGATCCACCTA
ACGCACACAGC---ACTAGGTCTTCTTCCTCCT--CTTTCTTCCCGAAACCAGAGGACTGAGCCGCCGCCATGGATGCTG
AAACAAACCTGAGATGATCTAATCTCTTCTGACCTCTGTCTAGATCTTCTGCTAGCATTTCTTCCTCCCAAAACCCTTCT
CCTCCAGTCGCCTAGAGATCCCAAGCTGAAGAAATAG-AAAAATGGATGAGTTCTCATATCATTCTGAGATCTCAGATCT
GTCAAGGAAAAGAGCAAAGCCAAGAAGAGACAAACTCGGAGATGAATCTGCTACACGTATTTCAAAGGTAATAATGATAA
TCCCCCACCATTTCTTTGCTCAGGCATCATATTAGCTTCATGAAGATAAATTGGGCATCACAACCCCTTTTACTAGATCG
GGAAACAAACA------------------------------------------------------CAG-AAAATAGTGAA
TGAGCTGGTGTGTTGTGTTGATTTCAAACATATGAGTAGAA-GGTTGCACATTCAGAGAACTAAAGTTGCTTGTCCTGAA
AAATGCAGCTGCATGAATATAGTTGGGTAAATTGGTTTCTAATTCTCACAACAAATAGATTGCACTTCCTGAGTAGCAAA
GGAACATTTAGATATGCAGTT
>chr6A_2463
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-----GGGAGTGGCTACCTGTCAA---ACTGACCCCAGATATGGGTCAGTCGAATGACAAAAACAAGCAATAGAGAAATC
AGAAGAATGATTTGACTGACCCAAACTTGGGGTCAGTCGAAAAGCCCAGAAA-----------GTGTGTATTTCTATATT
TTCTGTCTTCTGGCCACAACCCACATCTAAAACGGGCCTGAACCCGCTAAGGAACTAACCCACTTAACAAGATCCACCTA
ACGCACACAAC---ACTAGGTCTTCTTCCTCCC--CTTTCTTCCTGAAACCAGAGGACTGAGCCGCCGCCATGGATGCTG
AAACAAACCTGAGATGATCTAATATCTTCTGACCTCTGTCTAAATCTTCTGCTAGCATTTCTTCCTCCAAAAACCCTTCT
TCTCCAGTCGCCCAGAGATCCCAAGCTGAAGAACCTGAAAAAATGGATGAGTTCTCATATCATTCTGAGATCTCAGATCT
GTCAAGGAAAAGAGAAAAACCGAGAAGAGACAAACCTGGAGATGAATCTGCTACACGTATTTCAAAGATAATAATAATAA
TCCCCCACCACTTCTTTGCTCAGGCATCATATTAGCTTCATGAAGATAAATTGGGCATCACAACCCCTTTTACTAGATCG
GGAAACAAACA------------------------------------------------------CAG-AAAATAGTGAA
TGAGCTGGTGTGTTGTGTTGATTTCAAACATATGAGTAGAA-GATTGCACATCCAGAGAACTAAAGTTGCTTGTCCTGAA
AAATGCAGCTGCATGAATATAGTTGGGTCAATTTGTTTCTAATTCTCGCAACAAATAGATTGCACTTCCTGAGTAGCAAA
GGAGCATTTAGATATGCAGTT
>chr3D_2536
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------------------------------------------------------------------------------TC
AGAAGAAAGATTTGACTGACCCAAACTTGGGGTCAGCCGAAAAGCCCAGAAA-----------ATGTTTGTTTCTGTATG
TTTTGTCTTCTGGCCACAACACACATCTAAAACGGGCTTGAACCCGCTAAGAAACTAACCCACTTAACAAGACCCATCTA
ACGCACACAGCACTACTAGGTCTTCTTCCTCCCCCCTTTCTTCCCGAAACCAGAGGACTGAGCCGCCGCCATGGATGGTG
AAACAAACCTGAGATGATCTGATCTTTTCTGATTTCTGTGTAGATCTTCTGCTTGCATTTCTTTCTGCCAAAACCCTTCT
CCTCCAGTCGCCTAGAGATCCCAAGCTGAAGAACCAGAAAAAATGGATGAGTTCTCGTATCATTCTGAGATCTCAGATTT
GTCAAGGAAAAAAGCAAAACCGAGCAGAGACAAACCCGGAGATGAATCTTCTACATGTATTTCAAAGGTAATATTGATAA
TCCCCCACCACTTCTTTGCTCAGGCATCATATCAGCTTCATGAAGATAAATTGGGCATCATATACCCTTTTACTAGACCA
GGAAACAAACA------------------------------------------------------CAGAAAAATAGTGAA
TGAGCTGGTGTGTTGTCGTGATTTGAAACATATGAGTAGAAAAGTTGCACATTCAGCGAACTAAAGTTGCTTGTCCTGAA
AATTGTTGCTGCATGGATATAGTTTGCTCAATTTGTTTCTAATTCTTGCAACAAATAGATTGCACTTCCTGAGTAGCAAA
GGAACATTTAGATATGCAGTT
>SNPs
----------------S-SS---------S--------------------------------------------------
-----------------------S--S------S--S-------S------S---------------S-------S----
-S-------S---------SS----------------S-----------S---S------------S---S---------
----------------S-S---S-S----S-----------S-----------SS----------------S--------
--------S---------SS-----------------------------------------S-S---S-S----------
S-----------------S----S------------S------SSSS--S---SSSSSSSS------------S--SSSS
SSSSSSSSSSSSSS---------------------S----------S-------------------S----------S--
-------SSSSSS------S----------------S---S---------------S------------S----------
----S-----S-----------S---------------------------------------S------SSSSSS-----
----------S-----SSSS---------S------------------S----------------------------S--
-------------S------------S-----------------S-------S-S-------------------------
-----------S-------S-------------------S----------------------------------------
-----------------------------------------------S--------------------------------
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--------S-----------------------------S-----------------------------------------
-------------------S----------------SSS------S---------S-----S------------------
----------SS----S------SSSSSSS--------------------------------------------------
-----------------------S--------------------------------------------------------
---------------------------S-------------S--------------SS--------------S------S
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----------------------------------------------------------------------S---------
---------------------S----S---------------------SSSSSSSSSSSSS--S----------------
----------------------------S---------------------------------------------------
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----------S---------------------------------------------------------------------
--------------------------SSS------------------S--------------------------------
-----------------------------------------------------------S--------------------
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--------------------------------S--------------------------S--------------------
-S----------------SSSSS-------S-----------------------------------------------S-
---------S-SSSS-SSSSSSSSSS-----S-------S-------------------------SSSSSSSSSSSSSSS
SSSSS---------------S------------S-------------------------------SSS----S----S--
----------------------------S---S-------------------SSSSSSSSSSS-----------------
-------------------S--------S----------------------S----------------------------
------------------------------------------------------SS------------------------
---------S---------------------------S----S-----S-----S-------------------------
-----S--------S--------------------------------S--------------------------------
-------------------------------------S-------------------------S--S---------S---
-----------------S-----------------S--------------------------------------------
-----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-------
--S------------------------------S----S------------------------------S----------
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>forward_715
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-------------------------------------------------------AGAAGTTGCCAGGCCACAAT-----
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>reverse_1894
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-----------------------------------------------------GTTGCTCTGCGTTTGTCACC-------
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>forward_1220
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GTGTTCGTTTCCGTTCCTGC------------------------------------------------------------
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>reverse_2637
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----------------------------------------------------------------------------GTTG
TTAACGGGAGCGGCTA----------------------------------------------------------------
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