>input_sequence_54512
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATGAA
GGTAATCTGATCGATCGACGATGCCATGGATCTATGCATCT--------------------CTTCCCGCTTTTTGGTTCT
CTTCTGAACATGTTGCTCATGTTTTTATATACCATGCAGAAGGTGCGGGCGAGGCCGCGGCGGATCCCGGCGTTCGGGGA
GTGGAACTACTACGACGACGGTGGGTACGGGTACGGCGACGGCGACGGCGCCGGGGACTGGCCGGTC------ACCCAGT
GCTTGGACTCCGCCATGCAGGCCGGCCTGTTCGTCTCACTGCCGACTTCACCGAAGCCACTCAAAAAGGTGAGTACGTAC
TGCATGGACTCGTCATCCTTTTCGAAAAAACGCATGGATTCTTCATGAGCAAGCACA----------------------C
GGATTCTTGCCTTAT-GAGTTGTGTTACTGATTTTGTAAACAACAGAGGAGTCCTTCTGATTGCATCACACAGTCACATA
GATTACTACTAAATGAGTGTTGTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTACACGTATAG
AACGAGCTACTTTTTG-------GAAAAGTTCGGAGCATTGTAGAAATGAAGAAACGCAAACGTTTGCGGCAGCCGCC--
---CTAGCAAAAGGACTAGCAAAACACATGGAGTAGTACGAAATACAGTCA-------TGACGTCCAGGAATAAGCCTTT
CACTCTCCCGGTGTCGAAGTAAAAAAATGCCATTGTCCTAA--AAAGACAGCGAGCCCTATAGCTATACAGCTGCTCGCA
GTGGAAATGCTGTTACTTTTTGCTGTAACCTCTGTGCTCACTATTACTAGGTGGTGAAGTGGAGCGACAGCGGCACGCTG
GAGGTGGACGGGGAGCAGAGGCAGA------------AGGTGGTGGTGGGGCTGCGCGAAGAGCACGGGCCGAAGAA---
GGAGGGGAGGGGGAAGCCCATAGAAATTTACCTGAAGGTCCCTCACGCCGCCGACGGCCACCTGAGCACCACCGCAGGCT
ACAACAAAGGTCA---CAGGGTGCGGGCGGTCAAGGCCGTGGACGAGGACCTCTACGTGATCCCGCCGGACATGCTCTGC
CACAATAATAACCCACGCGTAAGTGTCTGACCCATGGGGCCCCGACGAAACCTGAAGGATTTGT----CGTGTTTACTGC
TT--AATTATGGTCTTATCTTACCAACAGAGGAATCATGCACTCCACTACTCGTTCACTGTTAAGCTATGGTCTTATCTT
ATACCGTACTGACGATTGTTTATTTGGTTCCTGCGGCTGC---AGAAGCGGCTGACACGAGTGTTAGTAGTGCTGTTTAA
TTAGGGGTCTTATCTTACTGACGGGTGT-TTTATTCCTGCGTGCAGAAGAGGCTGACGAAAAGGCTGTGGATCGGGTGCC
TGGGCTGCGTCTCCGCCTAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr4B_1_TraesCS4B01G335400
CAGACGGTGAACAAGTATTTGATAGATGGTGAACATATTTTCAATAGACAATGAACGATTTATTTAATATGTGATGAACA
TTTTCTTAGTACGTAGTGAACATTCCGTTCTAAATTATCTAGTTTAATACGCGATTAATGTATCAAAAAGTTTGTTGTGT
ATTTTAGTAAGATGTGATTTTTTTCAAAAGATGCATGCATTTTGTTAATATATATTTTCAGAAATACATGATAAAAAATT
TCTACTACATGTTGAAGCTTTTAAATAGACGTCGAACTGTTTTTTTTAATATAGGATGAACATTTTATCAATACATGATG
AACATTCTTTTTAGTCATGAACACTATTTTGAATTACATGAAGAATTTTTAAATACACGGTGAACAACTTTGTAATATAC
TATTTGTTTTTGTAAAATACGATTTGAACATTTTTAGGACATTAGTAAATTAGCTTTTCATGCATCTCTCATTTAAAAGG
AAATAGGTTCTTGTATATCTCTCATTTAAAAGAAAAAAAATGAAGGCAGAGAAAAACTTGAGAAGA-AAAATGAAGGCAG
CGAAAAAAAAGAGAGAGGAAAAAAGCGAACGGAACGAAGCTGGGCGTAGGCGCTGCGGTGAGCACGTACGCGGCAGTCAG
CCACAGTGCGGCCAGTCCTTGTGAGTGACGCGCCCGCATCTTGCGCTGTTTGACCCGTACGTACGAGTGCTTCCACAGCC
ACAGCGCCGTCAGAGGCGGCCCCACCCACCATTGGCCGGTCA-CTCCACCTCCACTGCACCTGCTCTG------------
---TTTTTGCGT-----AGCCA--CCACCTACTCCCGTTGGAGCGCAAAACAAAAACATTCCCTCCCACCTCTCCCTGCT
CCTCCCG--CTCGCTCTATAAATATTGCACG------TTCTGCTCTGCTCCTAGCTACCATTAC---TGGTAGCACCATA
