>input_sequence_54574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ATGGCTCCTCTTTCGTCCAAGGCCGTTGCACTCGTTGCACTGTCCTCCCTCCTCGT
CACCTACGCC---GCCGGCGCCGGGAACTTCAACGATTCCGCCTTCACCGCCGACCCCAACTGGGAGGACGCCAGGGCCA
CCTGGTACGGCGCGCCCACCGGTGCCGGCCCCGACGACGACGGTACGTCCGTATGC----GCCGGTGCA-TGCATGGCGC
CGCGGCCTTGGC------TTAATTGATCGTTTGTGTAATAACATGCAGTAATCGATGTGCATTCAGGTGGTGCGTGCGGG
TTCAAAAACACCAACCAGTACCCCTTCTCCTCCATGACATCGTGCGGCAACGAGCCCATCTTCAAGGACGGCAAGGGATG
CGGCTCCTGCTACCAGGTAGCTAGACTAGCTCGTTGATTTTTTCATGACGAGGGTTATTATTTCTTAAAAAAACGACGAT
CGCCATATTGTTGGTGCTTTGCCCCTGCT----GTGGTGGAAATGGAGCTGGTGAAACAGTGTTAATCTTGACTTCTGAT
CGTTTACTATTGCCTTTTCAGATACGATGCACCAACGACCAGTCCTGCTCCGGCAACCCGGAGACGGTGGTCATCACCGA
CATGAACTACTACCCGGTTGCCAAGTACCACTTCGACCTGAGTGGCACCGCCTTCGGCGCCATGGCCAAGCCCGGCCTCA
GCGAGAAGCTCCGCCACTCGGGCATCATCGACATCCAGTTCAAGAGGTCGGTGGCATTTCATCATA---TCGTTGCACGA
ATCCTATCTGGCCCTACCTGAACGATGAACAGTGTCATACTCTATATAACTAGTGCTT---TTGCCCAACAAAACTTTCA
CGACAACGACCGGTTTAACTGGGACCCAAATAGATTCGCAGCGAATAA---TACTCTATTTTGAGTACCGTCGCCTCACA
CTTATTTGCCGTCGTCCCGGCTCGGTTACAGACTAAGTAACAATGGCACATGGGTTGCTGATTGCTTCTGCTGATGATTG
ATGCAGAGTGCCGTGCGAGTTCCCCGGTCTCAAGGTGACGTTCCACGTGGAGCAGGGGTCGAACCCGGTGTACTTCGCGG
TGCTGGTGGAGTACGAGGACGGCGACGGCGACGTGGTGCAGGTGGACCTCATGGAGGCCAACTCCGGGACGTGGACGCCG
ATGCGCGAGTCATGGGGGTCTATCTGGCGGCTGGACTCCGGCCACCGCCTCCAGGCGCCCTTCTCCATGCGCATCACCAA
CGAGTCCGGCAAGACGCTGGTGGCCGACAAGGTCATCCCGGCCAACTGGGCGCCCAGCACCTTCTACCGTTCCATCGTCC
AGTACAGCTGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G226000
TCACGTACTATCAGGTAGCAGCATCATTGTGCTCGTGAATGAAATCGCAAGTGCCCTTAA---TTTTTCCCCAACGAATC
CGCAGCGTGTTAATTAGGTACCTCTACGCAACTTCGTCCTACGTGATTCGGTGGTTGCAGAGACACGCCTGTTAAACAGG
TTGGTTCCGATGATTGATCCCAACAAGAGTCAGTCAGGCCAACGTCCACGCTTTAATTGTATTGCAAACT----------
TGCTGTTCCCGCCCGAATCTCTCCTTCCTAACGCGGCATCATCGCCAAAGGCAGCACTTAGCTGTACGTTCCTGAAAGAG
AATACGATTTTCCAGAGTAGTACTG------TGCGTATCTCTTTCTAGCAGAAATGGAACACAGCTCATAGCATCAGCGA
GAGCAGGGCAGGTAGGGATGCAAGCTGACGGCGTCCGCATGTCCACGACCGTCCTCAATGCAAAAAATTACATGACCGCG
TCCGCATGTCCAC-ACTGTCCGTGAACAGAAAAATGCAGACGATGT------------CTAAGGGCGAGCTTTGCTACAT
CTACGTAAAAAAGTCTTATG------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AAACTTATGTATG--------------------------------------------
-----------------------------------------------------------AGCTTATGCGGTCTGATTTGG
