>input_sequence_54529
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-------------------------------------------------ATGGGGGTGCCGCTGCCGAAGTCGAAGTGGC
GGCCGTGGGCTGAACTCCCCGAGAGGTACCTCAGCGACATCATCCGCAACCTCCCGTGCATCCTCGACCACGCCCGCTTC
TCCAGCGTCTGCACTAGGTGGCGCGAGACGGCGCGGACGAACCCGCCGAGGTTCCCGTTCCCGTGGCTGATGATGCCATC
CACCGCCGCGACCTCCTTCTTCTGCGTCGCCTGCAGAGCGACCCACCACCGCCCCAGGCTCCCCGCGGACGCCCGCGGCG
CGCGCTTCTGCGGCTCTTTCCCGGGCGGCTGGCTCGTCGCCGAGCTCCCGTGGCCGCGCGGCCACTACGCCTTGCTCAAC
CTCCTCACCGGCGCGCGCGTCCCCCTCCCGAGGCTCCTCGCCGTCCCCTGCCACGGTGGCGGCAAGATGTGCCCCGTCGT
TCTCCACGCCGTCACCCTCTCCGCCGCGCCGTCCGTCGAGCCCGGCCCCGGCGAGCCCTACTACGCCGCCGCCATAGTGG
CTGGCCAGTCCAATATCGCTTTCTGGTGCCCGCGCGCCGGGAACTGCTGGTTTCCGCCGATCTTCTCGTCGGACGCCAGC
GACGAATCGTGGCACGATTTCTTACCCAAGAACAGGATCGAGGACGTGATATACTTCTCCGGCAACGGCAAGTACTTCGT
GGGCTTCTACGTCCTCACCGACAAGGAGGACCTCCTGATGTTCCGGCCGGAGCCCGACGGCGACGGGGCGCAGCTCTCCA
CGTTCACGGTGCGCTACAGCTTCCCCGGCCACTGCGCGGCCGAGCCGGCGCCGGGGCAGACGGTCTCCCGCTACCTCGTC
GTGTCCCGCGGGGAGCTGCTGATGATCGTGAGGTTCGCCGGCCCCGAGGAGCGCACGAGGTTCGACGTGTTCGTGCTGGA
GGAGAAGGAGATCATCAGGGGAGCGGACCACAACGGCCCGCCTCGAGTCTTGGCTTCTTGGAGACGGTGCTGCAGCGCGG
CGACCCTCAGCGGCCGGAGGATCTTCCTCGGGCGGGGCTGCTCCGTGGCCGTCGACGTGGGGTACCCCTTCCCGCTCTAC
ATCTACTTCCTGGACGACGGCAGGAGGTCCCACGGCGCCCTCCCGACGGCCGGGTACCCGCCGTACCCCTGCAGCGAGAC
CGGCGGGTTCTGGTTCTTCAACAAGGGCATCGTGCGTTCCCTCCCGCGAGAGCCTCCGTCGGACTGCTCGCCGTGGATTT
GGTTCTTCCTGTCCGACGCGACATTCCGGGCCGGCGTGCCTCCGCCTGCATCTCTGGCTTGCGGCTGGGGGGTTGACACT
GACAGTGAGTAG--------------------------------------------------------------------
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>chr6B_1_TraesCS6B01G194800
AACCTTGGTCGGGGTCACCAAGAGGGTATTTTGGGTTGGCTTGGGAGCCTTATGTTGGGCTCTATGGACCATTAGAAATA
AATTTACTATTGAGCTTACCTTCCCATCTAAGCCTGCTGATGTTCTTTTCAAAACATGTATATTCTTGCAGCAGCGGAGA
TCATTGACTAAGGAGCCTGATCGGGACGCCCTGGACCTGCTCATCGACAAAATTCGGGCTTCGGCTTCTCAGATCTCCGG
GACGAATCCTGTCGTATAAATCTGGTGCTGTAGTTTGCGGAGATTAGGTCCTTCTCCTTCCCCGGCCTACGCGCTGTGTT
TGGCAGTTGCCTGTATCGTACTTGCTTTAGTTTCTCTTAAACTTCTCTGTGTGGCTCTGTTATCCTGTGAACCTGTGGTA
TCCATGACGCTGCCTTGTGGCTTTATCTATAAAGTCGGGCCTTGGCCTTTTCTCTAAAAAAGTCTCTGCGCGTTTTGCTA
ACAGATAGGTGCGGAATGCTAAGAGATATGTGCGGAATTTTGTTTGACCCACGTTCTGCTAAGAGATTGGTGCGGAATTA
TTTTTTTGATCATTTCAGGTGGATGGTTTTGACCTCGCCAGCTCCAACGCTGGGGTGTTCTAGGTAATCAAATGAGTTCT
GCTGCGAGATCGGTGTGGAATTTTTTTGATGGGTGAAAGGTTAACGGTATTGGATTGTTAGTGTTGCAAGGTACTTTAAC
CATGTTGCAAAAGTGGATGTGTTTAGTAGAAATGTGCTTTTGCATTGTTGTATGCATCTGTTGTTGCATATA--GGTTCG
TCCCTATGTAGCATATGTTATGAAAATCTATTCTGAAAGATTGGGATTTGCAGCATATGCAATTTTTTCTATAAATATCT
CGATGTTTTGCACCAACCTTTCAGAGTTCGCATCTCAACGATAAACTTTCACTTCGTCTCTCTCCCTCGGTCCCTCCCCA
-------CCCCACCAAGAAGTTTCAAGAAACTCAAGAACCTCTCCTCCCATGGGGGTGCCGCTGCCGAAGTCGAAGTGGC
GGCCGTGGGCTGAACTCCCCGAGAGGTACCTCAGCGACATCATCCGCAACCTCCCGTGCATCCTCGACCACGCCCGCTTC
TCCAGCGTCTGCACTAGGTGGCGCGAGACGGCGCGGACGAACCCGCCGAGGTTCCCGTTCCCGTGGCTGATGATGCCATC
CACCGCCGCGACCTCCTTCTTCTGCGTCGCCTGCAGAGCGACCCACCACCGCCCCAGGCTCCCCGCGGACGCCCGCGGCG