GCACCTCCTCAGCTTGAAGGCCGCAAGCAGAGCAGAGCAGAGCTCACTCCGTCCGTCACTGACCGCTCCGCTGCGATGAA
GGTAATCTGATCGATCGACGATGCCATGGATCTATGCATCT--------------------CTTCCCGCTTTTTGGTTCT
CTTCTGAACATGTTGCTCATGTTTTTATATACCATGCAGAAGGTGCGGGCGAGGCCGCGGCGGATCCCGGCGTTCGGGGA
GTGGAACTACTACGACGACGGTGGGTACGGGTACGGCGACGGCGACGGCGCCGGGGACTGGCCGGTC------ACCCAGT
GCTTGGACTCCGCCATGCAGGCCGGCCTGTTCGTCTCACTGCCGACTTCACCGAAGCCACTCAAAAAGGTGAGTACGTAC
TGCATGGACTCGTCATCCTTTTCGAAAAAACGCATGGATTCTTCATGAGCAAGCACA----------------------C
GGATTCTTGCCTTAT-GAGTTGTGTTACTGATTTTGTAAACAACAGAGGAGTCCTTCTGATTGCATCACACAGTCACATA
GATTACTACTAAATGAGTGTTGTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTACACGTATAG
AACGAGCTACTTTTTG-------GAAAAGTTCGGAGCATTGTAGAAATGAAGAAACGCAAACGTTTGCGGCAGCCGCC--
---CTAGCAAAAGGACTAGCAAAACACATGGAGTAGTACGAAATACAGTCA-------TGACGTCCAGGAATAAGCCTTT
CACTCTCCCGGTGTCGAAGTAAAAAAATGCCATTGTCCTAA--AAAGACAGCGAGCCCTATAGCTATACAGCTGCTCGCA
GTGGAAATGCTGTTACTTTTTGCTGTAACCTCTGTGCTCACTATTACTAGGTGGTGAAGTGGAGCGACAGCGGCACGCTG
GAGGTGGACGGGGAGCAGAGGCAGA------------AGGTGGTGGTGGGGCTGCGCGAAGAGCACGGGCCGAAGAA---
GGAGGGGAGGGGGAAGCCCATAGAAATTTACCTGAAGGTCCCTCACGCCGCCGACGGCCACCTGAGCACCACCGCAGGCT
ACAACAAAGGTCA---CAGGGTGCGGGCGGTCAAGGCCGTGGACGAGGACCTCTACGTGATCCCGCCGGACATGCTCTGC
CACAATAATAACCCACGCGTAAGTGTCTGACCCATGGGGCCCCGACGAAACCTGAAGGATTTGT----CGTGTTTACTGC
TT--AATTATGGTCTTATCTTACCAACAGAGGAATCATGCACTCCACTACTCGTTCACTGTTAAGCTATGGTCTTATCTT
ATACCGTACTGACGATTGTTTATTTGGTTCCTGCGGCTGC---AGAAGCGGCTGACACGAGTGTTAGTAGTGCTGTTTAA
TTAGGGGTCTTATCTTACTGACGGGTGT-TTTATTCCTGCGTGCAGAAGAGGCTGACGAAAAGGCTGTGGATCGGGTGCC
TGGGCTGCGTCTCCGCCTAGGGATCGTAAACCATCTGGCCTTGGCGTGCGTGCGTG----TTGTAAAGAGAGGGAGAAAG
A--AAGAGGAGCGGAAACCCATGGGCC----ATGATGCTGTCACGCCATGTCAAACATCCTCTCTCTCTCTA--------
----CTATAGTCCTAGTATTATGCGTTTTACTATAGGATGGATGGATGGATGGATGGAC-GGCTTGATGGACGGAGACGG
AGACGGAGACGGAGACGGCGACGTGATGCGCGGCACGCGGCAGGCAGGCAGCGTCATTTCCCCGTGCCAAACGCCCACTC
GAGTGCTGCTTTCTCCTTCCACCGTTGCGTGCATCTTTCCCGATGGGCTTT--GCTACTCGATGTGTCCATGTAGTTGG-
AGACTTGTTCTGTGCCTG---------------------------TCGAGCATGCATGAAAAGAAAATAACAAGGG----
AGGAGCCATGGCGGTGGTGTCTTGTTCTGCACGACTCCAACCGTATCTCTTTCAGTTAAATCCATTGCTCTTTCGATGTC
TCTTGTCATTGCTCTTTCCATGTGTT-----AGCTTACGAC-----------GTAGGGTGTGATTGCGCGCTGATTCTTT
CCGG-CCTCGCTGACTGATCACGCGATCGCCGCTTC-----ATGCAAACGCGTGCAGGGTTGTAGCCGGACGGCATCAAC
CTGTCCACGAGCGTTCGCAAAGTCAA-----AAGCATACACTAATACTCATTACTATATGAATTGTGCTAGTTCTAGTTA
TGCTTTTTGTGGACGCTCGTGTCCGCATGCATCCCTAAACGTGTGCATGCAACACAACAAGGTTGGAGATAACAACCTTC
ACACATTTTGCGTTTCAAGACCAAATATTTCTATCTATCAAAAAGTTCCAAAAACATGCATATAGATATTTGTTAATAAC