TTAAAAGTAAAAACGGCTCGGGCCCACCCGTAAAATTCAAGGGGAAGGTGAGTAGTTTATAGAAAGGAAAGTTAAGTAAC
ATCATATCTAAGAGGTTACGTGGGTGTAGCATTTTTGCTCAAGGGCAGGTACGCACTACGCAGTGTGGACAGAAACATGC
AATGTGTAACTGCCGATGCCGAGCCGTGATTTCTCGCAGGATTTGCTCCCGTAGCCATGTGACCTCTACACAAAGCACGT
CGTCGGGTGCAACAACCGTGGATGGCGATCGCGTCGCCCTGCACTGCGCCTGCCTATAAATACCCCGGCAATATAGTTAC
TCCCAGAACATCAAAGCATA----GCTCAGCCCTCCAGCCCGACCCGGT--CAGTGCGCTGGTACACTACCCCCACAAGC
TCGAAGAAGCAGCGGTACTTTAACATGGCTCCTCTTTCGTCCAAGGCCGTTGCACTCGTTGCACTGTCCTCCCTCCTCGT
CACCTACGCC---GCCGGCGCCGGGAACTTCAACGATTCCGCCTTCACCGCCGACCCCAACTGGGAGGACGCCAGGGCCA
CCTGGTACGGCGCGCCCACCGGTGCCGGCCCCGACGACGACGGTACGTCCGTATGC----GCCGGTGCA-TGCATGGCGC
CGCGGCCTTGGC------TTAATTGATCGTTTGTGTAATAACATGCAGTAATCGATGTGCATTCAGGTGGTGCGTGCGGG
TTCAAAAACACCAACCAGTACCCCTTCTCCTCCATGACATCGTGCGGCAACGAGCCCATCTTCAAGGACGGCAAGGGATG
CGGCTCCTGCTACCAGGTAGCTAGACTAGCTCGTTGATTTTTTCATGACGAGGGTTATTATTTCTTAAAAAAACGACGAT
CGCCATATTGTTGGTGCTTTGCCCCTGCT----GTGGTGGAAATGGAGCTGGTGAAACAGTGTTAATCTTGACTTCTGAT
CGTTTACTATTGCCTTTTCAGATACGATGCACCAACGACCAGTCCTGCTCCGGCAACCCGGAGACGGTGGTCATCACCGA
CATGAACTACTACCCGGTTGCCAAGTACCACTTCGACCTGAGTGGCACCGCCTTCGGCGCCATGGCCAAGCCCGGCCTCA
GCGAGAAGCTCCGCCACTCGGGCATCATCGACATCCAGTTCAAGAGGTCGGTGGCATTTCATCATA---TCGTTGCACGA
ATCCTATCTGGCCCTACCTGAACGATGAACAGTGTCATACTCTATATAACTAGTGCTT---TTGCCCAACAAAACTTTCA
CGACAACGACCGGTTTAACTGGGACCCAAATAGATTCGCAGCGAATAA---TACTCTATTTTGAGTACCGTCGCCTCACA
CTTATTTGCCGTCGTCCCGGCTCGGTTACAGACTAAGTAACAATGGCACATGGGTTGCTGATTGCTTCTGCTGATGATTG
ATGCAGAGTGCCGTGCGAGTTCCCCGGTCTCAAGGTGACGTTCCACGTGGAGCAGGGGTCGAACCCGGTGTACTTCGCGG
TGCTGGTGGAGTACGAGGACGGCGACGGCGACGTGGTGCAGGTGGACCTCATGGAGGCCAACTCCGGGACGTGGACGCCG
ATGCGCGAGTCATGGGGGTCTATCTGGCGGCTGGACTCCGGCCACCGCCTCCAGGCGCCCTTCTCCATGCGCATCACCAA
CGAGTCCGGCAAGACGCTGGTGGCCGACAAGGTCATCCCGGCCAACTGGGCGCCCAGCACCTTCTACCGTTCCATCGTCC
AGTACAGCTGAAGCTGCTGAACTGAAC-----TCATCATTTGGAATCAT-GCATGCATTGGCTTGATTTGGTATTTGTAC
TACCATGGATCGTTTTGCATGG----GTACTACTGAGGAGGTTTTTGATTAA--TTAAGGTTGGGTC----ATCGGGTGT
CATGTAGGCGTCGTCGTGCATGTGTGTCTTGAATACGTCGGTGGGATATGGAGGAGGGGCACTTTTGCATGTGCACTCCC
GCGCCCACCGTCACTGTACCAGTGTGTAAGCAGACCATAAGTTATTACTGTTTGTGTGTACTCCTGCTTATCTGTTGTCC
CTCCCTCAGTCTCTCATCAGTACTGCCAGTACTCATCAGTTCGTATTGCCCTAGTACTTATCAAACTTGATTATGCGCGC
CAAAGATTAATGA-ACGCCGGGAATTTGGTCCTGACTTTCTAACCAACGTACGGCCACGGCCAGTGGAAATTCTACTCTG
