>input_sequence_54575
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATGATCATCCTCTGC
ATCTGCTTCACATGTTGCATGCAGTTGAAAAGGGAAGCCACTCGCAAGATCATTTCCAGAGGCGCGTCAAGTTCAAGTGC
GTCTGTCCTGCTTGGCGACGTCTCGGCGATAGCAAATTTTGTGTCATCAAATGTCCTACCGGAGTACTGTCCACAGGTAA
C---CACCACCTTTTTTGTGCGAAAATTATCTTCAGTGGCATTGACATTTCCCCCTGTAATGATTTTGTGTGTTTTGACG
CCCCTTTGTCTGTAGAAGAAGGAGGTCTTATGCAAGGCTGCAGGTAATCTTTGTGCAAGTATCAAAGACGCGCTCGCCAA
GTTCATGCGTGAAGTCTCTGGACTTGAAGGCTGCAGCGGAGAAGCCGGCAAAAATAGCACTGAACTTGCAGTGAGAGAAG
ATAACAATGTGGAGAATGATGGTGACGAAATGGATGTCGACACGCTCCTAGATGATACTTCAGAGCTGGCAACTAAGGAC
ATGGAAGACACGTCGGTCGACGAGCATGAAGATGGAAGTTCCGGGGAGGGCGAGGAAGGTGTTTCGAGCAGTGCGGACTC
TGAAGATGATCCTGACTGGGAAGGTTACAGAGCCACGCGGAGTCGTTCTCGACAAAACAGCTTGACACGGAATAGCAGCA
ATAGCAAAGAGCCTGGAGATGGAAAAAATAAACCTAGAGATGTAACGACCACCGGTTCAGGAAATGATGATTCCAATATT
CCAGATGGAAACAATGATGGAGTGAACCAATGCAACGAAGAACATGAAAATGTCGCAAAACCAACATCGCCAAATGTTGA
TGAGGATGTGATGGTACCAACTTTGGTTGTGTCACAGGCAACGGAAGAACCTGGAGATGTAACAACCAATGTTTCCGCAA
ATGGTTCAGATATTCCAGAGGGAGATCAAGGCATAGTGAACCGGTGCAGCGAAGAAGAACATGTAAACGTCGCAAAACAA
AATCCATCCAGCGGTCATGTGGATGTGGTGATACCAACTTCAGCTGTGTCACTGCCAAGTACTCCTAGCACACAACAGAA
AAACACTGAAAAGGAGTGTTCCGTTGAGGATATGATGGCGATCCAGCCTTCCAGCATGCTGTTGGGCGGATCATCTATGA
TGGCGTTGGATGATAATGTGACCCCCTCAAAGGAAGACAAGAACATGGACATGACTCCTGCTATCAACTTTGTTGAAGGC
ACTCCTGTTGTTGATTTGAGTACCCCGGAAAGTTCAGACAGCGAGTGTAAGGTCGTAAGGACCGTAAGAAAACGTTCTCC
TGTCAATGGCCCTAAAACGCCCTCATGA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G232600
GCGCACAAAACCTCACCCAGCTGCATTTCTTCTTCTTGCATT---TGCCTGG-----TTAACGAGAAATCCCAATCCAGG
GTCCAACCCAGGGTCTCAGGCACCGCGCGTCGCCGGCGAGGATCATGAAGCTGTACCCTCACCTCACCGCCGGGCAGCGG
GAGATGATAGAGGGCGCCGGCTTCGGGGGGCTGCTGAGGCTCCAATGCCCAACCATCCCCGCCAGGCTCTCCACCTGGCT
CCTCCGGCGGTTCGACACCGACTCCTCGGAGCTGGTCATCCCCGGCAGGGGCAGGATTCCCGTCACCGTCGACAGCGTGC
ACCGGGTGCTCGGCATCCCCAAGAGCGGCCGCGACGTCGTGTACGGGCTGGACGACGAGAGCATCGCGTCCGTGCTGGAC
AAGCACGGCGTCGACAGGCCGCCCTCCATGGCGAGCCTCGAGAAGTCCATCAAGCTGATGAAGTCGGCGGACGAGCACTT
CCTCCGGACTTTCATAATGCTCGTGCTCTCGTCGTTCCTCTGCCCGACCAGCAGCCTGAAGATCAGCCCCCGGTGCTTCC
CCGCGCTGGTGAACATCGGGTCCATCAGGGAGCTCAACTGGTGCAAATTCGTTGTGGAGCAGCTGGAGAAGTGCGTTTCT
TCCCTCGGCAAGAAGAACAGCGCAGGGGGCTGCCTTTTCTATCTTGTGGTGAGCATTCTGCACAATGATT----CATGAG