CTAC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TCTTAAGATAATACTATGACGACCCGCAGCGTGCATTAAAATAGAAAACTTAAACTGCAACACTCCTGACCAGTGG
CGGAGCCAGGATTTTCGACATGGGTATGCGAAGTTTTTTTTCTACACAACTATATAATAAGAGA
>chr5A_528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AGAGAAAGAATTGAGTGAACAAAATGAAGGCAG
CGAAAAAGAAGAAG--GGGAAGAAGCGAACGGGACGAAGCTGGGCGTACGCGCTGCGGTGAGCACGTACGCGGCAGTCAG
CCACAGT---------CCTGGTGAGTGACGCCCCTGCATCTTCACCTGTTTGACCCGTACGTACGGGTGCTCCCACAGAG
GCG--------------GCCCCTACCCACCATTGG-------------CCTCCACTGCACCTGCTCTGCTCTGCTCTGCT
CTGTTTTTGCGTAGCCAAGCCA--CCACCTACTCCCGTTGGAGCGCAAAACAAAAACATTCCCTCCCACCCCTCCCTGCT
CCTCCCGCTCTCGCTCTATAAATATA-------------CTGCTCTGCTCCTAGCTACTACCACTAGCGTTAGCACCGTA
GCACCACCTCAGCTTGAAGGTCGCAAGCAGAGCAGA--------CACTCCGCCCGTCGCTGACCGCACCGCTGCGATGAA
GGTAATCTGATCGATCGACGACGCCATTGATCTATGCATCTGTGGCAGCCTGTCTACATCTCTTCCCGCGTTTTGCTTCT
CTTATTAGCATGCCGCTCATGTGTT--TATACCATGCAGAAGGTGCGGGCGAGGCCGCGGCGGATCCCGGCGTTCGGCGA
GTGGAACTACTACGACGACGGCGGGTACGGGT------ACGGCGACGGCGCCGGCGACTGGCCGGCC------ACCCAGT
GCTTGGACTCCGCCAGGCAGGCCGGCCTGTTCGTCTCGTTGCCGGCTTCACCGAAGCCACTCAAGAAGGTGAGTAGTG--
-------------------------------------------------------CATGGAGTCTTGCTCGGCAAAAGCC
GGATTCTTGCCTTAACGAGTTTTGCTACTGATTTTGTAAACAACAGACGAGTCTTGCTGATTGCATCATAT----ACGTA
GATTACTACTACTCCCTCCCTTCCATAATATAGTGCCTATAGATTTTTTGAGAAGTCACACTTTACAAACTTTGACCAAG
TTTGTATAGAAAAAGACTTATATCTACAATTCCAAAAATATATAATGTGAAACTACATCTTATGATGAATCTAGTGATAT
ATGTTACGCACCACTGGCGGAGCTAGGCAAGATGCGTTGAGGGGGCCAAACAGGAAATAAGGGTGTTTGCAAGGGGCAGA
AGACAATATTTTTCTTAATTTAATCTTTCCTAAAAAATTCCCCACGTAGTTTTACCAAGGCTGGGGGGCCCACGGCACCT
GCAGGAACCAACGTAGCTCCGCCACTGTTACGCACTCTAGATGTAAATGTTTTTCTCCACAAACTTGGTCGAAGTTTATG
AGGTTTGACTTTTCAAAAAAATCTATAGGCACTACATTATGAAACGGAGGAAGTACTAAATGAGTATTGTACACGTTTAG
AACAAACTATTTTACTACTAGTAGAAAAGTTCGGAGCATCGTAGAAACGAAGAAACACCATCGTTTGCGGCAGCCACTCT
AGTCTAGCAAAAGGACCAGCAAAAACAT----GTAGTACGAAATACAGTCACGAGTCATGACGTCCAATAATAAGTTTTT
CACTGTCCCGGTGTCGCAGTAAAAATGTCGTTGTCCTGAAAAAAA----------------------ACAGATGGTCGCA
GTGAAAACGCTGTTACTTTTTGCTGTAACCTCTGTGCTCATTATCACTAGGTGGTAAAGTGGGGTGACAGCGGCACGCTG
GAGGTGGACGGGGAGCAGAGGCAGAGGCAGAGGCAGAAGGTGGTGGTGGGGCTGCGCGAAGAGCACGGGCCGAGGAAGCA
GCAGCA---GGGGAAGCCCATAGAAATTTACCTGAAAGTGTCTGACGCCGCCGACGCCCACCTCG------CCGCGAGCT
GCACCAAAACCCT---CAGGGCGAGGGTGGTCAAAGCCGTGGACGAGGACCTCTACGTGATCCCGCCGGAGATGCTCTGC
CACAACAA---CCCACGCGTAAGTCACCGACCCGTGGC-CCCCCACGAAACCTGGAGGACCTTT----CGTGTTTACTGC
TTAAAATTATGGTCTTATCTCACTGACAGAGGAATCATGTAGTCCACTACTCGTTCACTGTTTAGCTACAGTCTTATCTT
A-------CTGACGAGTGTTTA-TTGGCTCCTACGGCTGCAGTAGAAGAGGCTGACACAAGTGTTTAATGA---------
----GGGTCTTA-----CTGACGGGTGTGTTTATTCCTTGGTGCAGAAGAGGCTGACGAAAAGGCTGTGGATCGGGTGTC