CGCGCTTCTGCGGCTCTTTCCCGGGCGGCTGGCTCGTCGCCGAGCTCCCGTGGCCGCGCGGCCACTACGCCTTGCTCAAC
CTCCTCACCGGCGCGCGCGTCCCCCTCCCGAGGCTCCTCGCCGTCCCCTGCCACGGTGGCGGCAAGATGTGCCCCGTCGT
TCTCCACGCCGTCACCCTCTCCGCCGCGCCGTCCGTCGAGCCCGGCCCCGGCGAGCCCTACTACGCCGCCGCCATAGTGG
CTGGCCAGTCCAATATCGCTTTCTGGTGCCCGCGCGCCGGGAACTGCTGGTTTCCGCCGATCTTCTCGTCGGACGCCAGC
GACGAATCGTGGCACGATTTCTTACCCAAGAACAGGATCGAGGACGTGATATACTTCTCCGGCAACGGCAAGTACTTCGT
GGGCTTCTACGTCCTCACCGACAAGGAGGACCTCCTGATGTTCCGGCCGGAGCCCGACGGCGACGGGGCGCAGCTCTCCA
CGTTCACGGTGCGCTACAGCTTCCCCGGCCACTGCGCGGCCGAGCCGGCGCCGGGGCAGACGGTCTCCCGCTACCTCGTC
GTGTCCCGCGGGGAGCTGCTGATGATCGTGAGGTTCGCCGGCCCCGAGGAGCGCACGAGGTTCGACGTGTTCGTGCTGGA
GGAGAAGGAGATCATCAGGGGAGCGGACCACAACGGCCCGCCTCGAGTCTTGGCTTCTTGGAGACGGTGCTGCAGCGCGG
CGACCCTCAGCGGCCGGAGGATCTTCCTCGGGCGGGGCTGCTCCGTGGCCGTCGACGTGGGGTACCCCTTCCCGCTCTAC
ATCTACTTCCTGGACGACGGCAGGAGGTCCCACGGCGCCCTCCCGACGGCCGGGTACCCGCCGTACCCCTGCAGCGAGAC
CGGCGGGTTCTGGTTCTTCAACAAGGGCATCGTGCGTTCCCTCCCGCGAGAGCCTCCGTCGGACTGCTCGCCGTGGATTT
GGTTCTTCCTGTCCGACGCGACATTCCGGGCCGGCGTGCCTCCGCCTGCATCTCTGGCTTGCGGCTGGGGGGTTGACACT
GACAGTGAGTAGTGACGGCACATTATCTGCAGCAGGACAGAATTCGAACTACGTACATGTAAATCTACTGTCCCGTCAGT
TCTTCATCCCTGCTTTGGTAAGGTCTCAAATGTT-TGATTTGATTCTTCATACTCGCCGTGGATTTGCTTCATTGTGATC
ATACTGTTCCGTGAGTTTATCATCATAAGAGGTGCATGAACAAACGATTGTTTGCGGTTCAGCTAATGGTGGTGTGCAAC
TGACCTGAAACAAGTTCCTGAATAGTTCAGTGCTCTCTGTTAATATTTGGAGTTCAGAGATGTTCCTAACGC--------
---------------------------------------------------AGCTCATATATTATCTTGAATCTTGCGAG
TGTGTGTAATACTGTGGTGATGGCATGAATGAATACATGAAACCAGCCTCAGTGCCATCATATCCTTTCCATTGGCACAG
TTTGGATCTTTTTTTGCTGTAGACTCTGCTGCAAGTGCAATGGAGGGTGCGACTGAATCCTTGATTCAGCTAAATCTACA
CTACATAACCATTGGGTGGATCCTCCTACTGAGGAGTAGGCTCAGGCTGCTTCCTGTAGCTGTAGGTCGTTTGCTGCCCA
TAAACAATGCACTTGCTGAAAATACATTGTAACCACAGAGTATATCTCTGCATATATTGTACTCCCTCCGTTCCTAAACA
TAAGTCTTTGAAAAGATTTTACTATGGACCACATAAGGAGCAAAACGAGTGAATCTACACTTAAAATGCATATATATACA
TCTGTATGTGGTCCATAGTGAAATCTCTACAAAGACTTATACTCCCTCCGTTCCTAAATGTAAGTCTTTGTAGAGATTCC
ACTAGGTGGACTACATACGGAGCAAAATGAATGAATCAACACTTAAAATGCATCTATATACATCCGTATGTAGTTCATAG
TGGAATCTCTACAAAGACTTATATTTAGGAACGGAGGGAGTATGTCAACTGGGAAATGAAGTAGAATGTCAGCGGTTGCT
GCCATTCTGCGGCACCCCGGCTTTGAAGCCTC
>chr6D_573
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------------TTTGAGGTGGATGGTTTTGACCTCGCCAGCTCCACGCTGGTGGTGTTCTAGGTAATCAAAGGAGTTCT
GCTGCGAGATCGGTGTGGAAATTTTTTGATGGGTGAATGGTTAGCGGTATTGGATTGTTGGTGTTGCAAGGTACTTTAAC
CATGTTGCAAAAGTGGT---------------TGTGTTTTTGCATTGTTGTATGCATCTTTTGTTGCATATATAGGTTCG
TCCCTATGTTGCATATTTTGTGAAAATCTATTCTGAACGATTGGGATTTGCAGCATATGCAATTTTTTCTATAAATATCT
CGATGTTTTGCACCAACCC-----AGTTCGCATCTCAACGATAAACTTTCACTTCGCCTCTCTCCCTCGGTCCCTCCCAA
GTCCCATCCCCACCAAGAAGTTTCAAGAAACTCAAGAACCTCTCCTCCCATGGGGGTGCCGCTGCCGGAGTCGAGGTGGC
GGCCGTGGGCTGAACTCCCCGAGAGGTACCTCAGCGACATCATCCGCAACCTCCCGTGCATCCTCGACCACGCCCGCTTC
TCCGGCGTCTGCACTAGGTGGCGCGAGACGGCGCGGCCGAACCCGCCGAGGTTCCCGTTCCCGTGGCTGATGATGCCATC