AC----AAGGAATATGAATGAATCCTACAG----ATTTTATTTTATCTGCACTGCACACTGAA--TAGTCTAACACGTTT
AG--TTTTATCTTGCTATATACAGATTCTGTACCTAGACTCGCTTGATGTCCGTGGCATGGAGATACCTGACGGCACGCC
GAGAGTATCTGCGTGGGACAGGAAGCTGATGGACAAAGTCATCGAGATGGACATGAAGAACAATTGTTCTTTCGGAAAAT
GCTTCGTAAGTTCTTCTCTTGGAGTTTTTCTTCTGTAATA-TAGCAATGTTTTTTTGTCACTGTTATGATCATCCTCTGC
ATCTGCTTCACATGTTGCATGCAGTTGAAAAGGGAAGCCACTCGCAAGATCATTTCCAGAGGCGCGTCAAGTTCAAGTGC
GTCTGTCCTGCTTGGCGACGTCTCGGCGATAGCAAATTTTGTGTCATCAAATGTCCTACCGGAGTACTGTCCACAGGTAA
C---CACCACCTTTTTTGTGCGAAAATTATCTTCAGTGGCATTGACATTTCCCCCTGTAATGATTTTGTGTGTTTTGACG
CCCCTTTGTCTGTAGAAGAAGGAGGTCTTATGCAAGGCTGCAGGTAATCTTTGTGCAAGTATCAAAGACGCGCTCGCCAA
GTTCATGCGTGAAGTCTCTGGACTTGAAGGCTGCAGCGGAGAAGCCGGCAAAAATAGCACTGAACTTGCAGTGAGAGAAG
ATAACAATGTGGAGAATGATGGTGACGAAATGGATGTCGACACGCTCCTAGATGATACTTCAGAGCTGGCAACTAAGGAC
ATGGAAGACACGTCGGTCGACGAGCATGAAGATGGAAGTTCCGGGGAGGGCGAGGAAGGTGTTTCGAGCAGTGCGGACTC
TGAAGATGATCCTGACTGGGAAGGTTACAGAGCCACGCGGAGTCGTTCTCGACAAAACAGCTTGACACGGAATAGCAGCA
ATAGCAAAGAGCCTGGAGATGGAAAAAATAAACCTAGAGATGTAACGACCACCGGTTCAGGAAATGATGATTCCAATATT
CCAGATGGAAACAATGATGGAGTGAACCAATGCAACGAAGAACATGAAAATGTCGCAAAACCAACATCGCCAAATGTTGA
TGAGGATGTGATGGTACCAACTTTGGTTGTGTCACAGGCAACGGAAGAACCTGGAGATGTAACAACCAATGTTTCCGCAA
ATGGTTCAGATATTCCAGAGGGAGATCAAGGCATAGTGAACCGGTGCAGCGAAGAAGAACATGTAAACGTCGCAAAACAA
AATCCATCCAGCGGTCATGTGGATGTGGTGATACCAACTTCAGCTGTGTCACTGCCAAGTACTCCTAGCACACAACAGAA
AAACACTGAAAAGGAGTGTTCCGTTGAGGATATGATGGCGATCCAGCCTTCCAGCATGCTGTTGGGCGGATCATCTATGA
TGGCGTTGGATGATAATGTGACCCCCTCAAAGGAAGACAAGAACATGGACATGACTCCTGCTATCAACTTTGTTGAAGGC
ACTCCTGTTGTTGATTTGAGTACCCCGGAAAGTTCAGACAGCGAGTGTAAGGTCGTAAGGACCGTAAGAAAACGTTCTCC
TGTCAATGGCCCTAAAACGCCCTCATGATTAACAGCTCAGTGGCTGAAATGCTGATGAAGAAAAATGAAGCATTTGCATT
GGCAACTTTGGTAACCTTACTCTCATACTCTGCATTACATACTTTAACTTCATTGAGCCTGCATTTCCTTTTATGTTTAG
GTGTCATGTGAAGTAAGTACTATTTACATGAA------------------------------------------------
--------------------------------------------------------------------------------
--------GTAAGTACTATTTACATGAAGAAGAGACAAGTAGCTCAAGCTTTTAGCTTAGCTGATAAGTTGTACAGAAAC
GTGTCATGTTTGAACGGCATAATATTGGTGGAAATATTCAGTCCTTCCACTTCCTCCTTCGTTTTGCTGCTATATTTAAC
CAAGTTCTTTT-TCTTGTCATCGTTCTTGAACTAAGAGGATAAAACATTTACGCCATCCTTGCTAGCCGTTCTTTTCCTT