TTCCGGTAGATTCGACGATCCTTGGAAAGGTCGGTACGTCATAATTTTTGCAACGACCAAGCAAAGCACGCAGTCGAGTA
TGTCTGCGTCATATCAGTTACCACCGACTAGCTAGTGCGTCTATCCAACGCAAAGGGTGCCAATCTCCCGGCACATGTCT
TTCACTTTCAAAAGCTCCTTTTCTTTCCGTATGGTAACCACTAACCAATTCGTTCGTTCTATAACCGTCAGGCTTAGCTA
C--CTAATGATAGTGAATGATTCGGAGTAACTTTTACACGAGACGAGAGCCGGCAACATCGCCGCCTAAAAGTTCACTCT
ATCTAAGCTGGCCTTCCCTTTCCTAAGAAAGTTGTTTAAC---TAGCATGCATGCTAGTAGAGACCGCTGGATCGTCGCC
GTAAATACTGGCGCTAACCTCTCCAAATCGCCGAGCTAGTCTTTGGTCATGTTGTCCACTTAAACTACTCCAAATGTAAG
ACTTTCCATTTCATAAAAATGTAAGACTTTTCGGCTGTTATCGACAAGGTCAAGTCGGTTCCGATAGAAGAGC
>chr1D_9
--------TATCAGGTAGCAGCATCATTGTGCTCGTGAATGAAATCGCAAGTGCCCTTAA---TTTTCCCCCAACGAACC
CGCAGCGTGTTAATTAGGTACCTCTACGCAACTTCGTCCTAGATGATTCGGTGGTT----------GCCTGTTAAACAGG
TTGGTTCCGATGATTGATTCCAACAAGAGTCAGTCAGGCCAACGTCCACGCTTTAATTGTATTGCAAACT----------
TGCTGTTCCCGCCCGAATCTCTCCTTCCTAACGCGGCATCATCGCCAAAGGCACCACTTAGCTGTACGTTCCTGAAAGAG
AATACGATTTTCCATAGTA---CTGTGCGTATGCGTATCTCTTTCTAGCAGAAATGGAACACAGCTCAGCGCATCAGCCA
GAGCAGGGCAGGTAGGGATGCAATGGGACGGCGTCCGCATGTCCACGACCATCATGGAAGC-AAAAATTACAGGACAGCG
TCCGCATGTCCACGACTGTCTGTGAACAGAAAAATGCAGACGATGTCCGCCTTCACCCCTAAGGGCGAGCTTTGCTACAT
CTACGCAAAAGTTTTATGAAACTTATAAAGAAATTGAATTTTTTGTCCCACTTTTTTTTCTAACTTTGATCATTTGCCCA
CCCCTGAGAATTACAGGTGGGGTCGGGGACACTTGCCATTGAGACAAGTCTGGAGCAAATTATCAAACCCCATATAAAGT
GGGACAAAAGATCCAATCCTCATAAACTTATATACG--------------------------------------------
-----------------------------------------------------------AGCTTACATAGTCTGATTTGG
TTGGAAGTAAAAAACGCTTAGGCCCACCCGTGAAATTCAAGGGGAAGGTGATTCGTTTCTAGAAAGGAAAGGT-CGTAGC
ATCATG--TAAGAGGTTACTTAGGTGTAGCATTGTTGCTCAAGGGCAGGTACGCACTACGCAGTGTGGACAGAAACATGC
AATGTGTAACT------GCCAAGCCGTGATTTCTCGCAGGATTTGCTCCCGTAGCCATGTGACCCCTACACAAAGCACGT
CGTCGGGTGCAACAACCGTGGATGGCGATCGCGTCGCCCTGCACTGCGCCTGCCTATAAATACCCCGGCAATAT-GATAC
TCCCAGAACATCAAAGCATA----GTTGAGCCTCCCAGCCCGACCTGGTCACAGTGCGCTGGTACACTACCCCCACAAGC
TCGAAGAAGCAGTGGTACTTTGACATGGCTCCTCTTTCGTCCAAGGCCGTTGCACTCGTTGCACTGTTCTCCCTCCTCGT
CACCTACGCC---GCCGGCGCCGGGAACTTCAACGACTCCGCCTTCACCGCCGACCCCAACTGGGAGGACGCCAGGGCCA
CCTGGTACGGCGCCCCCACCGGCGCCGGCCCTGACGACGATGGTACGTCTGCATGC----GCCGTGCCGGTGCATGGCGC
CGCGGAGTTCTCTCTCCATTAATTGAACGTTTGTGTAATGACATGCGGTGATGGATGTGCATTCAGGTGGTGCCTGCGGG
TTCAAGAACACCAACCAGTACCCCTTCTCCTCCATGACATCGTGCGGCAACGAGCCCATCTTCAAGGACGGCAAGGGGTG