CACCGCCGCGACCTCCTTCTTCTGCGTCGCCTGCGGAGCGACCCACCACCGCCCCAGGCTCCCCGCGGACGCCCGCGGCG
CGCGCTTCTGCGGCTCTTTCCCGGGCGGCTGGCTCGTCGCCGAGCTCCCGTGGCCGCACGGCCACTACGCGTTGCTCAAC
CTCCTCACCGGCGCGCGCGTCCCCCTCCCGAGGCTCCTCGCCGTCCCTTGCCACGGTGGCGGCAAGATGTGCCCCGTCGT
TCTCCACGCCGTCACCCTCTCCGCCGCGCCGTCCGTCGAGCCCGGCCCCGGCGAGCCCTACTACGCCGCCGCCATAGTGG
CTGGCCAGTCCAACATCGCGTTCTGGTGCCCGCGCGCCGGGAACTGCTGGTTTCCGCCGATCTTCTCGTCGGACGCCAGC
GACGAATCGTGGCACGATTTCTTGCCCAAGGACAGGATCGAGGACGTGATATACTTCTCCGGCAA------GTACTTCGT
GGGCTTCTACGTCCTCACCAACGAGGAGGACCTCCTGATGTTCCGGCCGAAGCCCGACGGCGACGGAGCGCAGCTCTCCA
CGTTCACGGTGCGCTACAGCTTCCCCGGCCACCGCGCGGCCGAGCCGGCGCCGGGGCAGACGGTCTCCCGCTACCTCGTC
GTGTCCCGCGGAGAGCTGCTGATGATCGTGAGGTTCGCCGGCCCCGAGGAGCGCACGAGGTTCGACGTGCTCGTGCTGGA
GGAGAAGAAGATCGTCGGGGGAGCGGACCACAACGACCCGCCCCGAGTCTTGGCTTCTTGGAGACGGTGCTGCAGCGCGG
CGACCCTCAGCGGCCGGAGGATCTTCCTCGGGCGGTGCTGCTCCGTGGCCGTCGACGTGGGGTACCCCTTCCCGCTCTAC
ATCTACTTCCTGGACGACGGCAGGAGGTCCCACGGCGCCCTCCCGACGGCCGGGAGCCCGCCGTACCCCTGCAGCGAGAC
CGGCGGGTTCTGGTTCTTCAACAAGGGCATCGTGCGCTGCCTCCCGCGAGAGCCTCCGTCGGACTGCTCGCCGTGGATTT
GGTTCTACCTGTCCGACGAGACATTCCGGGCCGGCGTGCCTCCGCCTGCAACTCCGGCTTGCGGCTGGGGGGTCGACACT
GACAGTGAGTAGTGACGGCACATTATCTGCAGCAGGACAGAATTCGAACTACGTACATGTAAATCTACTGTCCCGTCAGT
TCTTCATCCCTGCTTTGGTAAGGTCTCAAATGTTTTGATTTGATTCTTCATCCTCGCCGAGGATTTGCTTCATTGTTCT-
-------------------TCATCATAAGAGATGCATGAACAAACGATTGTTTGCAGTTCAGCTAATGGTGGTGTGTA--
----CTGAAACAAGGTCCTGAATAGTTCAGTGCTCTCTGTTAATATTTGAAGTTCAGATATGTTCCTGAGGCAGCAAGAT
TGAATGATGAATCTTTGGTAATGTCCCATTGATTGATACCTATCTCTTGTGAGCTCATATATTATCTTGAATCTTGCGAG
TGTGTGTAATACTGTGGTGATGGCATGAATGAATATATGAAACCAGCCTCAGTGCCATCATATCCTTTCCATTGGCGCAG
TTTGGATCTTTTTTTGCTGTAGACTGTGGTACAAGTGCAATGGAGGGTGTGACTGAATCCTTGATTCAGCTAAATCTACA
C-ACATAACCGTTGGGTGGATCCTCCTACTGAGGAGTAGGCTCAGGCTGCTTCCTGTAGCTGTAGTTCGTTTGCTGCACA
TAAACAATGCACTTGCTGAAAATACAGTGTAACCATAGAGTAGATCTCTGCATATATT----------------------
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---------------------------------------GTATGTCAACTGGGAAATGAAGTAGAATATCAGCGATTGCT
GCCATTCTGCGGCACCCCAGCTTTGAAGCCTC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS---S------------------------------SSSSS-S-------------------S-------
--------------------S----------------S-----S---------------S--------------------
----------------SSSSSSSSSSSSSSSS----S----------------------S--------------------
---------S------S--S-----------------S------------------------------------------
------------------SSSSSS--------------------------------S---------------------S-
-------------------------------------------------------------------S------S-----
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---S--------------------------------S-------------------------------------------
----------------------------------S---------------------------------------------
---------------------------------------------------------S------------S---------
-----------------------------------------------S--------------------------------