GCGAGTTAAAGCTGGAAGCCAAGCATTTTGCTTTTTTGTT-TGGAATTACTTCCTCTGTTCATCATTATAAGGTGTTGTG
GATATTTCAATA---TATATTACATACGAACTAAAATGAGTCAACAAACACACTATGCGTCTATATACATCCGATTCAGA
AA-AAGTTCGAACCTCTTATAATAGTGAACGGAGGGAGTACTTGGCACTTGTTCTGACTTTGCTA---CTGCAAACCTGG
CATTTTGCTCTGCATGTTTTGAATTT-CCTTTTCTTCTCTGCGTTTGAGCATGATTTGACATGATCACATATGTTCTCTT
CCATTG-TTTTGCACAGAAAACTGCAATAAGGGGCACCCAATCCACTGTCGAAAACGGTCTGCCGGGTGAGACATGATCA
GTGCCTGAGAATCCA--------ATTGAAGCCATGGTAAACTATGTATAATCTTCATCATTTCAG--CACAGAATGGATG
CCTAGCTGGCACTGTGAACT----ACTAAGCTATGTATAATATGTATTCTCTCTTGACCTGACCTGCTGGCTTGTAGTGT
TTGCATGTGGTA---CTCCCCCGGTTTCTGAACTATGCTGGCTTGTACTACTATAATATGAGCTCCATGGAT
>chr1A_1
GCGCGCAAAACCTCACCCGGCTGCATTTCTTCTTCTTGTATAGTATGCCTGA-----TTAACGAGAAATCCCAATCCAGG
GTCCGACCCAGGGCCTCAGGCACCGCGCGTCGCCGGCGAGGATCATGAAGCTGTACCCGCACCTCACCGCCGGGCAGCGG
GAGATGATAGAGGGCGCCGGTTTCGGGGGGCTGCTGCGGCTCCAGTGCCCCACCGTCCCCGCCAGGCTCTCCACCTGGCT
CCTCCGGCGGTTCGACACCGAGTCCTCCGAGCTGGTCATCCCCGGCCGGGGCAGGATCCCCGTCACCGTCGACAGCGTGC
ACCGGGTGCTCGGCATCCCCAAGACCGGCCGCGACGTCGTGTACGGGCTGGACGACGAGAGCATCGCCTCCGTGCTGGAC
AAGCACGGCGTCGACAGGCCGCCCTCCATGGCGAGCCTGGAGAAGTCCATCAAGCTGATGAAGTCGGCGGACGAGCACTT
CCTCCGGACCTTCGTAATGCTCGTGCTCTCGTCCTTCCTCTGCCCGACCAGCAGCCTGAAGGTCAGCCCCCGGTGCTTCC
CCGCGCTGGTGAACATCGGGTCCATCAGGGAGCTCAACTGGTGCAAATTCGTTGTGGAGCAGCTCGAGAAGTGCGTCTCT
TCCCTCGGCAAGAAGAACAGCGCAGGGGGTTGCCTCTTCTATCTCGTGGTGAGCATTCTGCACAATGATT----CATGAG
ACAAGGAAGGAATATGAATGAATCCTAAGTATAAA-TTTATTTTATCTGAACTGCACACTGAAGTTAGTCTAACACGTTT
AG--TTTTATTTTGC--AATGCAGATTCTGTACCTAGACTCGCTTGATGTCCGTGGCATGGAGATACCTCACGGCACGCC
GAGAGTATCTGCGTGGGACAGGAAGCTGATGGATAAAATCATCGAGATGGACATGAAGAACAATGGATCTTTCGGAAAAT
GCTTTGTAAGTTCTTCTCTTGGAGTTTTTCCTCTGTAATACTAGCAATGCTTTTTTGTAACTGTTATGATCATCCTCTGC
ATCTGCTTCATATGTTGCATGCAGTTGAAAAGGGAAGCCACTCGCAAGATCATTTCCAGGGGCGCATCAAGTTCAAGTGC
GTCTGTCCTGCTTGGCGACGTCTCGGCGATAGCAAATTTTGTGTCATCAAATGTCCTACCGGAGTACTGTCCACAGGTAA
C---CACCGCCTTTTTTGTGCGAAAATTATCTTCAGTGGCATTGACATTTCCCCCTCTAATGATTTTGTGTGTTTTAACG
CGCCTTTGTCTGTAGAAGAAGGAGGTCTTATGCAAGGCTGCGGGTAATCTTTGTGCAAGCATCACGGACGCGCTCGCCAA
GTTCATGCGTGAAGTCTCTGGACTTGAAGGCTGCAGCGGAGAAGCCAGCAAAAATGGCACTGAACTTGCAGTGAGAGAAG
ATAACAATGTGGAGAATGATGGTGACGAGATGGATGTTGACACGCTCCTAGATGATACTTCAGAGCTGGCAACTAAGGAC
ATGGAAGACACGTCGGTCGACGAGCATGAAGATGGAAGTTCCGGGGAGGGCGAGGAAGGTGTTTCGAGCAGTGCGGACTC