TCGGCTGCGTCTCCGCCTAGGGATCACAAACCATCCGGCCTTGGTGTGCGTGCGTG----TGG---------------AG
A--AAGAGGAGCGGAAAGCCATGGGCCATGCATGATGCTGTCACGCCATGTCAAACATCCTCTCTCTCTCTCTCTCTCTC
TCTGCTGTAGTCGTAGCATTATGCGTTTCATTA----------GGATGGATGGACGGATGG-----ATGGACGGAGG---
-------GACGGCGACGCCGACGTGATGCGC-------------------------------------------CCACTC
GAGTGCTGCTTTCTCCCTT--CCGTTGCGTGCATCTTTCCCGATGGGCTTGCCGCTACTCGATGTGTCCATGTAGTTGGG
AGACTTGTTCCGTGCCTG---------------------------TGGAGCATGCATGAAAAGGAAGGAAGGAAGAAAGC
AGGAGCCATGGCGGTGGTCTCTTGTTCTCTACGACTCCATTGGGACCCCTTTCAAGTTTATCCATTACTACGTA------
---------TACTCTTTGCATGTCTCGTGCTAGCTTATTACGAAGTACGGAAGTAGGGTGTGATTGCGCGCTGATTCTTT
CCGGAATT-GCTGATTGATCAC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr4D_748
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------CCCTTGGCGGGTCACCTCCACCTCCACTGCACCTGCTCTG------------
---TTTTTGCGT-----AGCCAAGCCACCTACTCCCCTTCCAGCGCAAAACAAAAACATTCCCTCCCACCTCTCCCTGCT
CCTCCCG--CTC----TATAAATATAATACTAGCAGCTTCTGCTCTGCTCCTAGCTACTCCTAGTGGTGGTGGCACCGTA
GCACCACCTCAGCTTGAAGGGCGCAAGCAGAG-----CAGAGCTCACTCCGTCCGTCACTGACCGCACCGCTGCGATGAA
GGTAATCTGATG----GACGATACCATGGATCTATGTACCTGCTGCGACCAGTCTATGTCTCTTGCCGCATTTTGGTTCT
CTTCTTAGCTTGTTGCTGATGTGTT--TATACCATGCAGAAGGTGCGGGCGAGGCCGCGGCGGATCCCGGCGTTCGGGGA
GTGGAACTACTACGACGACGGCGGGTACGGAT------ACGGCGACGGCGCCGGCGACTGGCCGGTCACCCAGACCCAGT
ACTTGGACTCCGCCATGCAGGCCGGCATCTTTGTCACACTGCCGGCTTCACCGAAGCCACTCAAAAAGGTGAGTAGTG--
-------------------------------------------------------CA----------------------T
GGATTCTTGCCCTAT-GAGTTTCGTTACTGATTATGTAAGCAACAGAGGACTCCTCCTGCTGATTGCA-----TCACATA
GATTACGACTAAATGAGTGCGGTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTACATGTATAG
AGCGAGCTATTTTATTAC--GTTGAAAAGTTCGGAGCATGGAGTAAAA--------------------------------
-----------------------------GGACTAGTACGAAATACAGTCA-------TGACGTCCAAGAACAAGTCGTT
CACTCTCCCGGTGTGGCAGTAAAAATGTCGTTGTCCTGAAAAGAAAAACAGCGAGCTCTATACATATACAGCTGCTCGCA
GTGGAAATGCTGTTACTTTTTGCTGTAACCTCTGTGCTCGCTGTTACTAGGTGGTGAAGTGGAGCGACAGCGGCACGCTG
GAGGTGGACGGGGAGCAGAGGCAGG------------AGGTGGTGGTGGGGCTGCGCGAAGAGCACGGGACGAAGAAGAA
GGAGGGGAGGGGGAAGCCCATAGAAATTTACCTCAAGGTCCCTCACGCCGCCGACGCCCACCTGAGCACGACCGCAGGCT
ACAACAAAACTTCTCGCAGGGTGCGGGCGGTCAAGGCCGTGGACGAGGACCTCTACGTGATCCCGCCCGACATGCTCTGC
CACAATAA---CCCACGCGTAAGTGACTGACCCCTGGGGCCA-----AAACCTCAAGGATCTGTCGTACGTGTTTACTGC
TTAAAATTATGGCCTTATCTTATTGACAGAAGAATCATCTAGTCCACTACTCGTCCACTGTTTAGCTATGGTCTTATCTT
A-------CTGACGAGTGTTTA-TTGGTTCCTACTGCTGC---AGAAGAGGCTGGCAAAACTGTTTAATTA---------
----GGGTCTTATCTTACTGACGAGTGT-TTTATTCCTGCGTGCAGAAGAGGCTGACGAAAAGGCTGTGGATCGGGTGCC