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-------------S-----S------------------------------------------------------------
-----------------------S------S----------------------------------SSSSSS---------
-------------------S--S--------------------------S----------------S-------------
--------------------------------S-----------------------------------------------
-----------S---------------------------------------------------------S----------
-------S-----S--S------------------S------S-------------------------------------
-----------------------------------S--------------------------------------------
------------------------------------------------------SS------------------------
------------------------------------S-S-----------------------------------------
------S-----------S-------------------------------S---S------------------S------
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---------------------------------------------------S-------S----------------SS-S
SSSSSSSSSSSSSSSSSSS------------S-----------------------S--------------------S-SS
SSSS----------S----------------------------------S--------S--------S-S----------
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-----------------------------------S----------------------------------------S---
-------------------------S--S-S------------------S------------------------------
-S--------S------------------------------------------------------S-----------S--
--------------------------S--------S------S---------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S------S-----
------------------S-------------
>forward_304
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--------------------------------------------TAGGTCCTTCTCCTTCCCCG----------------
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>reverse_1852
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-----------GGAGCTGCTGATGATCGTGA-------------------------------------------------
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>forward_540
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----------------------------------------TGTTTGACCCACGTTCTGCT--------------------
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>reverse_1910
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---------------------------------------------------------------------TTCGTGCTGGA
GGAGAAGGA-----------------------------------------------------------------------
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>forward_1540
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CTGGCCAGTCCAATATCGCT------------------------------------------------------------
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>reverse_2756
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-----------------------------------CATGAAACCAGCCTCAGTGC-------------------------
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