TGAAGATGATCCTGACTGGGAAGGTTACAGAGCCACGCGGACTCATTCTCGACAAAACAGCGTGACACGGAATAGCAGCA
ACAGCAAAGAGACTGGGGATGGAAAAAATAAACCTAGAGATGTAACAACCACTGGTTCAGGAAATGATGATTCCAATATT
CCAGATGGAAACAATGATGGAGTGAACCAATGCAGCAAAGAACATGAAAATGTCGCAAAACCAACATCGCCTAATGTTCC
TGAGGATGTGATGGTACCAACTTTGGTTGTGTCACCGGCAACGGAAGAACCTGGAGATGTAGCAACCAATGTCTCCGGAA
ATGCTTCAGATAATCCGGAGGGAGATCAAGGCAGAGTGAACCAGTGCAGCGAAGAAGAACATGTAAACGTCGCAAAACTA
AATCCATCCAGCGGTCATGTGGATGTGGTGATACCAACTTCAGCTGTGTCACTGCCAAGTACTCCTAGCACACAACAGAA
AAACAATGAAATGGAGTGTTCCGTTGAGGATAAGATGGCGATCCAGCCTTCCAGCACGCCGTTGGGTGGATCATCTGTGA
TGGCGTTGGATGATAATGTGACCCCGTCAAAGGAAGACAAGAAAATGGACATGACTCCTGCTATCAACTTTGTTGAAGGA
ACTCCTGTTGTTGATTTGAGTACCCCGGAAAGTTCAGACAGCGAGTGCACGGTCGTAAGGACCGTAAGAAAACGTTCTCC
TGTCAATGGCCCGAAAACGCCCTCATGATTAACAGCTCAGTGGCTGAGATGCTGATGAAGAAAAATGAAGCATTTCCATT
GGCAACTTTGGTAACCTTACTCCCATACTCTGCATTACATACTTTAGCTTCATTGAGCCTGCATTTCCTTTTATGTTTAG
GTGCCATGTGAAGTAAGTACTATTTACATGAA------------------------------------------------
--------------------------------------------------------------------------------
--------G--------------------AAGAGACAAGTAGCTCAAGCTTTTACCTTAGCTGATAAGCTGTACAGAAAT
GTGTCATGTTTGAACGGCATAATATTGGTGGAAATATTCAGTCCTTCCACTTCCTCCTTCGATTTGCTGTTATATTTAAC
CAAGTTCTTTTCTCTTGTCATCGTTCCTGAACTAAGAGGATAAAACATTTACGTCATCCTTGCTAGCCGTTCTTTTCCTT
GCGAGTTAAAGCTGGAAGCCAAGCATTTTTCTTTTTTGTTCTGGAATTACTTCCTCTGTTCATTATTATAAGATGTTGTG
GCTATTTCAATATACTAGATTACATACGAACTAAAATGAGTGAACAAACACACTATGCGTCTATATACATCCGATTCAGA
AAAAAGTTCGAACCTCTTATAACAGTGAACGGAGGGAGTACTTGGCACTTGTTCTGACTTTGCTA---CTGCAAACCTGG
CATTCTGCTCTGCATGTTTTGAATTTCCCTTTTCTTCTCTGCGTTTGAGCATGATTTGACCTAATCACATGTGTTCTCTT
CTATC-TTTTTCCACAGGAAACTGCAATAAGGGGCACCCAATCCACTGTCGAAAACGGTCTGCCGGGTGAGACATGATCA
GTGCCTGTCTGCCTGAGATGCTGATTGAAGCCATG---------GTATAATCTTCATCATTTCAG--CAGAG--TGGATG
CCTAGCTGGCACTGTGAACT----TCTAAGTTATGTATAATATGTATTCTCTCTTGACCTGGCCTGCTGGCTTGTAGTGT
TTGCATGTGGCA---CTCCCCTGGTTTCTGAACTATGCTGGCCTG---TACTATAATATGAGATCCATGGAT
>chr1D_1
GCGCGCAAAACCTCACCCAGCCGCATTTCGTCTTCTTGCATT---TGCCTGATTATTTTAACGAGAAATCCCAATCCAGG
GTCCGACCCAGGGTCTCAGGCACCGCGCGTCGCCGGCGAGGATCATGAAGCTGTACCCGCACCTCACCGCCGGGCAGCGG
GAGATGATAGAGGGCGCCGGCTTCGGGGGCCTGCTGAGGCTCCAGTGCCCCACCGTCCCCGCCAGGCTCTCCACCTGGCT