CGGCTCCTGCTACCAGGTAGCTAGACTAGCTCGTT---------------------------------------------
CGTCATATTGTTGGTGCTTTGCCCCTGCCGTACGTGGTGGAAATGGAGCTGGTGACACAGTGCTAATCTTGACTTCTGAT
CGTTTACTATTGCCTTTCCAGATACGATGCACCAACGACCAGTCCTGCTCCGGCAACCCGGAGACGGTGGTCATCACCGA
CATGAACTACTACCCGGTTGCCAAGTACCACTTCGACCTGAGCGGCACCGCCTTCGGCGCCATGGCCAAGCCCGGCCTCA
GCGAGAAGCTCCGCCACTCGGGCATCATCGACATCCAGTTCAAGAGGTCGGTGGCATTTCATCATA---TCGTTGCACGA
ATCCTATCTGGCCCTACGTGAACGATGAACAGTATCATACTCTATATAACCAGTGCTT---TTGCCCAACAAAACTTTCA
CGACCGCGACCGGTTTAACTGGGACCCAAATAGATTCGCTGCGAATAA---TACTCTATTTTGAGCACCGTCGCTTCACA
CTTATTTGCCGTCGTCCCGGCTCGGTCACAGACCAAGTTACAATGGCACATGGGTTGCTGATTGCTGCTGCTGATGATTG
GTGCAGGGTGCCGTGCGAGTTCCCCGGTCTCAAGGTGACCTTCCACGTGGAGCAGGGGTCGAACCCGGTGTACTTCGCGG
TGCTGGTGGAGTACGAGGACGGCGACGGCGACGTGGTGCAGGTGGACCTCATGGAGGCCAACTCCGGGACGTGGACGCCG
ATGCGCGAGTCATGGGGCTCCATCTGGCGGCTCGACTCCGGCCACCGCCTCCAGGCGCCCTTCTCCATGCGCATCACCAA
CGAGTCCGGCAAGACGCTGGTGGCCGACAAGGTCATCCCGGCCAACTGGGCGCCCAGCACCTTCTACCGCTCCATCGTCC
AGTACAGCTGAAGCTGCTGAACTGAACCGAACTCATCATTTGGAATCAT-GCATGCATTGGCTTGATTTGGTATCTGTAC
TATCATGGATCGTTTTGCATGG----GTACTACCGAGGAGGTTTTTGATTAA--TTAAGGTTGGGTCG----TCGGGTGT
CATGTAGGCGTCGTCGTGCATGTGTGTCTTGAATACGTCGGTGGGATATGGAGGAGGGGCACTTTTGCATGTGCACTCCC
GCGCCCACTGTCACTGTACCAGTGTGTAAGCAGACCATAAGTTATTACTGTTTGTGTGTACTCCTGCTTAACTCTTGTCC
CTCCTTCAGTCTCTCATCAGTACTGCCAGTACTCAACAGTTCGTATTGCCCTAGTACTTGTCAAACTTGATTGTGCGCGC
CAAGGATTAATTGCACGCCAGGAATTCGATCCTGACTTTCTAACGAACGTACGGCCACGGCAAGTGGAAATTCTACTCCG
TTCCGGTAGATTCGACGATCCT-GGAAAGGTCGGTACGTCATAATTTTTGCAACGACCAAGCAAAGCACGCAGTCGAGTA
TGTCTGCGTCATATCAGTTACCACCGACTAGCTAGTGCGTCTATCCAACGCAAAGGGTGCCAATCTCCCGGCACATGTCT
TTCACTTTCAAAAGCTCCTTTTCTTTCCGTATGGTAACCACTAACCAATTCGTTCGTTCTATAACCGTCAGTCTTAGCTA
C--CTAATGATAGTGAATGATTCGGATTAACTTTTACACGAGCGACT-GCCGGCAACATCGCCGCCTAAAAGTTCACTCT
AG--------------------CTAAGAAAGTTGTTTAACGACTAGCATGCATGCTAGTAGAGACCGCTGGATCGTCGCC
GTAAATACTGGCGCTAAACTCTCCCAATCGCCGAGCTAGTCTTTGGTCATGTT---------------------------
-------------------------------------------------------------------------
>chr1A_9
--------TATCAGGTAGCAGCATCATTGTGCTCGTGAATGAAATCGCAAGTGCCCTTATTTTTTTTTCCCTAACGAATC
CGCAGCGCGTTAATTAGGTACCTCTACGCAACTTCGTCCTACATGATTCGGTGGTT----------GCCTGTTAAACAGG
TTGGTTCCGATGATTGATTCCAACAAGAGTCAGTCAGGCCAACGTCCACGCTTTAATTGTAACGCAAACATTGCTGTTCC