TGGGCTGCGTCTCCGCCTAGGGATCACAAACCATCTGGCCTTGGCGTGCGTGCGTGCGTCTTGTAAAGAGAGAGAGAGAG
ATGAAGAGGAGCGGAAACCCATGGGGAGGCCATGATGCTGTCACGCCATGTCAAATATCCTTTCTCTCTCGA--------
----CTGTAGTCATAGTATTATGCGTTTTATTA----------GGATGGATGGACGGAC-G-----ATGGACGGAGG---
-------GATGGAGACGGCGACGTGATGCGCGGCA---------------GCGTCATTTCCCCGTGCCAAACGCCCACTC
GAGTGCTGCTTTTCTCCTT--CCACCGTTGCG-TCTTTCCCGATGAGCTTGCCGCTACTCGATGTGTCCATGTAGTTGA-
AGACGACGACGACTACTACTACTCCTGCTTGTGGGCCTGTCGAGCTCGAGCATGCATGAAAAGGAAGGAAG----AAAGC
CGGAGCCATGGCGGGGGCGTCTTGTTCTGTACGACTCCATCCGGATCCCTTTCAAGTTAATCCGTTG-------------
--------TTACTCTTTCCATGTCTTGTGTTAGCTTACGAC-----------CTAGGGTGTGATTGCGCGCTGATTCTTT
CCGGGCCTCGCTGATTGATCACACGATCGCCTCTTTCATTTATGCAAACGCGTGTAGGGTTGTAGCCGGACGGCATCAGC
CTGTCCACGAGCGTTCGCAAAGTCAAGTCAAAAGCATACACTAATCCTCATTACTCTAAGAATTGTGCCAGTTCTAGTTA
TGCTTTT-GTGGACGCTCGTGTCCGCCTGCGTCCCTAAACGTGTGCATGCAACACAACAAGGTTGGAGATGACAACCTTC
ACGCACTTTGCGTTTCAAGACCAAATATTTCTATCTATCAAAAAGTTCCAAAAGGATGCATATAGATATTTGCTAATAAC
CCACTCTTTTTTTTTTTGCGGAAAAACTTTCAATCTATACATTTCAATCATGGCAGTACAACGAATACCAGAAATAAAAA
TTACATCCAGATTCGTAGACCACCTAGCGACAACTACAAGCACCGAAGCGAGCCGAAAGCGCGCCGCCGTCATCGCCCCT
CCATCGCCGGAGCCGGGCACAACTTGTTGTGGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCACCC
CAGAACAACAACCAAGCCGATGAAAAATAACGTAGATCGGAAGGATCCAAACCGAAGACACGAACGTAGACGAACAACGA
CGAGATCCGAGCAAATCCACCAAAGATAGATCTGCCGGAGACACACCTCCACACGCCCACTAACGATGCTAGACGCACTG
CCGGAACGGGGGCTAGGTGGGGAGACCTTTATTCCATCTTCGGGGAGCCGCCGCCGTCTCACCTTCCTGAGTAGGACACA
AACGCTAACAAGATTGAAAAAAAAATGACTAAAAACATAGCCCTCCCGCCGGCCCTTGCCAGGATCCACCGCGCCTCCAT
GGCCCTAGGGCCACCGGAGACGAGGCGGACCTGTGCCGGCGCCGGCGAGAGGCACGAACCCTAACTTTCTTTCTTGGAGG
AGGAGGAGGTGGAGCCCTGGCTCTAGGTACGTGCGTAGTAAATATGTGAATTTGATGTGATATAATGAATAACCCACTCT
TAAATCTTAAGATAATACCATGACGATCTGCAGCGTGCATTAAAATAGAAAACTTAAACTGCAACACTCTTGA-------
----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-S-----SSS---------------
-------S----SSSS--S--S----------S---------------S-------------------------------
-------SSSSSSSSS---S-----------S--S-------SSS--------------------S-----S------SS
S-SSSSSSSSSSSSSSS-S---S-------------S-------------------------------------------
--------------------------------------------------------------------------------
-------------------------SSS--S---------------------------S-S----------------S--
-----S--------------S---------------S-----------------------------S-------------
---------------------------------------------------------------------S----------
-----S-S--------------S--SS-----------------------------------------------------
---------------------S----------SSSSSS----------------S-------------------------