CCTCCGGCGGTTCGTCACCGACTCCTCCGAGCTGGTCATCCCCGGCCGGGGCAGGATCCCCGTCACCGTCGACAGCGTGC
ACCGGGTGCTCGGCATCCCGAAGACCGGCCGCGACGTCGTGTACGGGCTGGACGACGAGAGCATCGCGTCCGTACTGGAC
AAGCACGGCGTCGACAGGCCGCCGTCCATGGCGAGCCTGGAGAAGTCCATCAAACTGATGAAGTCGGCGGACGAGCATTT
CCTCCGGACCTTCGTGATGCTCGTGCTCTCGTCCTTCCTCTGCCCGACCAGCAGCCTGAAGATCAGCCCCCGGTGCTTCC
CCGCGCTGGTGAACATCGGGTCCATCAAGGAGCTCAACTGGTGCAAATTCGTCGTGGAGCAGCTCGAGAAGTGCGTTTCT
TCCCTCGGCAAGAAGAACAGTGCAGGGGGATGCCTCTTCTATCTTGTGGTGAGCATTCTGCACAATGATTGATTCATGAG
AC----AAGGAATATGAATGAATGCTACAG----A-TTTATTTTAT--------CACACTGAAGTTAGTCTAACACGTTT
CATATTTTATTTTGC--TATACAGATTCTGTACCTAGACTCGCTTGATGTCCGTGGCATGGAAATACCTGACGGCACGCC
GAGAGTGTCTGCGTGGGACAGGAAGCTGATGGACAAAGTCATCGAGATGGACATGAAGAACAATGGTTCTTTCGGAAAAT
GCTTTGTAAGTTCTTCTCTTGGAGTTTTCCCTCTGTAA---TAGCAATGCTTTTTTGTAACTGTTATGATCATCCTCTGC
ATCTGCTTCATATGTTGCATGCAGTTGAAAAGGGAAGCCACTCGCAAGATCATTTCCAGGGGCGCGTCAAGTTCAAGTGC
GTCTGTCCTGCTTGGCGACGTCTCCGCGATAGCAAATTTTGTGTCATCAAATGTCCTACCGGAGTACTGTCCACAGGTAA
CCACCACCACCTTTTTTGTGCGAAAATTATCTTCATTGGAATTGACATTTTCCCCTCTAATGATTTTGTGTGTTTTGACG
CGCCTTTGTCTGTAGAAGAAGGAGGTCTTATGCAAGGCTGCAGGTAATCTTTGTGCAAGCATCACGGACGCGCTGACCAA
GTTCATGCGTGAAGTCTCTGGGCTTGAAGGCTGCAGCGGAGAAGCCGGCAAAAATAGCACTGAACTTGCAGTGAGAGAAG
ATAACAATGTGGAGAATGATGGTGACGAGATGGATGTCGACACGCTCCCAGATGATACTTCAGAGCTGGCAACTAAGGAC
ATGGAAGACACGTCGGTCGATGAGCATGAAGATGGAAGTTCCGGGGAGGGCGAGGAAGGTGTTTCGAGCAGTGCGGACTC
TGAAGATGATCCTGACTGGGAAGGTTACAGAGCCACGCGGAGTCGTTCTCGACAAAACAGCGTGACACGGAATAGCAGCA
ATAGCAAAGAGCCTGGAGATGGAAAAAATAAACCTAGAGATGTAACGGCCACTGGTTCAGGAAATGATGATTCCAATATT
CCAGATGGAAACAATGATAGAGTGAACCAATGCAGCGAAGAACATGGAAATGTCGCAAAACCAACATCGCCTAATGTTCA
TGAGGATGTGATGGTATCAACATTGGTTGTTTCACAGGCAACAGAAGAACCTGGAGATGTAACGACCAATGTTTCCGGAA
ATGGTTCAGGTATTCCAGAGGGAGATCAAGGCATAGTGAACCGGTGCGGCGAAGAAGAACATGTAAACGTCGCAAAAGTA
AATCCATCCAGCGGTCATGTGGATGTGGTGATACCAACTTCAGCTGTGTCACTGCCAAGCACTCCTAGCACACAACAGAA
AAACACTGAGAAGGAGTGTTCCGTTGAGGAAATGATGGCGATCCAGCCTTCCAGCACGCTGTTGGGCGGATCATCTGTGA
TGGCGTTGGATGATAATGTGACCCCCTCAAAGGAAGACAAGAACATGGACCTGACTCCTGCTATCAACTTTGTTGAAGGA
ACTCCTGTTGTTGATTTGAGTACCCCGGAAAGTTCAGACAGCGAGTGCACGGTCGTAAGGACCGTAAGGAAGCGTTCTCC
TGTCAATGGCCCTAAAACGCCCTCATGATTAACAGCTCAGTGGCTGAGATGCTGATGAAGAAAAATGAAGCATTTGCATT