TGCTGTTCCCGCCCGAATCTCTCGTTCCTAACGCGGCATCGTCGCCAAAGGCAGCACTTAGCTGTACGTTCCTGAAAGAG
AATACGATTTTCCAGAGTA---CTG------TGCGTATCTCTTTCTAGCAGAAATGGAACACAGCTCAGAGCATCAGCCT
GAGCAGGGCAGGTAGGGGTGCAAGCTGACGGCGTCCCCATGTCCACGACCGTCGTCGAAGC-AAAAATTACACGACGGGG
TCGGCATGTCCACGACTGTCCGTGAACAGAAATATGCAGATGATGT------------CTAAGGGCGAGTTTTGCTACAT
CTACGGAAAATAGTCTTA--------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AACTTATGTAGTACTCCCTCCGTTCCAAAATAGATGATCCAACTTTGTACTAACTT
TATACTAACGCTAGTACAAAGTTGAATCATCTATTTTGGAACGGAGGGAGTACAGTACAAGCTTACATGG----------
-----------------TCAGGCCTATCCGTGAAATTCAAGGGGAAGGTGATTAGTTTATACAAAGAAAAGTTACGTAAC
ATCATG--TAAGAGGTTACATAGGTGTATCATTTTTGCTCAAGGGCAGGTCCGCACTACGCAGTGTGGACAGAAACATGC
AATGTGTAACT------GCCGAGCCGTGATTTCTCGCAGGATTTGCTCCGGTAGCCATGTGACCCCTACACAAAGCACGT
CGTCGGGTGCAACAACCGTGGATGGCGATCGCGTCGCCCTGCACTGCGCCTGCCTATAAATACCCCGGCAATAT-GTTAC
TCCCAGAACATCAAAGCATACATAGCTCAGCCTCCCAGCCCGACCTGCT--CAGTGCGCTGGTACACTACCCCCACAAGC
TCGAAGAAGCGGTGGTGCTTTGACATGGCTCCTCTTTCGTCCAAGGCCGTTGCACTCGTTGCACTGTCCTCCCTCCTCGT
CACCTACGCCTCTGCCGGCGCCGGGAACTTCAACGACTCCGCCTTCACCGCCGACCCCAACTGGGAGGACGCCAGGGCCA
CCTGGTACGGCGCGCCCACCGGCGCCGGCCCCGACGACGACGGTACGTCCGTATGCGCCGGCCGGTGCA-TGCATGGCGC
CGCGGCCTTCGC------TTAACTGATCGTTTGTGTAATAACATGCGGTGATCGATGTGCATTCAGGCGGTGCGTGCGGG
TTCAAGAACACCAACCAGTACCCCTTCTCCTCCATGACATCCTGCGGCAACGAGCCCATCTTCAAGGACGGCAAGGGGTG
CGGCTCCTGCTACCAGGTAGCTACACTAGCTCGTT---------------------------------------------
CGTCATATTTTTGGTGGTTTGCCCCTGCCGTACGTGGTGGAAATGGAGCTGGTGACACAGTGCTAGTCTTGACTTGTGAT
CGTTTACTATCGCCTTTTCAGATACGGTGCACCAACGACCAGTCCTGCTCCGGCAACCCGGAGACGGTGGTCATCACCGA
CATGAACTACTACCCGGTTGCCAAGTACCACTTCGACCTGAGCGGCACCGCGTTCGGCGCCATGGCCAAGCCCGGCCTCA
GCGAGAAGCTCCGCCACTCGGGCATCATCGACATCCAGTTCAAGAGGTCGGTGGCATGCATTTCATCACTCGTTGCACGA
ATCCTATCTGGCCCTACCTGAACGATGAACAGTCTCATACTCTATATAACCAGTGCTTTTGTTGCCCAACAAAACTTTCA
CGACGGCGACCGGTTTAACTGGGACCCAAATAGATTCGCAGCGAATAATACTACTCTATTTTGAGTACCGTCGCCTCACA
CTTATTTGCCGTCGTCCCGGCTCGGTTACGAAGTAAGCTACAATGGCACATGGGTTGCTGATTGCTGCTGATGATGATTG
ATGCAGAGTGCCGTGCGAGTTCCCCGGTCTCAAGGTGACCTTCCACGTGGAGCAGGGGTCGAACCCGGTGTACTTCGCGG
TGCTGGTGGAGTACGAGGACGGCGACGGCGACGTGGTGCAGGTGGACCTCATGGAGGCCAACTCCGGGACGTGGACGCCG
ATGCGCGAGTCGTGGGGATCCATCTGGCGGCTGGACTCCGGCCACCGCCTCCAGGCGCCCTTCTCCATGCGCATCACCAA