--------------------------------------------S------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
---------------------S---------------------------------S------------S-SSS-------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S---S-S-----------------------S-------S--------S-S-S--------------S-S--
----------------S-------SSSSS--------------------------------------S-------S----
----------------S--------SS-SSSSS-SSSSS-------S---------S-----SS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S------------S----------
--------SS--S-------------------------------------------------------------------
--------SSS--------------S-------S---------S----------------S-------------------
-----------------------SS--------------S-S--------------------S-----------------
-SSSSSSS-------S------S---------S---------------S---------S------SSSS-SSSSSSSSSS
SSSS----------------------------------------------------------------------------
-------------------------SS---------------------------------------------S----S--
--------------------------------------------------------------------------------
------S-----S-----------------S--SSSSSSSSSS-----------S------SSSSS----------SSSS
SSSSSSS----------------------------SSSSSSSSSSSSSSS------------------------------
----------------S-SSS-----------------------------S-----------------------------
----------S----------------------------------------------------S--SS--SS-S-S----
-----------------------------S---------S---S---S------SS-S-----------SSS-SSSSSSS
SSSSSSSS--S------------S--------------------------------------------------------
--------------S-------S--------S---S------------------S-----------------------S-
---------------------------------------------S---------S--S---------S-----------
-------S------------------S---S---------------------------------------S---------
--S--S-----------------------------------------------SS-----------------S-------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------S-S----------------------------------------S---SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CTGCTCTGCTCCTAGCTACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_2769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CGGCTGACACGAGTGTTAGT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>forward_1375
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CGTAC
TGCATGGACTCGTCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_3103
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CTTGATGGACGGAGACGG
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