GGCAACTTTGGTAACCTTACTCTCATACTCTGCATTACATACTTTAACTTCATTGAGCCTGCATTTCCTTTTATGTTTAG
GTGCCATGTGAAGTAAGTACTATTTACATGAAGTAAGTACTCCCTCCGTCCCAAAAAACTTGTCCCTCAAATGGTTGTAT
CTAGCACCAAGTTAGTGCTAGATACATCCATTTGAGGAACAAGCTTGGGACAAGTTTTTTCGGACGGAGGGAGTACTATT
TACATGAAG--------------------AAGAGACAAGTAGCTCAAGCTTTTACCTTAGCTGATAAGTT----------
----------------GCATAATATTGGTGGAAATATTCAGCCCTTCCACTTCCTCCTTCGCGTTGCTGTTACATTTAAC
CAAGTTCTTTT-TCTTGTCATCGTTCCTGAACAAAGAGGATAAAACATTTACGTCATCCTTGCTAGCCGTTCTTTTCCTT
GCGAGTTAAAGCTCGAAGCCAAGCATTTTGCTTCCTTGTT-TGGAATTACTTCCACTGTTCATTATTATAAAATGTTGTG
GATATTTCAATA---TAGATTACATACGAACTAAAATGAGTGAACAAATGCACTATGGGTCTATATACATCCGACTCAGA
-AAAAGTTCGAACCTCTTATAATAGTGAACGGAGGGAGTACCTGGCACTTGTTCTGACTTTGCTAGTACTGCAAACCTGG
CATTTTGCTCTGCATGTTTTGAATTTCCTCTA-CTTCTCTGCGTTTGAGCATGATTTGACCTAATCACATATGTTCTCTT
CCAGATTTTTTGCACAGAAAACTGCAATAAGGGGCACCCAATCCACTGTCGAAAACGGTCTGCTGGGCGAGACATGATCA
GTGCCTGAGAATCCA--------GTTGAATCCATG---------GTATAATCTTCATCATTTCAGCACAGAG--TGGATG
CCTAGCTGGCACTGTGAACTCCGTACTAAGCTATGTATAATATGTATTCTCTCTTGACCTGACCTGCTGGCTTGTAGTGT
TTGCATGTGGCAGTACTCGTCTAGTTTCTGAACT--------------------------------------
>SNPs
----S----------------------------------------------S----------------------------
----S-----------------------------------------------------S---------------------
--------------------------------------------S-----S---S-------------------------
---------------------------S------------------S----------S----------------------
------------------------S-------------------------------------------------------
--------------------------------------S-----------------------------------------
---------S---S-------------------S----------------------------------------------
----------------------------------------------------------------S---------------
-----------------------------S-----S--------------------------------------------
-----------------------------------S-------------S------------------------------
----------S----SS---------------------------------------------------------------
----------------------------------------------------------------S---------------
----S-------------------------S------------------S--------S---------------------
----------S------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-S---------------------------------------------------------S----SS--------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
----------------------------------------------------S---------------------------
----------------------------------S------------------------------------S------S-
-----------------------------------------------------------------------------S--
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------S-------------------S---
-------------------------------------------------------------------------------S
-----------------------------------------------S-S------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------SSSSSSSSSSSSSSSSSSSS-------------------------S------------------------S
-------------------------------------------------------------S-------S----------
--------------------------S--------------------------S--------------------------
---------------------------------------------------------------S--------S-------
-----------------S-----------------------S--------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-S-----------------
----SS--------------------------------------------------------------------------
-----------------------------------SSSSSSSSS-------------------------S--SS------
--------------------------------------------------------------------------------
----------S----------S--------------------S--SSS--------------S---------
>forward_494
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCACTT
CCTCCGGACTTTCA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_1469
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AATGGATGTCGACACGCTCC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_514
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TAATGCTCGTGCTCTCGTCG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2137
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGCTGTTGGGCGGATCATC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_1257
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GGCATTGACATTTCCCCCTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2854
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CCATCCTTGCTAGCCGTTCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