CGAGTCCGGCAAGACGCTGGTGGCCGACAAGGTCATCCCGGCCAACTGGGCGCCCAGCACCTTCTACCGCTCCATCGTCC
AGTACAGCTGAAGCTGCT---------------CATCATCTGGAATCATGGCATGCATTGGCTTGATTTGGTATCTGTAC
TATCATGGATCGTTTTGCATGGGTACGTACTACCGAGGAGGTTTTTGATTAAGGTTAAGGTTGGGTCGTCGATCGGGTGT
CATGTAGGCGTCGTCGTGCATGTGTGTGTCGAATACGTCGGTGGGATATGGAGGAGGGGCACTTTTGCATGTGCACTCCC
GCGCCCACTGTCACTGTACCAGTGTGTAAGCAGACCATAAGTTATTACTGTTTGTGTGCACTCCTGCTTAACTCTTGTCC
CTCCTTCAGTCTCTCATCAGTACTGCCGGTACTCATCTCTTCGTATTGCCCTAGTACTTGTCAAACTTGATTATGC----
--------------ACGCCAGGAATTCGATCCTAACTTTCTAACCAACGTACGGGCACGGCCAGTGGAAATTCTACTCCG
TTCCGGTAGATTCGACGATCTT-GGAGAGGTCGGTACGTCATAATTTTTGAAACGACCAGAGAAAGCACGCAGTCGAGTA
TGTCTGCGTCATATCAGTTACCACCGACTAGCTAGTGCGTCTATCGAACGCAAAGGGCGCCAATCACCCGGCACATGTCT
TTCACTTTCGAAAGCTCCTTTTCTTTCCGTATGGTAACCACTAACCAATTCGTTCGTTCTGTAACCGTCAGTCTTATGGC
TTGCTAATGATAGTGAATGATTTGTAGTAACTTTTACACGAGAGACG-GCCGGCAACATCGCCGCCTAAAAGTTCACTCT
------------CTTCCCTTTCCTAAGAAAGTTGTTTAAC---TGGCATGCATGCTACTAGAGACCGCTGGATCGTCGCC
GTAAATACTGGCGCTAACCCCTCCCAATCGCCGAGCTAGTCTTTGGTCATGTTGTCCACTTAAACTACTCCTAAATAACC
TGAATCTGCTG------AATGTAAGACTTTTCGGCTGTTACCGACAGGATCAAGCTAGCTCCGGTAGAAG---
>SNPs
SSSSSSSS------------------------------------------------------------------------
------------------------------------------S-------------SSSSSSSSSS--------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------SSS----------------------------------------------S---------S-
-----------------------------------------------------S--S-S--S----------S---S---
--------------------------------------------------------------------------------
-----S----S-------SS------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------------------------------SSS------------
--SS---------SS----S-----------S-------------------S----------------------S-----
-----SSS-----------S-S----------------------------------------------------------
-----------SSSSSS-----------------------------------------------S---------------
--------------------------------------------------------------------------S-----
--------------------------------SS-----------S----------------------------------
------------S--------S----------------------------------------------------------
------------------------------------S-------------------------------------------
----------------------S---------------------------------------------------------
---------S------------------------------------S--S------------------------------
-----S-----------------------------------------------------------------------S--
-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--S-------------------------S--------------------------S------S-----------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------S-----------------------------
----SS--------------------------------------------------------------------------
--------------------------------------S---------------------------S-------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------S--S-----------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------S-----
--S------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------------------------------S--S------
----S------------------------------------------------------S--------------------
---S-------SS------S------S-S-------------------------------------------------S-
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-------------------------------------------SSS-S--------------------------------
-SSSSSSSSSSS--------------------------------------------------------------------
------------------------S----------------------------------------------S--SSS-SS
SSSS--SSS-SSSSSSS-----------------------S-----S-S-----SSS-S----S------SSS
>forward_139
--------------------------------------------------------------------------------
---------------------------------------TACGTGATTCGGTGGTTGCA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2166
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----ACGACCGGTTTAACTGGGAC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_1293
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CACAAGC
TCGAAGAAGCAGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2279
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AACAATGGCACATGGGTTGC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_1823
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGGAGCTGGTGAAACAGTGT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2951
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TCTGTTGTCC
CTCCCTCAGT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
